Metagenome / Metatranscriptome Family F059190

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059190
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	77 residues
Representative Sequence	VTIRLASDGPQTLHADTIGAAWLAVAGLILARGVASRYDGLPVREISLVTLAVDRPDPADEIIARHAEPERLAWMH
Number of Associated Samples	116
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	30.23 %
% of genes near scaffold ends (potentially truncated)	91.79 %
% of genes from short scaffolds (< 2000 bps)	86.57 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.537 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.895 % of family members)
Environment Ontology (ENVO)	Unclassified (23.881 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.672 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.96% β-sheet: 19.23% Coil/Unstructured: 54.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF00583	Acetyltransf_1	5.97
PF02517	Rce1-like	5.97
PF08028	Acyl-CoA_dh_2	4.48
PF00106	adh_short	3.73
PF01408	GFO_IDH_MocA	3.73
PF13561	adh_short_C2	2.99
PF01636	APH	2.99
PF01844	HNH	2.99
PF14065	Pvc16_N	2.24
PF12623	Hen1_L	1.49
PF11799	IMS_C	1.49
PF01594	AI-2E_transport	1.49
PF08241	Methyltransf_11	1.49
PF03162	Y_phosphatase2	1.49
PF07714	PK_Tyr_Ser-Thr	1.49
PF14520	HHH_5	0.75
PF11575	FhuF_C	0.75
PF13359	DDE_Tnp_4	0.75
PF13180	PDZ_2	0.75
PF09346	SMI1_KNR4	0.75
PF01494	FAD_binding_3	0.75
PF00872	Transposase_mut	0.75
PF12706	Lactamase_B_2	0.75
PF01850	PIN	0.75
PF00067	p450	0.75
PF01135	PCMT	0.75
PF09922	DUF2154	0.75
PF10017	Methyltransf_33	0.75
PF00069	Pkinase	0.75
PF05345	He_PIG	0.75
PF02861	Clp_N	0.75
PF02894	GFO_IDH_MocA_C	0.75
PF04185	Phosphoesterase	0.75
PF03807	F420_oxidored	0.75
PF03358	FMN_red	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	8.96
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	5.97
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	5.97
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	4.48
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.49
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.49
COG2365	Protein tyrosine/serine phosphatase Oca4	Signal transduction mechanisms [T]	1.49
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.75
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.75
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.75
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.75
COG2124	Cytochrome P450	Defense mechanisms [V]	0.75
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.75
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.75
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.75
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.75
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.54 %
Unclassified	root	N/A	7.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.54 %
Unclassified	root	N/A	7.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.54 %
Unclassified	root	N/A	7.46 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	86.57 %
Unclassified	root	N/A	7.46 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	85.07 %
Unclassified	root	N/A	7.46 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14.93 %
Unclassified	root	N/A	7.46 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.46 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	2.24 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.24 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.24 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.99 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.99 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.46 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2.24 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.24 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	2.24 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.99 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.99 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.46 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.24 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.24 %
Herbihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Herbihabitans	2.99 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.99 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	1.49 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	0.75 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.46 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	2.24 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.24 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.99 %
Herbihabitans rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Herbihabitans → Herbihabitans rhizosphaerae	2.99 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	1.49 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.75 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.46 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2.24 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.24 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.99 %
Herbihabitans rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Herbihabitans → Herbihabitans rhizosphaerae	2.99 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	1.49 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.75 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10280021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	608	Open in IMG/M
3300001454\|JGI20204J15135_1003266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Herbihabitans → Herbihabitans rhizosphaerae	1628	Open in IMG/M
3300004082\|Ga0062384_100238268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1097	Open in IMG/M
3300004091\|Ga0062387_101266150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300004091\|Ga0062387_101761501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300004635\|Ga0062388_102690277	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005168\|Ga0066809_10240734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300005187\|Ga0066675_11129574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	584	Open in IMG/M
3300005434\|Ga0070709_11697572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300005435\|Ga0070714_102211681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300005436\|Ga0070713_101333518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	695	Open in IMG/M
3300005471\|Ga0070698_101223028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	701	Open in IMG/M
3300005537\|Ga0070730_10220308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1260	Open in IMG/M
3300005591\|Ga0070761_10521104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	735	Open in IMG/M
3300005602\|Ga0070762_10892464	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300005610\|Ga0070763_10144629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1237	Open in IMG/M
3300005610\|Ga0070763_10724779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	584	Open in IMG/M
3300005764\|Ga0066903_108146551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300005921\|Ga0070766_10050845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2328	Open in IMG/M
3300005952\|Ga0080026_10252170	Not Available	533	Open in IMG/M
3300006028\|Ga0070717_10711572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	912	Open in IMG/M
3300006028\|Ga0070717_11587036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300006175\|Ga0070712_101426002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	604	Open in IMG/M
3300006604\|Ga0074060_12031897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300009098\|Ga0105245_11376245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	755	Open in IMG/M
3300009520\|Ga0116214_1378468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	550	Open in IMG/M
3300009521\|Ga0116222_1154093	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300009523\|Ga0116221_1090292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1363	Open in IMG/M
3300009524\|Ga0116225_1171141	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300009525\|Ga0116220_10517412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300009683\|Ga0116224_10251320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300009698\|Ga0116216_10689691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	614	Open in IMG/M
3300009839\|Ga0116223_10168477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1353	Open in IMG/M
3300010043\|Ga0126380_10515596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	921	Open in IMG/M
3300010048\|Ga0126373_10587943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1165	Open in IMG/M
3300010361\|Ga0126378_10706181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1120	Open in IMG/M
3300010371\|Ga0134125_12463184	All Organisms → cellular organisms → Bacteria → Terrabacteria group	566	Open in IMG/M
3300010376\|Ga0126381_100338194	All Organisms → cellular organisms → Bacteria	2076	Open in IMG/M
3300010379\|Ga0136449_102244666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	794	Open in IMG/M
3300010396\|Ga0134126_11871298	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300010866\|Ga0126344_1083993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	532	Open in IMG/M
3300010866\|Ga0126344_1333888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Herbihabitans → Herbihabitans rhizosphaerae	568	Open in IMG/M
3300010867\|Ga0126347_1493917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	697	Open in IMG/M
3300010869\|Ga0126359_1429563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Herbihabitans → Herbihabitans rhizosphaerae	608	Open in IMG/M
3300010876\|Ga0126361_10678131	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300012202\|Ga0137363_10164995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1752	Open in IMG/M
3300012205\|Ga0137362_10518084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1031	Open in IMG/M
3300012362\|Ga0137361_10478418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300012476\|Ga0157344_1025998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300012984\|Ga0164309_11383644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300012986\|Ga0164304_11694354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300013296\|Ga0157374_11343618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	737	Open in IMG/M
3300013307\|Ga0157372_11942422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300014150\|Ga0134081_10357598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300014838\|Ga0182030_10046847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7008	Open in IMG/M
3300016357\|Ga0182032_10927058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	741	Open in IMG/M
3300017932\|Ga0187814_10004245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5744	Open in IMG/M
3300017937\|Ga0187809_10208372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	695	Open in IMG/M
3300017973\|Ga0187780_10006270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8844	Open in IMG/M
3300018001\|Ga0187815_10276242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	711	Open in IMG/M
3300018001\|Ga0187815_10392469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300018038\|Ga0187855_10265011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1007	Open in IMG/M
3300020580\|Ga0210403_10881893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300020582\|Ga0210395_10616976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	813	Open in IMG/M
3300020582\|Ga0210395_10923920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	648	Open in IMG/M
3300021088\|Ga0210404_10088521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1540	Open in IMG/M
3300021168\|Ga0210406_10136733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2063	Open in IMG/M
3300021178\|Ga0210408_10003780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13800	Open in IMG/M
3300021180\|Ga0210396_10145262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2132	Open in IMG/M
3300021403\|Ga0210397_11320068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300021405\|Ga0210387_11873186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300021406\|Ga0210386_11484399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300021432\|Ga0210384_10962787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	755	Open in IMG/M
3300021474\|Ga0210390_11310588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300021475\|Ga0210392_10538782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	862	Open in IMG/M
3300021475\|Ga0210392_11324071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300021477\|Ga0210398_11080887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	638	Open in IMG/M
3300021478\|Ga0210402_10735653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	910	Open in IMG/M
3300021559\|Ga0210409_10132100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2292	Open in IMG/M
3300021559\|Ga0210409_10564824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1004	Open in IMG/M
3300021559\|Ga0210409_10796883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	817	Open in IMG/M
3300021559\|Ga0210409_11351863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300021559\|Ga0210409_11394953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300021860\|Ga0213851_1361652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	933	Open in IMG/M
3300025504\|Ga0208356_1097011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Herbihabitans → Herbihabitans rhizosphaerae	560	Open in IMG/M
3300025906\|Ga0207699_11342635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300025939\|Ga0207665_11103285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	633	Open in IMG/M
3300025939\|Ga0207665_11224146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300025945\|Ga0207679_11147273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	713	Open in IMG/M
3300025981\|Ga0207640_11916559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	536	Open in IMG/M
3300026078\|Ga0207702_10334334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1446	Open in IMG/M
3300026095\|Ga0207676_10250462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1594	Open in IMG/M
3300026356\|Ga0257150_1022245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	894	Open in IMG/M
3300026481\|Ga0257155_1029356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	816	Open in IMG/M
3300026899\|Ga0209326_1001053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2408	Open in IMG/M
3300027725\|Ga0209178_1056236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1268	Open in IMG/M
3300027842\|Ga0209580_10134011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1213	Open in IMG/M
3300027879\|Ga0209169_10553169	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300027905\|Ga0209415_10044874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5856	Open in IMG/M
3300028381\|Ga0268264_10493944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1192	Open in IMG/M
3300028720\|Ga0307317_10088951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1017	Open in IMG/M
3300028807\|Ga0307305_10134824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1140	Open in IMG/M
3300028906\|Ga0308309_10806111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	816	Open in IMG/M
3300028906\|Ga0308309_11218880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	648	Open in IMG/M
3300029882\|Ga0311368_10742203	Not Available	674	Open in IMG/M
3300029910\|Ga0311369_10145400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2295	Open in IMG/M
3300029910\|Ga0311369_11429964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300030580\|Ga0311355_10287447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	1660	Open in IMG/M
3300030659\|Ga0316363_10358855	All Organisms → cellular organisms → Bacteria → Terrabacteria group	573	Open in IMG/M
3300030707\|Ga0310038_10066651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1972	Open in IMG/M
3300031027\|Ga0302308_10848935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300031152\|Ga0307501_10183055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	589	Open in IMG/M
3300031681\|Ga0318572_10026298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	2981	Open in IMG/M
3300031708\|Ga0310686_106195609	Not Available	532	Open in IMG/M
3300031708\|Ga0310686_115640136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	631	Open in IMG/M
3300031715\|Ga0307476_10870997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	665	Open in IMG/M
3300031747\|Ga0318502_10951497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	523	Open in IMG/M
3300031859\|Ga0318527_10272976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	719	Open in IMG/M
3300031893\|Ga0318536_10081931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1601	Open in IMG/M
3300031941\|Ga0310912_11188007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	581	Open in IMG/M
3300032074\|Ga0308173_11784447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300032160\|Ga0311301_11371106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	885	Open in IMG/M
3300032160\|Ga0311301_11599219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	793	Open in IMG/M
3300032174\|Ga0307470_10321785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1059	Open in IMG/M
3300032828\|Ga0335080_11071492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	817	Open in IMG/M
3300032892\|Ga0335081_11478373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	754	Open in IMG/M
3300032895\|Ga0335074_10368725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1582	Open in IMG/M
3300032895\|Ga0335074_10505156	Not Available	1253	Open in IMG/M
3300034282\|Ga0370492_0156227	Not Available	932	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.54%
Host-Associated	Host-Associated	7.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.33%
Aquatic	Environmental → Aquatic	8.21%
Plants	Host-Associated → Plants	7.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.60%
Freshwater	Environmental → Aquatic → Freshwater	8.21%
Peat	Environmental → Terrestrial → Peat	3.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.70%
Loam	Environmental → Terrestrial → Soil → Loam	14.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.46%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.99%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.73%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.49%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.49%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.90%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.22%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	4.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.73%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.49%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.49%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.49%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.49%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.75%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.75%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.75%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001454	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026899	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_102800212	3300001356	Peatlands Soil	VAGRILAGGTASAYDGRPVREISHVTLAVDHPDPEDEIIARLAEPDRLAWMHANFTNHSAVAALVLAGEARCTRRXXX*
JGI20204J15135_10032664	3300001454	Arctic Peat Soil	MTTPPAPGEPEILRADTIGGAWFAVAGRIVADGLPSRYDEQPIREISLVTLAIARPDPDDEIIARHAEPVRLAWMHANFTDR
Ga0062384_1002382683	3300004082	Bog Forest Soil	VTARLARGDPQTLHAATIGAAWLAVAERILADGTASTYDGRPVREISLVTLAVEHPDPADEIIARHA
Ga0062387_1012661502	3300004091	Bog Forest Soil	VTIRLASDGPQTLHADTIGAAWLAVAGRILAEGIASRYDGLPVREISLVTLAIGRPDPADEIIAARAEPERLAWMHANFTDHAKV
Ga0062387_1017615011	3300004091	Bog Forest Soil	VTIRLASDGPQTLHADTIGAAWLAVAGRILAEGITSRYDGLPVREISLVTLAVDRPDPDDEIIASRAEPERL
Ga0062388_1012403251	3300004635	Bog Forest Soil	VTIPLAADDPRVLHAATLGEGWLAVAERILDDGTASSYDGRPVSEISHVTLAVELPDP
Ga0062388_1026902772	3300004635	Bog Forest Soil	VVTTRLALDEPHVLRSDGIGGAWLAVAARIAASGVPSRYDELPVREISLVTLAVARPDPDDEVIARHAEPERLAWMHANFT
Ga0066809_102407341	3300005168	Soil	VTIRLASDGPQTVRADTIGAAWLAVAGRILTEGIESRYDGLPVREISLVTLVVDHPRPADEIIATHAEPERLAWMHANFTEHAVVAA
Ga0066675_111295741	3300005187	Soil	VTIRLASDGPQTVRADTIGAAWLAVAQRILTEGVESRYDGLPVREISLVTLVVDHPGPADEIIARH
Ga0070709_116975721	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VTIRLASDGPQTVRADTIGAAWLAVAQRILTEGVESRYDGLPVREISLVTLVVDHPGPADEIIAAH
Ga0070714_1022116812	3300005435	Agricultural Soil	VTIRLASDGPQTVRADTIGAAWLAVAQRILTEGVESRYDGLPVREISLVTLVVDHPGPADEIIAAHAEPERLAWM
Ga0070713_1013335182	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VVTIRLAADGPQLIQADTLGAAWLAIAGRILAQGVASQYDGLAVSEISLVTLVVERPDPADEVIARHADPERLAWMHANFTDYARVTALGGC*
Ga0070698_1012230281	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VTIRLASDGPQTVRADTIGAAWLAVAGRILAEGVESRYDGLPVREISLVTLVVEHPAAADEIIARHAQPERLAWMH
Ga0070730_102203081	3300005537	Surface Soil	VTTPLAGDEPSILAAPTIGAAWLGVAGRILDKGIDTRYDGRPVREISLVTLAVSRPDPDDEIIARYAEPERLAWMHANFTDRAQVAALGGA
Ga0070761_105211042	3300005591	Soil	VTTPLASDGPQTLRAATIGGAWLAVARRILADGVASRYDERPVREISLVTLVVDRPDPDDEIIARYAEPERLAWMHANFTD
Ga0070762_108924641	3300005602	Soil	VTARLARDDPQTLHAATIGAAWLTVAERILADGTVSTYDGRPVREIAHVTLAVEHPDPADEIIARHAEPERLAWMHA
Ga0070763_101446291	3300005610	Soil	VTTRLALDEPPVLRADGIGGAWLAVAAEIAASGVPSRYDELPVREISLVTLAVARPDPDDEVIARHAEPERLAWMHANFTDHAAVAEL
Ga0070763_107247792	3300005610	Soil	MTTRLAPGEPQILRAGTTGGAWLAVAGRIVADGVPGRYDEQPIREISLVTLVIAQPDPDDEIIARHAEPERLAWMHA
Ga0066903_1081465511	3300005764	Tropical Forest Soil	MHSAEPQILHAATIGAAWLGVARRILADGILSRYDDLPVREISLVTLAVSRPSPEDEIIAGYADPERLAWMHANFT
Ga0070766_100508454	3300005921	Soil	VTVGLARDDPQTLHAATIGQAWLAVAERILADGTASAYDGLPVREISHVTLCVERPDPDDEIIAQLAEPERLAWMH
Ga0080026_102521702	3300005952	Permafrost Soil	VAVELARDRPEILYADTIGAAWLAVAGRILADGIASRYDGLAAREKSLVTLAVVAPDPDDDLIARYAEP
Ga0070717_107115722	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTIRLASDGPQTVRAETIGAAWLAVAGRILAEGVESRYDGLPVREISLVTLVVDRPAPTDEIIARHAEPERLAWMHANFTEHATVAAL
Ga0070717_115870361	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTPLAGDEPSILDAPTIGAAWLGVAGRILDKGIETRYDGLPVREISLITLAVSRPNPDDEIIARHAEPERLAWMHANFTDR
Ga0070712_1014260021	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VTIRLASDGPQTVRTDTIGAAWLAVAQRILTEGVESRYDGLPVREISLVTLVVDHPGPADEIIAAHAEPERLAWMHANF
Ga0074060_120318971	3300006604	Soil	VTIRLASDGPQTVRADTIGAAWLAVAQRILTEGVESRYDGLPVREISLVTLVVDHPGPADEIIAAHAEPERLAWMHANF
Ga0099794_106107732	3300007265	Vadose Zone Soil	VTIRLACDGPQTVRADTIGAAWLAVAGRILAEGVESRYDGLPVREISLVTLVVDRPGPAD
Ga0105245_113762452	3300009098	Miscanthus Rhizosphere	VTIRLASDGPQTVRADTIGAAWLGVAGRVLAEGVESRYDGLPVREISLVTLVVQHPAPADEIIARHAEPERLAWMHANFTD
Ga0116214_13784682	3300009520	Peatlands Soil	VTIRLASDGPQTLHTDTIGAAWLAVAGRILARGAASRYDGLPVREISLVTLAVDRPDPADEIIACHAEPGRLAWM
Ga0116222_11540931	3300009521	Peatlands Soil	VTIRLASDGPQTLHTDTIGAAWLAVAGRILARGAASRYDGLPVPEISLVTLAVDRPDPADEIIA
Ga0116221_10902922	3300009523	Peatlands Soil	VTIRLAEDGPQTVRADTIGAAWLAVAGRILADGTASAYDGRPVREISHVTLAVDHPDPEDEIIARLAEPDRLAWMHANFTNHSAVAALVLAGEARCTRRRSS*
Ga0116225_11711413	3300009524	Peatlands Soil	VTIRLASDGPQTLHADTIGAAWLAVAGLILARGVASRYDGLPVREISLVTLAVDRPDPADEIIARHAEPERLAWMHANFTGHAKMDALGGAD
Ga0116220_105174121	3300009525	Peatlands Soil	VTIRLAEDGPQTVRADTIGAAWLAVAGRILADGTASAYDGRPVREISHVTLAVDHPDPEDEIIARLAEPDRLAWMHANFTNHSAVAALVL
Ga0105249_105155192	3300009553	Switchgrass Rhizosphere	VTIRLASDGPQTVRADTIGAAWLGVAGRVLAEGVESRYDGLPVREISLVTLVVQHPAPAD
Ga0116224_102513202	3300009683	Peatlands Soil	VTIRLASDGPQALHADTIGAAWLAVAGRILAQGVASRYDGLPVREISLVTLAVDRPDPADEIIASRAEPGRLAWMHANFTEHAKVA
Ga0116216_106896912	3300009698	Peatlands Soil	VTIRLASDGPQTLHTDTIGAAWLAVAGRILARGAASRYDGLPVREISLVTLAVDRPDPVDEIIARHAEPERLAWMHANFTD
Ga0116223_101684771	3300009839	Peatlands Soil	VTIRLAEDGPQTVRADTIGAAWLAVAGRILAGGTASAYDGRPVREISHVTLAVDHPDPEDEIIARLAEPDRLAWMHANFTNHSAVAALVLAGEARCTRRRSS
Ga0126380_105155961	3300010043	Tropical Forest Soil	MNAAPYDAGVTIRLASDGPRTVRADTIGAAWLGVAGRILAEGVESRYDDLPVREISLVTLVVDHPGPADEII
Ga0126373_105879434	3300010048	Tropical Forest Soil	MTTRLADGNPQTLHAATIGAAWLAVARRIIADGISSRYDDLPVREISLVTLAIDGPDPGDEVIARY
Ga0126378_107061811	3300010361	Tropical Forest Soil	MTTPLADSNPQTLHAATIGAAWLAAAGRIIAYGIATRYDDLPVREISLVTLAIDAPDPGDEVIASCGDPGRLAWMHA
Ga0134125_124631842	3300010371	Terrestrial Soil	VTIRLASDGPQTVQADTIGAAWLAAAQRILTEGVESRYEGLPVREISLVTLVVDHPGPADEIIAAHAEPERLAWMHANFTEHAA
Ga0126381_1003381944	3300010376	Tropical Forest Soil	LDEPHILHSDTIGDAWFAVADRIVANGVPSRYNDLAIREISLVTLAVARPDPDDEIIASHAEPERLAWMHA
Ga0136449_1022446662	3300010379	Peatlands Soil	VTIRLAEDGPQAVRADTIGAAWLAVAGRILAGGTASEYDGRPVREISHVTLAVDHPDPEDEIIARLAEPDRLAWMHANFTNHSAVAALVLAGEARCTRRHGR*
Ga0134126_118712983	3300010396	Terrestrial Soil	MTTPLALDEPHILSSDTIGGGWFAAAGRIVAHGVPSRYADLPIREVSLLTLTIARPDPHDEIIAKHAEPERLAWMHANF
Ga0126344_10839932	3300010866	Boreal Forest Soil	VVTIRLAGDGPRILHASTIGEAWLAVARRILAEGVASRYDGREVREISLVTLTVDHPDPADEILTGEESWINGVEK
Ga0126344_13338882	3300010866	Boreal Forest Soil	MTTPPAPGEPEILRADTIGGAWFAVAGRIVADGLPSRYDEQPIREISLVTLAIARPDPDDEIIARHAEPE
Ga0126347_14939171	3300010867	Boreal Forest Soil	VTIRLAGDGPQVVGADTLGAAWLAVAGRILDAGVESRYDGLAVREVSLVTLVVERPDPADEIIARYAEPERLAWMHANFTGHARVSALGGA
Ga0126359_14295632	3300010869	Boreal Forest Soil	MTTPPAPGEPEILRADTIGGAWFAVAGRIVSNGLLSRYDEQPIREISLVTLAITRPDPDDEIIARHA
Ga0126361_106781311	3300010876	Boreal Forest Soil	VTIELASDRPDTLHADTIGAAWLGVARLILADGIASRYDEQPVREVSLVTLVVARPDPADPVIARYAEPERLAWMHAN
Ga0126350_123381933	3300010880	Boreal Forest Soil	VTIRLAEDDPQTVHAATIGAAWLAVAARILADGVASTYDGRPVREVSHVTLCVERPDPD
Ga0137363_101649951	3300012202	Vadose Zone Soil	VTIRLACDGPQTVRADTIGAAWLAVAGRILAEGVESRYDGLPVREISLVTLVVDHPGPADEIIARHADDRQVGARVRDRTRLREG
Ga0137362_105180841	3300012205	Vadose Zone Soil	VTIRLACDGPQTVRADTIGAAWLAVAGRILAEGTESRYDGLPVREISLVTLVVEHPAPDDEIIPIRDRAQLP
Ga0137361_104784183	3300012362	Vadose Zone Soil	VRADTIGAAWLAVAGRILAEGPESRYDGLPVREISLVTLVVDRADPVDEIIASRAEPGRLAWMHAN
Ga0157344_10259982	3300012476	Arabidopsis Rhizosphere	VAIRLASNGPQTVRADTIGAAWLAVAQRILTEGVESRYDGLPVREISLVTLVVDRPGPADEIIAAHAEPERLAWMHANF
Ga0164309_113836442	3300012984	Soil	VVTIRLAADGPQVIQADTLGAAWLAVAGRILAQGVASQYDGLAVSEISLVTLVVERPDPADEIIARHAEPE
Ga0164304_116943541	3300012986	Soil	VTIRLASDGPQTVRADTIGAAWLAVAQRILTEGVESRYDGLPVREISLVTLVVDHPGPADEI
Ga0157374_113436182	3300013296	Miscanthus Rhizosphere	VTRRLASDGPQTVRADTIGAAWLGVAGRVLVEGVESRYDGLPVREISLVTLVVQHPAPADEIIARHAERERLAWMHA
Ga0157372_119424221	3300013307	Corn Rhizosphere	LATRLALDEPYVLCSQPIGESWFAVADRIVASGLPSLYDDLPIREISLITLVIARPDPDDEIIATHADP
Ga0134081_103575982	3300014150	Grasslands Soil	VTIRLASDGPQTVRADTIGAAWLAVAGRILTEGVDSRYDGLLVREISLVTLVVDHPGPEDEIIA
Ga0182030_100468476	3300014838	Bog	VTIELASDRPQTLSAGTIGAAWLTVARRILADGVDSRYDGLPVREISLVTLEVEQPDPHDELIT
Ga0182032_109270582	3300016357	Soil	MHRLRGVTIRLADDDPQALHAATIGAAWLAVARRTLADGTVSRHDGLPVREISHVTLCVERPDPDDKIIARFAEPERLAWMHENFTDRSRVSALG
Ga0187814_100042451	3300017932	Freshwater Sediment	VTRRLAEDGPQTLHAAGIGGAWLAVAGRILTDGIVSAYDGRPVRKISHVTLAVEHPDPEDEIIARLAEPERLARMHANFTDHAAVADLGGADS
Ga0187809_102083721	3300017937	Freshwater Sediment	VTRRLAEDGPQTLHAAGIGGAWLAVAGRILTDGIVSAYDGRPVREISHVTLAVEHPDPEDEIIARL
Ga0187780_100062706	3300017973	Tropical Peatland	VTIRLADDDPQTLHAATIGAAWLAVAKRILADGVASRYDGLPVREISHVTLCVERPDPDDKIIARFAGPERLASSPGCSIMSQARSGGRPGG
Ga0187815_102762421	3300018001	Freshwater Sediment	VLYRYATSRIHAAKVPYHAVVTIRLASDGPQVLHADTIGAAWLAVAGRILAQGVASRYDGLPVREISLVTLAVDRPDPADGIIARHAEPERLAWMHANFTDHAKVDALG
Ga0187815_103924691	3300018001	Freshwater Sediment	VVTVRLASDDPQTVDAATIGAAWLAVAGRIMTDGVASRYDGLPVREISHVTLCVDHPDPDDAIIARLAEPERLAWMHANFTDRSRVL
Ga0187855_102650112	3300018038	Peatland	LTLSVCLNADTLGAAWLAVAGRIVTDGIASCYDGLAVREISLVTLAVETPDPDDELIARYAEPERLAWMHANFTD
Ga0210403_108818931	3300020580	Soil	VTARLARDDPQTLRAATIGAAWLAVAERILADGTASTYDGRPVREISHVTLAVEHPDPADEIIARHAEPERLAWMHANF
Ga0210395_106169762	3300020582	Soil	VHLAADDPQTLRATTIGAAWLAVARRILEAGTPSRYDGLDIREIAHVTLAVDRPDPDDAIIARHAEPERLAWMHANFNDHARVAELGG
Ga0210395_109239203	3300020582	Soil	MVTSTLASELTLATDDPAILHATTLGEAWFAVARRILATGVASRYDDLPIREISLVTLVVAHPDPADPIIARH
Ga0210404_100885211	3300021088	Soil	VITRLASDGPQTVRADTIGAAWLTVAGRILAEGVESCYDGLPVREISLVTLVVDRPGPADEIIARHAEPER
Ga0210406_101367332	3300021168	Soil	LDEPLVLRSGTIGHAWLAVAGRIVANGVTSRYDGLPVREVSLVTLAVTRPDPDDEIIARHAEPERLAWMHANFTDHSRVAA
Ga0210408_100037801	3300021178	Soil	VRWRRRGERNSGSGEGSYYAGVTIRLASDGPQTVRADTIGAAWLAVAGRILAEGVESRYDGLPVREISLVTLVVDRPGPADEIIARHAE
Ga0210396_101452621	3300021180	Soil	VTARLARDDPQTLRAATIGAAWLAVAERILADGTASTYDGRPVREISHVTLAVEHPDPADEIIARHAEPE
Ga0210397_113200682	3300021403	Soil	VTARLARDDPQTLRAATIGAAWLAVAERILADGTASTYDGRPVREISHVTLAVEHPDPADEIIARHAEPERLAWMHANFTGHAAVAE
Ga0210387_118731861	3300021405	Soil	MTTRLAPGEPQILRAGTTGGAWLAVAGRIVADGVPGRYDEQPIREISLVTLVIAQPDPDDEIIARHAEPERLAWMHANFTD
Ga0210386_114843992	3300021406	Soil	MTTRLAPGEPQILRAGTIGGAWLAVAGRIVADGVPGRYDEQPIREISLVTLVIAQPDPDDEIIARHAEPERLAWMHANFT
Ga0210384_109627872	3300021432	Soil	VTIRLASDGPQTLHADTIGAAWLAVAGRILADGIVSRYDGLRVREISLVMLAVDRPDPGDEI
Ga0210390_113105882	3300021474	Soil	VTIRLASDGPQTLHADTIGAAWLAVAGRILADGIVSRYDGLPVREISLVMLAVDRPDPGDEIIASHAEPERLAWMHANFTDHAKVAALGGA
Ga0210392_105387822	3300021475	Soil	VTIRLASDGPQTVRADTIGAAWLAVAQRILTEGVESRYDGLPVREISLVTLVVDHPGPADEIIAAHAEPERLAWMHAN
Ga0210392_113240712	3300021475	Soil	VTIGRDGDGPQTVRADTIGAAWLAVAGRILAEGVESRYDGLPVREISLVTLVVDRPGPTDEIIARHAEPERLAW
Ga0210398_110808871	3300021477	Soil	VTTPLASDGPQTLRAATIGGAWLAVARRILADGVASRYDERPIREISLVTLVVDRPDPDDEIIARYAEPERLAWMHANF
Ga0210402_107356532	3300021478	Soil	MNEADPRSYDAGVAIRLASDGPQTVQAETIGAAWLAVAGRILAEGVESRYDGLAVREISLVTLVVDRPAPTDEIIARHAEPER
Ga0210409_101321004	3300021559	Soil	VITRLASDGPQTVRADTIGAAWLTVAGRILAEGVESCYDGLPVREISLVTLVVDRPGPADEIIARHAEPERLAWMHAN
Ga0210409_105648241	3300021559	Soil	VTARLARDDPQTLHAATIGAAWLAVAERILADGTASTYDGLPVQEISHVTLAVEHPDPADEIIARHAEPERLAWMHANFTD
Ga0210409_107968831	3300021559	Soil	VTIRLASDGPQTVRADTIGAAWLAVAGRILAEGVESRYDGLPVREISLVTLVVDRPGPADEIIARHA
Ga0210409_113518632	3300021559	Soil	VTARLARDDPQTLRAATIGAAWLAVAERILADGTASTYEGRPVREISHVTLAVEHPDPADEVIARHAE
Ga0210409_113949531	3300021559	Soil	VTIRLASDGPQTVRADTIGTAWLAVAGRILAEGVESRYDGLAVREISLVTLVVEHPGPEDEIIAGH
Ga0213851_13616521	3300021860	Watersheds	VTIRLASDGPQTLHADTIGAAWLAVAGRILAEGIASRYDDLPVREISLVTLAIDRPDPDPKTDEIIAARAEPGQLAWMH
Ga0208356_10970112	3300025504	Arctic Peat Soil	MTTPPAPGEPEILRADTIGGAWFAVAGRIVADGLPSRYDEQPIREISLVTLAIARPDPDDEIIARHAEPERLAWMHANFTDR
Ga0207699_113426352	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSARARRGPYHAGVTIRLASDGPQTVRAGTIGAAWLAVAQRILTEGVESRYDGLPVREISLVTLVVDHPG
Ga0207665_111032852	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VTIRLASDGPQTVQADTIGAAWLAAAQRILTEGVESRYEGLPVREISLVTLVVDHPGPADEIIAAHAEPERL
Ga0207665_112241461	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VTIGRDGDGPQTVRADTIGAAWLAVAGRILAEGVESRYDGLPVREISLVTLVVDRPGPTDEIIARHAEPERLAWMHAN
Ga0207679_111472732	3300025945	Corn Rhizosphere	VTIRLASDGPQTVRADTIGAAWLAAAQRILTEGVESRYEGLPVREISLVTLVVDHPGPADEIIAAHAEPERLAWMHANFTE
Ga0207640_119165591	3300025981	Corn Rhizosphere	VTIRLAGYGPQTVRADTIGAAWLTVAGRILAEGVESRYDGLPVREISLVTLVVQHPAPADEIIARHAERERLAWMHANFTDHARVAALGD
Ga0207702_103343343	3300026078	Corn Rhizosphere	VVTIRLAADGPQVIQADTLGAAWLAVAGRILAKGVASRYDGLVVSEISLVTLVVERPDPADEIIARHAE
Ga0207676_102504622	3300026095	Switchgrass Rhizosphere	VTIRLASDGPQTVRADTIGAAWLAVAQRILTEGVESRYDGLPVREISLVTLVVDHPGPADEIIAAHAEPERLAWMHANFTE
Ga0257150_10222451	3300026356	Soil	VTLPLAGDDPQTLHAATIGQVWLAVAGRILADGVASAYDGLPVREISHLTLCVEHPDPADEI
Ga0257155_10293562	3300026481	Soil	VTLPLAGDDPQTLHAATIGQVWLAVAGRILADGVASAYDGLPVREISHLTLCVEHPDPADEIIAR
Ga0209326_10010531	3300026899	Forest Soil	VTIRLASDGPQTARADTIGAAWLAVAQRILTEGVESRYDGLPVREISLVTFVVDHPGPADEIIARH
Ga0209178_10562363	3300027725	Agricultural Soil	VVTIRLAADGPQVIQADTLGAAWLAVAGRILAKGVASRYDGLAVTEISLVTLVVERPDPADEIIARHAEPERLAW
Ga0209580_101340113	3300027842	Surface Soil	VTTPLAGDEPSILAAPTIGAAWLGVAGRILVEGIETRYDGLPVREISLVTLAVSRPDPDDEIIARHAEPERLAWMHANFTDR
Ga0209169_105531691	3300027879	Soil	MTRTVHAPTIGAGWLAVARLILAEGIASRYDGLPVREVSLVTLTVGRPDPADEIIARHADQERLAW
Ga0209415_100448746	3300027905	Peatlands Soil	VTIRLAEDGPQTVRADTIGAAWLAVAGRILAGGTASAYDGRPVREISHVTLAVDHPDPEDEIIARLAEPDRLAWMHANFTNHSAVAALVLAGEARCTRRHGR
Ga0268264_104939441	3300028381	Switchgrass Rhizosphere	VTIRLASDGPQTVRADTIGAAWLAVAGRILAEGVESRYDGLPVREISLVTLVVEHPAPADEIIA
Ga0307317_100889512	3300028720	Soil	VTIRLASDGPQTLRADTIGAAWLAVAGRILAEGVESRYEGLPVREISLVTLVVEHPAPEDEIIAGHAEPERLAWMHANFTDHAR
Ga0307305_101348242	3300028807	Soil	VTIRLASDGPQTVRADTIGAAWLAVAGRILAEGVESRYEGLPVREISLVTLVVAQPAAADEIIARHAQPERLAWMHANFTE
Ga0308309_108061112	3300028906	Soil	VTVGLARDDPQTLYAATIGQAWLAVAERILADGTASAYDGLPVREISHVTLCVERPDPDDEIIAELADPERLAGM
Ga0308309_112188802	3300028906	Soil	MTPLARDEPAVLAAEGLGAAWLMIARRILDEGVDSRYDDRPVREISLVTLLVEDPDPEDGIIARYAEPDRLALTR
Ga0311368_107422032	3300029882	Palsa	MDAAYDAGVTTELARDRPVILYAETAGAAWLAVAGRILAGGVASRYDGLAVREISLVTLVIEAPDPD
Ga0311369_101454001	3300029910	Palsa	MIELALGRPEVLYVDTLGAAWLAVARRILASGIASRYDGLAVREISLVTLAVEAPDPDDELIARYAEPERLAWMHANFTDQAQVAAL
Ga0311369_114299642	3300029910	Palsa	VTIELARDRPEVLYADTLGAAWLAIAGRILADGIASRYEGLPVREISLVTLAVEAPDPDDELIA
Ga0311355_102874471	3300030580	Palsa	VVTIRLASDRPQILAAGSIGAAWLAVARRILAEGIASRYDGLAVREISLVTLAVDQADPADEI
Ga0316363_103588551	3300030659	Peatlands Soil	VTIRLAEDGPQTVRADTIGAAWLAVAGRILAGGTASAYDGRPVREISHVTLAVDHPDPEDEIIARLAEPDRLAWMHANFTNHSAVAALVL
Ga0310038_100666515	3300030707	Peatlands Soil	VTIRLASDGPQTLHADTIGAAWLAVAGLILARGVASRYDGLPVREISLVTLAVDRPDPADEIIARHAEPERLAWMH
Ga0302308_108489352	3300031027	Palsa	VVTIRLASDRPQILAAGSIGAAWLAVARRILAEGIASRYDGLAVREISLVTLAVDQADPADEIIARHAGPERLAWM
Ga0307501_101830551	3300031152	Soil	VTIRLASDGPQTVRADTIGAAWLAVAGRILAEGVESRYDGLPVREISLVTLVVAHPAAADEIIARHAQ
Ga0318572_100262981	3300031681	Soil	MHRLRGVTIRLADDDPQALHAATIGAAWLAVARRTLADGTVSRYDGLPVREISHVTLCVERPDPDDKIIARFAEPERLAWMHANF
Ga0310686_1061956092	3300031708	Soil	VAGGGAYYAGVGIELAGDWPHTLREASIGGAWLAVARRILADGIASRYDDRAVREISLVTLAVDKPDPDDE
Ga0310686_1156401361	3300031708	Soil	VTVLLAGDDPQTLHAATIGQAWLAVAGRILADGVASAYDGLPVREISHVTLAVEHPDPADEIIARHAEPERLAWMHAN
Ga0307476_108709972	3300031715	Hardwood Forest Soil	VRADTIGTAWLAVAGRILAEGVESRYDGLPVREISLVTLVVEHPAPADEIIARHAEPERLAWMHANFTDHARVAAL
Ga0307474_100276316	3300031718	Hardwood Forest Soil	MTIRLAEDDPQTLHAASIGAAWLTVAERILADGAASTYDGRPVREISHVTLAVEHPDPA
Ga0318502_109514972	3300031747	Soil	MTIRLACDDPQTLHTETIGAAWLAVAGRILADGVASRYDGLPVREISHVTLCVEHPDSDDRI
Ga0318527_102729762	3300031859	Soil	MHSAEPQILHAATIGAAWLGVARRILADGILSRYDDLPVREISLVTLAIDGPDPGDEVIARYGEPGRLAWMHANFSSRSPVAA
Ga0318536_100819312	3300031893	Soil	MHRLRGVTIRLADDDPQALHAATIGAAWLAVARRTLADGTVSRYDGLPVREISHVTLCVERPDPDDKIIA
Ga0310912_111880072	3300031941	Soil	MHRLRGVTIRLADDDPQALHAATIGAAWLAVARRTLADGTVSRYDGLPVREISHVTLCVERPDPDDKIIAR
Ga0308173_117844471	3300032074	Soil	VTIRLAADGPQLIQADTLGAAWLAVGGRILGHGVASRYDGLAVSEVSLVTLVVDHPDPADEIIARHA
Ga0311301_113711061	3300032160	Peatlands Soil	VTIRLASDGPQTLHTDTIGAAWLAVAGRILGQGAASRYDGLPVREISLVTLAVDRPDPADKIIARHAEPERLAWMHANF
Ga0311301_115992192	3300032160	Peatlands Soil	VTIRLAEDGPQTVRADTIGAAWLAVAGRILADGTASAYDGRPVREISHVTLAVDHPDPEDEIIARLAEPDRLAWMHANFTNHSAVAALVLAGEARCTRRHGR
Ga0307470_103217852	3300032174	Hardwood Forest Soil	VVTIRLASDGPQTVRADTIGAAWLAVAGRILAEGVESRYDGLPVREISLVTLVVEHPAPADE
Ga0335080_110714921	3300032828	Soil	VAIRLASDGPQTVRADTIGTAWLAVAGRILTEGLETRYDGLPVREISLVTLVVDHPGPADETIAAHAEPERLAWMHAN
Ga0335081_114783731	3300032892	Soil	VTTRLALDEPHILRSDTIGDAWVAVAGRIVAAGVPSRYDDLPIREISLVTLAVARPDPDDELIARHAEPEQLAWMHANFTDHS
Ga0335074_103687251	3300032895	Soil	VTPPPASDGPQTLRAATIGGAWLAVARRILADGVASRYDERPVREISLVTLVVDRLDPDDEIIVRYAEPER
Ga0335074_105051562	3300032895	Soil	MTTRLTSGDPRILRAETIGDAWLAVAGRIVDDGVPSRYDDLPIREISLVTLAVARPDPDDEIIAHHADPERDRTGLHQERAVMTSS
Ga0370492_0156227_3_194	3300034282	Untreated Peat Soil	MLSSRGPEILRSDTIGDAWLDAAERIMSVGVPGRYDDLPIREIALITLAVQRPDPEDEIIARHA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059190

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences