Metagenome / Metatranscriptome Family F058968

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058968
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	97 residues
Representative Sequence	MADGRVRGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRAVADWYRQQADRLQGELAEAGA
Number of Associated Samples	107
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.93 %
% of genes near scaffold ends (potentially truncated)	41.04 %
% of genes from short scaffolds (< 2000 bps)	86.57 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.015 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (13.433 % of family members)
Environment Ontology (ENVO)	Unclassified (26.119 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.015 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.98% β-sheet: 19.38% Coil/Unstructured: 42.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF00171	Aldedh	41.79
PF01717	Meth_synt_2	23.88
PF01464	SLT	2.24
PF00892	EamA	2.24
PF07995	GSDH	1.49
PF08267	Meth_synt_1	1.49
PF13439	Glyco_transf_4	1.49
PF01619	Pro_dh	1.49
PF03853	YjeF_N	0.75
PF00682	HMGL-like	0.75
PF12680	SnoaL_2	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	41.79
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	41.79
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	41.79
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	25.37
COG0506	Proline dehydrogenase	Amino acid transport and metabolism [E]	1.49
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	1.49
COG0062	NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domain	Nucleotide transport and metabolism [F]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.01 %
Unclassified	root	N/A	2.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.01 %
Unclassified	root	N/A	2.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.01 %
Unclassified	root	N/A	2.99 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.60 %
Unclassified	root	N/A	2.99 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	80.60 %
Unclassified	root	N/A	2.99 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	64.93 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3.73 %
Unclassified	root	N/A	2.99 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	64.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.73 %
Unclassified	root	N/A	2.99 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	64.93 %
Unclassified	root	N/A	2.99 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	64.93 %
Unclassified	root	N/A	2.99 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_2_1_1_newblercontig141175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300000956\|JGI10216J12902_102763330	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300001686\|C688J18823_10044318	All Organisms → cellular organisms → Bacteria	3071	Open in IMG/M
3300001991\|JGI24743J22301_10157830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300002568\|C688J35102_117874297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300003990\|Ga0055455_10141305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300004006\|Ga0055453_10241936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300004114\|Ga0062593_101006086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	855	Open in IMG/M
3300004156\|Ga0062589_102359315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300004156\|Ga0062589_102817498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300004157\|Ga0062590_100002121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6459	Open in IMG/M
3300004463\|Ga0063356_106496733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300004480\|Ga0062592_100622942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	922	Open in IMG/M
3300004480\|Ga0062592_101708907	Not Available	612	Open in IMG/M
3300004643\|Ga0062591_100650540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	943	Open in IMG/M
3300005093\|Ga0062594_100798141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	872	Open in IMG/M
3300005093\|Ga0062594_103414506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300005172\|Ga0066683_10617175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300005175\|Ga0066673_10522761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300005330\|Ga0070690_100686337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300005337\|Ga0070682_100835708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300005337\|Ga0070682_101599705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300005347\|Ga0070668_100460267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1095	Open in IMG/M
3300005354\|Ga0070675_100674948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	940	Open in IMG/M
3300005355\|Ga0070671_100743460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	852	Open in IMG/M
3300005365\|Ga0070688_101603610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300005406\|Ga0070703_10024731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1777	Open in IMG/M
3300005437\|Ga0070710_10569046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300005440\|Ga0070705_100363734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1059	Open in IMG/M
3300005451\|Ga0066681_10518101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	736	Open in IMG/M
3300005456\|Ga0070678_102091919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300005459\|Ga0068867_102306889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300005543\|Ga0070672_100958209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300005614\|Ga0068856_101474525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300005616\|Ga0068852_101872554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300005617\|Ga0068859_102175845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	612	Open in IMG/M
3300005718\|Ga0068866_10357205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	930	Open in IMG/M
3300005884\|Ga0075291_1008826	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300005887\|Ga0075292_1031730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	727	Open in IMG/M
3300006031\|Ga0066651_10067402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1722	Open in IMG/M
3300006038\|Ga0075365_10020479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4101	Open in IMG/M
3300006038\|Ga0075365_10046483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2851	Open in IMG/M
3300006038\|Ga0075365_10074755	All Organisms → cellular organisms → Bacteria	2286	Open in IMG/M
3300006038\|Ga0075365_10484514	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300006038\|Ga0075365_10863714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300006046\|Ga0066652_100022420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4370	Open in IMG/M
3300006046\|Ga0066652_101414171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300006604\|Ga0074060_11484526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300006605\|Ga0074057_12008355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300006755\|Ga0079222_10510980	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300006845\|Ga0075421_102498996	Not Available	538	Open in IMG/M
3300006846\|Ga0075430_101526353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300006847\|Ga0075431_101281158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300006852\|Ga0075433_10125705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2277	Open in IMG/M
3300006852\|Ga0075433_11613371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300006854\|Ga0075425_100949340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	982	Open in IMG/M
3300006871\|Ga0075434_100765544	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300006903\|Ga0075426_11188664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300007076\|Ga0075435_100221693	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300009012\|Ga0066710_100759158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1484	Open in IMG/M
3300009012\|Ga0066710_101699638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	960	Open in IMG/M
3300009094\|Ga0111539_10553191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1340	Open in IMG/M
3300009098\|Ga0105245_11087687	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300009137\|Ga0066709_100225595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2485	Open in IMG/M
3300009156\|Ga0111538_12116132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300009553\|Ga0105249_11644780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300009789\|Ga0126307_10000841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	20227	Open in IMG/M
3300009840\|Ga0126313_10007452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6697	Open in IMG/M
3300009840\|Ga0126313_10062935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2650	Open in IMG/M
3300009840\|Ga0126313_10206435	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300009840\|Ga0126313_10262031	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300009840\|Ga0126313_10349378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1165	Open in IMG/M
3300009840\|Ga0126313_10697214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	822	Open in IMG/M
3300010038\|Ga0126315_10018031	All Organisms → cellular organisms → Bacteria	3490	Open in IMG/M
3300010038\|Ga0126315_10302953	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300010038\|Ga0126315_10528215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300010040\|Ga0126308_10007844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5207	Open in IMG/M
3300010040\|Ga0126308_10291876	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300010041\|Ga0126312_10014728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5229	Open in IMG/M
3300010041\|Ga0126312_10158411	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300010044\|Ga0126310_10099321	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
3300010044\|Ga0126310_11351281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300010044\|Ga0126310_11758317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300010166\|Ga0126306_10225510	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300010301\|Ga0134070_10455875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300010375\|Ga0105239_11055383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	935	Open in IMG/M
3300010400\|Ga0134122_10000053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	54943	Open in IMG/M
3300010400\|Ga0134122_11172165	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300012204\|Ga0137374_10002598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	21154	Open in IMG/M
3300012204\|Ga0137374_11272150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300012350\|Ga0137372_10417314	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300012358\|Ga0137368_10308273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1067	Open in IMG/M
3300012358\|Ga0137368_10793270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300012360\|Ga0137375_10318167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1398	Open in IMG/M
3300012373\|Ga0134042_1234424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300012960\|Ga0164301_10480503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300012984\|Ga0164309_10758492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	777	Open in IMG/M
3300013297\|Ga0157378_10159851	All Organisms → cellular organisms → Bacteria	2106	Open in IMG/M
3300013308\|Ga0157375_11776211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300014157\|Ga0134078_10049774	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300017654\|Ga0134069_1197853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300018466\|Ga0190268_10773953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300018469\|Ga0190270_10694641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1008	Open in IMG/M
3300018482\|Ga0066669_10491885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1060	Open in IMG/M
3300018482\|Ga0066669_10765362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	853	Open in IMG/M
3300025885\|Ga0207653_10196222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300025903\|Ga0207680_10634739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300025915\|Ga0207693_11067923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300025917\|Ga0207660_10706270	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300025928\|Ga0207700_11265297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300025934\|Ga0207686_11814727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300025935\|Ga0207709_11067866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300025960\|Ga0207651_11202419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300025961\|Ga0207712_11559957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300025981\|Ga0207640_11416744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300026075\|Ga0207708_10214320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1540	Open in IMG/M
3300026075\|Ga0207708_11907407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300026089\|Ga0207648_12002384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300026306\|Ga0209468_1174634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300027866\|Ga0209813_10307181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300027909\|Ga0209382_11765558	Not Available	604	Open in IMG/M
3300028592\|Ga0247822_10469903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	991	Open in IMG/M
3300028596\|Ga0247821_10417859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	840	Open in IMG/M
3300028722\|Ga0307319_10257431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300028754\|Ga0307297_10206481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300030336\|Ga0247826_10610215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
3300031091\|Ga0308201_10395849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300031231\|Ga0170824_102383933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300031469\|Ga0170819_13135829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300031562\|Ga0310886_10566806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300031716\|Ga0310813_11113627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300031720\|Ga0307469_11131176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300032013\|Ga0310906_11420793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.66%
Host-Associated	Host-Associated	31.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.42%
Plants	Host-Associated → Plants	31.34%
Aquatic	Environmental → Aquatic	1.49%
Unclassified	Environmental → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.46%
Roots	Host-Associated → Plants → Roots	4.48%
Marine	Environmental → Aquatic → Marine	1.49%
Unclassified	Environmental → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.93%
Loam	Environmental → Terrestrial → Soil → Loam	11.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.72%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	4.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.48%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.49%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.49%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.72%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	4.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.48%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.24%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.24%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.49%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.49%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	13.43%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.48%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	4.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.24%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.24%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.49%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.49%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.49%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_02540890	2124908016		MADGRVKGLTLRGDEPKRLELSDGSRLALDATCDRDRSEWRRLGRRRSRLSVADAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGA
JGI10216J12902_1027633302	3300000956	Soil	MSERTITGRSLLGEAPMRLELSDGTRLMLDAAVDSEHVEWRRLGRRRTTISVSEATRLAGDDFADYVAVRTRAEAAWLRAVSDWYREEADRLQRELAETAA*
C688J18823_100443182	3300001686	Soil	MEEQVRGTTLRGDEPKRLELSDGSRLMLDAASDEERKVWRRLGRGHTSVSVSEAAELAGGEFGDYVEVRTRSEVEWLRAVADWYRERADHLEDQLGDLATAR*
JGI24743J22301_101578301	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	PKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV*
C688J35102_1178742972	3300002568	Soil	ASVESSDLNATRLLRRAERGREMAEQGVRGTTLHGDEPKRLELSDGSRLMLDAASDEDRKVWRRLGRGHTSVSVSEASALAGAEFGDYVEVRTRAEVEWLRAVADWYRQRAYQLEEQLGDLATAS*
Ga0055455_101413052	3300003990	Natural And Restored Wetlands	MADGRVRGLTLRGDEPKRLELSDGSRLALDATSDRDRSEWRRLGRRRSSMSVPDAIALAGDEYAGYVTVRTRAEVEWLRAVADWYRLQADRLQGELAAAGA*
Ga0055453_102419362	3300004006	Natural And Restored Wetlands	GDDAMEEQVRGRTLRGDEPQRLELSDGSRLMLDSEPDGDEKKAWRRLGRGHTNVSVAEARDLAGEGFAGYVNVRTRAEVEWLRAVADWYRQRADRLQSQLADGRA*
Ga0062593_1010060862	3300004114	Soil	MRLELSDGTRLMLDATVDSGHVEWRRLGRRRTAVSVSEATRLAGDEFADYVAVRTRAEAEWLRAVSDWYREEADRLQGELADT
Ga0062589_1023593152	3300004156	Soil	MRLELSDGTRLMLDATVDSEHVEWRRLGRRRTAVSVSEATRLAGDEFADYVAVRTRAEAEWLRAVSDWYREEADRLQGELADTRA*
Ga0062589_1028174981	3300004156	Soil	MSENRIRGRTLCEDAPSRLELSDGTRLMLDASAEQPTIHWRRLGRRRSNVSVSEATSLAGDEFAHYVEVRTRAEAEWLRAVSDWYREQADRLQSELAAATA*
Ga0062590_1000021213	3300004157	Soil	MSENRIRGRTLSEDAPSRLELSDGTRLMLDGAAEQPTIQWRRLGRRRSNVSVSEAASLAGEEFAQYVEVRTRAEAEWLRAVSDWYREQADGLQRELAAAKA*
Ga0063356_1064967331	3300004463	Arabidopsis Thaliana Rhizosphere	MADERVRGASLLGDEPKRLELSDGSRLILDGSAEADRIEWRRLGRGWTNVSVSEAVHLAGDEFADYVAVRTRAEAEWLRTLSDWYRHQAERLEDQ
Ga0062592_1006229422	3300004480	Soil	MADGRVKGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIVLAGDEYAGYVTVRTRAEVEWLRAVADWYRQQADRLQGELAEAGA*
Ga0062592_1017089071	3300004480	Soil	MTNSTICGRSLRGEAPMRLELNDGTRLMLDATADQEHVEWRRLGRRRTAISVSEATRLAGDDFADYVAVRTRAEAEWLRAVSD
Ga0062591_1006505401	3300004643	Soil	MADGRVKGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRAVADWYRQQADRLQGELAEAGA*
Ga0062594_1007981412	3300005093	Soil	MADERVRGASLLGDEPKRLELSDGSRLILDGSAEADRIEWRRLGRGWTNVSVSEAVHLAGDEFADYVAVRTRAEAEWLRTLSDWYRHQAERL
Ga0062594_1034145062	3300005093	Soil	MTNGTICGRSLRGEAPMRLELNDGTRLMLDATADQEHVEWRRLGRRRTAISVSEATRLAGDDFADYVAVRTRAEAEWLRAVSDWYR
Ga0066683_106171751	3300005172	Soil	MSENRIRGAGLRGDAPSRLEPSDGSRLMLDGTADQDRIAWRRRGRRRSSVSVSEAARLAGDEFADYVAVRTRAEAEWLRAVSDWYREQADRLQSELASSTA*
Ga0066673_105227612	3300005175	Soil	ACCGGREGDADMEERVCGTTLRGDEPKRLELSDGSRLMLDAESNGERKVWRRLGHGHTSVSVAEARDLAGDEFSGYVETRTRSEVEWLRAVADWYRERADHLQSQLGARG*
Ga0070690_1006863371	3300005330	Switchgrass Rhizosphere	AGGRGREMADGRVRGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV*
Ga0070682_1008357082	3300005337	Corn Rhizosphere	MRLELSDGTRLMLDATVDSEHVEWRRLGRRRTAVSVSEATRLAGDEFADYVAVRTRAEAEWLRAVSDWYREEADRLQGEL
Ga0070682_1015997051	3300005337	Corn Rhizosphere	LSDGSRLALDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV*
Ga0070668_1004602672	3300005347	Switchgrass Rhizosphere	MADERVRGASLLGDEPKRLELSDGSRLILDGSAEADRIEWRRLGRGWTNVSVSEAVHLAGDEFADYVAVRTRAEAEWLRTLSDWYRHQAERLEDQLSEAR*
Ga0070675_1006749481	3300005354	Miscanthus Rhizosphere	MADGRVRGLTLRGDEPKRLELSDGSRLALDATCDRDRSEWRRLGRRRSRLSVADAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV*
Ga0070671_1007434601	3300005355	Switchgrass Rhizosphere	LTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV*
Ga0070688_1016036101	3300005365	Switchgrass Rhizosphere	MADGRVRGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVAVRTRAEVEWLRTVADWYRQQADRLQGELAEAGV
Ga0070703_100247312	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	LRGDEPKRLELSDGSRLALDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRAVADWYRQQADRLQGELAEAGVV*
Ga0070710_105690462	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LWRVEGEREMADGRVRGLTLRGDEPKRLELSDGSRLALDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV*
Ga0070705_1003637342	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTNGTICGRSLRGEAPMRLELNDGTRLMLDATADQEHVEWRRLGRRRTAISVSEATRLAGDDFADYVAVRTRAEAEWLRAVSDWYREEADRLQRELADSRA*
Ga0066681_105181012	3300005451	Soil	MEERVCGTTLRGDEPKRLELSDGSRLMLDAESNGERKVWRRLGHGHTSVSVAEARDLAGDEFSGYVETRTRSEVEWLRAV
Ga0070678_1020919192	3300005456	Miscanthus Rhizosphere	PMRLELNDGTRLMLDATVDSDHVEWRRLGRRRTAISVSEATRLAGDEFADYVAIRTRAEAEWLRAVSDWYRDEADRLQRELADSRA*
Ga0068867_1023068892	3300005459	Miscanthus Rhizosphere	GREPMNKGTIRGRSLRGEAPMRLELSDGTRLMLDATVDSEHVEWRRLGRRRTAVSVSEATRLAGDEFADYVAVRTRAEAEWLRAVSDWYREEADRLQGELADTRA*
Ga0070672_1009582092	3300005543	Miscanthus Rhizosphere	MADGRVRGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV*
Ga0068856_1014745251	3300005614	Corn Rhizosphere	MADGRVRGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRAVADWYRQQADRLQGELAEAGA*
Ga0068852_1018725542	3300005616	Corn Rhizosphere	MADVRVRGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV*
Ga0068859_1021758451	3300005617	Switchgrass Rhizosphere	SDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV*
Ga0068866_103572052	3300005718	Miscanthus Rhizosphere	RVRGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV*
Ga0075291_10088262	3300005884	Rice Paddy Soil	MYESTICGRSLKGDSPMRLELNDGTRLMLDATVDSEHVEWRRLGRRRTAISVSEATRLAGDEFADYVAIRTRAEAEWLRAVSDWYRDEADRLQRELASAEA*
Ga0075292_10317301	3300005887	Rice Paddy Soil	GTICGRSLKGDSPMRLELNDGTRLMLDATVDSEHVEWRRLGRRRTAISVSEATRLADDEFADYVAIRTRAEAEWLRAVSDWYRDEADRLQRELASAEA*
Ga0066651_100674021	3300006031	Soil	MEERVCGTTLRGDEPKRLELSDGSRLMLDAESNGERKVWRRLGHGHTSVSVAEARDLAGDEFSGYVETRTRSEVEWLRAVADWYRERADHLQSQLGARG*
Ga0075365_100204792	3300006038	Populus Endosphere	MTDQRVTGSTLRGDEPKRLELSDGSRLTLDATSDRDRSGWRRLGRQRSNLSVSDAIDLAGDEYAPYVAVRTRAEVEWLRAVADWYRHQADRLQDQLADARA*
Ga0075365_100464832	3300006038	Populus Endosphere	MADQRVRGRSLLGEEPKRLELSDGSRLMLDATSEKDRTQWRRLGGRHSDLSVSEAVDLAGADYAAYVEVRTRSEVEWLRAVADWYRQQADRLQGELAESRA*
Ga0075365_100747552	3300006038	Populus Endosphere	MEKRVRGTTLRGDEPQRLELSDGSRLMLDSEAGEDRKVWRRLGRGHTSVSVAEARDLAGDEFADYVEVRTRAEVEWLRAVADWYRQQAERLQGQLADTRA*
Ga0075365_104845142	3300006038	Populus Endosphere	MADQRVRGFALRGDEPQRLELSDGSRLMLDGESGEDRTEWRHIGRRHSNLSVSEAADLAGDEYTEYVEVRTRAEVEWLRAVADWYRERADGLQRQLADARA*
Ga0075365_108637142	3300006038	Populus Endosphere	MEERVRGTTLHGDEPKRLELSDGSRLMLDAETEDRKVWRRLGRGHTSVSVAEARDLAGDEFSGYVETRTRSEVEWLRAVADWYRQRADHLQGQLADTRA*
Ga0066652_1000224204	3300006046	Soil	MAEDRIRGREPPGGDPRHIRGTELLGGDPQRLELSDGSRLMLDGSSDHDRVRWRRLGRRRSSVSVAEAVDLAGAEFGDYVAIRTRAEAAWLRAVADWYREQADRLQRELAEAGAGA*
Ga0066652_1014141712	3300006046	Soil	MAERVRGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSSLSVSDAIDIAGDEYAGYVAVRTRAEVEWLRAVADWYRQQADRLQGQLAEARA*
Ga0074060_114845261	3300006604	Soil	DGRVRGLTLRGDEPKRLELSDGSRLALDATSDRDRSQWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGG*
Ga0074057_120083552	3300006605	Soil	MRLELSDGTRLMLDATVDSDHVEWRRLGRRRTAVSVSEATRLAGDEFADYVAVRTRAEAEWLRAVSDWYREEADRLQGE
Ga0079222_105109802	3300006755	Agricultural Soil	MTNGTICGRSLRGEAPMRLELNDGTRLMLDATADQEHVEWRRLGRRRTAISVSEATRLAGDDFADYVAVRTRAEAEWLRAVSDWYREEADRLQRELASAEA*
Ga0075421_1024989961	3300006845	Populus Rhizosphere	ELSDGSRLILDGSAEADRIEWRRLGRGWTNVSVSEAVHLAGDEFADYVAVRTRAEAEWLRTLSDWYRHQAERLEDQLSEAR*
Ga0075430_1015263532	3300006846	Populus Rhizosphere	SLLGDEPKRLELSDGSRLILDGSAERDRIEWRRLGRGWTNVSVSEAMSLAGDEFADYVTVRTRAEAEWLRTLSDWYRHEAERLEDELSEAR*
Ga0075431_1012811582	3300006847	Populus Rhizosphere	MTNGTICGRSLRGEGPMRLELNDGTRLMLDATADQEHVEWRRLGRRRTAISVSEATRLAGDDFADYVAVRTRAEAEWLRAVSDWYREEADRL
Ga0075433_101257051	3300006852	Populus Rhizosphere	AMTNGTICGRSLRGEAPMRLELNDGTRLMLDATADQEHVEWRRLGRRRTAISVSEATRLAGDDFADYVAVRTRAEAEWLRAVSDWYREEADRLQRELADSRA*
Ga0075433_116133712	3300006852	Populus Rhizosphere	EGAYEMNEGRIRGTGLRGDAPRRLELSDGTRLMLDATVDQEHVEWRRLGRRRTGVSVSEAARLAGDEFADYVAVRTRAEAGWLRAVSDWYREQADRLERELAETS*
Ga0075425_1009493402	3300006854	Populus Rhizosphere	ELSDGTRLMLDATVDQEHVEWRRLGRRRTGVSVSEAARLAGDEFADYVAVRTRAEAGWLRAVSDWYREQADRLERELAETS*
Ga0075434_1007655442	3300006871	Populus Rhizosphere	MNEGRIRGTGLRGDAPRRLELSDGTRLMLDATVDQEHVEWRRLGRRRTGVSVSEAARLAGDEFADYVAVRTRAEAGWLRAVSDWYREQADRLERELAEKS*
Ga0075426_111886641	3300006903	Populus Rhizosphere	LELNDGTRLMLDATADQEHVEWRRLGRRRTAISVSEATRLAGDDFADYVAVRTRAEAEWLRAVSDWYREEADRLQRELADSRA*
Ga0075435_1002216932	3300007076	Populus Rhizosphere	MNEGRIRGTGLRGDAPRRLELSDGTRLMLDATVDQEHVEWRRLGRRRTGVSVSEAARLAGDEFADYVAVRTRAEAGWLRAVSDWYREQADRLERELAETS*
Ga0066710_1007591582	3300009012	Grasslands Soil	MSENRIRGAGLRGDAPSRLELSDGSRLMLDGTADQDRIAWRRLGRRRSSVSVSEAARLAGDEFADYVAVRTRAEAEWLRAVSDWYREQADRLQSELASSTA
Ga0066710_1016996383	3300009012	Grasslands Soil	MADGRVKGLTLRGDEPKRLELSDGSRLALDGTSDRDRSEWRRLGRRRSRLSVADAIALAGAEYAGYVTVRTRAEVEWLRAVADWYRQQADRLQGELAEAGVV
Ga0111539_105531912	3300009094	Populus Rhizosphere	MADERVHGASLLGEEPKRLELSDGSRLILDGSADADQIEWRRLGRGWTNVSVSEAVNLAGDEFADYVTVRTRAEAEWLRTLSDWYRDQADRLENELSEAR*
Ga0105245_110876872	3300009098	Miscanthus Rhizosphere	MTNSTISGRSLRGEAPMRLELNDGTRLMLDATADQEHVEWRRLGRRRTAISVSEATRLAGDDFADYVAVRTRAEAEWLRAVSDWYREEADRLQRELADTKA*
Ga0066709_1002255952	3300009137	Grasslands Soil	MSENRIRGAGLRGDAPSRLELSDGSRLMLDGTADQDRIAWRRLGRRRSSVSVSEAARLAGDEFADYVAVRTRAEAEWLRAVSDWYREQADRLQSELASSTA*
Ga0111538_121161321	3300009156	Populus Rhizosphere	RYAMTNGTICGRSLRGEAPMRLELNDGTRLMLDATADQEHVEWRRLGRRRTAISVSEATRLAGDDFADYVAVRTRAEAEWLRAVSDWYREEADRLQRELADSRA*
Ga0105249_116447802	3300009553	Switchgrass Rhizosphere	MTNSTISGRSLRGEAPMRLELNDGTRLMLDATADQEHVEWRRLGRRRTAISVSEATRLAGDDFADYVAVRTRAEAEWLRAVSDWYRDEADRLQRELA
Ga0126307_1000084110	3300009789	Serpentine Soil	MADQQVRGFALRGDEPQRLELSDGSRLMLDGESGADRTEWRRLGRRHSNLSVSEAVDLAGREYAEYVTVRTRAEVEWLRAVADWYRAQADRLQLQLADGAA*
Ga0126313_100074521	3300009840	Serpentine Soil	EMADQQVRGFALRGDEPQRLELSDGSRLMLDGESGEDRTEWRRLGRRHSNLSVSEAVDLAGREYAEYVEVRTRAEVEWLRAVADWYRQRADGLQGQLADAEG*
Ga0126313_100629351	3300009840	Serpentine Soil	MADQGVRGTTLRGDEPKRLELSDGSRLMLDAASDDDRKVWRRLGRGHTSVSVSEAAELAGGEFGEYVEVRTRAEVEWLRAVADWYRQRADGLEDQLGDLAPVS*
Ga0126313_102064352	3300009840	Serpentine Soil	MAGNGIRGRSLRGDDPQRLELNDGSRLMLDGAADQERVQWRRIGRRRSNVTVSEAVDLAGNEFGDYVAIRTRAEAAWLRAVSDWYREQADRLQRELAETRA*
Ga0126313_102620312	3300009840	Serpentine Soil	MADQQVRGFALRGDEPQRLELSDGSRLMLDGESGADRTEWRRLGRRHSNLSVSEAVDLAGREYAEYVEVRTRAEVEWLRAVSDWYRQRADGLQGQLADVNA*
Ga0126313_103493782	3300009840	Serpentine Soil	MADEQVRGTTLRGDEPKRLELSDGSRLLLDGSADQDRVEWKRLGRRRSRLSVAEARRLAGEEYAGYVATRTRAEAEWLRSVADWYREQADRLQRELADTPA*
Ga0126313_106972142	3300009840	Serpentine Soil	MDEQRVRGLTLRGDEPKRLELSDGSRLALDATSDRDRSEWRRLGRRRSNLTVSAAIDLAGEEYAGYVAVRTRAEVEWLRAVADWYRQQADRLQGQLADASA*
Ga0126315_100180313	3300010038	Serpentine Soil	MADQGVRGTTLRGDEPKRLELSDGSRLMLDAASDDDRKVWRRLGRGHTSVSVSEAAELAGGEFGEYVEVRTRAEVEWLRAVADWYRQRADGLEDQLGDLAPIS*
Ga0126315_103029532	3300010038	Serpentine Soil	MADQRVRGLCLQGDEPQRLELSDGSRLMLDGASGDDRTEWRRLGRRHSNLSVSEAADLAGDEYSDYVAVRTRAEVEWLHAVADWYRQQGDRLQSQLADART*
Ga0126315_105282151	3300010038	Serpentine Soil	MADQQVRGFALRGDEPQRLELSDGSRLMLDGESGEARTEWRRLGRRHSNLSVSEAVDLAGREYAEYVEVRTRAEVEWLRAVADWYRQRADGLQGQLADAEA*
Ga0126308_100078441	3300010040	Serpentine Soil	MADQGVRGTTLRGDEPKRLELSDGSRLMLDAASDDDRKVWRRLGRGHTSVSVSEAAELAGGEFGEYVEVRTRAEVEWLRAVADWYRQRADGLEDQLG
Ga0126308_102918762	3300010040	Serpentine Soil	MADQQVRGFALRGDEPQRLELSDGSRLMLDGESGADRTEWRRLGRRHSNLSVSEAVDLAGREYAEYVTVRTRAEVEWLRAVADWYRAQADRLQLQLADGTA*
Ga0126312_100147283	3300010041	Serpentine Soil	MDEQRVRGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSNLTVSAAIDLAGEEYAGYVAVRTRAEVEWLRAVADWYRQQADRLQGQLADASA*
Ga0126312_101584112	3300010041	Serpentine Soil	MADQQVRGFALRGDEPQRLELSDGSRLMLDGESGEDRTEWRRLGRRHSNLSVSEAVDLAGREYAEYVEVRTRAEVEWLRAVADWYRQRADGLQGQLADAEA*
Ga0126310_100993212	3300010044	Serpentine Soil	LTLRGDEPRRLELSDGSRLMLDATSEENRSEWRRLGRRHSNLSVSDAVELAGDEYAGYVATRTRAEVEWLRAVADWYREQADRLQGQLADVSA*
Ga0126310_113512811	3300010044	Serpentine Soil	MAENRLRGRKLRGEDPQRLELSDGSRLMLDGRADQARIQWRRLGRRRSNVTVGEALDLAGSEFGDYVAIRTRAEAAWLRAMADWYRDQAERLQRELADSGARA*
Ga0126310_117583171	3300010044	Serpentine Soil	MEEQVRGTTLRGDEPKRLELSDGSRLMLDAASDEERKVWRRLGRGHTSVSVSEAVELAGGEFGDYVEVRTRSEVEWLRAVADWYRERADHLEDQLGDLATAR*
Ga0126306_102255102	3300010166	Serpentine Soil	MADQRVRGVFLRGDEPKRLELSDGSRLMLDGAGTARTEWRRLGRQHTNVSVAEASELAGEEYADYVEIRTRAEVEWLRAVADWYRQQADRLHRQLADCSA*
Ga0134070_104558752	3300010301	Grasslands Soil	MSENRIRGAGLRGDAPSRLELSDGSRLMLDGTADQDRIAWRRLGRRRSSVSVSEAARLAGDEFADYVAVRTRAQAEWLRAVSDWYREQRQAQATADAAALAG
Ga0105239_110553831	3300010375	Corn Rhizosphere	KRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV*
Ga0134122_1000005346	3300010400	Terrestrial Soil	MADERVHGASLLGEEPKRLELSDGSRLILDGSADADQIEWRRLGRGWTNVSVSEAVNLAGDEFADYVTVRTRAEAEWLRTLSDWYRHQADRLENELSEAR*
Ga0134122_111721651	3300010400	Terrestrial Soil	GSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV*
Ga0137374_1000259811	3300012204	Vadose Zone Soil	MADDQVRGTTLRGDEPKRLELSDGSRLLLDGSASQDPIEWRRLGGRHENISHESISVAEASRLAGDDYSGYVATRTRAEAEWLRTVADWYRDQADRLQGELADPPE*
Ga0137374_112721502	3300012204	Vadose Zone Soil	LELSDGTRLMLDGEAEQDRILWRRLGRRRSNVSVSEAVDLAGDEFSEYIEVRTRAEVEWLRAVSDWYCQQAERLQGQLVDAARA*
Ga0137372_104173142	3300012350	Vadose Zone Soil	MTDGDVRGTTLRGDEPKRLELSDGSRLLLDGEAPDGRPVAWRRVGRHRGVVTVPEAERLAGPKFSHFVEVRTRSEVEWLRAMADWYREQAARLQSQLADARS*
Ga0137368_103082731	3300012358	Vadose Zone Soil	MADQQVRGAVLRGDEPQRLELSDGSRLMLDGESGEDRTEWRRLGRRHSNLSVSEAVDLAGGEYADYVEVRTRAEVEWLRAVSDWYRDQADRLQGQLADANA*
Ga0137368_107932701	3300012358	Vadose Zone Soil	LELSDGTRLMLDGEAEQDRILWRRLGRRRSNVSVSEAVDLAGDEFAEYVAIRTRAEVEWLRAVSDWYCQQAERLQRQLVDARA*
Ga0137375_103181673	3300012360	Vadose Zone Soil	LELSDGTRLMLDGEAEQDRILWRRLGRRRSNVSVSEAVDLAGAEFAEYVAIRTRAEVEWLRAVSDWYCQQAERLQRQLADAARA*
Ga0134042_12344242	3300012373	Grasslands Soil	MADGRVKGLTLRGDEPKRLELSDGSRLALDGTSDRDRSEWRRLGRRRSRLSVADAIALAGAEYAGYVTVRTRAEVEWLRAVADWYRQQADRLQGELAEAGVV*
Ga0164298_113201382	3300012955	Soil	MLDATVDSEHVEWRRLGRRRTAVSVSEATRLAGDEFADYVAVRTRAEAEWLRAVGAWYRGERDRLRGELADTRA*
Ga0164301_104805031	3300012960	Soil	MNEVIIRGTGLRGDAPRRLELSDGTRLMLDATVDQEQVEWRRLGRRRTGVSVSEAARLAGDEFADYVAVRTRAEAGWLRAVSDWYREQADRLERELAETS*
Ga0164309_107584921	3300012984	Soil	MNKGTIRGRSLRGEAPMRLELSDGTRLMLDATVDSEHVEWRRLGRRRTAVSVSEATRLAGDEFADYVAVRTRAEAEWLRAVSDWYREEADRLQGELADTRA*
Ga0157378_101598512	3300013297	Miscanthus Rhizosphere	MADGRVRGLSLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV*
Ga0157375_117762111	3300013308	Miscanthus Rhizosphere	MTNGTICGRSLRGEAPMRLELNDGTRLMLDATADQEHVEWRRLGRRRTAISVSEATRLAGDDFADYVAVRTRAEAEWLRAVSDWYREEADRLQRELADTKA*
Ga0134078_100497742	3300014157	Grasslands Soil	MEERVCGTTLRGDEPKRLELSDGSRLMLDAASNGERKVWRRLGHGHTSVSVAEARDLAGDEFSGYVETRTRSEVEWLRAVADWYRERADHLQSQLGARG*
Ga0134069_11978531	3300017654	Grasslands Soil	MEERVCGTTLRGDEPKRLELSDGSRLMLDAASNGERKVWRRLGHGHTSVSVAEARDLAGDEFSGYVETRTRSEVEWLRAVADWYRERADHLQSQLGARG
Ga0190268_107739531	3300018466	Soil	MADERVRGASLLGDEPKRLELSDGSRLILDGSAERDRIEWRRLGRGWTNVSVSEAVSLAGDEFADYVTVRTRAEAEWLRTLSDWYRHEAERLESQLSETR
Ga0190270_106946412	3300018469	Soil	MADERVRGNTLLGDEPKRLELSDGSRLVLDGSAERDRIEWRGLGRGWTNVSVSEAVSLAGDEFADYVTVRTRAEAEWLRTLSDWYRHEAERLEDELSE
Ga0066669_104918852	3300018482	Grasslands Soil	MRMSDGRIRGTSLRGDAPSRLELSDGSRLMLDGTVDQNEVEWRRLGRQRTAVSVSEAEELAGEEFGDYVAVRTRAEAESLRAVYDWYRDHTELLQHQPADACA
Ga0066669_107653622	3300018482	Grasslands Soil	MEERVCGTTLRGDEPKRLELSDGSRLMLDAESNGERKVWRRLGHGHTSVSVAEARDLAGDEFSGYVETRTRSEVEWLRAVADWYRERADHLQSQLGARG
Ga0207653_101962221	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	EMADGRVRGLTLRGDEPKRLELSDGSRLALDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRAVADWYRQQADRLQGELAEAGVV
Ga0207680_106347391	3300025903	Switchgrass Rhizosphere	ADGRVRGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV
Ga0207693_110679232	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MADGRVRGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADW
Ga0207660_107062702	3300025917	Corn Rhizosphere	MADGRVRGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGV
Ga0207700_112652972	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MADGRVRGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV
Ga0207686_118147272	3300025934	Miscanthus Rhizosphere	MRLELSDGTRLMLDATVDSEHVEWRRLGRRRTAVSVSEATRLAGDEFADYVAVRTRAEAEWLRAVSDWYREEADRLQGELADTRA
Ga0207709_110678661	3300025935	Miscanthus Rhizosphere	MRLELSDGTRLMLDATVDSEHVEWRRLGRRRTAVSVSEATRLAGDEFADYVAVRTRAEAEWLRAVSDWYREEADCLQGE
Ga0207651_112024192	3300025960	Switchgrass Rhizosphere	LRGDEPKRLELSDGSRLALDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYSGYVTVRTRAEVEWLRAVADWYRQQADRLQGELAEAGVV
Ga0207712_115599571	3300025961	Switchgrass Rhizosphere	MADERVRGASLLGDEPKRLELSDGSRLILDGSAEADRIEWRRLGRGWTNVSVSEAVHLAGDEFADYVAVRTRAEAEWLRTLSDWYRHQAERLEDQLSEAR
Ga0207640_114167441	3300025981	Corn Rhizosphere	EAPMRLELSDGTRLMLDATVDSEHVEWRRLGRRRTAVSVSEATRLAGDEFADYVAVRTRAEAEWLRAVSDWYREEADRLQGELADTRA
Ga0207708_102143201	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LRGDEPKRLELSDGSRLALDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV
Ga0207708_119074071	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MADERVHGASLLGEEPKRLELSDGSRLILDGSAEADRIEWRRLGRGWTNVSVSEAVHLAGDEFADYVAVRTRAEAEWLRTLSDWYRHQAE
Ga0207648_120023841	3300026089	Miscanthus Rhizosphere	SRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGV
Ga0209468_11746341	3300026306	Soil	MAEDRIRGREPPGGDPRHIRGTELLGGDPQRLELSDGSRLMLDGSSDHDRVRWRRLGRRRSSVSVAEAVDLAGAEFGDYVAIRTRAEAAWLRAVADWYREQADRLQRELAEAGAGA
Ga0209813_103071812	3300027866	Populus Endosphere	MADGRVKGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRAVADWYRQQADRLQGELAEAGA
Ga0209382_117655581	3300027909	Populus Rhizosphere	ELSDGSRLILDGSAEADRIEWRRLGRGWTNVSVSEAVHLAGDEFADYVAVRTRAEAEWLRTLSDWYRHQAERLEDQLSEAR
Ga0247822_104699032	3300028592	Soil	MADERVRGASLLGDEPKRLELSDGSRLILDGSAEADRIEWRRLGRGWTNVSVSEAVHLAGDEFADYVAVRTRAEAEWLRTLSDWYRHQAERLEDQLAQAR
Ga0247821_104178591	3300028596	Soil	MADERVRGASLLGDEPKRLELSDGSRLILDGSAEADRIEWRRLGRGWTNVSVSEAVHLAGDEFADYVAVRTRAEAEWLRTLSDWYRHQAERLEDQLAQ
Ga0307319_102574311	3300028722	Soil	MEEDIRGTSLRGDEPKRLELSDGSRLMLDAGAGDRGTAWRRLGRRPHTSVSVAEALDLAGDEFADYVEVRTRAEVEWLRAVADWYRQRADRLQSQLADMHA
Ga0307297_102064811	3300028754	Soil	MAEERVRGTSLRGDEPKRLELSDGSRLMLDAASDEDRKVWRRLGRGHTSVSVTEAAELAGTEFGEYVEVRTRAEVEWLRAVADWYRERATRLEAQLGDLATAP
Ga0247826_106102151	3300030336	Soil	MADVRVRGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV
Ga0308201_103958491	3300031091	Soil	MADQQVRGFALRGDEPQRLELSDGSRLMLDGESGEDRTEWRRLGRRHSNLSVSEAADLAGDDYTEYVEVRTRAEVEWLRAVADWYCQRADGLQRQLADAKA
Ga0170824_1023839331	3300031231	Forest Soil	REMADGRVKGLTLRGDEPKRLELSDGSRLALDATCDRDRSEWRRLGRRRSRLSVADAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGA
Ga0170819_131358292	3300031469	Forest Soil	ADGRVKGLTLRGDEPKRLELSDGSRLALDATCDRDRSEWRRLGRRRSRLSVADAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGA
Ga0310886_105668061	3300031562	Soil	KRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV
Ga0310813_111136272	3300031716	Soil	VKGLTLRGDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIVLAGDEYAGYVTVRTRAEVEWLRAVADWYRQQADRLQGELAEAGA
Ga0307469_111311762	3300031720	Hardwood Forest Soil	GDEPKRLELSDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV
Ga0310906_114207932	3300032013	Soil	SDGSRLTLDATSDRDRSEWRRLGRRRSRMSVSDAIALAGDEYAGYVTVRTRAEVEWLRTVADWYRQQADRLQGELAEAGVV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058968

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences