Metagenome / Metatranscriptome Family F059097

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059097
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	49 residues
Representative Sequence	GHAVSEETDEYLMTEGGLRSEHFSEARLRSLVGDCTIRPLADIAYVVTF
Number of Associated Samples	109
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.47 %
% of genes near scaffold ends (potentially truncated)	88.81 %
% of genes from short scaffolds (< 2000 bps)	88.06 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.328 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (18.657 % of family members)
Environment Ontology (ENVO)	Unclassified (26.866 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.239 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.39% β-sheet: 23.38% Coil/Unstructured: 66.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF01878	EVE	3.73
PF10431	ClpB_D2-small	3.73
PF04993	TfoX_N	2.99
PF03551	PadR	2.24
PF06348	DUF1059	2.24
PF08241	Methyltransf_11	2.24
PF02604	PhdYeFM_antitox	1.49
PF01979	Amidohydro_1	1.49
PF04055	Radical_SAM	1.49
PF00903	Glyoxalase	1.49
PF01551	Peptidase_M23	1.49
PF13683	rve_3	1.49
PF11026	DUF2721	1.49
PF13011	LZ_Tnp_IS481	0.75
PF01546	Peptidase_M20	0.75
PF09976	TPR_21	0.75
PF13180	PDZ_2	0.75
PF01402	RHH_1	0.75
PF08837	DUF1810	0.75
PF13701	DDE_Tnp_1_4	0.75
PF09900	DUF2127	0.75
PF07045	DUF1330	0.75
PF13594	Obsolete Pfam Family	0.75
PF04072	LCM	0.75
PF08327	AHSA1	0.75
PF13401	AAA_22	0.75
PF02661	Fic	0.75
PF00589	Phage_integrase	0.75
PF12706	Lactamase_B_2	0.75
PF12543	DUF3738	0.75
PF03965	Penicillinase_R	0.75
PF09720	Unstab_antitox	0.75
PF13560	HTH_31	0.75
PF13649	Methyltransf_25	0.75
PF11716	MDMPI_N	0.75
PF01872	RibD_C	0.75
PF00753	Lactamase_B	0.75
PF12704	MacB_PCD	0.75
PF02746	MR_MLE_N	0.75
PF07883	Cupin_2	0.75
PF00291	PALP	0.75
PF12697	Abhydrolase_6	0.75
PF02639	DUF188	0.75
PF04185	Phosphoesterase	0.75
PF01527	HTH_Tnp_1	0.75
PF12867	DinB_2	0.75
PF03061	4HBT	0.75
PF01925	TauE	0.75
PF00196	GerE	0.75
PF13561	adh_short_C2	0.75
PF01436	NHL	0.75
PF00293	NUDIX	0.75
PF12358	DUF3644	0.75
PF13376	OmdA	0.75
PF13483	Lactamase_B_3	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG1673	Predicted RNA-binding protein, contains PUA-like EVE domain	General function prediction only [R]	3.73
COG2947	Predicted RNA-binding protein, contains EVE domain	General function prediction only [R]	3.73
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.99
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	2.99
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	2.24
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	2.24
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.49
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.49
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.49
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.75
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.75
COG1671	Uncharacterized conserved protein YaiI, UPF0178 family	Function unknown [S]	0.75
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.75
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.75
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.75
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.75
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.75
COG5579	Uncharacterized conserved protein, DUF1810 family	Function unknown [S]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.33 %
Unclassified	root	N/A	15.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.33 %
Unclassified	root	N/A	15.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.33 %
Unclassified	root	N/A	15.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.67 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	13.43 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	5.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.48 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.99 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.96 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	5.22 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.99 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.75 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.75 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.96 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2.99 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.49 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.75 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.75 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.96 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	2.24 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.49 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.75 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.24 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.49 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.24 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.49 %
Brevifollis	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Brevifollis	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.96 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.24 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.49 %
Brevifollis gellanilyticus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Brevifollis → Brevifollis gellanilyticus	0.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.75 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001305\|C688J14111_10302455	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300002560\|JGI25383J37093_10019980	All Organisms → cellular organisms → Bacteria	2242	Open in IMG/M
3300002562\|JGI25382J37095_10070018	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300002568\|C688J35102_118782804	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300002912\|JGI25386J43895_10196116	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300004020\|Ga0055440_10013025	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300004156\|Ga0062589_102155928	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005332\|Ga0066388_104644118	Not Available	699	Open in IMG/M
3300005336\|Ga0070680_101945593	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005338\|Ga0068868_101314644	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005440\|Ga0070705_100748621	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300005467\|Ga0070706_101320594	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300005468\|Ga0070707_100951206	Not Available	824	Open in IMG/M
3300005471\|Ga0070698_100586095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1055	Open in IMG/M
3300005518\|Ga0070699_100807561	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	858	Open in IMG/M
3300005518\|Ga0070699_100829268	Not Available	846	Open in IMG/M
3300005549\|Ga0070704_100436462	Not Available	1124	Open in IMG/M
3300005554\|Ga0066661_10786440	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300005561\|Ga0066699_10955314	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300005587\|Ga0066654_10811315	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005598\|Ga0066706_10389029	All Organisms → cellular organisms → Bacteria → Proteobacteria	1109	Open in IMG/M
3300005713\|Ga0066905_101179766	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	683	Open in IMG/M
3300005713\|Ga0066905_101482989	Not Available	617	Open in IMG/M
3300005713\|Ga0066905_101865595	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005713\|Ga0066905_101932420	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005764\|Ga0066903_100054737	All Organisms → cellular organisms → Bacteria	4907	Open in IMG/M
3300005764\|Ga0066903_100286753	All Organisms → cellular organisms → Bacteria	2588	Open in IMG/M
3300005764\|Ga0066903_100917380	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300005764\|Ga0066903_103018248	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300005764\|Ga0066903_103419242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	856	Open in IMG/M
3300005842\|Ga0068858_101200797	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300006050\|Ga0075028_100583023	Not Available	662	Open in IMG/M
3300006224\|Ga0079037_100641657	All Organisms → cellular organisms → Bacteria → Proteobacteria	1033	Open in IMG/M
3300006796\|Ga0066665_10560486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	927	Open in IMG/M
3300006854\|Ga0075425_102883631	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300006894\|Ga0079215_11330742	Not Available	557	Open in IMG/M
3300006903\|Ga0075426_10198477	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1454	Open in IMG/M
3300006904\|Ga0075424_100146431	All Organisms → cellular organisms → Bacteria	2502	Open in IMG/M
3300007076\|Ga0075435_100038990	All Organisms → cellular organisms → Bacteria → Proteobacteria	3791	Open in IMG/M
3300007265\|Ga0099794_10079552	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300009012\|Ga0066710_103360058	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300009089\|Ga0099828_10211874	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300009147\|Ga0114129_10231486	All Organisms → cellular organisms → Bacteria	2489	Open in IMG/M
3300009177\|Ga0105248_10840203	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300009661\|Ga0105858_1208660	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Brevifollis → Brevifollis gellanilyticus	577	Open in IMG/M
3300009792\|Ga0126374_10745022	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300010043\|Ga0126380_10262629	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300010046\|Ga0126384_11030201	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300010047\|Ga0126382_11054983	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300010323\|Ga0134086_10492451	Not Available	506	Open in IMG/M
3300010337\|Ga0134062_10256353	Not Available	815	Open in IMG/M
3300010358\|Ga0126370_10163810	All Organisms → cellular organisms → Bacteria	1637	Open in IMG/M
3300010358\|Ga0126370_10818395	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300010360\|Ga0126372_10754537	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300010360\|Ga0126372_10924523	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300010360\|Ga0126372_11649664	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300010361\|Ga0126378_10688630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1134	Open in IMG/M
3300010361\|Ga0126378_12404514	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300010361\|Ga0126378_12620702	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300010362\|Ga0126377_12108894	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300010366\|Ga0126379_11652173	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300010366\|Ga0126379_12602117	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300010376\|Ga0126381_100005004	All Organisms → cellular organisms → Bacteria	14503	Open in IMG/M
3300010376\|Ga0126381_100617612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1544	Open in IMG/M
3300010376\|Ga0126381_102093877	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300010398\|Ga0126383_11814822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	698	Open in IMG/M
3300010398\|Ga0126383_12464486	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300011269\|Ga0137392_11447887	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	546	Open in IMG/M
3300011429\|Ga0137455_1103896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300012189\|Ga0137388_10555352	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300012205\|Ga0137362_10836767	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300012405\|Ga0134041_1107624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300012406\|Ga0134053_1420873	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300012917\|Ga0137395_10717332	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300012931\|Ga0153915_11527515	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300012941\|Ga0162652_100028544	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300012948\|Ga0126375_10086826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1809	Open in IMG/M
3300012948\|Ga0126375_10672771	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300012948\|Ga0126375_11017818	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300012971\|Ga0126369_12141337	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300013297\|Ga0157378_10332892	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300013306\|Ga0163162_11945780	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300013772\|Ga0120158_10510729	Not Available	526	Open in IMG/M
3300014968\|Ga0157379_11669376	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300015356\|Ga0134073_10065004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1010	Open in IMG/M
3300015371\|Ga0132258_10040780	All Organisms → cellular organisms → Bacteria → Acidobacteria	10533	Open in IMG/M
3300015372\|Ga0132256_101448211	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300015373\|Ga0132257_101906618	Not Available	765	Open in IMG/M
3300016319\|Ga0182033_10247915	All Organisms → cellular organisms → Bacteria → Acidobacteria	1445	Open in IMG/M
3300018061\|Ga0184619_10255497	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	806	Open in IMG/M
3300018063\|Ga0184637_10104177	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300018089\|Ga0187774_11384704	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300018468\|Ga0066662_11117657	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	789	Open in IMG/M
3300018482\|Ga0066669_11534394	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300021560\|Ga0126371_10736170	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300022563\|Ga0212128_10285717	Not Available	1037	Open in IMG/M
3300022756\|Ga0222622_10457497	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300025910\|Ga0207684_10528894	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300025922\|Ga0207646_11222009	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300025934\|Ga0207686_10013468	All Organisms → cellular organisms → Bacteria → Acidobacteria	4527	Open in IMG/M
3300025938\|Ga0207704_10691933	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300026121\|Ga0207683_11499014	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300026297\|Ga0209237_1006821	All Organisms → cellular organisms → Bacteria	6872	Open in IMG/M
3300026319\|Ga0209647_1184509	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300026498\|Ga0257156_1134260	Not Available	516	Open in IMG/M
3300027952\|Ga0209889_1101150	Not Available	577	Open in IMG/M
3300028755\|Ga0307316_10158600	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	808	Open in IMG/M
3300028791\|Ga0307290_10336137	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	553	Open in IMG/M
3300028884\|Ga0307308_10206849	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	940	Open in IMG/M
3300031546\|Ga0318538_10240152	All Organisms → cellular organisms → Bacteria → Acidobacteria	972	Open in IMG/M
3300031573\|Ga0310915_11126206	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300031792\|Ga0318529_10310918	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300031793\|Ga0318548_10503413	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300031845\|Ga0318511_10415980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300031879\|Ga0306919_10128231	All Organisms → cellular organisms → Bacteria → Acidobacteria	1825	Open in IMG/M
3300031945\|Ga0310913_10705940	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300032001\|Ga0306922_11555599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300032001\|Ga0306922_11667297	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300032025\|Ga0318507_10418000	Not Available	584	Open in IMG/M
3300032051\|Ga0318532_10159957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300032052\|Ga0318506_10239032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300032067\|Ga0318524_10098566	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300032094\|Ga0318540_10282185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300032261\|Ga0306920_101183692	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300032261\|Ga0306920_101340366	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300033289\|Ga0310914_11308847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300033513\|Ga0316628_100555925	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300033513\|Ga0316628_101319934	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.33%
Host-Associated	Host-Associated	15.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.61%
Plants	Host-Associated → Plants	15.67%
Aquatic	Environmental → Aquatic	6.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.46%
Sediment	Environmental → Aquatic → Sediment	3.73%
Freshwater	Environmental → Aquatic → Freshwater	1.49%
Marine	Environmental → Aquatic → Marine	0.75%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.75%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.97%
Loam	Environmental → Terrestrial → Soil → Loam	17.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.99%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.99%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.49%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.49%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.75%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.75%
Sand	Environmental → Terrestrial → Soil → Sand	0.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.24%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.49%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.49%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.49%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.75%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.75%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.24%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.49%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.49%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.49%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.49%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.75%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.75%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.75%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.75%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.75%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.75%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.75%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.75%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J14111_103024551	3300001305	Soil	TDEYLATDGGFRSEQFSETRLRSIVGACSIRPLAGIAFIVRF*
JGI25383J37093_100199804	3300002560	Grasslands Soil	EWYRRLGHPVVEESTESLMTEGGFRSEHFSEARLRSLVGDCIIHPFAGIAYLVTF*
JGI25382J37095_100700181	3300002562	Grasslands Soil	HPVVEESTESLMTEGGFRSEHFSEARLRSLVGDCIIHPFAGIAYLVTF*
C688J35102_1187828042	3300002568	Soil	ESVPARRDWYSRLGHAVLEETDEYLATDGGFRSEQFSETRLRSIVGACSIRPLAGIAFIVRF*
JGI25386J43895_101961161	3300002912	Grasslands Soil	RRLGHPVVEESTESLMTEGGFRSEHFSEARLRSLVGDCIIHPFAGIAYLVTF*
Ga0055440_100130253	3300004020	Natural And Restored Wetlands	EWYSRLGHAVLEETREYLETEGGFRSEHFSEARLRSFVGDSAIRPLTDMAYVVTF*
Ga0062589_1021559282	3300004156	Soil	VRPRREWYRRLGHAVVAETSEYLESEGGFRSEHFTPERLRGLVGECAIAPLTPIAFAVTF
Ga0070683_1020481681	3300005329	Corn Rhizosphere	ARREWYRRLGHSVTKETAEYLQAEGGFRSEHFDEGRLRSLVGDCSIRPLTSIAHAVTF*
Ga0066388_1046441181	3300005332	Tropical Forest Soil	ARREWYQRFQHVVVEETPEWLVTEGGLRSEHFTEARLRSLVGECTIRPIAGIGYAAVF*
Ga0070680_1019455932	3300005336	Corn Rhizosphere	WYSRLGHSVVRETSEYLESDGGFRSEHFDEDRLRSFVEDCLIRPLTAIAYAVTF*
Ga0068868_1013146442	3300005338	Miscanthus Rhizosphere	SIPARREWYRRLGQDVVNESAECLTTNGGFRSEHFSEDRLRTLVGECTIRPFAGIAYLVLF*
Ga0070705_1007486212	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LGHPVVEESNEFLMSEGGFRSEHFSEARLRSLVGDCVIYPLAGIAYLVKF*
Ga0070706_1013205942	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SVPSRREWYRRLGHAVLEETREYLVTEGGFRSEHFSEARLRSLVGECSIRPLADIAYVVTF*
Ga0070707_1009512062	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VLEETREYLETEEGFRSEHFSEARLRSVVGDSTIRPLTDIAYVVTF*
Ga0070698_1005860951	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	WYGRLGHAVVEESAECLMTEGGLRSEHFTETRLRSLVGDCTIRPCAGIAYIVNF*
Ga0070699_1008075612	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	HTVVRETSEYLESDGGFRSEHFDENRLRRLVGDCLIRPLTAVAYSVTF*
Ga0070699_1008292683	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VVRETSEYLESDGGFRSEHFDENRLRRLVGDCLIRPLTAIAYSVTF*
Ga0070704_1004364623	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VVRETNEYLESDGGFRSEHFDEDRLRSFVEDCLIRPLTAIAYAVTF*
Ga0066661_107864401	3300005554	Soil	RLGHAVLEETREYLETEGGFRSEHFSEARLRGVVSGCTIRPLADIAYVVTF*
Ga0066699_109553141	3300005561	Soil	QETREYLETEGGFRSEHFSEARLRGVVSGCTIRPLADIAYVVTF*
Ga0066654_108113151	3300005587	Soil	LGHAVLEETREYLETEGGFRSEHFSEARLRSLVGDSTIRPLADIAYVVTF*
Ga0066706_103890294	3300005598	Soil	YLVTEGGFRSEHFSEARLRSLVGDCTIRPLTDIAYVVTF*
Ga0066905_1011797661	3300005713	Tropical Forest Soil	EESNEFLMSEGGFRSEHFSEARLRSLVGDCVIYPLAGIAYLVKF*
Ga0066905_1014829891	3300005713	Tropical Forest Soil	LMSEGGFRSEHFSEARLRNLVGECIVRSLAGIAYVVTF*
Ga0066905_1018655951	3300005713	Tropical Forest Soil	RRLGHPVVEESNEFLMSEGGFRSEHFSEARLRSLVGDCVIYPLAGIAYLVKF*
Ga0066905_1019324202	3300005713	Tropical Forest Soil	MSEGGFRSEHFSEARLRSLVGDCVIYPLAGIAYLVKF*
Ga0066903_1000547371	3300005764	Tropical Forest Soil	WYRRLGHTVVQESAEYLMTEGGFRSEHFTKARLQSLVGDCTIRPFADIAYIVTF*
Ga0066903_1002867531	3300005764	Tropical Forest Soil	HPVLEITEEFMVTEGGFRSEHFSEARLRSLVGDCDVQPLGDIAYAVTF*
Ga0066903_1009173801	3300005764	Tropical Forest Soil	EWYRRLGHAVSAQTREYLETEGGFRSEHFSETRLRSLVGDCTICPLTDTAYVVTF*
Ga0066903_1030182482	3300005764	Tropical Forest Soil	HPVVEESTESLMTEGGFRSEHFSEARLRSLVGDCIIHPFVGIAYLVTF*
Ga0066903_1034192421	3300005764	Tropical Forest Soil	NEFLMSEGGFRSEHFSEARLRSLVGDCVIYPLAGIAYLVRF*
Ga0068858_1012007972	3300005842	Switchgrass Rhizosphere	SIPARREWYRSLGQVVVDESDESLTTEGGFRSEHFSEKRLRTLVGECTIRPFADIGYLVLF*
Ga0075028_1005830231	3300006050	Watersheds	GHTVVQESAEYLMTERGFRSEHFTKARLQSLVGDCTIRPHADIAYIVTF*
Ga0079037_1006416571	3300006224	Freshwater Wetlands	LMTEGGFRSEHFSEARLRRLVGDCAIRPFAEIAYLVTF*
Ga0066665_105604861	3300006796	Soil	HPVVEESTESLMTEGGFRSEHFSEARFRSLVGDCIIHPFAGIAYLVTF*
Ga0075425_1028836312	3300006854	Populus Rhizosphere	RLGHAVLEETREYLETEGGFRSEHFSEARLRSLVGDSTIRPLTDIAYVVTF*
Ga0079215_113307421	3300006894	Agricultural Soil	RLGHTVVEESTEFLMTEGGFRSEHFSDARLRSLVGDCVIRPLAAIAYLVTF*
Ga0075426_101984774	3300006903	Populus Rhizosphere	RLGHPVVRETSEYLESDGGFRSEHFDENRLRRLVGDCVIRPLTAIAYSVTF*
Ga0075424_1001464311	3300006904	Populus Rhizosphere	VVNETPESLLTDGGLRSEHFTETRLRSLVGACTIRPLAGIAYAVTF*
Ga0075435_1000389901	3300007076	Populus Rhizosphere	EYLESDGGFRSEHFEENRLRRLVGECVIRPLTGIAYAVTF*
Ga0099794_100795521	3300007265	Vadose Zone Soil	EETREYLESEGGFRSEHFSEARLRSLVGDSTIRPLTDIAYVVTF*
Ga0066710_1033600581	3300009012	Grasslands Soil	VSEETREYLVTAGGFRSEHFSEARLRSLVGECTIRPLAEIAYVVTC
Ga0099828_102118745	3300009089	Vadose Zone Soil	LTDGGFRSEHFSEARLRTLVGDCTIRRLAGIAYVVTF*
Ga0114129_102314864	3300009147	Populus Rhizosphere	SVPARREWYERFGHIVVDESSEWLLTEGGLRSEHFSEARLRSIVGECTIRPLADVAYIVRF*
Ga0105248_108402031	3300009177	Switchgrass Rhizosphere	REWYRRLGHVVVEESTECLMTEGGFRSEHFSEARLRSLVGECTIQPLAGIAYVVTF*
Ga0105858_12086602	3300009661	Permafrost Soil	IPARREWYRRLGHVVTEESAESLVTEGGFRSEHFSEARLRQLVGDCTIRPLAGIAYFVTF
Ga0126374_107450221	3300009792	Tropical Forest Soil	RRLGHAVIEESDEHLTTEGGFRSEHFTETRLRHLVGDCTIRPLAGIAYVVTF*
Ga0126380_102626292	3300010043	Tropical Forest Soil	YRRLGHPVVEESNEFLMSEGGFRSEHFSEARLRSLVGDCVIYPLAGIAYLVKF*
Ga0126384_110302012	3300010046	Tropical Forest Soil	MEESTESLMTEGGFRSEHFSEARLRNLVGDCIIHPFAGVAYLVKF*
Ga0126382_110549831	3300010047	Tropical Forest Soil	EFLMSEGGFRSEHFSEARLRSLVGDCVIYPLAGIAYLVKF*
Ga0134086_104924512	3300010323	Grasslands Soil	VLEETREYLVTAGGFRSEHFSEASLRSLVGECTIRPLAEIAYVVTF*
Ga0134062_102563532	3300010337	Grasslands Soil	REWYRRLGHGVLEETREYLATEGGFRSEHFSEARLRNLVGECSIRPLADIAYVVTF*
Ga0126370_101638102	3300010358	Tropical Forest Soil	LELIVLEETDDDLMPEGGFRSEHFSEARLRSLVGECAVRPLASIAYVVTF*
Ga0126370_108183951	3300010358	Tropical Forest Soil	EYLETEGGFRSEHFSETRLRSLVGDCTICPLTDTAYVVTF*
Ga0126372_107545373	3300010360	Tropical Forest Soil	LEITEEFMVTEGGFRSEHFSEARLRALVGDCDVQPLVDIAYAVTF*
Ga0126372_109245233	3300010360	Tropical Forest Soil	GGFRSEHFTETRLRHLVGDCTIRPLAGIAYVVTF*
Ga0126372_116496642	3300010360	Tropical Forest Soil	VVEESNEFLMSEGGFRSEHFSEARLRSLVGDCVIHPLAGIAYLVKF*
Ga0126378_106886303	3300010361	Tropical Forest Soil	EYLVTEGGFRSEHFSEARLQSLVGECTIRPLADIAYVVTF*
Ga0126378_124045141	3300010361	Tropical Forest Soil	YLVTEGGFRSEHFSEARLQDLVGDCAIRPLADIAYVVTF*
Ga0126378_126207021	3300010361	Tropical Forest Soil	RLGHTVVQESAEYLMTEGGFRSEHFTKARLQSLVGDCTIRPCADIAYIVTF*
Ga0126377_121088942	3300010362	Tropical Forest Soil	YRRLGHPVVEESTESLMTEGGFRSEHFSEARLRSLVGDCVIYPLAGIAYLVKF*
Ga0126379_116521732	3300010366	Tropical Forest Soil	EETDDYLMTEGGFRSEHFREARLRSLVGECAVSPLAGIAYVVTF*
Ga0126379_126021171	3300010366	Tropical Forest Soil	REYLVTEGGFRSEHFSEARLRSLVGDCTIRPITDTAYVVTF*
Ga0126381_10000500415	3300010376	Tropical Forest Soil	EWYRRLGHTVVQESAEYLMTEGGFRSEHFTKARLQSLVGDCTIRPCADIAYIVTF*
Ga0126381_1006176123	3300010376	Tropical Forest Soil	ESAEYLMTDGGLRSEHFTKARLQSLVGDCTICPCGDIAYIVTF*
Ga0126381_1020938771	3300010376	Tropical Forest Soil	REWYRRLGHTVVQESAEYLMTEGGFRSEHFTKARLQSLVGDCTIRLCADIAYIVTF*
Ga0126383_118148221	3300010398	Tropical Forest Soil	PVLEVTEEFMVTEGGFRSEHFSEARLRALVGDCEVQPLVDIAYAVTF*
Ga0126383_124644861	3300010398	Tropical Forest Soil	YAEASVAARCEWYRRFGHTVVQESAEYLMTEGGVRSEHFTKARLQSLVGDCTIRPCADIAYIVTF*
Ga0137392_114478872	3300011269	Vadose Zone Soil	AVSEETGEYLMTEGGLRSEHFSEARLRSLVGALTIRPLAEIAYVVTF*
Ga0137455_11038962	3300011429	Soil	YRRLGHAVVGQTDEYLMTDGGLRSEHFSDARLRRLVGECTIRPVTDIARVVRF*
Ga0137388_105553524	3300012189	Vadose Zone Soil	EVADEFILTEGGFRSEHFSEARLRDLVGACVVRPLAEIAYVVTF*
Ga0137362_108367672	3300012205	Vadose Zone Soil	WYRRLGHAVSEETGEYLMTEGGLRSEHFSEARLRSLVGECTIRPLADIAYVVTF*
Ga0134041_11076241	3300012405	Grasslands Soil	GHIVVDESSEWLLTEGGLRSEHFSEARLRSIVGECTIRPLADVAYIVRF*
Ga0134053_14208731	3300012406	Grasslands Soil	RRLGHAVLQESREYLETEGGFRSEHFSETRLRSLVGECTIRSLTDIAYVVMF*
Ga0137395_107173322	3300012917	Vadose Zone Soil	GHAVSEETDEYLMTEGGLRSEHFSEARLRSLVGDCTIRPLADIAYVVTF*
Ga0153915_115275151	3300012931	Freshwater Wetlands	TEGGFRSEHFSEARLRSLVGDSTIRQLTDIAYVVTF*
Ga0162652_1000285442	3300012941	Soil	VSEETAEYLETEGGLVSEHFSEARLRSLVGDCTIHPLADIAYVVRF*
Ga0126375_100868261	3300012948	Tropical Forest Soil	WYRRLGHPVVEESNEFLMSEGGFRSEHFSEARLRSLVGDGVIYPLAGIAYLVRF*
Ga0126375_106727712	3300012948	Tropical Forest Soil	LEHVVPEETDDYLMTEGGFPSEHFSEARLRSRVGECAVHPLASIAY
Ga0126375_110178181	3300012948	Tropical Forest Soil	EWYQRLGHEVLEVTNEFILTKGGFRSEHFSETRLRELVGDCVVRPLTEIAYVVTF*
Ga0126369_121413372	3300012971	Tropical Forest Soil	EETDDYLMTEGGFRSEHFSEARLRSLVGECAVRPLAGIAYVVTF*
Ga0157378_103328921	3300013297	Miscanthus Rhizosphere	LTTNGGFRSEHFSEDRLRTLVGECTIRPFAGIAYLVLF*
Ga0163162_119457802	3300013306	Switchgrass Rhizosphere	RREWYRRLGQDVAEESAECLITEGGFRSEHFSEARLRTLIGECTIRPFAGVAYLVLF*
Ga0120158_105107291	3300013772	Permafrost	KDEYLLTDGGLRSEHFSDGRLQALIGDCTIRPVTDIARAVTF*
Ga0157379_116693762	3300014968	Switchgrass Rhizosphere	GGFRSEHFSEDRLRTLVGECTIRPFAGIAYLVLF*
Ga0134073_100650041	3300015356	Grasslands Soil	IPARREWYRRFGHAVVAESAEYLTTDGGLRSEHFTETRLRSLVGDCTVHPLAGIAYIVRF
Ga0132258_1004078015	3300015371	Arabidopsis Rhizosphere	YRRFGHPVIEESAEWLMTEGGLRSEHFTEARLRALIGDCTMYPCTDIGYIVRF*
Ga0132258_102782123	3300015371	Arabidopsis Rhizosphere	YRRFGHPVIEESAEWLMTEGGLRSEHFTEARLRALIGDCTIYPCTDIGYIVRF*
Ga0132256_1005097171	3300015372	Arabidopsis Rhizosphere	VIEKSAEWLMTEGSLRSEHFTETRLRALIGDCTIYPCTDIGYIVRF*
Ga0132256_1014482114	3300015372	Arabidopsis Rhizosphere	LETEGGFRSEHFSEARLRSLVGDSTIRPLTDIAYVVMF*
Ga0132257_1019066181	3300015373	Arabidopsis Rhizosphere	ETEGGFRSEHFSEARLRSLVGDSTIRPLTDNAYVVTF*
Ga0132255_1003212103	3300015374	Arabidopsis Rhizosphere	RRFGHPVIEESAEWLMTEGGLRSEHFTEARLRALIGDCTIYPCTDIGYIVRF*
Ga0132255_1052467952	3300015374	Arabidopsis Rhizosphere	AAASVPARREWYRRLGHAIAVESPEFLMTDGGLRSEHFTEARLRALVGDCAIHRCTNMGYVVRF*
Ga0182033_102479154	3300016319	Soil	MTEAGFRSEHFTKARLQSLVGDCTIRPCADIAYIVTF
Ga0184619_102554974	3300018061	Groundwater Sediment	YRRLGHAVVEQTTEYLLTDGGLRSEHFSDARLRSLVGDCTIRPVADIARVVTF
Ga0184637_101041773	3300018063	Groundwater Sediment	EWYRRLGHAVLEETDEYLLTDGGLRSEHFSDARLRTLIGDCTIRPVADIARAVTF
Ga0187774_113847042	3300018089	Tropical Peatland	SVLPRREWYRRLGHPVVEESPESLMTEGGFRSEHFSEARLRSLVGDCVIRPFAGIAYLVT
Ga0066662_111176572	3300018468	Grasslands Soil	YLETEGGFRSEHFSETRLRSLVGECTIRSLTDIAYVVMF
Ga0066669_115343942	3300018482	Grasslands Soil	AARRRGEWYRRFGHDVVEESEEWLMTDGGLRSEHFSEARLRSIVGECTIRPLAGIGHIVS
Ga0126371_107361702	3300021560	Tropical Forest Soil	VPARREWYRRLELIVLEETDDDLMPEGGFRSEHFSEARLRSLVGECAVRPLASIAYVVTF
Ga0212128_102857171	3300022563	Thermal Springs	EETREHLVTDGGFRSEHFSEARLRSLVGECAIRPLTAIAWAVTF
Ga0222622_104574971	3300022756	Groundwater Sediment	SVAARREWYRRLGHAVLEETDEYLVTDGGLRSEHFSDARLRRLVGECTIRSLADIARVVT
Ga0207684_105288943	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LMTEGGFRSEHFTETRLRALVGHCIIRPFARIAYLVTF
Ga0207646_112220092	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TAGGLRSEHFTEARLRSLVGDCTITRCTDIGYTVTF
Ga0207686_100134681	3300025934	Miscanthus Rhizosphere	LTTNGGFRSEHFSEDRLRTLVGECTIRPFAGIAYLVLF
Ga0207704_106919332	3300025938	Miscanthus Rhizosphere	SLGQVVVDESDESLTTEGGFRSEHFSEKRLRTLVGECTIRPFADIGYLVLF
Ga0207683_114990141	3300026121	Miscanthus Rhizosphere	MSEIVFVVEESPECLMTEGGFRSEHFSEARLRSLVGECTIQPLAGIAYVVTF
Ga0209237_10068219	3300026297	Grasslands Soil	MTEGGFRSEHFSEARLRSLVGDCIIHPFAGIAYLVTF
Ga0209647_11845091	3300026319	Grasslands Soil	SETSIPARREWYRRFGHAVAEESSEYLVTGGGLRSEHFSEARLRALVGDCAIRPLAGVAYAVTF
Ga0257156_11342601	3300026498	Soil	PSRREWYSRLGHAVLEETREYLESEGGFRSEHFSEARLRSLVGDSTIRPLTDIAYVVTF
Ga0209889_11011502	3300027952	Groundwater Sand	LEITDEFIATEGGFRSEHFSEARLRSLVGDCDVQPLVDIAYAVTF
Ga0307316_101586003	3300028755	Soil	RRLGHAVVEETPEYLLTDGGLRSEHFSDARLRSLIGDCSIRPIADIARAVTF
Ga0307290_103361371	3300028791	Soil	RREWYRRLGHAIVEQTDEYLVTDGGLRSEHFSDARLLGLVGDCAIRPVADIARAVTF
Ga0307308_102068493	3300028884	Soil	GHAVVEETAEYLLTDGGLRSEHFSDARLRRLIGDCTIRPVAGIARAVTF
Ga0318538_102401523	3300031546	Soil	YLMTEAGFRSEHFTKARLQSLVGDCTIRPCADIAYIVTF
Ga0310915_111262061	3300031573	Soil	GHEVLEVTDEFILTKGGLRSEHFSETRLRELVGDCVVRPLTEIAYVVTF
Ga0318529_103109181	3300031792	Soil	MTEGGFRSEHFSEARLRSLVGECAVRPLAGIAYVVTF
Ga0318548_105034131	3300031793	Soil	EESKEFLMSESGFRSEHFSEARLRNLVGECIIRPFAGIAYLVTF
Ga0318511_104159801	3300031845	Soil	LMTEGGFRSEHFTEARLKSLVGDCTIRPCADIAYIVTF
Ga0306919_101282311	3300031879	Soil	LMTEGGFRSEHFTKARLQSLVGDCTIRPCADIAYIVTF
Ga0310913_107059402	3300031945	Soil	TDDYLMTEGGFRSEHFSEARLRSLVGECAVRPLAGIAYVVTF
Ga0306922_115555991	3300032001	Soil	VQESAEYLMTEGGFRSEHFTTARLQSLVGDCTIRPCADIAYIVTF
Ga0306922_116672971	3300032001	Soil	ARREWYRRLGHTVVQESPEYLMTEGGFRSEHFTKARLQSLVGDCTIRPCADIAYIVTF
Ga0310897_100730793	3300032003	Soil	SVTARREWYRRLGHSVIAETAEYLEAEGGFRSEHFSEGRLRELVGDCSIRPLTSIAHAVS
Ga0318507_104180001	3300032025	Soil	WYRRLEHVVLEETDDYLMTEGGFRSEHFSEARLRSLVGECAVRPLAGIAYVVTF
Ga0318532_101599573	3300032051	Soil	AEYLMTEGGFRSEHFTKARLQSLVGDCTIRPCADIAYIVTF
Ga0318506_102390323	3300032052	Soil	VVEESAEYLMTEGGFRSEHFTKARLQSLVGDCTIRPCADIAYIVTF
Ga0318524_100985661	3300032067	Soil	LEHVVLEETDDYLMTEGGFRSEHFSEARLRSLVGECAVRPLAGIAYVVTF
Ga0318540_102821851	3300032094	Soil	LMTDGGFRSEHFTKARLQSLVGDCTIRPCADIAYIVTF
Ga0306920_1011836923	3300032261	Soil	WYRRLGHTVVQESPEYLMTEGGFRSEHFTKARLQSLVGDCTIRPCADIAYIVTF
Ga0306920_1013403662	3300032261	Soil	VPSRHEWYRRLGHAVLEETSEYLVTVGGFRSEHFSEAGLRSLVGDCAIRPLADIAYVVAF
Ga0310914_113088471	3300033289	Soil	LGHAVVEESDDHLMTEGGFRSEHFTKARLRSLVGVCTIRPCTDIAYTVTF
Ga0316628_1005559251	3300033513	Soil	MTEGGFRSEHFSEARLRSLVGDCAIHPFAGIAYLVTF
Ga0316628_1013199341	3300033513	Soil	LGHPVVEESAEDLITEGGFRSEHFSETRLRRLVGDCVIQPFAGIAYLVTF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059097

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences