NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F058913

Metagenome Family F058913

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F058913
Family Type Metagenome
Number of Sequences 134
Average Sequence Length 47 residues
Representative Sequence MKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQ
Number of Associated Samples 57
Number of Associated Scaffolds 134

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 82.09 %
% of genes near scaffold ends (potentially truncated) 23.13 %
% of genes from short scaffolds (< 2000 bps) 80.60 %
Associated GOLD sequencing projects 49
AlphaFold2 3D model prediction Yes
3D model pTM-score0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (69.403 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(41.045 % of family members)
Environment Ontology (ENVO) Unclassified
(88.806 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(99.254 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.67%    β-sheet: 0.00%    Coil/Unstructured: 49.33%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 134 Family Scaffolds
PF00145DNA_methylase 8.96
PF10979DUF2786 5.22
PF00436SSB 0.75
PF14105DUF4278 0.75
PF03237Terminase_6N 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 134 Family Scaffolds
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 8.96
COG0629Single-stranded DNA-binding proteinReplication, recombination and repair [L] 0.75
COG2965Primosomal replication protein NReplication, recombination and repair [L] 0.75


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A69.40 %
All OrganismsrootAll Organisms30.60 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001954|GOS2235_1029731Not Available1433Open in IMG/M
3300001956|GOS2266_1053034All Organisms → cellular organisms → Bacteria1753Open in IMG/M
3300001961|GOS2240_1001090Not Available1518Open in IMG/M
3300001961|GOS2240_1025281All Organisms → cellular organisms → Bacteria2069Open in IMG/M
3300001961|GOS2240_1029907Not Available1424Open in IMG/M
3300001969|GOS2233_1078369All Organisms → cellular organisms → Bacteria1933Open in IMG/M
3300001972|GOS2216_10126155Not Available1211Open in IMG/M
3300002033|GOS24894_10027535Not Available883Open in IMG/M
3300002482|JGI25127J35165_1018882Not Available1681Open in IMG/M
3300002482|JGI25127J35165_1028442Not Available1295Open in IMG/M
3300002482|JGI25127J35165_1032956Not Available1180Open in IMG/M
3300002482|JGI25127J35165_1036587Not Available1104Open in IMG/M
3300002482|JGI25127J35165_1049531Not Available913Open in IMG/M
3300002482|JGI25127J35165_1079008All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300002482|JGI25127J35165_1083870Not Available654Open in IMG/M
3300002482|JGI25127J35165_1087413Not Available637Open in IMG/M
3300002482|JGI25127J35165_1106727Not Available561Open in IMG/M
3300002483|JGI25132J35274_1024067All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.1419Open in IMG/M
3300002483|JGI25132J35274_1038889Not Available1057Open in IMG/M
3300002483|JGI25132J35274_1043695Not Available983Open in IMG/M
3300005606|Ga0066835_10091348Not Available964Open in IMG/M
3300006749|Ga0098042_1048445Not Available1158Open in IMG/M
3300006916|Ga0070750_10063552All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1762Open in IMG/M
3300006919|Ga0070746_10235294Not Available860Open in IMG/M
3300007112|Ga0101560_1107220Not Available553Open in IMG/M
3300007154|Ga0101548_1033075Not Available932Open in IMG/M
3300007748|Ga0105545_1018315Not Available1103Open in IMG/M
3300009550|Ga0115013_10001050Not Available16243Open in IMG/M
3300009593|Ga0115011_10077126Not Available2316Open in IMG/M
3300009790|Ga0115012_10420158All Organisms → Viruses → Predicted Viral1030Open in IMG/M
3300009790|Ga0115012_11501917Not Available579Open in IMG/M
3300010148|Ga0098043_1136085Not Available701Open in IMG/M
3300012919|Ga0160422_10128260All Organisms → cellular organisms → Bacteria1508Open in IMG/M
3300012919|Ga0160422_10208335Not Available1185Open in IMG/M
3300012919|Ga0160422_10210355Not Available1180Open in IMG/M
3300012919|Ga0160422_10212487All Organisms → cellular organisms → Bacteria1174Open in IMG/M
3300012919|Ga0160422_10452943Not Available804Open in IMG/M
3300012919|Ga0160422_10857185Not Available584Open in IMG/M
3300012920|Ga0160423_10057939All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon2798Open in IMG/M
3300012920|Ga0160423_10175631Not Available1497Open in IMG/M
3300012920|Ga0160423_10377345All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300012920|Ga0160423_10803170Not Available633Open in IMG/M
3300012928|Ga0163110_10001483All Organisms → cellular organisms → Bacteria11940Open in IMG/M
3300012928|Ga0163110_11502023Not Available547Open in IMG/M
3300012936|Ga0163109_10177682All Organisms → cellular organisms → Bacteria1563Open in IMG/M
3300012952|Ga0163180_10000574Not Available21390Open in IMG/M
3300012952|Ga0163180_11351600All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.589Open in IMG/M
3300012954|Ga0163111_12185080Not Available560Open in IMG/M
3300012954|Ga0163111_12581611Not Available518Open in IMG/M
3300020246|Ga0211707_1021089Not Available913Open in IMG/M
3300020265|Ga0211533_1049345Not Available705Open in IMG/M
3300020269|Ga0211484_1010448All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon2010Open in IMG/M
3300020281|Ga0211483_10129739Not Available834Open in IMG/M
3300020297|Ga0211490_1002487All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium5244Open in IMG/M
3300020299|Ga0211615_1033883All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon753Open in IMG/M
3300020299|Ga0211615_1054577Not Available609Open in IMG/M
3300020377|Ga0211647_10162418Not Available736Open in IMG/M
3300020380|Ga0211498_10172919Not Available816Open in IMG/M
3300020393|Ga0211618_10043397All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1760Open in IMG/M
3300020393|Ga0211618_10074685All Organisms → Viruses → Predicted Viral1250Open in IMG/M
3300020397|Ga0211583_10109198Not Available1036Open in IMG/M
3300020404|Ga0211659_10005223All Organisms → cellular organisms → Bacteria6776Open in IMG/M
3300020409|Ga0211472_10043787Not Available1742Open in IMG/M
3300020410|Ga0211699_10251340Not Available682Open in IMG/M
3300020410|Ga0211699_10471248Not Available500Open in IMG/M
3300020418|Ga0211557_10485986Not Available539Open in IMG/M
3300020433|Ga0211565_10000323All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium26489Open in IMG/M
3300020433|Ga0211565_10295580Not Available706Open in IMG/M
3300020436|Ga0211708_10062759All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1436Open in IMG/M
3300020436|Ga0211708_10121835Not Available1029Open in IMG/M
3300020436|Ga0211708_10210270Not Available783Open in IMG/M
3300020436|Ga0211708_10275116Not Available683Open in IMG/M
3300020436|Ga0211708_10325567Not Available627Open in IMG/M
3300020436|Ga0211708_10368820Not Available588Open in IMG/M
3300020437|Ga0211539_10402286Not Available571Open in IMG/M
3300020439|Ga0211558_10273241Not Available795Open in IMG/M
3300020442|Ga0211559_10028474All Organisms → Viruses → Predicted Viral2798Open in IMG/M
3300020442|Ga0211559_10091179Not Available1472Open in IMG/M
3300020442|Ga0211559_10124027Not Available1238Open in IMG/M
3300020470|Ga0211543_10249342All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium870Open in IMG/M
3300020471|Ga0211614_10021829All Organisms → Viruses → Predicted Viral2659Open in IMG/M
3300020471|Ga0211614_10186669Not Available896Open in IMG/M
3300020471|Ga0211614_10458194Not Available565Open in IMG/M
3300020474|Ga0211547_10113245Not Available1419Open in IMG/M
3300021554|Ga0224713_1192469Not Available932Open in IMG/M
3300025101|Ga0208159_1002377All Organisms → cellular organisms → Bacteria6576Open in IMG/M
3300025127|Ga0209348_1000384Not Available23843Open in IMG/M
3300025127|Ga0209348_1003732All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium6839Open in IMG/M
3300025127|Ga0209348_1007938All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon4386Open in IMG/M
3300025127|Ga0209348_1011083All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes3607Open in IMG/M
3300025127|Ga0209348_1012837All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Libanvirus → unclassified Libanvirus → Cyanophage P-RSM63289Open in IMG/M
3300025127|Ga0209348_1033887Not Available1814Open in IMG/M
3300025127|Ga0209348_1034212All Organisms → Viruses → Predicted Viral1803Open in IMG/M
3300025127|Ga0209348_1037603All Organisms → Viruses → Predicted Viral1696Open in IMG/M
3300025127|Ga0209348_1038594Not Available1667Open in IMG/M
3300025127|Ga0209348_1042786All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.1564Open in IMG/M
3300025127|Ga0209348_1043935All Organisms → Viruses → Predicted Viral1538Open in IMG/M
3300025127|Ga0209348_1045327All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales1507Open in IMG/M
3300025127|Ga0209348_1071328Not Available1124Open in IMG/M
3300025127|Ga0209348_1071608Not Available1121Open in IMG/M
3300025127|Ga0209348_1071829Not Available1119Open in IMG/M
3300025127|Ga0209348_1087333Not Available986Open in IMG/M
3300025127|Ga0209348_1092085Not Available953Open in IMG/M
3300025127|Ga0209348_1098185Not Available914Open in IMG/M
3300025127|Ga0209348_1103065Not Available884Open in IMG/M
3300025127|Ga0209348_1114637Not Available824Open in IMG/M
3300025127|Ga0209348_1126304Not Available771Open in IMG/M
3300025127|Ga0209348_1131956Not Available748Open in IMG/M
3300025127|Ga0209348_1145198Not Available701Open in IMG/M
3300025127|Ga0209348_1154589Not Available671Open in IMG/M
3300025127|Ga0209348_1215364Not Available528Open in IMG/M
3300025127|Ga0209348_1215642Not Available527Open in IMG/M
3300025151|Ga0209645_1009123All Organisms → Viruses → Predicted Viral4060Open in IMG/M
3300025151|Ga0209645_1028844Not Available2053Open in IMG/M
3300025151|Ga0209645_1097603All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.957Open in IMG/M
3300025151|Ga0209645_1119087Not Available839Open in IMG/M
3300025151|Ga0209645_1197509Not Available596Open in IMG/M
3300025151|Ga0209645_1218496Not Available551Open in IMG/M
3300027906|Ga0209404_10071569All Organisms → Viruses → Predicted Viral2001Open in IMG/M
3300029308|Ga0135226_1024975Not Available585Open in IMG/M
3300029308|Ga0135226_1039813Not Available506Open in IMG/M
3300029318|Ga0185543_1038290Not Available1058Open in IMG/M
3300029318|Ga0185543_1083026Not Available637Open in IMG/M
3300029319|Ga0183748_1005022All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium6401Open in IMG/M
3300029319|Ga0183748_1020991Not Available2315Open in IMG/M
3300029319|Ga0183748_1022374All Organisms → Viruses → Predicted Viral2206Open in IMG/M
3300029319|Ga0183748_1022793Not Available2176Open in IMG/M
3300029319|Ga0183748_1027906Not Available1872Open in IMG/M
3300029319|Ga0183748_1050418Not Available1182Open in IMG/M
3300029319|Ga0183748_1064248Not Available972Open in IMG/M
3300029319|Ga0183748_1091229Not Available722Open in IMG/M
3300029319|Ga0183748_1098331Not Available677Open in IMG/M
3300029792|Ga0183826_1028774Not Available881Open in IMG/M
3300031785|Ga0310343_10003063All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium8787Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine41.04%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine35.82%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater6.72%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater4.48%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine3.73%
Stylissa Sp. (Marine Sponge)Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Stylissa Sp. (Marine Sponge)2.24%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.49%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.49%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor1.49%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.75%
Coelocarteria Singaporensis (Marine Sponge)Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Coelocarteria Singaporensis (Marine Sponge)0.75%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001954Marine microbial communities from Colon, Panama - GS019EnvironmentalOpen in IMG/M
3300001956Marine microbial communities from Rangirora Atoll, Polynesia Archipelagos - GS051EnvironmentalOpen in IMG/M
3300001961Marine microbial communities from Dirty Rock, Cocos Island, Costa Rica - GS025EnvironmentalOpen in IMG/M
3300001969Marine microbial communities from Yucatan Channel, Mexico - GS017EnvironmentalOpen in IMG/M
3300001972Marine microbial communities from the Sargasso Sea - GS000dEnvironmentalOpen in IMG/M
3300002033Marine microbial communities from the Sargasso Sea - GS000a &bEnvironmentalOpen in IMG/M
3300002482Marine viral communities from the Pacific Ocean - ETNP_2_30EnvironmentalOpen in IMG/M
3300002483Marine viral communities from the Pacific Ocean - ETNP_6_30EnvironmentalOpen in IMG/M
3300005606Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84EnvironmentalOpen in IMG/M
3300006749Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaGEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007112Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2seep, Dobu 'control', st5dcHost-AssociatedOpen in IMG/M
3300007154Marine sponge Stylissa sp. associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - St7isHost-AssociatedOpen in IMG/M
3300007748Marine sponge C. singaporensis microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'control', co15aic 200bp-25jan2016Host-AssociatedOpen in IMG/M
3300009550Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 MetagenomeEnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300012919Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaGEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012936Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaGEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300020246Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX555934-ERR599105)EnvironmentalOpen in IMG/M
3300020265Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556012-ERR599088)EnvironmentalOpen in IMG/M
3300020269Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556080-ERR599041)EnvironmentalOpen in IMG/M
3300020281Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556022-ERR599116)EnvironmentalOpen in IMG/M
3300020297Marine microbial communities from Tara Oceans - TARA_B000000437 (ERX555970-ERR598979)EnvironmentalOpen in IMG/M
3300020299Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX555923-ERR599016)EnvironmentalOpen in IMG/M
3300020377Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)EnvironmentalOpen in IMG/M
3300020380Marine microbial communities from Tara Oceans - TARA_B000000565 (ERX555945-ERR599058)EnvironmentalOpen in IMG/M
3300020393Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556105-ERR599054)EnvironmentalOpen in IMG/M
3300020397Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075)EnvironmentalOpen in IMG/M
3300020404Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)EnvironmentalOpen in IMG/M
3300020409Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX555912-ERR599106)EnvironmentalOpen in IMG/M
3300020410Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)EnvironmentalOpen in IMG/M
3300020418Marine microbial communities from Tara Oceans - TARA_B100002051 (ERX556028-ERR599136)EnvironmentalOpen in IMG/M
3300020433Marine microbial communities from Tara Oceans - TARA_B100001989 (ERX556106-ERR599030)EnvironmentalOpen in IMG/M
3300020436Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)EnvironmentalOpen in IMG/M
3300020437Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)EnvironmentalOpen in IMG/M
3300020439Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)EnvironmentalOpen in IMG/M
3300020442Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)EnvironmentalOpen in IMG/M
3300020470Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)EnvironmentalOpen in IMG/M
3300020471Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)EnvironmentalOpen in IMG/M
3300020474Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)EnvironmentalOpen in IMG/M
3300021554Marine sponge Stylissa sp. associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - St7is 200bp no Eukaryotes lastHost-AssociatedOpen in IMG/M
3300025101Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300029308Marine harbor viral communities from the Indian Ocean - SRB2EnvironmentalOpen in IMG/M
3300029318Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289EnvironmentalOpen in IMG/M
3300029319Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516EnvironmentalOpen in IMG/M
3300029792Marine giant viral communities collected during Tara Oceans survey from station TARA_041 - TARA_Y100000052EnvironmentalOpen in IMG/M
3300031785Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MGEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GOS2235_102973123300001954MarineMKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQ*
GOS2266_105303453300001956MarineMKLTKEEARWLDNKWNDFYYYFDVETMYPKDQEIYRKIGQKLSEVKQ*
GOS2240_100109043300001961MarineMKLTKAVLNHEEARWLDDKWNDFYYYFDVESMYPK
GOS2240_102528133300001961MarineMNLNKEEAKWLDDKWNDFYYYFQVEDMFEKDQKIYQSIGKKLSEVKQ*
GOS2240_102990753300001961MarineEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQ*
GOS2233_107836943300001969MarineMNLTKEEARWLDDKWNDFYYYFQVEDMFEKDQELFQSIGKKLSEVKQ*
GOS2216_1012615523300001972MarineMKLTKDEARFLDDKWSDFFYYFQVEDMFEKDQELYRSIGRKLSEVKQ*
GOS24894_1002753543300002033MarineMKLTKDEARFLDDKWSDFFYYFQVEDMFEKDQELYRSIGRKLSEVKQ
JGI25127J35165_101888243300002482MarineMKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQELFRSIGKKLSEIK*
JGI25127J35165_102844233300002482MarineMKLTKEEARWLDDKWNDFYYYFDVESMYPKDQEIFKNIGKKLSEVKQ*
JGI25127J35165_103295633300002482MarineMKLTKEEARWLDXKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQ*
JGI25127J35165_103658743300002482MarineMKLSAEEARWLESKWSDFYYYFQVQDMFEKDQELFRSIGKKLSEVKQ*
JGI25127J35165_104953123300002482MarineMKLTKEEARWLDDKWNDFYYYFDVESMYQKDQEIFRKIGQKLSEVKQ*
JGI25127J35165_107900833300002482MarineMKLTKEEARWLDDKWNDFYYYFQVEDMYIKDQEMYKSIGQKLSEIKQ*
JGI25127J35165_108387023300002482MarineMKLTXEEARWLDNKWNDFYYYFDVESMXPKDXEIFRKIGQKLSEVKQ*
JGI25127J35165_108741313300002482MarineMKLTNEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKK
JGI25127J35165_110672733300002482MarineLKMNLTKEEARWLDDKWNDFYYYFQVEDMYEKDQEIFRNIGKKLSEVKQ*
JGI25132J35274_102406773300002483MarineKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQELFRSIGKKLSEVKQ*
JGI25132J35274_103888953300002483MarineLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFRNIGKKLSEVKQ*
JGI25132J35274_104369523300002483MarineMKLSKEQTKWLADKWADFYYYFDVESMFEKDQQIYQDIGQKLSEVKQ*
Ga0066835_1009134813300005606MarineMNLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQ*
Ga0098042_104844563300006749MarineMNLTKEEAKWLNDKWNDFYYYFRVEDMFEKDREIFRNIGKKLSEVKQ*
Ga0070750_1006355233300006916AqueousMKLTKEEARWLDDKCNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQ*
Ga0070746_1023529443300006919AqueousMISLNNEEAKWLDDKWSDFYYYFQVEDMFEKDIKIYQEIGRKLSEVKQ*
Ga0101560_110722033300007112Stylissa Sp. (Marine Sponge)MKLTKEEARWLDDKWNAFYYYFQVEDMFENDQEILKNIGKKLSEVKQ*
Ga0101548_103307513300007154Stylissa Sp. (Marine Sponge)MKLSAEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQ*
Ga0105545_101831533300007748Coelocarteria Singaporensis (Marine Sponge)MKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQELFRSIGKKLSEVKQ*
Ga0115013_10001050133300009550MarineMKMNLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFRNIGKKLSEVKQ*
Ga0115011_1007712633300009593MarineMKLTKEEAAWLDDKWNDFYYHFQVEDMFEKDQEIFKNIGKKLKEQN*
Ga0115012_1042015823300009790MarineMKLTEEEIKFLYDKWHDLYYYLEVEDMFEKDREIFKNLGDKLQKESN*
Ga0115012_1150191733300009790MarineMKLTKEEARWLDDKWNDFYYYFQVEDMFEKDIKIYQEIGRKLSEVKQ*
Ga0098043_113608533300010148MarineMKMNLTKEEAKWLNDKWNDFYYYFRVEDMFEKDREIFRNIGKKLSEVKQ*
Ga0160422_1012826043300012919SeawaterMKLTKEEAKWLDDKWNDFYYYFDVESMYPKDQEIFRKIGQKLSEVKQ*
Ga0160422_1020833553300012919SeawaterMGGLKMNLTKEEARWLDDKWNDFYYYFQVEDMFEKDQKLFQSIGKKLSEVRQ*
Ga0160422_1021035543300012919SeawaterMGGLKMNLNKEEAKWLDDKWNDFYYYFQVEDMFEKDQKIYQSIGKKLSEVKQ*
Ga0160422_1021248753300012919SeawaterMNLTKEEAKWLDDKWNDFYYYFQVEDMFEKDQKLFQSIGKKLSEVRQ*
Ga0160422_1045294343300012919SeawaterMKLTKEEARWLNDKWNDFYYYFDVESMYQRDQEIFQKIGQKLSEVKQ*
Ga0160422_1085718523300012919SeawaterMAQLTKEEAKWLDDKWNDFYYYFDVSQMYEKDQKIFQNIGKKLQEGSK*
Ga0160423_1005793983300012920Surface SeawaterMELSKEEARFLDDKWNDFYYYFQVEDMFEKDQELFRSIGKKLSE
Ga0160423_1017563113300012920Surface SeawaterTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFRNIGKKLSEVKQ*
Ga0160423_1037734553300012920Surface SeawaterKEEARFLDDKWNDFYYYFQVEDMFEKDQELFRSIGKKLSEVRQ*
Ga0160423_1080317033300012920Surface SeawaterMNLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFRNIGKKLSEVKQ*
Ga0163110_1000148383300012928Surface SeawaterMNLTKEEAKWLDDKWDDFYYYFQVRDMFEKDQKIYQSIGKKLSEVKQ*
Ga0163110_1150202323300012928Surface SeawaterMKLTKEEARWLDNKWNDFYYYFDVESMYPKDQEIFRKIGQKLSEVKQ*
Ga0163109_1017768223300012936Surface SeawaterMNLTKEEAKWLDDKWNDFYYYFQVEDMFEKDQKLFQSIGKKLSEDRQ*
Ga0163180_1000057443300012952SeawaterMKLTKEEARWLDDKWNDFYYYFQVEDMYIKDQEMYKSIGQKLSEVKQ*
Ga0163180_1135160043300012952SeawaterMKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKK
Ga0163111_1218508013300012954Surface SeawaterQKYRRMKMNLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFRNIGKKLSEVKQ*
Ga0163111_1258161133300012954Surface SeawaterMAQLTKEEAKWLDDKWNDFYYYFDVSQMYEKDQKIFQDIAKKLKEDSK*
Ga0211707_102108923300020246MarineMNLTKEEAKWLDDKWNDFYYYFQVEDMFEKDIKIYQEIGRKLSEVKQ
Ga0211533_104934533300020265MarineMNLNKEEAKWLDDKWNDFYYYFQVEDMFEKDQKIYQSIGEKLSEVKQXS
Ga0211484_101044843300020269MarineMNLNKEEAKWLDDRWIDFYYYFQVEDMFEKDQKIYQSIGEKLSEVKQ
Ga0211483_1012973933300020281MarineMKLNKEEVKFLLDKWNDFYYYFDVESMYQKDQEIFRKIGQKLSEVKQXMSKLMI
Ga0211490_100248723300020297MarineMNLNKEEAKWLDDKWNDFYYYFQVEDMFEKDQKIYQSIGEKLSEVKQ
Ga0211615_103388313300020299MarineAKWLDDKWNDFFYYFQVEDMFEKDQKIYQSIGEKLSEVRQ
Ga0211615_105457733300020299MarineMNLNKEEAKWLDDKWNDFFYYFQVEDMFEKDQKIYQSIGEKL
Ga0211647_1016241833300020377MarineMTHLTKEQAKWLDDKWNDFYYYFDVSQMYEKDQKIFQDIGKKLKEDSK
Ga0211498_1017291933300020380MarineMKLTKDEARFLDDKWNDFFYYFQVEEMYEKDQELYRSIGKKLSEVKQ
Ga0211618_1004339753300020393MarineMKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKN
Ga0211618_1007468533300020393MarineMKLTKDEARFLDDKWNDFFYYFQVEEMYEKDQELYRSIGKKLSEVKQXK
Ga0211583_1010919853300020397MarineMKLSAEEAKWLEDKWNDFYYYFQVEDMFEKDQKIYQSIGEKLSEVKQ
Ga0211659_1000522383300020404MarineMNLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFRNIGKKLSEVKQ
Ga0211472_1004378753300020409MarineMKLNKEEVKFLLDKWNDFYYYFDVESMYQKDQEIFRKIGQKLSEVKQ
Ga0211699_1025134013300020410MarineMKLNKEEVKFLLDKWNDFYYYFDVESMYQKDQEIFKKIGQKLSEVKQ
Ga0211699_1047124813300020410MarineTKLSREESRWLDDKWNDFYYYFQVEDMFDKDKDIYKSIGRKLSEVKQ
Ga0211557_1048598643300020418MarineLTKEEARWLDDKWNDFYYYFEVSDMFDKDKDIYKSIGRKLSEVKQ
Ga0211565_10000323273300020433MarineMIKFVQFSPQLRRLKMNLTKEEAKWLDDKWNDFYYYFQVEDMFEKDQKIFQNIGKKLSEVKQ
Ga0211565_1029558013300020433MarineMNLTKEEARWLNDKWNDFYYYFDVESMYQRDQEIFQKIGQKLSEVKQ
Ga0211708_1006275913300020436MarineMNLTKEEAKWLDDKWNDFYYYFQVEDMFEKDIKIYQEIGRKL
Ga0211708_1012183533300020436MarineMSLTKAVLNQEEARWLNDKWNDFYYYFDVESMYQRDQEIFQKIGQKLSEVKQ
Ga0211708_1021027013300020436MarineMKLTKDEARWLESKWSDFYYYFQVEDMFEKDIKIYQEIGRKL
Ga0211708_1027511643300020436MarineMKLNKEEVRFLLSKWNDFYYYFDVESMYPKDQEIFKNIGKKLSEVKQ
Ga0211708_1032556733300020436MarineMKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQXMFTTKS
Ga0211708_1036882043300020436MarineMKLTKEEARWLDDKWNDFYYYFDVESMYQKDQEIFRKIG
Ga0211539_1040228623300020437MarineMKLTKEEARWLDNKWNDFYYYFDVESMYPKDQEIFRKIGQKLSEVKQ
Ga0211558_1027324113300020439MarinePQLRRLKMKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQ
Ga0211559_1002847453300020442MarineMKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQELFRSIGKKLSEVKQ
Ga0211559_1009117943300020442MarineMISLNNEEAKWLDDKWSDFYYYFQVEDMFEKDIKIYQEIGRKLSEVKQ
Ga0211559_1012402743300020442MarineMKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQXMSNLMI
Ga0211543_1024934223300020470MarineMKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLKEQN
Ga0211614_1002182963300020471MarineMHLNQEEAKWLDDKWNDFFYYFQVEDMFEKDQKIYQSIGEKLSEVRQ
Ga0211614_1018666943300020471MarineMKLNKEEVRFLLNKWNDFYYYFQVEDMYEKDQEIFRN
Ga0211614_1045819423300020471MarineMKLTKEEAKWLDDKWNDFYYYFQVEDMYIKDQEMYKSIGQKLSEVKQ
Ga0211547_1011324553300020474MarineMNLTKEQARWLDDKWNDFYYYFQVEDMFEKDQEIYRSIGQKLSEVKQ
Ga0224713_119246913300021554Stylissa Sp. (Marine Sponge)MKLSAEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQ
Ga0208159_1002377103300025101MarineMNLTKEEAKWLNDKWNDFYYYFRVEDMFEKDREIFRNIGKKLSEVKQ
Ga0209348_100038443300025127MarineMKLTKEEARWLDDKWNDFYYYFDVESMYQKDQEIFRKIGQKLSEVKQ
Ga0209348_1003732173300025127MarineMKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQELFRSIGKKLSEIK
Ga0209348_100793853300025127MarineMKLTKEEARWLDDKWNDFYYYFDVESMYPKDQEIFKNIGKKLSEVKQ
Ga0209348_101108333300025127MarineMKLTNEEARWLDNKWNDFYYYFQVEDMFEKDKELFRSIGKKLSEVKQ
Ga0209348_1012837103300025127MarineMKLTKEEARWLDSKWNDFYYYFQVEDMYIKDQEIYKAIGQKLSEVKQ
Ga0209348_103388773300025127MarineMKLSKEQTKWLADKWADFYYYFDVESMFEKDQQIYQDIGQKLSEVKQ
Ga0209348_103421243300025127MarineMELNHEEAKWLESKWNDFYYYFQVEDMFEKDKKLFRSIGKKLSEVKQ
Ga0209348_103760323300025127MarineMELSKEEARWLDDKWNDFYYYFQVEDMFEKDKELFRSIGKKLSEVKQ
Ga0209348_103859463300025127MarineMISLNNEEAKWLDDKWSDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQ
Ga0209348_104278673300025127MarineMKLNKAVLNQEEARWLDDKWNDFFYYFQVEDMYEKDQELYRSIGKKLSEVKQ
Ga0209348_104393563300025127MarineMKLTKEEARWLNDKWNDFYYYFDVESMYQRDQEIFQKIGQKLSEVKQ
Ga0209348_104532783300025127MarineEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQ
Ga0209348_107132843300025127MarineMKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQXII
Ga0209348_107160853300025127MarineMELTKEEARFLDDKWNDFYYYFQVEDMFEKDQELFRSIGKKLSEVKQXNTHV
Ga0209348_107182953300025127MarineEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQXMSNLMI
Ga0209348_108733323300025127MarineMNLTKEEARWLDDKWNDFYYYFQVEDMFEKDQELFRSIGKKLSEVKQ
Ga0209348_109208533300025127MarineMKLSAEEARWLESKWSDFYYYFQVQDMFEKDQELFRSIGKKLSEVKQ
Ga0209348_109818523300025127MarineMKLTKEEARWLDDKWNDFYYYFQVEDMYIKDQEMYKSIGQKLSEIKQ
Ga0209348_110306543300025127MarineMNLTKEEARWLDDKWNDFYYYFQVEDMYEKDQEIFRNIGKKLSEVKQXRRNV
Ga0209348_111463743300025127MarineMKLTKEEARWLDDKWNDFYYYFEVSDMFDKDKDIYKSI
Ga0209348_112630423300025127MarineMKLTNEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQ
Ga0209348_113195643300025127MarineMRLSKEEARWLDSKWNDFYYYFQVEDMYIKDQEIYKAIGQKLSEVKQ
Ga0209348_114519843300025127MarineMNLTKEEARWLDDKWNDFYYYFQVEDMYEKDQEIFRNIGKKLSEVKQ
Ga0209348_115458933300025127MarineEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEQN
Ga0209348_121536413300025127MarineLTKEEARWLDDKWNDFYYYFQVEDMYEKDQEIFRNIGKKLSEVKQ
Ga0209348_121564223300025127MarineMKLTKEEARWLDDKWNDFYYYFEVSDMFDKDKDIYKSIGKKLSEVKQ
Ga0209645_100912313300025151MarineWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLKEQN
Ga0209645_102884413300025151MarineLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQ
Ga0209645_109760353300025151MarineDDKWNDFYYYFDVETMYQKDQEIFRKIGQKLSEVKQXNIHV
Ga0209645_111908733300025151MarineMKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQELFRSIGKKLSEVKQXRRNV
Ga0209645_119750913300025151MarineMKLTKEEARWLDDKWNDFYYYFEVSDMFDKDKDIYKSIGK
Ga0209645_121849623300025151MarineMKLTKEEARWLDDKWNDFYYYFDVESMYPKDQEIFKNIGKKLSEVKQXMYNLMI
Ga0209404_1007156963300027906MarineMKLTKEEAAWLDDKWNDFYYHFQVEDMFEKDQEIFKNIGKKLKEQN
Ga0135226_102497533300029308Marine HarborMISLNNEEAKWLDDKWNDFYYYFQVEDMFEKDQELYRSIGKKLSEVKQ
Ga0135226_103981333300029308Marine HarborMKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQXPNQQKKSEML
Ga0185543_103829033300029318MarineMKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQXI
Ga0185543_108302613300029318MarineKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFRNIGKKLSEVKQ
Ga0183748_1005022203300029319MarineMELSKEQAIWLADKWSDFYYYFDVESMFEKDQQIYQDIGKNLSEVKQ
Ga0183748_1020991103300029319MarineMTKLSREESRWLDDKWNDFYYYFQVEDMFDKDKDIYKSIGRKLSEVKQ
Ga0183748_102237443300029319MarineMKLNKEEVKFLLDKWNDFYYYFDVESMYQKDQEIFRKIGQKLSEVKQXN
Ga0183748_102279383300029319MarineMKLTKEEARWLDNKWNDFYYYFEVSDMFEKDKEIFKSIGRKLSEVKQ
Ga0183748_102790643300029319MarineMKLTKEEARWLDDKWNDFYYYFEVSDMFDKDKDIYKSIGRKLSEVKQ
Ga0183748_105041823300029319MarineMNLTKEEARWLDDKWNDFYYYFEVSDMFDKDKDIYKSIGKKLSEVKQ
Ga0183748_106424833300029319MarineMRLNKEEIKFLDDKWNDIYYALQVDEMFEKDQEIFKNIGKKLSEVKQ
Ga0183748_109122923300029319MarineMKLTKEEARWLDNKWNDFYYYFQVEDMFEKDIKIYQEIGRKLSEVKQ
Ga0183748_109833133300029319MarineMKLTKEEARWLDDKWNDFYYYFQVEDMFEKDQEIFKNIGKKLSEVKQXLNTK
Ga0183826_102877413300029792MarineMKLTKDEARFLDDKWNDFFYYFQVEDMYEKDQELFRSIGKKLSEVKQXK
Ga0310343_10003063103300031785SeawaterMISLNNEEAKWLDDKWNDFYYYFQVEDMFEKDQELFQSIGKKLSEVKQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.