NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F058889

Metagenome / Metatranscriptome Family F058889

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F058889
Family Type Metagenome / Metatranscriptome
Number of Sequences 134
Average Sequence Length 56 residues
Representative Sequence PHLAAAQALVLMVAYLGLESLIATSAPPLGADEPALRERWKEAAVRLVLDGVAAH
Number of Associated Samples 110
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.24 %
% of genes near scaffold ends (potentially truncated) 97.76 %
% of genes from short scaffolds (< 2000 bps) 83.58 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.254 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(26.866 % of family members)
Environment Ontology (ENVO) Unclassified
(52.239 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.955 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 51.81%    β-sheet: 0.00%    Coil/Unstructured: 48.19%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF05362Lon_C 38.06
PF06452CBM9_1 2.99
PF00069Pkinase 1.49
PF13620CarboxypepD_reg 0.75
PF00004AAA 0.75
PF05592Bac_rhamnosid 0.75
PF07676PD40 0.75
PF00440TetR_N 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 134 Family Scaffolds
COG0466ATP-dependent Lon protease, bacterial typePosttranslational modification, protein turnover, chaperones [O] 38.06
COG1067Predicted ATP-dependent proteasePosttranslational modification, protein turnover, chaperones [O] 38.06
COG1750Predicted archaeal serine protease, S18 familyGeneral function prediction only [R] 38.06
COG3480Predicted secreted protein YlbL, contains PDZ domainSignal transduction mechanisms [T] 38.06
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 5.97
COG3408Glycogen debranching enzyme (alpha-1,6-glucosidase)Carbohydrate transport and metabolism [G] 0.75

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.25 %
UnclassifiedrootN/A0.75 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001661|JGI12053J15887_10220569All Organisms → cellular organisms → Bacteria954Open in IMG/M
3300002561|JGI25384J37096_10026619All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2255Open in IMG/M
3300002561|JGI25384J37096_10150780All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium743Open in IMG/M
3300002908|JGI25382J43887_10464820All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300002916|JGI25389J43894_1105531All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium509Open in IMG/M
3300004480|Ga0062592_101986830All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300005166|Ga0066674_10182984All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes995Open in IMG/M
3300005172|Ga0066683_10175474All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1320Open in IMG/M
3300005172|Ga0066683_10572206All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes688Open in IMG/M
3300005174|Ga0066680_10037077All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2796Open in IMG/M
3300005176|Ga0066679_10019599All Organisms → cellular organisms → Bacteria3558Open in IMG/M
3300005180|Ga0066685_10585124All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium768Open in IMG/M
3300005181|Ga0066678_10350276All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes974Open in IMG/M
3300005181|Ga0066678_10664393All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium694Open in IMG/M
3300005440|Ga0070705_101560519All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium554Open in IMG/M
3300005549|Ga0070704_100051895All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2891Open in IMG/M
3300005552|Ga0066701_10012607All Organisms → cellular organisms → Bacteria3932Open in IMG/M
3300005554|Ga0066661_10353005All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium900Open in IMG/M
3300005554|Ga0066661_10368116All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium879Open in IMG/M
3300005557|Ga0066704_10438171All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium864Open in IMG/M
3300005561|Ga0066699_10649070All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium756Open in IMG/M
3300005566|Ga0066693_10010055All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2642Open in IMG/M
3300005586|Ga0066691_10773710All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300005598|Ga0066706_10048109All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium bavaricum2863Open in IMG/M
3300006031|Ga0066651_10039868All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2153Open in IMG/M
3300006031|Ga0066651_10367400All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium770Open in IMG/M
3300006791|Ga0066653_10002293All Organisms → cellular organisms → Bacteria5755Open in IMG/M
3300006791|Ga0066653_10605583All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes557Open in IMG/M
3300006794|Ga0066658_10101767All Organisms → cellular organisms → Bacteria1362Open in IMG/M
3300006806|Ga0079220_11432444All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium588Open in IMG/M
3300006844|Ga0075428_100326795All Organisms → cellular organisms → Bacteria1648Open in IMG/M
3300009012|Ga0066710_102338481All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes776Open in IMG/M
3300009012|Ga0066710_102441393All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium757Open in IMG/M
3300009012|Ga0066710_102510686All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium745Open in IMG/M
3300009038|Ga0099829_10707278All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium837Open in IMG/M
3300009089|Ga0099828_10498404All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1098Open in IMG/M
3300009090|Ga0099827_10185940All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1721Open in IMG/M
3300009137|Ga0066709_100293191All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2205Open in IMG/M
3300010085|Ga0127445_1035617All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300010120|Ga0127451_1066684All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300010132|Ga0127455_1140211All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300010304|Ga0134088_10128062All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1203Open in IMG/M
3300010322|Ga0134084_10281693All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium611Open in IMG/M
3300010325|Ga0134064_10141954All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300010335|Ga0134063_10130441All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1156Open in IMG/M
3300010336|Ga0134071_10320212All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium780Open in IMG/M
3300010373|Ga0134128_11253074All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300010401|Ga0134121_10747611All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium933Open in IMG/M
3300011269|Ga0137392_10162366All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1810Open in IMG/M
3300011269|Ga0137392_10415408All Organisms → cellular organisms → Bacteria1117Open in IMG/M
3300011438|Ga0137451_1115565All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300012198|Ga0137364_10006625All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis6321Open in IMG/M
3300012198|Ga0137364_10393553All Organisms → cellular organisms → Bacteria1037Open in IMG/M
3300012199|Ga0137383_10097342All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2135Open in IMG/M
3300012199|Ga0137383_11036895All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes596Open in IMG/M
3300012202|Ga0137363_10705384All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes854Open in IMG/M
3300012203|Ga0137399_10238026All Organisms → cellular organisms → Bacteria1490Open in IMG/M
3300012203|Ga0137399_10593806All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes931Open in IMG/M
3300012206|Ga0137380_11632388All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes529Open in IMG/M
3300012207|Ga0137381_10238886All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1578Open in IMG/M
3300012209|Ga0137379_10047036All Organisms → cellular organisms → Bacteria4163Open in IMG/M
3300012209|Ga0137379_10918356All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium780Open in IMG/M
3300012211|Ga0137377_10127327All Organisms → cellular organisms → Bacteria2431Open in IMG/M
3300012349|Ga0137387_10610285All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium791Open in IMG/M
3300012349|Ga0137387_11164456All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes546Open in IMG/M
3300012350|Ga0137372_10357547All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1116Open in IMG/M
3300012353|Ga0137367_10563961All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium799Open in IMG/M
3300012359|Ga0137385_10177190All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium bavaricum1868Open in IMG/M
3300012360|Ga0137375_10350259All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1311Open in IMG/M
3300012362|Ga0137361_10155014All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2050Open in IMG/M
3300012363|Ga0137390_10169262Not Available2172Open in IMG/M
3300012371|Ga0134022_1050640All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300012380|Ga0134047_1007314All Organisms → cellular organisms → Bacteria1385Open in IMG/M
3300012386|Ga0134046_1146163All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300012392|Ga0134043_1100594All Organisms → cellular organisms → Bacteria1423Open in IMG/M
3300012392|Ga0134043_1146895All Organisms → cellular organisms → Bacteria1209Open in IMG/M
3300012396|Ga0134057_1160692All Organisms → cellular organisms → Bacteria2740Open in IMG/M
3300012402|Ga0134059_1179892All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300012922|Ga0137394_10201707All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1699Open in IMG/M
3300012923|Ga0137359_11719118All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300012925|Ga0137419_10271130All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1287Open in IMG/M
3300012927|Ga0137416_11450907All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes622Open in IMG/M
3300012971|Ga0126369_12387610All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter cryoconiti615Open in IMG/M
3300012972|Ga0134077_10318757All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium656Open in IMG/M
3300012972|Ga0134077_10544451All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium519Open in IMG/M
3300012976|Ga0134076_10147204All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium963Open in IMG/M
3300014154|Ga0134075_10021112All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2593Open in IMG/M
3300014154|Ga0134075_10088005All Organisms → cellular organisms → Bacteria1307Open in IMG/M
3300014154|Ga0134075_10407508All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300015054|Ga0137420_1229143All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1320Open in IMG/M
3300015054|Ga0137420_1342817All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1752Open in IMG/M
3300015357|Ga0134072_10042969All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1230Open in IMG/M
3300017654|Ga0134069_1017884All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2109Open in IMG/M
3300017654|Ga0134069_1090594All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium992Open in IMG/M
3300017656|Ga0134112_10121535All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium992Open in IMG/M
3300017659|Ga0134083_10350021All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium636Open in IMG/M
3300017942|Ga0187808_10453288All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300018012|Ga0187810_10146322All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium bavaricum947Open in IMG/M
3300018053|Ga0184626_10275599All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300018431|Ga0066655_11226818All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes533Open in IMG/M
3300018433|Ga0066667_10293451All Organisms → cellular organisms → Bacteria1260Open in IMG/M
3300018482|Ga0066669_11116647All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium711Open in IMG/M
3300019265|Ga0187792_1321871All Organisms → cellular organisms → Bacteria1126Open in IMG/M
3300019265|Ga0187792_1664125All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300019869|Ga0193705_1005196All Organisms → cellular organisms → Bacteria2849Open in IMG/M
3300019882|Ga0193713_1078463All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300021086|Ga0179596_10650571All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300021972|Ga0193737_1008594All Organisms → cellular organisms → Bacteria1381Open in IMG/M
3300025289|Ga0209002_10308696All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes928Open in IMG/M
3300025535|Ga0207423_1013016All Organisms → cellular organisms → Bacteria1308Open in IMG/M
3300025910|Ga0207684_10212102All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1670Open in IMG/M
3300025922|Ga0207646_10155913All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2060Open in IMG/M
3300026295|Ga0209234_1111433All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1022Open in IMG/M
3300026297|Ga0209237_1082692All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1465Open in IMG/M
3300026314|Ga0209268_1116090All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes684Open in IMG/M
3300026317|Ga0209154_1071197All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1511Open in IMG/M
3300026324|Ga0209470_1095956All Organisms → cellular organisms → Bacteria1337Open in IMG/M
3300026326|Ga0209801_1031723All Organisms → cellular organisms → Bacteria2496Open in IMG/M
3300026328|Ga0209802_1188678All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium811Open in IMG/M
3300026328|Ga0209802_1264744All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300026329|Ga0209375_1086560All Organisms → cellular organisms → Bacteria1438Open in IMG/M
3300026333|Ga0209158_1267846All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300026333|Ga0209158_1312648All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300026530|Ga0209807_1157456All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium858Open in IMG/M
3300027181|Ga0208997_1066014All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium541Open in IMG/M
3300027643|Ga0209076_1046394All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1227Open in IMG/M
3300027875|Ga0209283_10629493All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes677Open in IMG/M
3300027882|Ga0209590_10285026All Organisms → cellular organisms → Bacteria1059Open in IMG/M
3300027882|Ga0209590_10601873All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium707Open in IMG/M
3300027954|Ga0209859_1074688All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300030998|Ga0073996_12202041All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300031720|Ga0307469_12534976All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300031908|Ga0310900_11961162All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium500Open in IMG/M
3300032157|Ga0315912_11012731All Organisms → cellular organisms → Bacteria660Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil26.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil23.13%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil19.40%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil9.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.99%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.99%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.49%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.49%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland1.49%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.49%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.75%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.75%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.75%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.75%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.75%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.75%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.75%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002916Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cmEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010085Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010120Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010132Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011438Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012371Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012380Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012386Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012392Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012396Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012402Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019265Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021972Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2EnvironmentalOpen in IMG/M
3300025289Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2EnvironmentalOpen in IMG/M
3300025535Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027181Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027954Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300030998Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12053J15887_1022056913300001661Forest SoilDDLDPHLAAAQALILMVGYLSMETVIATSARPLGADEPSLRERWREAAVDLVVAGVSAS*
JGI25384J37096_1002661923300002561Grasslands SoilAAQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKEGAVRLVLDGVAAH*
JGI25384J37096_1015078023300002561Grasslands SoilGQVRDDLDPHLAAAQALVLMVAYLGLESLIAMSAPPLGADEPALRERWKEAAVRLVLDGVAAH*
JGI25382J43887_1046482023300002908Grasslands SoilDLDPHLTAAQALVLLVGYLQLESAIAASAPVLGADEPALRERWKEGAVALIVNGVRAV*
JGI25389J43894_110553123300002916Grasslands SoilAAAQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKEGAVRLVLDGVAAH*
Ga0062592_10198683013300004480SoilGLGEVRDDLDPHLAAAQALVLMIAYLGLEPLIFASAPSLSNEERALPERWKDAALRLVLEGVAVR*
Ga0066674_1018298413300005166SoilQVRDDLDPHLAAAQALVLMVAYLNLEPLIAANAPPLGADEPGLRDRWKEAAVKLVLEGVTAH*
Ga0066683_1017547423300005172SoilAQALVLMVAYLGLESLIAMSAPPLGADEPSLRERWKEAAVRLVLDGIAAR*
Ga0066683_1057220613300005172SoilAAAQALVLMVAYLGLESLIAMSAGPLSADEPALRERWKDAAVRLVLDGVAAH*
Ga0066680_1003707723300005174SoilDDLDPHLAAAQALVLMVAYLGLESLIAMSAPPLGADEPALRERWKEAAVRLILEGVATRQTPSTS*
Ga0066679_1001959933300005176SoilLAAAQALVLMVAYLGLESLIAASAPPLGADEPALRERWKEAAVKLVLEGVRA*
Ga0066685_1058512413300005180SoilVRDDLDPHLAAAQALVLMVAYLGLESLIAMSAPPLGADEPALRERWKEAAVRLVLDGIAAR*
Ga0066678_1035027613300005181SoilDDLDPHLAAAQALVLMVAYLGLESLIAMSAPPLGADEPALRERWKEAAVRLVLDGIAAR*
Ga0066678_1066439323300005181SoilDPHLAAAQALVLMVAYLGLESLIAASAPPLGADEPALRERWKEAAVKLVLEGVAAR*
Ga0070705_10156051913300005440Corn, Switchgrass And Miscanthus RhizosphereDDLDPHLAAAQALVLMVAYLGLESLIAVSAPPLGADEPALRERWKDAAVRLVLEGVAAR*
Ga0070704_10005189513300005549Corn, Switchgrass And Miscanthus RhizosphereLVLMVAYLGLESLIAMSAAPLGADEPALRERWKEAAVRLVLDGVAAH*
Ga0066701_1001260713300005552SoilAQALVLMVAYLGLESLIAMSAPPLGADEPALRERWKEAAVRLVLDGIAAR*
Ga0066661_1035300523300005554SoilVRDDVDPHLAAAQALVLMVAYLGLESLIATSAPPLGADEPALRERWKEAAVRLVLDGVAAH*
Ga0066661_1036811623300005554SoilAAAQALVLMVAYLGLESLIATSAPPLGADEPALRERWKEAAVRLVLDGVAAH*
Ga0066704_1043817123300005557SoilAAAQALVLMVAYLGLESLIAMSAPPLGADEPALRERWKEAAVKLVLDGVSAH*
Ga0066699_1064907013300005561SoilAAQALVLMVAYLGLESLIATSAPPLGADEPALRERWKEAAVRLVLDGVAAH*
Ga0066693_1001005513300005566SoilRGQVRDDLDPHLAAAQALVLMVAYLGLESLIATSAAPLGADEPALRERWKEAAVRLVLDGVAAH*
Ga0066691_1077371023300005586SoilVTAAQALVLMVAYLQLESLIAASAAPLGADEPTLRERWKEAAVDLVVNGVRAVSS*
Ga0066706_1004810923300005598SoilVTAAQALVLMVAYLHLESLIAASAAPLGADEATLRERWKEAAVDLVVNGVRAVSS*
Ga0066651_1003986823300006031SoilAAQALMLMVSYLGLESLIAVSAPPLGADEPALRERWKDAAVRLVLDGVATRPTSPTS*
Ga0066651_1036740013300006031SoilVRDDLDPHLAAAQALILMVGYLSMEGVIAASARTLDEPALRERWREAAVDLVVNGVRAA*
Ga0066653_1000229313300006791SoilQVRDDLDPHLTAAQALVLLVGYLQLESAIAASAPVLGADEPALRERWKAGAVSLMVNGVRAT*
Ga0066653_1060558323300006791SoilDVDPHLAAAQALVLMVAYLGLESLIAASAPPLGADEPALRERWKEAAVKLVLEGVRA*
Ga0066658_1010176723300006794SoilDPHLTAAQALVLLVGYLQLESAIAASAPVLGADEPALRERWKEGAVALIVNGVRAV*
Ga0079220_1143244423300006806Agricultural SoilAAAQALILMVAYLGLESLIAMSAPPLGADEPALRERWKEAAVRLVLDGVAAH*
Ga0075428_10032679513300006844Populus RhizosphereHLAAAQAVVLMVAYLRLESLIAASAPPLGADESTLRERWKRAAVDLIVNGVRA*
Ga0066710_10233848123300009012Grasslands SoilDDLDPHLAAAQALVLMVAYLGLESLIAASAAPLGADEPALRERWKDAAVRLVVEGVATR
Ga0066710_10244139323300009012Grasslands SoilVRDDVDPHLAAAQALVLMVAYLGLESLIAASAPPLGADEPALRERWKEAAVKLVLEGVRA
Ga0066710_10251068623300009012Grasslands SoilAQALVLMVAYLGLESLIATSAPPLGADEPALRERWKEAAVRVVLDGVAAH
Ga0099829_1070727823300009038Vadose Zone SoilAAAQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKEAAVRLVLDGVAAH*
Ga0099828_1049840413300009089Vadose Zone SoilAAQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKEAAVRLVLDGIAAR*
Ga0099827_1018594013300009090Vadose Zone SoilPHLAAAQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKEAAVRLVLDGVAGH*
Ga0066709_10029319123300009137Grasslands SoilAAAQALVLMVAYLGLESLIAASAPPLGADEPALRERWKEAAVKLVLEGVAAR*
Ga0127445_103561713300010085Grasslands SoilLDPHVTAAQALVLMVAYLHLELLIAASAAPLGADEPSLRERWKEAAVDLVVNGVRAVSS*
Ga0127451_106668423300010120Grasslands SoilDPHLTAAQALVLLVGYLQLESAIAASAPVLGADEPALRERWKEGAVSLIVNGVRAT*
Ga0127455_114021123300010132Grasslands SoilGQVRDDLDPHVTAAQALVLMVAYLQLESLIAASEAPLGADEPTLRERWKEAAVDLVVNGVRAVSS*
Ga0134088_1012806223300010304Grasslands SoilDLDPHLAAAQALMLMVSYLGLESLIAVSAPPLGADEPALRERWKDAAVRLVLDGVATRPTPPTS*
Ga0134084_1028169323300010322Grasslands SoilVRDDVDPHVAAAQALVLMVAYLGLESLIATSAPPLGADEPALRERWKDAAVRLVLDGVAAH*
Ga0134064_1014195413300010325Grasslands SoilHLTAAQALVLLVGYLQLESAIAASAPVLGADEPALRERWKAGAVSLMVNGVRAT*
Ga0134063_1013044113300010335Grasslands SoilPHLAAAQALVLMVAYLGLESLIATSAPPLGADEPALRERWKEAAVRLVLDGVAAH*
Ga0134071_1032021213300010336Grasslands SoilPHLAAAQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKEGAVRLVLDGVAAH*
Ga0134128_1125307413300010373Terrestrial SoilPHLTAAQSLVLMVGYLGMESVIAASARPLGADEPALRERWKEAAVDLVVAGVAAR*
Ga0134121_1074761113300010401Terrestrial SoilDLDPHLAAAQALVLMVAYLGLESLIAMSAPPLGADEPTLRERWKEAAVRLVLDGIAAR*
Ga0137392_1016236623300011269Vadose Zone SoilVDPHLTAAQALILMVGYLQLESVVAASAPLLGADEQSLRQRWKEAAVQLVVAGVATR*
Ga0137392_1041540813300011269Vadose Zone SoilQALVLMVAYLGLESLIATSAPPLGADEPALRQRWKDAAVRLVLDGVAAH*
Ga0137451_111556523300011438SoilDLDPHLAAAQALVLMIAYLGLESLIATSARPLGSDEPALAQRWKDAALRLVLEGVSAR*
Ga0137364_1000662513300012198Vadose Zone SoilDDLDPHLAAAQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKEAAVRLVLDGVAAH*
Ga0137364_1039355323300012198Vadose Zone SoilDDLDPHLTAAQALVLLVGYLQLESAIAASTPVLGGDEPALRERWKEGAVSLVVNGVRAT*
Ga0137383_1009734223300012199Vadose Zone SoilPHLAAAQALVLMVAYLGLESLIATSAPPLGADEPTLRERWKDAAVRLVVEGVAAR*
Ga0137383_1103689523300012199Vadose Zone SoilPHLAAAQALVLMVAYLGLESLIATSAPPLGADEPTLRERWKEAAVRLVLDGVAAH*
Ga0137363_1070538423300012202Vadose Zone SoilAAAQALVLMVAYLGLESLIAMSAPPLGADEPALRERWKEAAVRLVLDGIAAR*
Ga0137399_1023802623300012203Vadose Zone SoilRDDLDPHLAAAQALILMVGYLSMEAVIATSARPLGADEPSLRARWREAAVDLVVAGVSAS
Ga0137399_1059380613300012203Vadose Zone SoilDDLDPHLAAAQALVLMVAYLGLESLIAMSAPPLGADEPALRERWKDAAVRLVLDGIAAR*
Ga0137380_1163238823300012206Vadose Zone SoilLVLMVAYLGLESLIAMSAPPLGADEPSLRERWKEAAVRLILEGVATRQTPSTS*
Ga0137381_1023888623300012207Vadose Zone SoilALVLMVAYLGLESLIAMSAPPLGADEPALRERWKEAAVRLVLDGIAAR*
Ga0137379_1004703613300012209Vadose Zone SoilAAAQALVLMVAYLGLESLIAASAAPLGADEPALRERWKDAAVRLVLDGVAAH*
Ga0137379_1091835613300012209Vadose Zone SoilQVRDDLDPHLAAAQALVLMVAYLGLESLIAMIAAPLGADEPALRERWKEGAVRLVLDGVAAH*
Ga0137377_1012732713300012211Vadose Zone SoilQVRDDVDPHLTAAQALVLMIAYLGLESLIAASAPSLGSDEPALSRRWKDAAVRLVLEGVAAR*
Ga0137387_1061028513300012349Vadose Zone SoilGRGQVRDDLDPHLAAAQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKEGAVRLVLDGVAAH*
Ga0137387_1116445623300012349Vadose Zone SoilRDDLDPHLAAAQALVLMVAYLGLESLIAMSAPPLGADEPALRERWKEAAVRLVLDGVAAH
Ga0137372_1035754723300012350Vadose Zone SoilRGRVRDDVDPHLAAAQALVLMVAYLGLESLIATSAPPLGADEPALRERWKDAAVRLVLDGVAAH*
Ga0137367_1056396123300012353Vadose Zone SoilPHLTAAQALVLMVAYLGLESLIAASAPPLGADEPALRERWKEAAVRLVLDGVAAH*
Ga0137385_1017719013300012359Vadose Zone SoilHLTAAQALVLLVGYLQLESAIAASAPVLGADEPALRERWKEGAVSLIVNGVRAT*
Ga0137375_1035025913300012360Vadose Zone SoilLVLMVAYLNLEPLIAMSAAPLGADEPALRERWKDAAVTLVLEGVTS*
Ga0137361_1015501423300012362Vadose Zone SoilGQVRDDLDPHLAAAQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKEGAVRLVLDGVAAH*
Ga0137390_1016926223300012363Vadose Zone SoilDDVDPHLTAAQALILMVGYLQLESVVAASAPPLGADEQSLRQRWKEAAVQLVVAGVATR*
Ga0134022_105064023300012371Grasslands SoilQGLGQVRDDLDPHLTAAQALVLLVGYLQLESAIAASAPVLGADEPALRERWKAGAVSLMVNGVRAT*
Ga0134047_100731413300012380Grasslands SoilQALILMVGYLSMEAVIATSAPPLGADEPSLRERWREAAVDLVVAGVSAN*
Ga0134046_114616323300012386Grasslands SoilAAQALVLLVGYLQLESAIAASAPVLGADEPALRERWKEGAVSLIVNGVRAT*
Ga0134043_110059433300012392Grasslands SoilQGLGEVRDDLDPHVTAAQALVLMVAYLHLELLIAASAAPLGADEPTLRERWKEAAVDLVVNGVRAVSS*
Ga0134043_114689513300012392Grasslands SoilQALVLLVGYLQLESAIAASAPVLGADEPALRERWKEGAVSLIVNGVRAT*
Ga0134057_116069223300012396Grasslands SoilEVRDDLDPHVTAAQALVLMVAYLQLESLIAASAAPLGADEPTLRERWKEAAVDLVVNGVRAVSS*
Ga0134059_117989213300012402Grasslands SoilQALVLMVAYLQLESLIAASAAPLGADEPTLRERWKEAAVDLVVNGVRAVSS*
Ga0137394_1020170723300012922Vadose Zone SoilDDLDPHLAAAQALVLMVGYLKLEELIAASAPPLGADEPALRERWKHAAVELVVNGVRVA*
Ga0137359_1171911813300012923Vadose Zone SoilHLAAAQALVLMIAYLGLESLIAASAPPLGSDESALAQRWKDAALRLVLEGVSVR*
Ga0137419_1027113013300012925Vadose Zone SoilPHLAAAQALVLMVAYLGLESLIAMSAPPLGADEPALRERWKDAAVRLVLDGIAAR*
Ga0137416_1145090713300012927Vadose Zone SoilPHLAAAQALVLMVAYLGLESLIAMSAPPLGADEPALRERWKEAAVRLVLEGIAAR*
Ga0126369_1238761013300012971Tropical Forest SoilDPHVAAAQALILMLGYLRLEPIIAASAPPLAADEPALRERWRRAAVELVVNGVRAG*
Ga0134077_1031875723300012972Grasslands SoilVDPHLAAAQALVLMVAYLGLESLIAASAPPLGADEPALRERWKEAAVKLVLEGVAAR*
Ga0134077_1054445113300012972Grasslands SoilRDDLDPHLAAAQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKEGAVRLVLDGVAAH
Ga0134076_1014720413300012976Grasslands SoilQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKEGAVRLVLDGVAAH*
Ga0134075_1002111213300014154Grasslands SoilVRDDLDPHLAAAQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKEAAVRLVLDGVAAH*
Ga0134075_1008800513300014154Grasslands SoilDLDPHLAAAQALVLMVGYLGLESLIAASAAPLGSDEPALSRRWKDAAVRLMIEGVAAPRP
Ga0134075_1040750813300014154Grasslands SoilAQALVLLVGYLQLESAIAASTPVLGGDEPALRERWKEGAVALIVNGVRAG*
Ga0137420_122914313300015054Vadose Zone SoilRCATTSTRIWPPRAAQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKEAAVRLVLDGIAAR*
Ga0137420_134281713300015054Vadose Zone SoilAGAGADGLLMVAYLGLESLIAMSAAPLGADEPALRERWKEAAVRLVLDGIAAR*
Ga0134072_1004296923300015357Grasslands SoilMVAYLGLESLIAMSAPPLGADEPSLRERWKEAAVRLILEGVATRQTPSTS*
Ga0134069_101788423300017654Grasslands SoilAQALVLMVAYLGLESLIAMSAPPLGADEPALRERWKEAAVRLVLDGIAAR
Ga0134069_109059423300017654Grasslands SoilQVRDDLDPHLAAAQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKEGAVRLVLDGVAAH
Ga0134112_1012153513300017656Grasslands SoilAQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKDAAVRLVLDGIAAR
Ga0134083_1035002123300017659Grasslands SoilPHLAAAQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKEGAVRLVLDGVAAH
Ga0187808_1045328813300017942Freshwater SedimentDVDPHIAAAQALVLMLAYLALEPLVASSAAALGGDEPGLATRWKDAAVRLVVEGLAAR
Ga0187810_1014632213300018012Freshwater SedimentIAAAQALVLMLAYLALEPLVASSAAALGGDEPGLATRWKDAAVRLVVEGLAAR
Ga0184626_1027559913300018053Groundwater SedimentDPHLAAAQALVLMVGYLGMESAIAASARPLGADEPALRERWKEAAVDLVVAGVAAR
Ga0066655_1122681813300018431Grasslands SoilVRDDLDPHLAAAQALVLMVAYLGLESLIAASAPPLGADEPALRERWKEAAVRLVLDGVAA
Ga0066667_1029345113300018433Grasslands SoilVRDDLDPHVTAAQALVLMVAYLQLELLIAASAAPLGADEPSLRERWKEAAVDLVVNGVRAVSS
Ga0066669_1111664713300018482Grasslands SoilAQALVLMVAYLGLESLIATSAPPLGADEPALRERWKEAAVRLVLDGVAAH
Ga0187792_132187113300019265PeatlandHVTAAQALVLMIAYLGLEPLIAASAAPLATDEVALPDRWRDAAVRLVIEGVAAR
Ga0187792_166412523300019265PeatlandALVLMVAYLGMEPLIAASAAPLGSDETSLPDRWKDATVRLVLEGVGSR
Ga0193705_100519623300019869SoilLDPHLAAAQALVLMVGYLGMESAIAASARPLGADEPALRERWKEAAVDLVVAGVAAR
Ga0193713_107846313300019882SoilQALLLMIAYVGLEPLIATSAPQLGNDESTLSQRWKDAALKLVLEGVSAR
Ga0179596_1065057123300021086Vadose Zone SoilALVLMIAYLGLESLIAASAPPLGSDESALAQRWKDAALRLVLEGVSVR
Ga0193737_100859423300021972SoilDVDPHLTAAQALVLMVGYLGMESAIAASARPLGADEPALRERWKEAAVDLVVAGVAAH
Ga0209002_1030869613300025289SoilHLAAAQALVLMVAYLGLESLIAASAPPLGADEPALRERWKDAAVQLVLEGVATR
Ga0207423_101301613300025535Natural And Restored WetlandsAAAQALVLMLGYLRLEPMIAASAPPLTGDAPALRARWMRAAVDLYVAGVRAG
Ga0207684_1021210223300025910Corn, Switchgrass And Miscanthus RhizosphereDPHLAAAQALVLMVAYLGLEPLIAASAPPLGADEPALRERWREAAVRLVLQGVMAR
Ga0207646_1015591313300025922Corn, Switchgrass And Miscanthus RhizosphereDDLDPHLAAAQALVLMVAYLGLESLIAMSAAPLGADEPALRERWKEAAVKLVVNGVRAG
Ga0209234_111143313300026295Grasslands SoilAAAQALVLMVAYLGLESLIAMSAPPLGADEPALRERWKEAAVRLILEGVATRQTPSTS
Ga0209237_108269213300026297Grasslands SoilHLAAAQALVLMVAYLGLESLIAMSAPPLGADEPALRERWKEAAVRLILEGVATRQTPSTS
Ga0209268_111609013300026314SoilPHLAAAQALMLMVSYLGLESLIAVSAPPLGADEPALRERWKDAAVRLVLDGVATRPTSPT
Ga0209154_107119713300026317SoilQALVLMVAYLGLESLIATSAPPLGADEPALRERWKEAAVRLVLDGVAAH
Ga0209470_109595623300026324SoilRDDLDPHVTAAQALVLMVAYLQLESLIAASAAPLGADEPTLRERWKEAAVDLVVNGVRAVSS
Ga0209801_103172313300026326SoilPHVTAAQALVLMVAYLQLESLIAASAAPLGADEPTLRERWKEAAVDLVVNGVRAVSS
Ga0209802_118867823300026328SoilDVDPHLAAAQALVLMVAYLGLESLIAASAAPLGADEPALRERWKDAAVRLVLDGVAAH
Ga0209802_126474423300026328SoilLTAAQALVLLVGYLQLESAIAASAPVLGADEPALRERWKEGAVALIVNGVRAV
Ga0209375_108656013300026329SoilLAAAQALVLMVGYLGLESLIAASAAPLGSDEPALSRRWKDAAVRLMIEGVAAPRP
Ga0209158_126784623300026333SoilLTAAQALVLLVGYLQLESAIAASAPVLGADEPALRERWKEGAVSLIVNGVRSS
Ga0209158_131264813300026333SoilVTAAQALVLMVAYLQLESLIAASAAPLGADEPTLRERWKDAAVDLVVNGVRAVSS
Ga0209807_115745623300026530SoilHLAAAQALVLMVAYLGLESLIATSAPPLGADEPALRERWKEAAVRLVLDGVAAH
Ga0208997_106601423300027181Forest SoilDLDPHLAAAQALVLMVAYLGLESLIAASARPLGADEPTLRERWKEAAVRLVLDGVAAH
Ga0209076_104639423300027643Vadose Zone SoilWDDVDPHLAAAQALVLMVAYLGLESLIAASAPPLGADEPALRERWKEAAVKLVLEGVRA
Ga0209283_1062949323300027875Vadose Zone SoilVDLDPHLAAAQALVLMVAYLGLESLIAMSAPPLGADEPALRERWKEAAVRLVLDGIAAR
Ga0209590_1028502623300027882Vadose Zone SoilHLTAAQALVLMVGYLQLESVVAASAPPLGADEPALRERWKDASVELVVAGVAAR
Ga0209590_1060187313300027882Vadose Zone SoilAAQALVLMVGYLKLEDLVAASAPPLGADEPALRGRWKQGAVDLVLGGVAAR
Ga0209859_107468813300027954Groundwater SandRDDLDPHLAAAQALILMVGYLSMEAVVAASARPLGADEPALRERWREAAVDLVVTGVSAS
Ga0073996_1220204123300030998SoilLDPHLAAAQALVLMIAYPGLESLIAASAPSLSSDEPALSRRWKDAALRLVLEGVSVH
Ga0307469_1253497613300031720Hardwood Forest SoilPHLAAAQALVLMVAYLGLEPLIATSAPPLGADEPALRERWKEAAVRLVLDGVAAH
Ga0310900_1196116213300031908SoilAAAQALVLMVAYLGLESLIAVSAPPLGADEPALRERWKDAAVRLVLEGVAAR
Ga0315912_1101273123300032157SoilPHLAAAQALVLMLAYLGLESLIATSARPLGSDEPALAERWKDAALRLVLEGVTAR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.