Metagenome / Metatranscriptome Family F058885

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058885
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	80 residues
Representative Sequence	VELDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRGELLRFHQTCFAAWDDERQAIGV
Number of Associated Samples	105
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.87 %
% of genes near scaffold ends (potentially truncated)	27.61 %
% of genes from short scaffolds (< 2000 bps)	70.15 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (39.552 % of family members)
Environment Ontology (ENVO)	Unclassified (63.433 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.657 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.00% β-sheet: 25.00% Coil/Unstructured: 35.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF08240	ADH_N	50.00
PF10116	Host_attach	12.69
PF12697	Abhydrolase_6	2.24
PF03460	NIR_SIR_ferr	2.24
PF01042	Ribonuc_L-PSP	2.24
PF01925	TauE	1.49
PF02803	Thiolase_C	0.75
PF00106	adh_short	0.75
PF04116	FA_hydroxylase	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	2.24
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	1.49
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.75
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	64.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.45 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	64.18 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	64.18 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	63.43 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	63.43 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.75 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10496897	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	582	Open in IMG/M
3300002560\|JGI25383J37093_10115873	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	763	Open in IMG/M
3300002562\|JGI25382J37095_10121038	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300002908\|JGI25382J43887_10002729	All Organisms → cellular organisms → Bacteria	7793	Open in IMG/M
3300003203\|JGI25406J46586_10005030	All Organisms → cellular organisms → Bacteria	6140	Open in IMG/M
3300005167\|Ga0066672_10065758	All Organisms → cellular organisms → Bacteria	2129	Open in IMG/M
3300005171\|Ga0066677_10016977	All Organisms → cellular organisms → Bacteria	3293	Open in IMG/M
3300005171\|Ga0066677_10488730	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	707	Open in IMG/M
3300005171\|Ga0066677_10520629	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	683	Open in IMG/M
3300005172\|Ga0066683_10004240	All Organisms → cellular organisms → Bacteria	6722	Open in IMG/M
3300005175\|Ga0066673_10036360	All Organisms → cellular organisms → Bacteria	2404	Open in IMG/M
3300005176\|Ga0066679_10139894	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1507	Open in IMG/M
3300005176\|Ga0066679_10299852	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1044	Open in IMG/M
3300005176\|Ga0066679_10854535	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300005179\|Ga0066684_10041299	All Organisms → cellular organisms → Bacteria	2591	Open in IMG/M
3300005179\|Ga0066684_10206149	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1273	Open in IMG/M
3300005187\|Ga0066675_10049069	All Organisms → cellular organisms → Bacteria	2588	Open in IMG/M
3300005445\|Ga0070708_100400287	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1295	Open in IMG/M
3300005446\|Ga0066686_10050747	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2530	Open in IMG/M
3300005536\|Ga0070697_100130185	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300005536\|Ga0070697_100433198	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1144	Open in IMG/M
3300005552\|Ga0066701_10378942	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	875	Open in IMG/M
3300005554\|Ga0066661_10540588	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	699	Open in IMG/M
3300005556\|Ga0066707_10004920	All Organisms → cellular organisms → Bacteria	5958	Open in IMG/M
3300005559\|Ga0066700_10748217	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	664	Open in IMG/M
3300005560\|Ga0066670_10140468	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1401	Open in IMG/M
3300005561\|Ga0066699_10368976	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300005566\|Ga0066693_10065122	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1250	Open in IMG/M
3300005568\|Ga0066703_10629219	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	623	Open in IMG/M
3300005569\|Ga0066705_10905706	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300005569\|Ga0066705_10905707	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300005574\|Ga0066694_10374470	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	672	Open in IMG/M
3300005576\|Ga0066708_10009361	All Organisms → cellular organisms → Bacteria	4519	Open in IMG/M
3300005576\|Ga0066708_10089533	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1809	Open in IMG/M
3300005576\|Ga0066708_10733321	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	624	Open in IMG/M
3300005586\|Ga0066691_10015993	All Organisms → cellular organisms → Bacteria	3630	Open in IMG/M
3300005586\|Ga0066691_10040396	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2460	Open in IMG/M
3300005598\|Ga0066706_10836727	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	722	Open in IMG/M
3300005985\|Ga0081539_10455443	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300006031\|Ga0066651_10050014	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1952	Open in IMG/M
3300006031\|Ga0066651_10591143	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	590	Open in IMG/M
3300006034\|Ga0066656_10260201	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300006046\|Ga0066652_100019244	All Organisms → cellular organisms → Bacteria → Proteobacteria	4651	Open in IMG/M
3300006049\|Ga0075417_10138371	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1127	Open in IMG/M
3300006791\|Ga0066653_10036874	All Organisms → cellular organisms → Bacteria	1966	Open in IMG/M
3300006796\|Ga0066665_10337628	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300006797\|Ga0066659_10078087	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2187	Open in IMG/M
3300006797\|Ga0066659_10383881	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1100	Open in IMG/M
3300006800\|Ga0066660_11195063	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	597	Open in IMG/M
3300006844\|Ga0075428_100032951	All Organisms → cellular organisms → Bacteria → Proteobacteria	5720	Open in IMG/M
3300006880\|Ga0075429_101754887	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	539	Open in IMG/M
3300006969\|Ga0075419_10591842	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	778	Open in IMG/M
3300007255\|Ga0099791_10183802	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	983	Open in IMG/M
3300009012\|Ga0066710_100140116	All Organisms → cellular organisms → Bacteria → Proteobacteria	3340	Open in IMG/M
3300009012\|Ga0066710_103613531	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	583	Open in IMG/M
3300009137\|Ga0066709_100211962	All Organisms → cellular organisms → Bacteria	2556	Open in IMG/M
3300009147\|Ga0114129_10417470	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1765	Open in IMG/M
3300010145\|Ga0126321_1476850	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	739	Open in IMG/M
3300010303\|Ga0134082_10407118	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	583	Open in IMG/M
3300010321\|Ga0134067_10464300	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	519	Open in IMG/M
3300010322\|Ga0134084_10277379	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	615	Open in IMG/M
3300010333\|Ga0134080_10175084	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	920	Open in IMG/M
3300010336\|Ga0134071_10004781	All Organisms → cellular organisms → Bacteria → Proteobacteria	5151	Open in IMG/M
3300012203\|Ga0137399_10825852	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	780	Open in IMG/M
3300012203\|Ga0137399_11165918	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	649	Open in IMG/M
3300012212\|Ga0150985_101901612	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	599	Open in IMG/M
3300012356\|Ga0137371_10225803	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1464	Open in IMG/M
3300012361\|Ga0137360_10627986	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	920	Open in IMG/M
3300012362\|Ga0137361_10056280	All Organisms → cellular organisms → Bacteria → Proteobacteria	3267	Open in IMG/M
3300012582\|Ga0137358_10110646	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1863	Open in IMG/M
3300012918\|Ga0137396_10131632	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1810	Open in IMG/M
3300012922\|Ga0137394_10081824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2703	Open in IMG/M
3300012922\|Ga0137394_10465775	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1075	Open in IMG/M
3300012922\|Ga0137394_10670915	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	874	Open in IMG/M
3300012925\|Ga0137419_11215372	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	631	Open in IMG/M
3300012927\|Ga0137416_10224777	All Organisms → cellular organisms → Bacteria → Proteobacteria	1520	Open in IMG/M
3300012927\|Ga0137416_11474994	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	617	Open in IMG/M
3300012929\|Ga0137404_10012167	All Organisms → cellular organisms → Bacteria → Proteobacteria	5992	Open in IMG/M
3300012929\|Ga0137404_10631196	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	965	Open in IMG/M
3300012975\|Ga0134110_10214810	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	810	Open in IMG/M
3300012976\|Ga0134076_10171810	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	897	Open in IMG/M
3300012977\|Ga0134087_10353369	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	703	Open in IMG/M
3300014154\|Ga0134075_10001457	All Organisms → cellular organisms → Bacteria	8058	Open in IMG/M
3300014166\|Ga0134079_10086651	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1172	Open in IMG/M
3300015357\|Ga0134072_10107102	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300015372\|Ga0132256_101133328	All Organisms → cellular organisms → Bacteria → Proteobacteria	896	Open in IMG/M
3300015374\|Ga0132255_100574796	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300017656\|Ga0134112_10061847	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300017659\|Ga0134083_10007347	All Organisms → cellular organisms → Bacteria → Proteobacteria	3585	Open in IMG/M
3300018433\|Ga0066667_10007154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	5060	Open in IMG/M
3300018433\|Ga0066667_10045671	All Organisms → cellular organisms → Bacteria	2603	Open in IMG/M
3300018433\|Ga0066667_10147278	All Organisms → cellular organisms → Bacteria	1655	Open in IMG/M
3300018482\|Ga0066669_10008054	All Organisms → cellular organisms → Bacteria	5140	Open in IMG/M
3300018482\|Ga0066669_11288496	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	661	Open in IMG/M
3300019789\|Ga0137408_1113566	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1975	Open in IMG/M
3300019789\|Ga0137408_1113567	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1674	Open in IMG/M
3300020170\|Ga0179594_10025046	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1852	Open in IMG/M
3300026296\|Ga0209235_1010995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5006	Open in IMG/M
3300026296\|Ga0209235_1128765	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1049	Open in IMG/M
3300026298\|Ga0209236_1204220	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	739	Open in IMG/M
3300026300\|Ga0209027_1101176	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300026304\|Ga0209240_1143912	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	759	Open in IMG/M
3300026306\|Ga0209468_1006893	All Organisms → cellular organisms → Bacteria	4334	Open in IMG/M
3300026310\|Ga0209239_1035320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2344	Open in IMG/M
3300026316\|Ga0209155_1041614	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1819	Open in IMG/M
3300026324\|Ga0209470_1019844	All Organisms → cellular organisms → Bacteria	3665	Open in IMG/M
3300026324\|Ga0209470_1362540	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	519	Open in IMG/M
3300026326\|Ga0209801_1037255	All Organisms → cellular organisms → Bacteria	2271	Open in IMG/M
3300026329\|Ga0209375_1057852	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1896	Open in IMG/M
3300026330\|Ga0209473_1071251	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300026330\|Ga0209473_1143414	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	975	Open in IMG/M
3300026523\|Ga0209808_1015925	All Organisms → cellular organisms → Bacteria	3777	Open in IMG/M
3300026527\|Ga0209059_1041806	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2039	Open in IMG/M
3300026528\|Ga0209378_1079943	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300026529\|Ga0209806_1033423	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2535	Open in IMG/M
3300026537\|Ga0209157_1080775	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1596	Open in IMG/M
3300026540\|Ga0209376_1149025	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1123	Open in IMG/M
3300026547\|Ga0209156_10206062	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	935	Open in IMG/M
3300026547\|Ga0209156_10489692	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300026548\|Ga0209161_10198598	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1111	Open in IMG/M
3300026551\|Ga0209648_10005325	All Organisms → cellular organisms → Bacteria → Proteobacteria	11004	Open in IMG/M
3300026551\|Ga0209648_10293314	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1170	Open in IMG/M
3300026552\|Ga0209577_10135216	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1957	Open in IMG/M
3300026557\|Ga0179587_10721420	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	657	Open in IMG/M
3300027643\|Ga0209076_1021025	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1775	Open in IMG/M
3300027655\|Ga0209388_1084696	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	912	Open in IMG/M
3300027748\|Ga0209689_1065400	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1975	Open in IMG/M
3300027873\|Ga0209814_10020726	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2663	Open in IMG/M
3300027880\|Ga0209481_10646406	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300027909\|Ga0209382_10108430	All Organisms → cellular organisms → Bacteria	3248	Open in IMG/M
3300027909\|Ga0209382_10312719	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1769	Open in IMG/M
3300031716\|Ga0310813_10040075	All Organisms → cellular organisms → Bacteria	3384	Open in IMG/M
3300032180\|Ga0307471_100203382	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1984	Open in IMG/M
3300032180\|Ga0307471_101333493	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	879	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.55%
Host-Associated	Host-Associated	10.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.81%
Plants	Host-Associated → Plants	10.45%
Aquatic	Environmental → Aquatic	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.99%
Freshwater	Environmental → Aquatic → Freshwater	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.09%
Loam	Environmental → Terrestrial → Soil → Loam	6.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.49%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	53.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.49%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	39.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	14.18%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.24%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.49%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.49%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_104968972	3300001661	Forest Soil	VDLDRIRTMIREKLESGQLPPEKCLITWFGPGSGQHCVACELVIGPQEIECECEHPRGELLRFHQTCFGAWDDERQAIGV*
JGI25383J37093_101158732	3300002560	Grasslands Soil	VELNGLRALVRDKLQRGDLPREKCLITWFGPGSGQRCVVCDRAIGSSDIECECDHPRGDVLRFHQTCFAAWDETRQAVGV*
JGI25382J37095_101210382	3300002562	Grasslands Soil	VNLDGVRLLAREKLERGDLPREKCLITWFGPGSGQRCVVCTTIIQQADVECECEHPRGAVIRFHQVCFSAWDDERQAIGV*
JGI25382J43887_100027297	3300002908	Grasslands Soil	VELNGLRALVRDKLQRGDLPREKCLITWFGPGSGQRCVVCDXAIGSSDIECECDHPRGDVLRFHQTCFAAWVETRQAVGV*
JGI25406J46586_100050305	3300003203	Tabebuia Heterophylla Rhizosphere	VNPERIRAVVRAMLDRGDLPLEKCFITWFGPGTGERCVVCGAVITAADIECECDHPRDGLLRFHQACFAAWDEARQDMAPA*
Ga0066672_100657584	3300005167	Soil	VDLDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACEGVIGPQEIECECEHPRRELLRFHQTCFAAWDAERQAIRV*
Ga0066677_100169774	3300005171	Soil	VNLDRIRAVVREKLDSGDLPPEKCFITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMTPA*
Ga0066677_104887301	3300005171	Soil	VDLDRIRLVVREKLDRGELPPEKCVITWFGPGSGQRCVVCDRAIRPSEIECECEHPRGGLMRFHQACFAAWDEARPDMAPA*
Ga0066677_105206291	3300005171	Soil	ARGGGTVDLDRIRTMIREKLESGELPPEKCLITWFGPGSGQRCVACEGVIGPQEIECECEHPRRELLRFHQTCFAAWDAERQAIGV*
Ga0066683_100042406	3300005172	Soil	VNLDRIRAVVREKLDSGDLPPEKCFITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA*
Ga0066673_100363602	3300005175	Soil	VELDRIRTMIREKLESGQLPPEKCMITWFGPGSDQRCVACELVIAPQEIECECEHPRGELLRFHQTCFAAWDDARQAIGV*
Ga0066679_101398942	3300005176	Soil	VDLDRIRTMIREKLETGQLPPEKCLITWFGPGSGQRCVACERVIGPQETECECEHPRRELLRFHQTCFAAWDDERQAIGV*
Ga0066679_102998521	3300005176	Soil	LDRIRTMIREKLESGQLPPEKCMITWFGPGSGQRCVACERVIGPQEIECECEHPRGELLRFHQTCFAAWDDERQAIGV*
Ga0066679_108545351	3300005176	Soil	VDLDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACEGVIGPQEIECECEHPRRELLRFHQTCFAAWDAERQAIGV*
Ga0066684_100412994	3300005179	Soil	VSLDRIRAVVREKLDSGDLPSEKCFITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA*
Ga0066684_102061492	3300005179	Soil	VELDRIRTMIREKLESGQLPPEKCMITWFGPGSGQRCVACERVIAPQEIECECEHPRGELLRFHQTCFAAWDDARQAIGV*
Ga0066675_100490691	3300005187	Soil	VNLDRIRAAVREKLDSGDLPPEKCLITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA*
Ga0070708_1004002872	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VDLDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACERVIGPQETECECEHPRGELLRFHQACFAAWDAERQAIGV*
Ga0066686_100507473	3300005446	Soil	VNLDRIRAAVREKLDSGDLPPEKCFITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA*
Ga0070697_1001301855	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VDLDRIRTMIREKLESGRLPSEKCLITWFGPGSGQRCVACERMIGPQEIECECEHPRRELLRFHQTCFAVWDDARQAIGV*
Ga0070697_1004331982	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VDLDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACERVIGPHETECECEHPRGELLRFHQACFAAWDAERQAIGV*
Ga0066701_103789422	3300005552	Soil	TVNLDRIRAVVREKLDSGDLPPEKCFITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA*
Ga0066661_105405882	3300005554	Soil	VELDRIRTMIREKLESGQLPPEKCMITWFGPGSGQRCVACERVIAPQEIECECEHPRGELLRFHQTCFAAWDDERQAIGV*
Ga0066707_100049203	3300005556	Soil	VDLDRIRTMIREKLESGQLPPEKCLITWFGAGSGQRCVACEGVIGPQEIECECEHPRRELLRFHQTCFAAWDAERQAIRV*
Ga0066700_107482172	3300005559	Soil	VRDKLQRGDLPREKCLITWFGPGSGQRCVVCDRAIGSSDIECECDHPRGDVLRFHQTCFAAWDETRQAVGV*
Ga0066670_101404681	3300005560	Soil	VDLDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACEGVIGPQEIECECEHPRRELLRFHQTCFAAWD
Ga0066699_103689762	3300005561	Soil	VELDRIRTMIREKLETGQLPPEKCLITWFGPGSGQRCVACERVIGPQETECECEHPRRELLRFHQTCFAAWDDERQAIGV*
Ga0066693_100651222	3300005566	Soil	WHPVRNCAGTVNLDRIRAVVREKLDSGDLPPEKCFITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA*
Ga0066703_106292191	3300005568	Soil	KNQARGGGTVELDRIRTMIREKLESGQLPPEKCMITWFGPGSGQRCVACERVIAPQEIECECEHPRGELLRFHQTCFAAWDDERQAIGV*
Ga0066705_109057061	3300005569	Soil	ARGGGTVELDRIRTMIREKLESGQLPPEKCMITWFGPGSGQRCVACERVIAPQEIECECEHPRGELLRFHQTCFAAWDDERQAIGV*
Ga0066705_109057071	3300005569	Soil	ARGGGTVELDRIRTMIREKLESGQLPPEKCMITWFGPGSDQRCVACELVIAPQEIECECEHPRGELLRFHQTCFAAWDDARQAIGV*
Ga0066694_103744702	3300005574	Soil	VDLDRIRAMIREKLESGQLPPEKCLITWFGAGSGQRCVACEGVIGPQEIECECEHPRRELLRFHQTCFAAWDAERQAIRV*
Ga0066708_100093615	3300005576	Soil	VNLDRIRAVVREKLDSGDLPPEKCLITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA*
Ga0066708_100895334	3300005576	Soil	VDLDRIRTMIREKLESGQLPPEKCLITWFGAGSGQRCVACEGVIGPQEIECECEHPRRELLRFHQTCFAAWD
Ga0066708_107333212	3300005576	Soil	VELDRIRTMIREKLESGQLPPEKCMITWFGPGSGQRCVACERVIGPQETECECEHPRRELLRFHQTCFAAWDDERQAIGV*
Ga0066691_100159935	3300005586	Soil	VRDKLQRGDLPREKCLITWFGPGSGQRCVVCDRAIGVLGIECECDHPRGDVLRFHQTCFAAWDETRQAVGV*
Ga0066691_100403964	3300005586	Soil	MVDLDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACERVIGPQETECECEHPRRELLRFHQTCFAAWDDERQAIGV*
Ga0066706_108367271	3300005598	Soil	ARGGGTVDLDRIRTMIREKLETGQLPPEKCLITWFGPGSGQRCVACERVIGPQETECECEHPRRELLRFHQTCFAAWDDERQAIGV*
Ga0081539_104554431	3300005985	Tabebuia Heterophylla Rhizosphere	RWHRVRRIRVEAYHNSREDRTVNLDSIRAVVRAMLDRGDLPLEKCFITWFGPGTGEPCVVCGTVITPADIECECEHPRGGLLRFHQTCFAAWDDARQDMAPA*
Ga0066651_100500141	3300006031	Soil	REKLESGQLPPEKCMITWFGPGSDQRCVACELVIAPQEIECECEHPRGELLRFHQTCFAAWDDARQAIGV*
Ga0066651_105911432	3300006031	Soil	VDLDRIRTMIREKLESGQLPPEKCLITWFGAGSGQRCVACEGVIGPQEIECECEHPRRELLRFHQTCFAAWDAERQAIGV*
Ga0066656_102602012	3300006034	Soil	VDLDRIRAVVREKLDRGELPAEKCFITWFGPGAGQLCIVCEQVITPSDIECECEHPRGGLMRFHQACFAVWDEARQDMAPA*
Ga0066652_1000192442	3300006046	Soil	VNLDRIRTAVREKLDSGDLPPEKCLITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA*
Ga0075417_101383712	3300006049	Populus Rhizosphere	VNLERIRAVVRDMLDRGDLPLEKCLLTWFGPGTGERCVVCGAVITAADIECECEHPRDGLLRFHQACFAAWDEARQDMAPA*
Ga0066653_100368742	3300006791	Soil	MVDLDRIRTMIREKLESGQLPPEKCMITWFGPGSDQRCVACELVIAPQEIECECEHPRGELLRFHQTCFAAWDDARQAIGV*
Ga0066665_103376282	3300006796	Soil	VDLDRIRTMIREKLETGQLPPEKCLITWFGPGSGQRCVACERVIGPQETECECEHPRRELLRFHQTCFAAWDAERQAIRV*
Ga0066659_100780875	3300006797	Soil	VDLDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRRELLRFHQTCFAAWDAERQAIRV*
Ga0066659_103838812	3300006797	Soil	HGFRRHVARVTRASRWHPVRNCAGTVNLDRIRAAVREKLDSGDLPPEKCFITWFGPGSGQLCVVCERVIAASDIECECEHPRGGLMRFHQACFAAWDEARQDMAPA*
Ga0066660_111950632	3300006800	Soil	VELDRIRTMIREKLESGQLPPEKCLITWFGPGLGQRCVACEGVIGPQEIECECEHPGGELLRFHQTCFAAWDDERQTIGVWPRPSLALPLHPRPQGELS*
Ga0075428_1000329512	3300006844	Populus Rhizosphere	VNPDTIRAVVQEKLDRGDLPPEKCFITWFGPGSGQTCVVCDRVIARADIECECEHPRGGLMRFHQACFAAWDDARQDMAPA*
Ga0075429_1017548871	3300006880	Populus Rhizosphere	NLERIRAVVRDMLDRGDLPLEKCLLTWFGPGTGERCVVCGAVITAADIECECEHPRDGLLRFHQACFAAWDEARQDMAPA*
Ga0075419_105918421	3300006969	Populus Rhizosphere	TVNLERIRAVVRDMLDRGDLPLEKCLLTWFGPGTGERCVVCGAVITAADIECECEHPRDGLLRFHQACFAAWDEARQDMAPA*
Ga0099791_101838022	3300007255	Vadose Zone Soil	VDLDRIRTMIREKLESGRLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRGELLRFHQTCFAAWDDERQAIGV*
Ga0066710_1001401161	3300009012	Grasslands Soil	VELDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRRELLRFHQTCFAAWDDERQ
Ga0066710_1036135312	3300009012	Grasslands Soil	VRTVNLDRIRAAVREKLDSGDLPPEKCLITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA
Ga0066709_1002119622	3300009137	Grasslands Soil	VELDRIRTMIREKLESGQLPPEKCMITWFGPGSGQPCVACERVIGPQEIECECEHPRRELLRFHQTCFAAWDDERQTIGV*
Ga0114129_104174701	3300009147	Populus Rhizosphere	VNLDRIRAVVREKLDSGDLPPEKCLITWFGPGSGQLCVVCERAIPPSEIECECEHPRGGVMRFHQACFAVWDETRQDMAPA*
Ga0126321_14768502	3300010145	Soil	RTVNLDRIRTVVRAKLDSGDLPPEKCFITWFGPGSGQLCVVCDQVIAPAEIECECEHPRGGLMRFHQACFAAWDEARQDMAPA*
Ga0134082_104071181	3300010303	Grasslands Soil	VELDRIRTMIREKLESGQLPPEKCMITWFGPGSGQRCVACERVIAPQEIECECEHPRGELLRFHQTCFAAWDDERQTIGV*
Ga0134067_104643002	3300010321	Grasslands Soil	VDLDRIRTMIREKLESGQLPPEKCMITWFGPGSGQRCVACERVIAPQEIECECEHPRGELLRFHQTCFAAWDDARQAIGV*
Ga0134084_102773792	3300010322	Grasslands Soil	TVNLDRIRAVVREKLDSGDLPPEKCLITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA*
Ga0134080_101750841	3300010333	Grasslands Soil	SGDLPPEKCFITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA*
Ga0134071_100047814	3300010336	Grasslands Soil	VDLDRIRAVVREKLDRGELPTEKCFITWFGPGAGQLCIVCERVITPSDIECECEHPRGGLMRFHQACFAVWDEARQDMAPA*
Ga0137399_108258521	3300012203	Vadose Zone Soil	KAGKRGWAVELDRVRVTVREKLERGEVPREKCLITWFGPGSGQRCVVCDQVIRQVEVECECEHPRGDILRFHQTCFVAWDEARQEMV*
Ga0137399_111659182	3300012203	Vadose Zone Soil	VELDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRGELLRFHQTCFAAWDDERQVIGV*
Ga0150985_1019016121	3300012212	Avena Fatua Rhizosphere	AVREKLESGDLPPEKCLITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA*
Ga0137371_102258032	3300012356	Vadose Zone Soil	VDLDRIRLVVREKLDRGELPPEKCVITWFGPGSGQRCVVCDRAIRPSEIECECEHPRGGLMRFHQACFAAWDEARQDMAPA*
Ga0137360_106279862	3300012361	Vadose Zone Soil	MVDLDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRRELLRFHQTCFAAWDDERQAIGV*
Ga0137361_100562802	3300012362	Vadose Zone Soil	VDLDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRRELLRFHQTCFAAWDDERQAIGV*
Ga0137358_101106462	3300012582	Vadose Zone Soil	MIREKLESGQLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRGELLRFHQTCFAAWDDERQAIGV*
Ga0137396_101316322	3300012918	Vadose Zone Soil	MEVNVDLDRARTLAREKLERGDLPHEKCVITWFGPGSGQRCVVCEATIERADVECECEHPRGGVIRFHQTCFVAWDDARQAIGV*
Ga0137394_100818242	3300012922	Vadose Zone Soil	VDLDRVRVAVREKLERGEMPREKCLITWFGPGSGQPCVVCDQVIRRSEVECECEHPRGGVLRLHQSCFVAWDDARQAMV*
Ga0137394_104657752	3300012922	Vadose Zone Soil	VNLDRARTLAREKLERGELPQEKCQITWFGPGSGQRCVVCATIIQPADIECECEHPRGGVIRFHQVCFTAWDDERQAIGV*
Ga0137394_106709151	3300012922	Vadose Zone Soil	VDLDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRGELLRFHQTCFAA
Ga0137419_112153722	3300012925	Vadose Zone Soil	VDLDRIRTMIREKLESGRLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRGELLRFHQTCFAAWDDERQA
Ga0137416_102247772	3300012927	Vadose Zone Soil	VDLDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRGELLRFHQTCFAAWDDERQVIGV*
Ga0137416_114749941	3300012927	Vadose Zone Soil	VELDRVRVTVREKLERGEVPREKCLITWFGPGSGQRCVVCDQVIRQVEVECECEHPRGDILRFHQTCFVAWDEARQEMV*
Ga0137404_100121676	3300012929	Vadose Zone Soil	VDLDRVRVAVREKLERGEMPREKCLITWFGPGSGQPCVVCDQVIRRSEVECECEHPRGGVLRLHQWCFVAWDDARQAMV*
Ga0137404_106311962	3300012929	Vadose Zone Soil	VDLDRIRAVVREKLDRGELPAEKCFITWFGPGAGQLCIVCERVITPSDIECECEHPRGGLLRFHQACFAVWDEARQDMAPA*
Ga0134110_102148101	3300012975	Grasslands Soil	VELDRIRTMIREKLESGQLPPEKCMITWFGPGSGQPCVACERVIGPQEIECECEHPRRELLRFHQTCF
Ga0134076_101718101	3300012976	Grasslands Soil	VDLDRIRAVVREKLDRGELPAEKCFITWFGPGAGQLCIVCERVITPSDIECECEHPRGGLMRFHQACFAVWDEARQDMAPA*
Ga0134087_103533692	3300012977	Grasslands Soil	VDLDRIRTMIREKLETGQLPPEKCLITWFGPGSGQRCVACEGVIGPQEIECECEHPRRELLRFHQTCFAAWDDERQAIGV*
Ga0134075_100014575	3300014154	Grasslands Soil	VDLDRIRAVVREKLDRGELPTEKCFITWFGPGAGQLCIVCEQVITPSDIECECEHPRGGLMRFHQACFAVWDEARQDMAPA*
Ga0134079_100866511	3300014166	Grasslands Soil	VELDRIRTMIREKLESGQLPPEKCMITWFGPGSGQPCVACERVIGPQEIECECEHPRRELLRFHQTCFAAWDDARQAIGV*
Ga0134072_101071022	3300015357	Grasslands Soil	VELDRIRTMIREKLESGQLPPEKCMITWFGPGSGQPCVACERVIGPQEIECECEHPRRELLRFHQTCFAAWDAERQAIGV*
Ga0132256_1011333282	3300015372	Arabidopsis Rhizosphere	VDVEQIRVIVRTKLVRDELPSEKCLVTWFGPGSGQRCVVCERTIAPSEIECECEHPRGGVIRFHQACFAVWDHARIDMTPA*
Ga0132255_1005747962	3300015374	Arabidopsis Rhizosphere	VDVEQIRVIVRTKLDRDELPSEKCLVTWFGPGSGQRCVVCERTIAPSEIECECEHPRGGVIRFHQACFAVWDHARIDMTPA*
Ga0134112_100618472	3300017656	Grasslands Soil	VDLDRIRAVVREKLDRGELPTEKCFITWFGPGAGQLCIVCEQVITPSDIECECEHPRGGLMRFHQACFAVWDEARQDMAPA
Ga0134083_100073477	3300017659	Grasslands Soil	VDLDRIRAVVREKLDRGELPAEKCFITWFGPGAGHLCIVCERVITPSDIECECEHPRGGLLRFHQACFAVWDEARQDMAPA
Ga0066667_100071543	3300018433	Grasslands Soil	VNLDRIRAAVREKLDSGDLPPEKCFITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA
Ga0066667_100456715	3300018433	Grasslands Soil	VDLDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACEGVIGPQEIECECEHPRRELLRFHQTCFAAWDAERQAIRV
Ga0066667_101472782	3300018433	Grasslands Soil	VDLDRIRTMIREKLETGQLPPEKCLITWFGPGSGQRCVACERVIGPQETECECEHPRRELLRFHQTCFAAWDDERQAIGV
Ga0066669_100080547	3300018482	Grasslands Soil	VNLDRIRAAVREKLDSGDLPPEKCLITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA
Ga0066669_112884962	3300018482	Grasslands Soil	VELDRIRTMIREKLESGQLPPQKCMITWFGPGSGQRCVACERVIAPQEIECECEHPRGELLRFHQTCFAAWDDARQAIGV
Ga0137408_11135664	3300019789	Vadose Zone Soil	VDLDRIRAVVREKLDRGELPAEKCFITWFGPGAGQLCIVCERVITPSDIECECEHPRGGLLRFHQACFA
Ga0137408_11135671	3300019789	Vadose Zone Soil	VDLDRIRAVVREKLDRGELPAEKCFITWFGPGAGQLCIVCERVITPSDIECECEHPRGGLLRFHQACFAVW
Ga0179594_100250463	3300020170	Vadose Zone Soil	VDLDRIRAVVREKLDRGELPAEKCFITWFGPGAGQLCIVCERVITPSDIECECEHPRGGLLRFHQACFAVWDEARQDMAPA
Ga0209235_10109956	3300026296	Grasslands Soil	VELNGLRALVRDKLQRGDLPREKCLITWFGPGSGQRCVVCDRAIGSSDIECECDHPRGDVLRFHQTCFAAWDETRQAVGV
Ga0209235_11287652	3300026296	Grasslands Soil	VNLDGVRLLAREKLERGDLPREKCLITWFGPGSGQRCVVCTTIIQQADVECECEHPRGAVIRFHQVCFSAWDDERQAIGV
Ga0209236_12042202	3300026298	Grasslands Soil	AVVREKLDRGELPAEKCFITWFGPGAGQLCIVCERVITPSDIECECEHPRGGLLRFHQACFAVWDEARQDMAPA
Ga0209027_11011762	3300026300	Grasslands Soil	VELDRIRTMIREKLESGQLPPEKCMITWFGPGSGQRCVACERVIGPQETECECEHPRRELLRFHQTCFAAWDDERQAIGV
Ga0209240_11439122	3300026304	Grasslands Soil	VDLDRIKTMIREKLESGQLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRGELLRFHQTCFAAWDDERQAIGV
Ga0209468_10068932	3300026306	Soil	VNLDRIRAVVREKLDSGDLPPEKCFITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA
Ga0209239_10353201	3300026310	Grasslands Soil	SHPLAKRRRLEVGQVELNGLRALVRDKLQRGDLPREKCLITWFGPGSGQRCVVCDRAIGSSDIECECDHPRGDVLRFHQTCFAAWDETRQAVGV
Ga0209155_10416143	3300026316	Soil	VELDRIRTMIREKLESGQLPPEKCMITWFGPGSDQRCVACELVIAPQEIECECEHPRGELLRFHQTCFAAWDDARQAIGV
Ga0209470_10198444	3300026324	Soil	VNLDRIRAAVREKLESGDLPPEKCFITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA
Ga0209470_13625402	3300026324	Soil	VDLDRIRAVVREKLDRGELPAEKCFITWFGPGAGQLCIVCERVITPSDIECECEHPRGGLMRFHQACFAVWDEAR
Ga0209801_10372552	3300026326	Soil	VDLDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACEGVIGPQEIECECEHPRRELLRFHQTCFAAWDAERQAIGV
Ga0209375_10578524	3300026329	Soil	VNLDRIRAVVREKLDSGDLPPEKCFITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMA
Ga0209473_10712512	3300026330	Soil	VELDRIRTMIREKLESGQLPPEKCMITWFGPGSGQRCVACERVIAPQEIECECEHPRGELLRFHQTCFAAWDDARQAIGV
Ga0209473_11434142	3300026330	Soil	VNLDRIRAAVREKLDSGDLPPEKCLITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQA
Ga0209808_10159254	3300026523	Soil	VDLDRIRTMIREKLESGQLPPEKCLITWFGAGSGQRCVACEGVIGPQEIECECEHPRRELLRFHQTCFAAWDAERQAIRV
Ga0209059_10418061	3300026527	Soil	NQARGGGTVDLDRIRTMIREKLETGQLPPEKCLITWFGPGSGQRCVACERVIGPQETECECEHPRRELLRFHQTCFAAWDDERQAIGV
Ga0209378_10799432	3300026528	Soil	VDLDRIRTMIREKLESGQLPPEKCLITWFGAGSGQRCVACEGVIGPQEIECECEHPRRELLRFHQTCFAAWDAERQAIGV
Ga0209806_10334232	3300026529	Soil	VDLDRIRTMIREKLESGQLPPEKCMITWFGPGSGQRCVACERVIAPQEIECECEHPRGELLRFHQTCFAAWDDERQAIGV
Ga0209157_10807751	3300026537	Soil	VDLDRIRAVVREKLDRGELPAEKCFITWFGPGAGQLCIVCEQVITPSDIECECEHPRGGLMRFHQACFAVWDEARQ
Ga0209376_11490251	3300026540	Soil	VNLDRIRAVVREKLDSGDLPPEKCLITWFGPGSGQLCVVCERVIAAADVECECEHPRGGLMRFHQACFAAWDEARQDMAPA
Ga0209156_102060621	3300026547	Soil	GRWHPVRNGARTVNLDRIRAVVREKLDSGDLPPEKCLITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA
Ga0209156_104896922	3300026547	Soil	VDLDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACEGVIGPQEIECECEHPRRELLRFHQTCFAAWDAERQAVRV
Ga0209161_101985981	3300026548	Soil	RIRAVVREKLDSGDLPPEKCFITWFGPGSGQLCVVCERVIAAADIECECEHPRGGLMRFHQACFAAWDEARQDMAPA
Ga0209648_100053254	3300026551	Grasslands Soil	VDLDRIKTMIREKLESGQLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRGALLRFHQTCFAAWDDERQAIGV
Ga0209648_102933141	3300026551	Grasslands Soil	IREKLESGRLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRGELLRFHQTCFAAWDDERQAIGV
Ga0209577_101352161	3300026552	Soil	VELDRIRTMIREKLETGQLPPEKCLITWFGPGSGQRCVACERVIGPQETECECEHPRRELLRFHQTCFAAWDDERQAIGV
Ga0179587_107214201	3300026557	Vadose Zone Soil	VELDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRGELLRFHQTCFAAWDDERQAIGV
Ga0209076_10210253	3300027643	Vadose Zone Soil	VDLDRIRTMIREKLESGRLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRGELLRFHQTCFAAWDDERQAIGV
Ga0209388_10846962	3300027655	Vadose Zone Soil	VDLDRIRTMIREKLESGRLPPEKCLITWFGPGSGQRCVACERVIGPQEIECECEHPRGELLRFHQTCFVAWDDERQAIGV
Ga0209689_10654001	3300027748	Soil	MVDLDRIRTMIREKLESGQLPPEKCLITWFGPGSGQRCVACERVIGPQETECECEHPRRELLRFHQTCFAAWDDERQAIGV
Ga0209814_100207263	3300027873	Populus Rhizosphere	VNLERIRAVVRDMLDRGDLPLEKCLLTWFGPGTGERCVVCGAVITAADIECECEHPRDGLLRFHQACFAAWDDARQDMAPA
Ga0209481_106464061	3300027880	Populus Rhizosphere	VNLDRIRAVVREKLDSGDLPPEKCLITWFGPGSGQLCVVCERAIPPSEIECECEHPRGGVMRFHQACFAVWDETRQDMAPA
Ga0209382_101084306	3300027909	Populus Rhizosphere	VNLERIRAVVRDMLDRGDLPLEKCLLTWFGPGTGERCVVCGAVITAADIECECEHPRDGLLRFHQACFAAWDEARQDMAPA
Ga0209382_103127192	3300027909	Populus Rhizosphere	VNPDTIRAVVQEKLDRGDLPPEKCFITWFGPGSGQTCVVCDRVIARADIECECEHPRGGLMRFHQACFAAWDDARQDMAPA
Ga0310813_100400753	3300031716	Soil	VDVEQIRVIVRTKLDRDELPSEKCSVTWFGPGSGQRCVVCERTIAPSEIECECEHPRGGVIRFHQACFAVWDHTRIDMTPA
Ga0307471_1002033823	3300032180	Hardwood Forest Soil	VDLDRIRTMIREKLESGQLPPQKCMITWFGPGSGQRCVACERVIGPHETECECEHPRGELLRFHQACFAAWDAERQAIGV
Ga0307471_1013334932	3300032180	Hardwood Forest Soil	VDLDRIRTMIREKLESGRLPSEKCLITWFGPGSGQRCVACERMIGPQEIECECEHPRRELLRFHQTCFAVWDDARQAIGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058885

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences