Metagenome / Metatranscriptome Family F059197

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059197
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	67 residues
Representative Sequence	MARNEVMEPTTEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR
Number of Associated Samples	101
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.47 %
% of genes near scaffold ends (potentially truncated)	20.15 %
% of genes from short scaffolds (< 2000 bps)	87.31 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.045 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.881 % of family members)
Environment Ontology (ENVO)	Unclassified (31.343 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.194 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.21% β-sheet: 0.00% Coil/Unstructured: 59.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF04542	Sigma70_r2	25.37
PF08281	Sigma70_r4_2	20.90
PF01850	PIN	3.73
PF08327	AHSA1	2.24
PF02566	OsmC	1.49
PF12840	HTH_20	1.49
PF00782	DSPc	1.49
PF01882	DUF58	0.75
PF04993	TfoX_N	0.75
PF07728	AAA_5	0.75
PF05016	ParE_toxin	0.75
PF13646	HEAT_2	0.75
PF00230	MIP	0.75
PF03992	ABM	0.75
PF01565	FAD_binding_4	0.75
PF08487	VIT	0.75
PF00473	CRF	0.75
PF07676	PD40	0.75
PF10387	DUF2442	0.75
PF14117	DUF4287	0.75
PF13487	HD_5	0.75
PF13245	AAA_19	0.75
PF13732	DUF4162	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	25.37
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	25.37
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	25.37
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	25.37
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.49
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.49
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.75
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	0.75
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.28 %
Unclassified	root	N/A	6.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.04 %
Unclassified	root	N/A	6.72 %
Viruses	superkingdom	All Organisms → Viruses	2.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.04 %
Unclassified	root	N/A	6.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.24 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	76.12 %
Unclassified	root	N/A	6.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.75 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	73.88 %
Unclassified	root	N/A	6.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.24 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	59.70 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	9.70 %
Unclassified	root	N/A	6.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.24 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.75 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	48.51 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	9.70 %
Unclassified	root	N/A	6.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.24 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.49 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.75 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.75 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.75 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	48.51 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	9.70 %
Unclassified	root	N/A	6.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.24 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.49 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.75 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.75 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.75 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	48.51 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	9.70 %
Unclassified	root	N/A	6.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.24 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.49 %
unclassified Caulobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter	0.75 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.75 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.75 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	48.51 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	9.70 %
Unclassified	root	N/A	6.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.24 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.49 %
Caulobacter sp. JGI 0001010-J14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. JGI 0001010-J14	0.75 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.75 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.75 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101387128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300000858\|JGI10213J12805_10461425	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300000953\|JGI11615J12901_11134788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300000956\|JGI10216J12902_100303599	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300000956\|JGI10216J12902_101510875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	835	Open in IMG/M
3300000956\|JGI10216J12902_113359737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	922	Open in IMG/M
3300004114\|Ga0062593_101162062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	807	Open in IMG/M
3300004479\|Ga0062595_101859247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300005093\|Ga0062594_101534481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300005093\|Ga0062594_102086718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300005171\|Ga0066677_10141154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1312	Open in IMG/M
3300005171\|Ga0066677_10469252	Not Available	722	Open in IMG/M
3300005172\|Ga0066683_10046173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2559	Open in IMG/M
3300005174\|Ga0066680_10063887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2191	Open in IMG/M
3300005177\|Ga0066690_10124804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1674	Open in IMG/M
3300005181\|Ga0066678_10196456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1286	Open in IMG/M
3300005181\|Ga0066678_11067241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. JGI 0001010-J14	521	Open in IMG/M
3300005332\|Ga0066388_100001440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13382	Open in IMG/M
3300005332\|Ga0066388_100157694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2856	Open in IMG/M
3300005332\|Ga0066388_100579465	All Organisms → cellular organisms → Bacteria	1748	Open in IMG/M
3300005332\|Ga0066388_107261426	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005367\|Ga0070667_102364234	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005406\|Ga0070703_10000227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	27095	Open in IMG/M
3300005406\|Ga0070703_10010453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2617	Open in IMG/M
3300005438\|Ga0070701_11392112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300005445\|Ga0070708_100081030	All Organisms → cellular organisms → Bacteria	2938	Open in IMG/M
3300005445\|Ga0070708_100433730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1239	Open in IMG/M
3300005445\|Ga0070708_101589159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300005447\|Ga0066689_10192787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1234	Open in IMG/M
3300005468\|Ga0070707_100623853	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1040	Open in IMG/M
3300005536\|Ga0070697_100347394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1281	Open in IMG/M
3300005540\|Ga0066697_10434051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300005546\|Ga0070696_100136603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1788	Open in IMG/M
3300005546\|Ga0070696_101363256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300005549\|Ga0070704_100517131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1038	Open in IMG/M
3300005558\|Ga0066698_10274427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1167	Open in IMG/M
3300005558\|Ga0066698_10614225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300005559\|Ga0066700_10125930	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300005560\|Ga0066670_10322228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	941	Open in IMG/M
3300005561\|Ga0066699_10917894	Not Available	610	Open in IMG/M
3300005568\|Ga0066703_10873930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	513	Open in IMG/M
3300005569\|Ga0066705_10158528	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300005569\|Ga0066705_10200775	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300005576\|Ga0066708_10658907	Not Available	666	Open in IMG/M
3300005576\|Ga0066708_10724591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	628	Open in IMG/M
3300005586\|Ga0066691_10178429	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300005598\|Ga0066706_10054666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2719	Open in IMG/M
3300005598\|Ga0066706_10566508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	902	Open in IMG/M
3300005719\|Ga0068861_102654469	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005764\|Ga0066903_100534949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2002	Open in IMG/M
3300005764\|Ga0066903_101249804	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300005764\|Ga0066903_101624294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1227	Open in IMG/M
3300005764\|Ga0066903_104898439	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005844\|Ga0068862_102495705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	529	Open in IMG/M
3300005985\|Ga0081539_10060515	All Organisms → cellular organisms → Bacteria	2079	Open in IMG/M
3300006031\|Ga0066651_10197503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1064	Open in IMG/M
3300006046\|Ga0066652_100014075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5271	Open in IMG/M
3300006175\|Ga0070712_101316339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300006575\|Ga0074053_11787290	Not Available	551	Open in IMG/M
3300006791\|Ga0066653_10201737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1007	Open in IMG/M
3300006852\|Ga0075433_10000520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25128	Open in IMG/M
3300006854\|Ga0075425_100895405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1015	Open in IMG/M
3300009012\|Ga0066710_101328864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1115	Open in IMG/M
3300009012\|Ga0066710_102724279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300009012\|Ga0066710_103059144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	649	Open in IMG/M
3300009012\|Ga0066710_104255854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300009098\|Ga0105245_11434181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300009137\|Ga0066709_103769908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300009162\|Ga0075423_12191145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300009162\|Ga0075423_13104082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	509	Open in IMG/M
3300009176\|Ga0105242_10213432	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300010320\|Ga0134109_10234722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300010329\|Ga0134111_10268931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300010375\|Ga0105239_13410953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	517	Open in IMG/M
3300010403\|Ga0134123_10849526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	913	Open in IMG/M
3300012198\|Ga0137364_10549264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	869	Open in IMG/M
3300012199\|Ga0137383_10507316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	883	Open in IMG/M
3300012200\|Ga0137382_10225602	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1293	Open in IMG/M
3300012206\|Ga0137380_10545787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1018	Open in IMG/M
3300012208\|Ga0137376_10129775	All Organisms → Viruses → Predicted Viral	2157	Open in IMG/M
3300012208\|Ga0137376_11158557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300012208\|Ga0137376_11230171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	638	Open in IMG/M
3300012208\|Ga0137376_11715622	Not Available	519	Open in IMG/M
3300012209\|Ga0137379_10411532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1261	Open in IMG/M
3300012211\|Ga0137377_10277653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1608	Open in IMG/M
3300012211\|Ga0137377_10727145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	927	Open in IMG/M
3300012211\|Ga0137377_11703741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300012351\|Ga0137386_10239869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1303	Open in IMG/M
3300012356\|Ga0137371_11241780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300012958\|Ga0164299_10607229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300012960\|Ga0164301_10175935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1338	Open in IMG/M
3300012960\|Ga0164301_10454433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	912	Open in IMG/M
3300012961\|Ga0164302_11481940	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	558	Open in IMG/M
3300012976\|Ga0134076_10110616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1098	Open in IMG/M
3300012977\|Ga0134087_10310516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300012977\|Ga0134087_10613425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300012985\|Ga0164308_10477651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1038	Open in IMG/M
3300012988\|Ga0164306_11711322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300013297\|Ga0157378_10042715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4024	Open in IMG/M
3300013297\|Ga0157378_12501235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300013306\|Ga0163162_11191947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	864	Open in IMG/M
3300015359\|Ga0134085_10427741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	597	Open in IMG/M
3300015373\|Ga0132257_104124562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	528	Open in IMG/M
3300017657\|Ga0134074_1208472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	695	Open in IMG/M
3300018028\|Ga0184608_10527437	Not Available	504	Open in IMG/M
3300018061\|Ga0184619_10055163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1735	Open in IMG/M
3300018071\|Ga0184618_10198562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
3300018431\|Ga0066655_10186796	Not Available	1268	Open in IMG/M
3300018431\|Ga0066655_10979853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	583	Open in IMG/M
3300018433\|Ga0066667_11884430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300018469\|Ga0190270_10282252	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300018482\|Ga0066669_11939755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300021344\|Ga0193719_10374051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300022756\|Ga0222622_10829627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300025885\|Ga0207653_10000314	All Organisms → cellular organisms → Bacteria	27091	Open in IMG/M
3300025931\|Ga0207644_11683089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	532	Open in IMG/M
3300025935\|Ga0207709_10758064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	781	Open in IMG/M
3300026329\|Ga0209375_1252047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	591	Open in IMG/M
3300027748\|Ga0209689_1242187	Not Available	750	Open in IMG/M
3300028708\|Ga0307295_10015732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1821	Open in IMG/M
3300028711\|Ga0307293_10160343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300028715\|Ga0307313_10062664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1103	Open in IMG/M
3300028755\|Ga0307316_10086029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1086	Open in IMG/M
3300028771\|Ga0307320_10353230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	587	Open in IMG/M
3300028793\|Ga0307299_10054681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1471	Open in IMG/M
3300028807\|Ga0307305_10147386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1086	Open in IMG/M
3300028807\|Ga0307305_10517505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300028824\|Ga0307310_10115404	All Organisms → Viruses → Predicted Viral	1209	Open in IMG/M
3300028828\|Ga0307312_10202466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1275	Open in IMG/M
3300028881\|Ga0307277_10041036	All Organisms → Viruses → Predicted Viral	1867	Open in IMG/M
3300028884\|Ga0307308_10248148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	853	Open in IMG/M
3300031226\|Ga0307497_10028686	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1795	Open in IMG/M
3300033433\|Ga0326726_10155362	All Organisms → cellular organisms → Bacteria	2089	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.31%
Host-Associated	Host-Associated	12.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.33%
Plants	Host-Associated → Plants	12.69%
Aquatic	Environmental → Aquatic	2.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.73%
Sediment	Environmental → Aquatic → Sediment	2.99%
Peat	Environmental → Terrestrial → Peat	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.42%
Loam	Environmental → Terrestrial → Soil → Loam	17.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.99%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.49%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.99%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.49%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.99%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.24%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.49%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1013871281	3300000364	Soil	MATNEVIESATEERGWVGPEFPSLGRIALGTLLFATGGMLLLTIIGTPLGIVLLPVGVGMLTTPKERDR*
JGI10213J12805_104614252	3300000858	Soil	MARNEDGWVGPEFPSLGAIVLGGILFATGGMLLLTVIGTPLGIVLFAVGIGLLTTPKERRR*
JGI11615J12901_111347881	3300000953	Soil	MARNEVIEPATEDRDWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
JGI10216J12902_1003035993	3300000956	Soil	MATNEVIGTTDHANEWVGPELPSLGRIALGTLLFATGGMLLLTIIGTPLGIVLLPVGVGMLTTPKERGR*
JGI10216J12902_1015108752	3300000956	Soil	MATHEVIEHTTEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVLLPVGVGMLTTPKERSR*
JGI10216J12902_1133597373	3300000956	Soil	MARNEVIEPATEDGGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0062593_1011620622	3300004114	Soil	MARNEVMEPTTEDRSWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0062595_1018592471	3300004479	Soil	MARDEVIEPTAEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0062594_1015344813	3300005093	Soil	MPRNEAIEPTTEDRGWVGPEFPSLGRIALGAFLFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0062594_1020867182	3300005093	Soil	MARNEIMDRATEDQGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0066674_105272961	3300005166	Soil	MAPNEDGWVGPEFPSLGRIALGTFLFATGGMLLLTIIGTPLGIVMLP
Ga0066677_101411544	3300005171	Soil	MARNEVMEPTAEDREWAGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0066677_104692521	3300005171	Soil	MAWNEFLEPEAEDQGWVGPEFPSLGRIALGTMLFATGGMLLLTVIGTPLGIVMLPVGVGLLTTPKERGR*
Ga0066683_100461736	3300005172	Soil	MAPNEDGWVGPEFPSLGRIALGTFLFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERGR*
Ga0066680_100638872	3300005174	Soil	MAQNEEGWVGPEFPSLGSIALGTILFATGGMLLLTVIGTPLGIVLLPLGVGLLTTPKERR
Ga0066690_101248043	3300005177	Soil	MARNEVMEPTAEDREWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0066678_101964564	3300005181	Soil	TEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0066678_110672411	3300005181	Soil	MPRNEAAEPEAKDQGWVGPEFPSLGQIALGTILFATGGMLLLTVIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0066388_10000144012	3300005332	Tropical Forest Soil	MTTETDTEKQGWVGPEFPSLGSIALGTILFATGGMLLLTVIGTPLGIVLLPVGVGLLTTPKERGR*
Ga0066388_1001576942	3300005332	Tropical Forest Soil	MATNEVIGTTEATKDWVGPELPSLGRIALGTLLFATGGMLLLTIIGTPLGIVLLPVGVGMLTTPKERSR*
Ga0066388_1005794654	3300005332	Tropical Forest Soil	MATNKVIESTTEDRGWVGPEFPSLGRIALGTLLFATGGMLLLTIIGTPLGIVLLPVGVGMLTTPKERGR*
Ga0066388_1072614262	3300005332	Tropical Forest Soil	ATNEVIEETKEDRGWVGPEFPSLGRIALGTLLFATGGMLLLTIIGTPLGIVMLPVGVGMLTTPKERG*
Ga0070667_1023642342	3300005367	Switchgrass Rhizosphere	MARNEVMEPATEDRDWVPEFPSLGRIALGTLLFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0070703_1000022723	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MERNEVMEPTTEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERER*
Ga0070703_100104533	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MATNEVIESTTEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0070701_113921122	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MARNEVMEPATEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGIGMLTKPKERAR*
Ga0070708_1000810302	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MWQRATDERRQVMATNEVIESTTEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0070708_1004337302	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MATNEVMEHTTQDRGWIGPEFPSLGRIALGAFLFATGGMLLLTIIGTPLGIVMLPVGIGMLTTPKERAR*
Ga0070708_1015891592	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVANEVIEVTTEDRGWVGPEFPSLGRIALGAFLFATGGMLLLTIIGTPLGIVMLPVGIGMLTTPKERAR*
Ga0066689_101927871	3300005447	Soil	MAQNEDGWVGPEFPSLGSIALGTILFATGGMLLLTVIGTPLGIVLLPLGVGLLTTPKERR
Ga0070707_1006238532	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MVTNEVIEPTTKDRGWVGPEFPSLGRIALGAFLFATGGMLLLTIIGTPLGIVMLPVGIGMLTTPKERAR*
Ga0070697_1003473941	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MARNEVMEPTTEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPNEREQ*
Ga0066697_104340512	3300005540	Soil	MAPNEDGWVGPEFPSLGRIALGTFLFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERER*
Ga0070696_1001366032	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MARNEVVEPTMEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0070696_1013632561	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MARNEVMEPPTEDREWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0070704_1005171313	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MARNEVMDRATEDQGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0066698_102744272	3300005558	Soil	MAIKEVEATRQDEGWVGPELPSLGRIALGTFLFATGGMLLLTIIGTPLGIVMLPVGIGMLTTPKERDR*
Ga0066698_106142251	3300005558	Soil	MAPNEDGWVGPEFPSLGRIALGTFLFATGGMLLLTIIGTPLGIVMLPVGV
Ga0066700_101259302	3300005559	Soil	MAWNEVLEPEAEDQGWVGPEFPSLGRIALGTILFATGGMLLLTVIGTPLGIVMLPVGVGLLTTPKERGR*
Ga0066670_103222282	3300005560	Soil	MARNEVIEPPTEDRGWVGPEFPSLGSIALGTILFATGGMLLLTIIGTPLGIVLLPVGVGLLTTPKERER*
Ga0066699_109178941	3300005561	Soil	LMARNEVLEPEAEDQGWVGPEFPSLGRIALGTILFATGGMLLLTVIGTPLGIVMLPVGVGLLTTPKERGR*
Ga0066703_108739302	3300005568	Soil	MARNEVMEPTAEDREWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGV
Ga0066705_101585282	3300005569	Soil	MARNEVLEPEAEDQGWVGPEFPSLGRIALGTILFATGGMLLLTVIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0066705_102007755	3300005569	Soil	MSQDEERWVGPEFPSLGSIALGTILFATGGMLLLTIIGTPLGIVLLPVGVGLLTTPKERDR*
Ga0066708_106589071	3300005576	Soil	MARNEVLEPEAEDQGWVGPEFPSLGRIALGTILFATGGMLLLTVIGTPLGIVMLPVGVGLLTTPKERGR*
Ga0066708_107245912	3300005576	Soil	MARNEVIEPPTEDRGWVGPEFPSLGSIALGTILFATGGMLLLTIIGTPLGIVLLPVGVGLLTTPKERDR*
Ga0066691_101784294	3300005586	Soil	MARNEVLEPEAEDQGWVGPEFPSLGRIALGTILFATGGMLLLTVIGTPLGIVLLPLGVGLLTTPKERR*
Ga0066706_100546663	3300005598	Soil	MPRNEVVEPEAEDQGWVGPEFPSLGRIALGTILFATGGMLLLTVIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0066706_105665081	3300005598	Soil	HLMVRNEVIEPTTEDRDWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERER*
Ga0068861_1026544692	3300005719	Switchgrass Rhizosphere	RGWVGPEFPSLGRIALGTLLFATGGMLLLTIIGTPLGIVMLPVGIGMLTTPKERDR*
Ga0066903_1005349493	3300005764	Tropical Forest Soil	METEVRAMDTKPASEDRQWVGPEFPSIGSIALGTLLFATGGMLLFTIIGTPLGIVLFAVGLDMLITPKVRR*
Ga0066903_1012498042	3300005764	Tropical Forest Soil	MARTEDPRPATDDRDWIGPPLPSLGSIALGTILFATGGMLLLTVIGTPLGIVLFAVGLGLLTTPKEARR*
Ga0066903_1016242941	3300005764	Tropical Forest Soil	MATKEAVDATKEDQGKDDRDWMGPEFPSLGRIALGTLLFATGGMLLLTIIGTPLGIV
Ga0066903_1048984392	3300005764	Tropical Forest Soil	MATNEVIEATKEDRGWVGPEFPSLGRIALGTLLFATGGMLLLTIIGTPLGIVLLPVGVGMLTTPKVRSG*
Ga0068862_1024957052	3300005844	Switchgrass Rhizosphere	MARNEVVEPTMEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGV
Ga0081539_100605153	3300005985	Tabebuia Heterophylla Rhizosphere	MADNERAEKPAERPATVGPELPSLGAFILGSILFTTGGMLMLTVIGTPLGILLFAVGLGMLLTPKERRR*
Ga0066651_101975032	3300006031	Soil	MARNEVMETATEDRGWVGPEFPSLGQIALGTFLFATGGMLLLTVIGTPLGIVMLPVGV
Ga0066652_1000140754	3300006046	Soil	MAPNEDGWVGPEFPSLGRIALGTFLFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0070712_1013163391	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MATNEVIESTTEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKE
Ga0074053_117872902	3300006575	Soil	MARNEVMEPTTEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERER*
Ga0066653_102017372	3300006791	Soil	MARNEVMETATEDRGWVGPEFPSLGQIALGTFLFATGGMLLLTVIGTPLGIVMLPVGVGLLTTPKERER*
Ga0075433_1000052024	3300006852	Populus Rhizosphere	MATNEVIGTTDDAKEWVGPELPSLGRIALGTLLFATGGMLLLTIIGTPLGIVLLPVGVGMLTTPKERGR*
Ga0075425_1008954052	3300006854	Populus Rhizosphere	MATDEVIGTTEEDPGWIGPELPSLGRIALGTLLFATGGMLLLTIIGTPLGIVLLPVGVGMLTTPKERGR*
Ga0066710_1013288643	3300009012	Grasslands Soil	MARNEVVEATKEDQGWVGPEFPSLGRIALGTLLFATGGMLLLTIIGTPLGIVLLPLGVGMLTTPKERGR
Ga0066710_1027242792	3300009012	Grasslands Soil	MARNEVMETATEDRGWVGPEFPSLGRIALGTILFATGGMLLFTIIGTPLGLVMLPVGIGMLTTPKERGR
Ga0066710_1030591442	3300009012	Grasslands Soil	MAPNEDGWVGPEFPSLGSIALGTILFATGGMLLLTVIGTPLGIVLLPLGVGLLTTPKDRR
Ga0066710_1042558542	3300009012	Grasslands Soil	MAPNEDGWVGPEFPSLGRIALGTFLFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERD
Ga0105245_114341812	3300009098	Miscanthus Rhizosphere	MPRNEAIEPTTEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0066709_1037699082	3300009137	Grasslands Soil	MARNEVMEPTTEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERGR*
Ga0075423_121911452	3300009162	Populus Rhizosphere	MATNEVIGTTEEDRDWVGPELPSLGRIALGALLFATGGMLLLTIIGTPLGIVLLPVGIGMLTTPKERDR*
Ga0075423_131040822	3300009162	Populus Rhizosphere	MATDEVIGTTEEDRGWIGPELPSLGRIALGTLLFATGGMLLLTIIGTPLGIVLLPVGVGMLTTPKERG
Ga0105242_102134322	3300009176	Miscanthus Rhizosphere	VVQRVIHEEEVRVMARDEVMEPPTEDRGWVGPEFPSPGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0134109_102347222	3300010320	Grasslands Soil	MHEGGAAMATNEVIEATKEDEGWVGPEFPSLGAIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERGR*
Ga0134111_102689313	3300010329	Grasslands Soil	ARNEVMETATEDRGWVGPEFPSLGQIALGTFLFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERGR*
Ga0105239_134109532	3300010375	Corn Rhizosphere	MARNEVMEPATEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0134123_108495261	3300010403	Terrestrial Soil	MERNEVMEPATEDRGWIGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0137364_105492642	3300012198	Vadose Zone Soil	MARNEVMETATEDRGWVGPEFPSLGRIALGTFLFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERER*
Ga0137383_105073161	3300012199	Vadose Zone Soil	MATNEVSEPTTEDPGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0137382_102256024	3300012200	Vadose Zone Soil	MATNEVIEPTTQDRDWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERR*
Ga0137380_105457872	3300012206	Vadose Zone Soil	MEPATEDRGWVGPEFPSLGRIALGTFLFVTGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERD
Ga0137376_101297753	3300012208	Vadose Zone Soil	MTRNEVMEPTTEDRGWMGPEFPSLGSIALGTILFATGGMLLFTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0137376_111585572	3300012208	Vadose Zone Soil	MARNEVMETATEDRGWVGPEFPSLGRIALGTILFATGGMLLLTVIGTPLGIVMLPVGVGLLTTPKERGR*
Ga0137376_112301712	3300012208	Vadose Zone Soil	MAPREDGWVGPEFPSLGRIALGTFLFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0137376_117156222	3300012208	Vadose Zone Soil	MARNEVMEPTTEDRDWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERGR*
Ga0137379_104115323	3300012209	Vadose Zone Soil	MARNEVMEPTTEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0137377_102776532	3300012211	Vadose Zone Soil	MQRVVHEEGGQLMARNEVMETATEDRGWIGPEFPSLGRIALGTLLFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0137377_107271452	3300012211	Vadose Zone Soil	MARNEVMEPTTEDRGWVGPEFPSLGRIALGTILFATGGMLLLTVIGTPLGIVLLPVGVGLLTTPKERDR*
Ga0137377_117037411	3300012211	Vadose Zone Soil	LVLAGSHPPGGGQLMATNEVIEPTTQDRDWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERER*
Ga0137386_102398692	3300012351	Vadose Zone Soil	MARNEVMETATEDRGWVGPEFPSLGRIALGTFLFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0137371_112417801	3300012356	Vadose Zone Soil	TEDRGWVGPEFPSLGQIALGTFLFATGGMLLLTVIGTPLGIVMLPVGVGLLTTPKERER*
Ga0164299_106072291	3300012958	Soil	MARNEVMEPTTEDREWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0164301_101759351	3300012960	Soil	MARNEVMESATEDRDWVGPEFPSLGRIALGTILSATGGMLLLTIIGTPLGIVMLPVGVGLLTTPTERDR*
Ga0164301_104544334	3300012960	Soil	ARNEVMDRATEDQGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0164302_114819401	3300012961	Soil	MARNEVMEPTTEDQGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0134076_101106162	3300012976	Grasslands Soil	MELIEDVQPATEDRGWVGPEFPSLGRIALGTFLFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERGR*
Ga0134087_103105162	3300012977	Grasslands Soil	MARNEVGEPTTGDRGWIGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVLLPLGVGMLTTPKERGR*
Ga0134087_106134253	3300012977	Grasslands Soil	ARNEVLEPEAEDRGWVGPEFPNLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGIGMLTTPKERDR*
Ga0164308_104776512	3300012985	Soil	MAPNEDGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0164306_117113221	3300012988	Soil	RGGGQLMGRNEVMEPTAEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0157378_100427151	3300013297	Miscanthus Rhizosphere	DRGWIGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0157378_125012351	3300013297	Miscanthus Rhizosphere	LMARNEVMDRATEDQGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0163162_111919471	3300013306	Switchgrass Rhizosphere	MARNEVVEPTMEDRGWVGPELPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0134085_104277412	3300015359	Grasslands Soil	MARNEVVEATKEDQGWVGPEFPSLGRIALGTLLFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERGR*
Ga0132257_1041245621	3300015373	Arabidopsis Rhizosphere	MARNEVMEPAAEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR*
Ga0134074_12084722	3300017657	Grasslands Soil	MAPNEDGWVGPEFPSLGRIALGTFLFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKE
Ga0184608_105274372	3300018028	Groundwater Sediment	MARNEVIEPTTEDRDWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR
Ga0184619_100551633	3300018061	Groundwater Sediment	MERNEVIEPATEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR
Ga0184618_101985621	3300018071	Groundwater Sediment	MARNEVMEPTTEDRGWIGPEFPSLGRIALGTLLFATGGMLMLTIIGTPLGIVMLPAGVGLLTTPKERER
Ga0066655_101867962	3300018431	Grasslands Soil	MAPNEDGWVGPEFPSLGRIALGTFLFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERG
Ga0066655_109798531	3300018431	Grasslands Soil	MAINEVEATRQDEGWVGPELPSLGRIALGTFLFATGGMLLLTIIGTPLGIVMLPVGIGMLTTPKERGR
Ga0066667_118844301	3300018433	Grasslands Soil	MARNEVMEPATEDRDWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVLLPVGVGLLTTPKERER
Ga0190270_102822523	3300018469	Soil	MAPNEDGWIGPEFPSLGSIVLWSILLTTGGMLLFTVIGTPLGLVLFMVGIGLLTTPKERR
Ga0066669_119397551	3300018482	Grasslands Soil	GNEVVSTATDGQGWIGPELPSLGRIALGTLLFATGGMLLLTVIGTPLGIVLLPVGVGMLTTPRERR
Ga0193719_103740512	3300021344	Soil	RNEVIEPTTEDRDWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDS
Ga0222622_108296272	3300022756	Groundwater Sediment	VARNEVIEPTTEDRDWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVLLPVGVGLLTTPKERDR
Ga0207653_100003142	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MERNEVMEPTTEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERER
Ga0207644_116830892	3300025931	Switchgrass Rhizosphere	MARNEVIEPTTEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR
Ga0207709_107580642	3300025935	Miscanthus Rhizosphere	MARNEVMDRATEDQGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR
Ga0209375_12520471	3300026329	Soil	MAPNEDGWVGPEFPSLGRIALGTFLFATGGMLLLTVIGTPLGIVMLPVGVGLLTTPKARR
Ga0209689_12421871	3300027748	Soil	MAWNEVLEPEAEDQGWVGPEFPSLGRIALGTILFATGGMLLLTVIGTPLGIVMLPVGVGLLTTPKERGR
Ga0307295_100157323	3300028708	Soil	VARNEVIEPTTEDRDWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGL
Ga0307293_101603432	3300028711	Soil	MAPNEVMEPTTEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDS
Ga0307313_100626642	3300028715	Soil	MARNKVMESPTEDRRWVGPEFPSLARIALGTILFATGGMLLLTIIGTPLGIAMLPVGVGLLTTPKERDR
Ga0307316_100860292	3300028755	Soil	VARNEVIEPTTEDRDWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDS
Ga0307320_103532302	3300028771	Soil	MARDEVVEPTKEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPGGVGLLTTPKER
Ga0307299_100546811	3300028793	Soil	ATKEVIEPATEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR
Ga0307305_101473862	3300028807	Soil	MARNEVIEPTTEDRDWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGMLTTPKERDR
Ga0307305_105175051	3300028807	Soil	MERNEVIEPTTEDREWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERGR
Ga0307310_101154043	3300028824	Soil	MARNKVMESPTEDRRWVGPEFPSLARIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDS
Ga0307312_102024662	3300028828	Soil	MTRNEVMEPATEDRGWVGPEFPSLARIALGTILFATGGMLLLTIIGTPLGIAMLPVGVGLLTTPKERDR
Ga0307277_100410363	3300028881	Soil	MARNEVIEPTTEDRDWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDS
Ga0307308_102481481	3300028884	Soil	QLMARNEVMEPATEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDS
Ga0307497_100286861	3300031226	Soil	MVRNEVMEPTTEDRGWVGPEFPSLGRIALGTILFATGGMLLLTIIGTPLGIVMLPVGVGLLTTPKERDR
Ga0326726_101553621	3300033433	Peat Soil	MTRTEDRGWVGPELPSLRAIVMGTLLFMTGGMLMFTIIGTPLGIVLFAIGLDLLLTPKERRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059197

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences