Metagenome / Metatranscriptome Family F059218

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F059218
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	50 residues
Representative Sequence	MTPKSKTSNGGSRAAVAETTNASNPERERVFNAYRQWGYLEGDLDPLGFL
Number of Associated Samples	114
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	20.90 %
% of genes near scaffold ends (potentially truncated)	98.51 %
% of genes from short scaffolds (< 2000 bps)	88.81 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (82.836 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.687 % of family members)
Environment Ontology (ENVO)	Unclassified (26.119 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.478 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.38% β-sheet: 0.00% Coil/Unstructured: 84.62%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF04185	Phosphoesterase	37.31
PF00491	Arginase	13.43
PF07731	Cu-oxidase_2	11.94
PF16576	HlyD_D23	3.73
PF00486	Trans_reg_C	2.24
PF03625	DUF302	1.49
PF14520	HHH_5	0.75
PF13671	AAA_33	0.75
PF02683	DsbD	0.75
PF13787	HXXEE	0.75
PF02656	DUF202	0.75
PF01979	Amidohydro_1	0.75
PF12867	DinB_2	0.75
PF13407	Peripla_BP_4	0.75
PF00155	Aminotran_1_2	0.75
PF00082	Peptidase_S8	0.75
PF06026	Rib_5-P_isom_A	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	37.31
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	13.43
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	11.94
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	1.49
COG0120	Ribose 5-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.75
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.84 %
Unclassified	root	N/A	17.16 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.84 %
Unclassified	root	N/A	17.16 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.84 %
Unclassified	root	N/A	17.16 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	30.60 %
Unclassified	root	N/A	17.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.73 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.16 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14.18 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.24 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.16 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	14.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.49 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.75 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.16 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.49 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.75 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.69 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	5.22 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.49 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.49 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.75 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.69 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	5.22 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.49 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.49 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.75 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.69 %
Acidobacterium sp. S8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	5.22 %
Bradyrhizobium sp. 2S1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2S1	1.49 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.49 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.75 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.75 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12170362	Not Available	565	Open in IMG/M
3300001546\|JGI12659J15293_10097839	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300001593\|JGI12635J15846_10043667	All Organisms → cellular organisms → Bacteria	3471	Open in IMG/M
3300002245\|JGIcombinedJ26739_100392353	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300002245\|JGIcombinedJ26739_101500130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300003219\|JGI26341J46601_10156258	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300004080\|Ga0062385_10573615	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	709	Open in IMG/M
3300004082\|Ga0062384_101128720	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	567	Open in IMG/M
3300004091\|Ga0062387_100440030	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	892	Open in IMG/M
3300004092\|Ga0062389_101270253	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	922	Open in IMG/M
3300004152\|Ga0062386_101642798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	536	Open in IMG/M
3300005177\|Ga0066690_10784291	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005435\|Ga0070714_100756104	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300005435\|Ga0070714_101660777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300005542\|Ga0070732_10489231	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005602\|Ga0070762_10629276	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300005610\|Ga0070763_10765367	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005614\|Ga0068856_102603864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300005921\|Ga0070766_10479686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	824	Open in IMG/M
3300005921\|Ga0070766_10830627	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300005994\|Ga0066789_10133643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1057	Open in IMG/M
3300006028\|Ga0070717_10385528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1257	Open in IMG/M
3300006028\|Ga0070717_11941296	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300006052\|Ga0075029_100083169	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1898	Open in IMG/M
3300006086\|Ga0075019_10011648	All Organisms → cellular organisms → Bacteria	4919	Open in IMG/M
3300006102\|Ga0075015_100160267	Not Available	1176	Open in IMG/M
3300006162\|Ga0075030_100055785	All Organisms → cellular organisms → Bacteria	3290	Open in IMG/M
3300006175\|Ga0070712_100476088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1043	Open in IMG/M
3300006176\|Ga0070765_101937395	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300006797\|Ga0066659_11707741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300009088\|Ga0099830_10110223	All Organisms → cellular organisms → Bacteria	2068	Open in IMG/M
3300009088\|Ga0099830_10424518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300009090\|Ga0099827_11190289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300009624\|Ga0116105_1061316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	882	Open in IMG/M
3300009638\|Ga0116113_1059070	All Organisms → cellular organisms → Bacteria → Proteobacteria	893	Open in IMG/M
3300009639\|Ga0116122_1291650	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300009665\|Ga0116135_1472193	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300010048\|Ga0126373_11155283	Not Available	840	Open in IMG/M
3300010359\|Ga0126376_12670870	Not Available	548	Open in IMG/M
3300010360\|Ga0126372_10391583	Not Available	1264	Open in IMG/M
3300010398\|Ga0126383_12242372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300011269\|Ga0137392_10045276	All Organisms → cellular organisms → Bacteria → Acidobacteria	3283	Open in IMG/M
3300012203\|Ga0137399_10335550	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300012203\|Ga0137399_11230897	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300012207\|Ga0137381_10737099	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300012353\|Ga0137367_10601342	Not Available	770	Open in IMG/M
3300012683\|Ga0137398_10944302	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300012927\|Ga0137416_11643074	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	585	Open in IMG/M
3300012929\|Ga0137404_11614663	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300012958\|Ga0164299_10804786	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	671	Open in IMG/M
3300013296\|Ga0157374_12103838	Not Available	591	Open in IMG/M
3300014495\|Ga0182015_10900267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300017822\|Ga0187802_10423303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300017930\|Ga0187825_10262041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300017933\|Ga0187801_10209292	Not Available	774	Open in IMG/M
3300017934\|Ga0187803_10448724	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300017972\|Ga0187781_10582346	Not Available	806	Open in IMG/M
3300017972\|Ga0187781_10901610	Not Available	644	Open in IMG/M
3300017975\|Ga0187782_10323015	Not Available	1166	Open in IMG/M
3300017995\|Ga0187816_10472700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300018007\|Ga0187805_10252862	Not Available	808	Open in IMG/M
3300018057\|Ga0187858_10717737	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300018085\|Ga0187772_10062963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2312	Open in IMG/M
3300018086\|Ga0187769_10197143	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300020581\|Ga0210399_11006767	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300020581\|Ga0210399_11107114	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300020583\|Ga0210401_10103372	Not Available	2676	Open in IMG/M
3300021170\|Ga0210400_10019845	All Organisms → cellular organisms → Bacteria	5258	Open in IMG/M
3300021170\|Ga0210400_11130796	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300021171\|Ga0210405_10441471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2S1	1023	Open in IMG/M
3300021181\|Ga0210388_10040617	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3856	Open in IMG/M
3300021401\|Ga0210393_10175462	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300021403\|Ga0210397_10515215	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300021406\|Ga0210386_10911281	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300021407\|Ga0210383_10823471	Not Available	794	Open in IMG/M
3300021407\|Ga0210383_10894787	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300021432\|Ga0210384_11464178	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300021433\|Ga0210391_10053280	All Organisms → cellular organisms → Bacteria	3216	Open in IMG/M
3300021475\|Ga0210392_10536676	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300022731\|Ga0224563_1015341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300022733\|Ga0224562_1003681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2S1	1155	Open in IMG/M
3300025906\|Ga0207699_10914986	Not Available	647	Open in IMG/M
3300026217\|Ga0209871_1062005	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300026356\|Ga0257150_1078369	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300026557\|Ga0179587_10767472	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300027505\|Ga0209218_1121477	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300027528\|Ga0208985_1041385	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300027662\|Ga0208565_1193120	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300027676\|Ga0209333_1170787	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300027681\|Ga0208991_1202080	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300027783\|Ga0209448_10066247	All Organisms → cellular organisms → Bacteria → Acidobacteria	1214	Open in IMG/M
3300027812\|Ga0209656_10182112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	1030	Open in IMG/M
3300027826\|Ga0209060_10481806	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300027842\|Ga0209580_10255863	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300027855\|Ga0209693_10267951	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300027908\|Ga0209006_10019051	All Organisms → cellular organisms → Bacteria	6226	Open in IMG/M
3300027908\|Ga0209006_10607704	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	903	Open in IMG/M
3300027911\|Ga0209698_10957522	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300027986\|Ga0209168_10271367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	837	Open in IMG/M
3300028759\|Ga0302224_10304377	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300028792\|Ga0307504_10255841	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300028800\|Ga0265338_10507420	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300028906\|Ga0308309_11303278	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300029910\|Ga0311369_10035996	All Organisms → cellular organisms → Bacteria → Proteobacteria	5609	Open in IMG/M
3300029943\|Ga0311340_11561285	Not Available	514	Open in IMG/M
3300029951\|Ga0311371_11585572	Not Available	722	Open in IMG/M
3300029951\|Ga0311371_12548268	Not Available	519	Open in IMG/M
3300030043\|Ga0302306_10211174	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300030053\|Ga0302177_10200124	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300030057\|Ga0302176_10266459	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300030057\|Ga0302176_10301588	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300030706\|Ga0310039_10054850	All Organisms → cellular organisms → Bacteria	1756	Open in IMG/M
3300030760\|Ga0265762_1001009	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5056	Open in IMG/M
3300030760\|Ga0265762_1055871	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300031231\|Ga0170824_103837397	All Organisms → cellular organisms → Bacteria → Acidobacteria	1171	Open in IMG/M
3300031231\|Ga0170824_116074125	Not Available	1133	Open in IMG/M
3300031231\|Ga0170824_123813746	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300031236\|Ga0302324_100881058	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1234	Open in IMG/M
3300031708\|Ga0310686_109466262	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300031715\|Ga0307476_10840385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300031718\|Ga0307474_10051819	All Organisms → cellular organisms → Bacteria	3030	Open in IMG/M
3300031823\|Ga0307478_10607041	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300031823\|Ga0307478_10665045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300031912\|Ga0306921_10515548	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300031941\|Ga0310912_10933241	Not Available	667	Open in IMG/M
3300031954\|Ga0306926_10447899	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300032160\|Ga0311301_10743365	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300032160\|Ga0311301_11451461	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	850	Open in IMG/M
3300032892\|Ga0335081_10007309	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	17660	Open in IMG/M
3300032898\|Ga0335072_10595960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1113	Open in IMG/M
3300032898\|Ga0335072_11018051	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	758	Open in IMG/M
3300032898\|Ga0335072_11778928	Not Available	510	Open in IMG/M
3300033405\|Ga0326727_10456991	Not Available	1135	Open in IMG/M
3300033547\|Ga0316212_1059433	Not Available	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.01%
Host-Associated	Host-Associated	2.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.10%
Aquatic	Environmental → Aquatic	17.91%
Plants	Host-Associated → Plants	2.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.90%
Freshwater	Environmental → Aquatic → Freshwater	14.18%
Peat	Environmental → Terrestrial → Peat	8.21%
Sediment	Environmental → Aquatic → Sediment	3.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.75%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.78%
Loam	Environmental → Terrestrial → Soil → Loam	17.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.18%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.75%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.21%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.73%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.24%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.46%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.46%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.22%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.73%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.99%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.49%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.75%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.75%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.75%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.75%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.75%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_121703621	3300000789	Soil	MTPKTKASSTVVERSSNNGSNPERERVFNAYRQWGYLEGDLDPL
JGI12659J15293_100978392	3300001546	Forest Soil	MTPKSETSNGGSSTAVAETPNASNPERERVFNAYRQFGYLEGDLDPIGFLRPRETPEL
JGI12635J15846_100436671	3300001593	Forest Soil	MTPKSKASNGGSSAAVIETSNSSNPERERVFNAYRQWGYLEGDLDPLGFLRPRNTPEL
JGIcombinedJ26739_1003923531	3300002245	Forest Soil	MTLKSKSSNGGAGAVIETSPKNDVNLERERVFNAFRQFGYLEGDLDPLGFLTP
JGIcombinedJ26739_1015001301	3300002245	Forest Soil	MATPKSKTTTGAAAVLGSPSKNGSSPERESAFNAFRQWGYLEGDLDPLGFL
JGI26341J46601_101562582	3300003219	Bog Forest Soil	MPTPKSKPSNGGARAAVLDTSSNSDRERVFSAFRQWGYLEGDLDPLGFLR
Ga0062385_105736152	3300004080	Bog Forest Soil	MATPKSKVTSALTETSPNNGANPERERVFNAFRQWGYLEGDLDPLGF
Ga0062384_1011287202	3300004082	Bog Forest Soil	MATLKSKITGSALTETPPNNGANPERERIFNAFRQWGYLEADLDPLGFLRPR
Ga0062387_1004400301	3300004091	Bog Forest Soil	MATPKSKTSTSSAVIENNGANPERERVFNAFRQWGYLEGDLDPL
Ga0062389_1012702531	3300004092	Bog Forest Soil	MTLKSKTSNGGSRAAVVESSNDSNPERERVFSAYRQWGYLEGDLDPLGFL
Ga0062386_1016427981	3300004152	Bog Forest Soil	MAIPKSRTSNGESAVIENNNAANPERERVFNAFRQWGYLEGDLDPLGFLR
Ga0066690_107842912	3300005177	Soil	MAIPKSKASNSTAGAAVIEPSASNSERERVFSVFRQWGYLEGD
Ga0070714_1007561042	3300005435	Agricultural Soil	MTPKTKTPAAVLDRASNNGSNPERDRIFSAYRQYGYLEGDLDPLGFLRP
Ga0070714_1016607772	3300005435	Agricultural Soil	MPKTKISGAPASAILDKSNQNGSNPERERVFAGYRQWGYLEG
Ga0070732_104892311	3300005542	Surface Soil	MTPKTKTAGAVVDRASTNGSNSERERVFNAYRQWGYLEGDLDP
Ga0070762_106292761	3300005602	Soil	MATLKSKSTGSTLTETLPNNGANPERERVFNAFRQWGYLE
Ga0070763_107653671	3300005610	Soil	MTPKSKASNGGAGAAVIETSNGSNLERERVFQAYRQFGYLEGDLDPLGF
Ga0068856_1026038642	3300005614	Corn Rhizosphere	MTPKAKNANGGSAAVIETPASNPERDRVFAAYRQYGYLEGDLDPLGFLRPRLAPELEREGEYAREA
Ga0070766_104796861	3300005921	Soil	MPTPKSKTSSSAAVIDTSANNGSNPERERVFNAFRQWGYL
Ga0070766_108306272	3300005921	Soil	MATQKSKVTSALIETSPDNGANPERERVFNAFRQWGYLEG
Ga0066789_101336432	3300005994	Soil	MTPKSKTSNGGSRAAVAETTNASNPERERVFNAYRQWGYLEGDLDPLGFL
Ga0070717_103855282	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPKTKISGAPASAILDKSNQNGSNPERERVFAAYRQWGYLEGDLDPL
Ga0070717_119412962	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MATPKSKTSNAGAGAALIETTNNGSNPERERVFEAFREWGYLEGDLDPLGFLRPRPHPSLQI
Ga0075029_1000831692	3300006052	Watersheds	MTPKSKTSSAVVDRASTNGSNPERERVFNAYRQWGYLEGDLDPLGF
Ga0075019_100116485	3300006086	Watersheds	MTPKSKTSNGGSGAALAETSNGSSPERERVFSAYRQWGYLE
Ga0075015_1001602672	3300006102	Watersheds	MTLKSKTSNGGSGAALAENNGSNPERERVFSAYRQWGYLEGD
Ga0075030_1000557851	3300006162	Watersheds	MTPKSKTSSAVVDRASTNGSNPERERVFNAYRQWGYLEGDLDPLGFLRPRP
Ga0070712_1004760881	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTPTSKTSGTVVDRASNNGSNPERERVFNAYRQWGYLEGDLDPL
Ga0070765_1019373952	3300006176	Soil	MATPKSKVPSALVETSPNNGANSERERVFNAFRQWGYL
Ga0066659_117077411	3300006797	Soil	MATPKTRTSDSARAALIESPNNGTNLDRERVFEAFREWGYLEGDLDPLGFLRPRPHPALDIDNE
Ga0099830_101102231	3300009088	Vadose Zone Soil	MATPKSTTSSGAAAVIDNAVNNGSNLDRERVFEAFREWGYLEGDLDPL
Ga0099830_104245182	3300009088	Vadose Zone Soil	MATPKTRTSDGARAALIESPNNGTNLDRERVFEAFREWGYLEGDLDPLGFLRPRPHPALDID
Ga0099827_111902891	3300009090	Vadose Zone Soil	MATPKTRTSDGARAALIESPDNGTNLNRDRVFEAFREWGYLEGDLDPLGFLRPRPHPA
Ga0116105_10613162	3300009624	Peatland	MTPKSKTSNGNAAVLESSSNNVNLERERVFNAFRQWGYLEGDLDPLGFLR
Ga0116113_10590702	3300009638	Peatland	MPTQKSKSSNGGARAAVIETSANLERESVFNAFRQWGYLEGDLDPLGFLRPRIAPE
Ga0116122_12916501	3300009639	Peatland	MPTQKSKSSNGGARAAVIETSANSERERVFSAFRQWGYLEGDLDPLGFLRP
Ga0116135_14721931	3300009665	Peatland	MATQKSKVTSALIETSPNNGANPERERVFNAFRQWGYLEGDLDPL
Ga0126373_111552832	3300010048	Tropical Forest Soil	MTPKTKTSSTVLDRASTNGSNPERERVFAAYRQWGYLEGDLDPLGFLRP
Ga0126376_126708702	3300010359	Tropical Forest Soil	MTPKSKISSTVLDRASANGTNPEREAVFAAYRQWGY
Ga0126372_103915832	3300010360	Tropical Forest Soil	MTPKTKTSSTVLDRASTNGTNPEREAVFAAYRQWGYLESD
Ga0126383_122423721	3300010398	Tropical Forest Soil	MPKTKISGAPASAVVDKSNQNGSNPERERVFAAYRQWGYLEGDL
Ga0137392_100452765	3300011269	Vadose Zone Soil	MATPKTRTSDGARAALIESPNNGTNLDRERVFEAFREWGYLEGDLLPLGFLRP
Ga0137399_103355501	3300012203	Vadose Zone Soil	MATPKPRTSDGAAAVIDTSSNNGSNPERERVFSAFRQWGYLEGDLDP
Ga0137399_112308972	3300012203	Vadose Zone Soil	MATLKSKTSSARTALIDTSKNGSNPERENVFNAFRQWGYLDGDLDPLGFLR
Ga0137381_107370993	3300012207	Vadose Zone Soil	MTPKSKTSNGGSRAAVAETTNGSNPERERIFNAYRQWGYLEGD
Ga0137367_106013421	3300012353	Vadose Zone Soil	MTPKSKLSGAAADRASTNGSDPDRERVFSAYRQFGYLEGD
Ga0137398_109443021	3300012683	Vadose Zone Soil	MATPKSKTSGGSAAVIDNSANNGSNPERERVFEAFREWGYLEGDLDPL
Ga0137416_116430741	3300012927	Vadose Zone Soil	MATPKSKTSSAAALIDSSASNGSHLERERVFSAFRQWGYLEGDLDPLGFLRPRIAPE
Ga0137404_116146632	3300012929	Vadose Zone Soil	MATAKPKTSSAVMDATARTNGSNPERERIFNAYRQWGYLEGDL
Ga0164299_108047862	3300012958	Soil	MTPKAKNSNGGSAAVIETTASNPERDRVFANYRQYGYLEGDLDPLGFLRPRLTPELDREGAY
Ga0157374_121038381	3300013296	Miscanthus Rhizosphere	MTPKSKNSNGGSAAVIETPASNAERERVFANYRQYAYLAGELDPLDFIRPRPTPEHASDGQYAR*
Ga0182015_109002672	3300014495	Palsa	MTPKSKSSNGAAGAAIIETSPKNDVNLERERVFNAFRQFGYLEGDLDPLGFLTPRPTPELQIESEYTR
Ga0187802_104233031	3300017822	Freshwater Sediment	MTPKSETSNSDSGAALAETVNGSNPERERVFSAYRQWGYLEGDLDPLGFLRPRET
Ga0187825_102620412	3300017930	Freshwater Sediment	MPTQKSKSPSAVLDTASTNGTNPERESVFSAFRQWGYLEGDLDPLGFLRP
Ga0187801_102092922	3300017933	Freshwater Sediment	MVTSKTRNSGAAVLETSLTNNGSNPERERVFSAYRQWGYLEGDLDPLGFLR
Ga0187803_104487241	3300017934	Freshwater Sediment	MPASKSSDSAGLMETSARNDGYNPQPSNPERERVFSAYRQWGYLEGDLDPLGFLRPRPH
Ga0187781_105823462	3300017972	Tropical Peatland	MTPRSKVSGAVLDRASTNGSNPERERVFAGYRQFGYLEGDLDPLGFLRPRPTPELEREGE
Ga0187781_109016102	3300017972	Tropical Peatland	MPTAKSESSAALAESTNGSNPERERVFSAYRQFGYLEG
Ga0187782_103230152	3300017975	Tropical Peatland	MATSKAKTSGTAALETSSSSNGSDPERERVFSAYRQWGYLEGDLDPLGFL
Ga0187816_104727001	3300017995	Freshwater Sediment	MTPKSETSNSDSGAALAETVNGSNPERQRVFSAYRQWGYLEGDLDPLGFLRPRETPELEHDGEYAR
Ga0187805_102528622	3300018007	Freshwater Sediment	MTAKTKNSSAVADQASTNGSNPERDRVFSAYRQWGYLE
Ga0187858_107177371	3300018057	Peatland	MPTQKSKSSNGGARAAVIETSANSERERVFSAFRQWGYLEGDLDPLGF
Ga0187772_100629633	3300018085	Tropical Peatland	MSAIKTKSSDAVTDSRASANGSNPERERVFSAYRQWGYLEGDLDPLGFL
Ga0187769_101971432	3300018086	Tropical Peatland	MPKTKPSAVIETSNNGSNSAPSPERERVFAAYRQWGYLEGDLDPLGFLR
Ga0210399_110067671	3300020581	Soil	MATPKSKVSNGGSGTAVIETLASNPERERVFSAFRQWGYLEGDLDPLGFLRPRIAPEL
Ga0210399_111071141	3300020581	Soil	MTSKTKTSNGGSRAAVAENSGSNSERERVFNAYRQWGYLEGDLD
Ga0210401_101033721	3300020583	Soil	MTPKIKTSNGGSRAAVAETNGSNPERERVFNAYRQWGYLDGDLD
Ga0210400_100198457	3300021170	Soil	MATSKSKVSNGASSSAVIETPASNTERERVFSAFRQWGYLEGDL
Ga0210400_111307962	3300021170	Soil	MATPKSKTSGGSAAVIDNSVNNGSNPERERVFEAFREWGYLEGDLDPLGFL
Ga0210405_104414711	3300021171	Soil	MATPKSKVPSALVETSPNNGAHSERERVFNAFRQWGYLDGDLDPLGFLRPRVAPE
Ga0210388_100406173	3300021181	Soil	MTPKSKTSNGGSRAAVIESAANPERERVFSAYRQWGYLEGDLDPL
Ga0210393_101754621	3300021401	Soil	MTPKSKASNGGAGAAVIETSNGSNLERERVFQAYRQFGYLEGDLD
Ga0210397_105152151	3300021403	Soil	MPTTKTKTSTQILQSSNGSDPERERVFAAYRQFGYLEGDLDPLGFLRPRPTPELET
Ga0210386_109112812	3300021406	Soil	MTPKSKASNGGAGAAVIETSNGSNLERERVFQAYRQFGYLEGDLDPLGFLRPREAPELEREGEYARAA
Ga0210383_108234712	3300021407	Soil	MTPKSKSSNGGSRAVVVESTSNPDRERIFNAYRQWGYLEGDLDPL
Ga0210383_108947872	3300021407	Soil	MTPKTKTSNGGSRAAVAETNGSNPGRERIFNAYRQWGYLEGDLDPLGFLRPRETPELEHE
Ga0210384_114641782	3300021432	Soil	MTPKSKASNGGAGAAVIETSNGSNLERERVFQAYRQFGYLEGDLDPLGFLRPREAPELEREG
Ga0210391_100532803	3300021433	Soil	MATLKSKSTGSTLTETLPNNGANPERERVFNAFRQWGYLEADLDP
Ga0210392_105366762	3300021475	Soil	MTPKSKSSNGSQAAVADTTNAERERIFNIYRQWGYLEGDLDPLGFLHPRD
Ga0224563_10153411	3300022731	Soil	MTTLKTKTSGGGVLVASASGNGLNPERERVFEAFREWGYLEGDLDPLGF
Ga0224562_10036811	3300022733	Soil	MPTQKSKSPNGGATSAVIETSANLERERVFSAFRQWGYLEADLDPLGFLR
Ga0207699_109149861	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTPKAKNSNGGSAAVIETPASNPERDRVFANYRQYGYLEGDLDPLGFLRPRLT
Ga0209871_10620051	3300026217	Permafrost Soil	MTPKSKTSNGGSRAAVAETTNASNPERERVFNAYRQWGYLEGDLDPLGFLRPRETPE
Ga0257150_10783692	3300026356	Soil	MATSKLNAPTGATSAGIIEPSPKNGSNPERERVFSAFRQWGYLEGDLDPLGY
Ga0179587_107674722	3300026557	Vadose Zone Soil	MTPKSKTSNGRAVAAIAETNSSNPERERVLNIYRQWGYLEGDLDPL
Ga0209218_11214771	3300027505	Forest Soil	MTPKSKTSNVILDRASTNGSNPERERIFNLYRQFGYLEGDLDPLGFLHPR
Ga0208985_10413851	3300027528	Forest Soil	MTPKSKTSNGGSAAAVADTVNLSRNGGNSERERIFDVYRQWGYLEADLDPLGFL
Ga0208565_11931201	3300027662	Peatlands Soil	MATPKSKTSNTAATALVESRTNSNGSNPERERIFSAFRQWGYLEGDLDPLGFLRPRPT
Ga0209333_11707871	3300027676	Forest Soil	MATLNSKVTSSALTETPSNNGANPERERVFNAFRQWGY
Ga0208991_12020802	3300027681	Forest Soil	MATPKSKTSSGSAAVIDNSANNGSNQERERVFEAFREWGYLEGDLD
Ga0209448_100662472	3300027783	Bog Forest Soil	MATPKSKTSTSSAVIENNGANPERERVFNAFRQWGYLEGDLDPLGFLRPRPTPATLRFLLRRRRRRA
Ga0209656_101821121	3300027812	Bog Forest Soil	MPTPKSKPSNGGARAAVLDTSSNSDRERVFSAFRQWGYLEGDLDPLGFLRPRLAPELQI
Ga0209060_104818061	3300027826	Surface Soil	MTPKSNPSTAVLDRSSNNGSNPERERVFGAYRQFGYL
Ga0209580_102558631	3300027842	Surface Soil	MTPKTKTAGAVVDRASTNGSNSERERVFNAYRQWGYLEGDLDPLG
Ga0209693_102679511	3300027855	Soil	MTPKSKASNGGAGAAVIETSNGSNLERERVFQAYRQFGYLEGDLDPLGFLRPREAPELER
Ga0209006_100190511	3300027908	Forest Soil	MTLKSKSSNGGAGAVIETSPKNDVNLERERVFNAFRQFGYLEGDLDPLGFLNP
Ga0209006_106077041	3300027908	Forest Soil	MATPKSKTTTGAAAVLGSPSKNGSSPERESAFNAFRQWGYLEGDLDPLGFLRPRPTPEL
Ga0209698_109575222	3300027911	Watersheds	MTPKSKTSGTVVDRASTNGSNPERERVFNAYRQWGYLEGDLDPLGFLR
Ga0209168_102713671	3300027986	Surface Soil	MTPKIKTSNGGSRAAVAETNGSNPERERVFNAYRQWGYLDGDLDPLGFLRP
Ga0302224_103043771	3300028759	Palsa	MTPKSKTANGGAGAAETSKSSNLERESVFNAFRQWGYLEGDLDPLGFLRPRPTVE
Ga0307504_102558412	3300028792	Soil	MTPKTKTSGTVVDRASTNGSNPERERVFNAYRQWGYLEGD
Ga0265338_105074202	3300028800	Rhizosphere	MTPKSKTSNGGSGAAVIETSNGSNLERERVFNAYRQWGYLEGDLD
Ga0308309_113032781	3300028906	Soil	MATPKSKVPSALVETSPNNGAHSERERVFNAFRQWGYLDGDLDPLSFLR
Ga0311369_100359961	3300029910	Palsa	MSPKSKTANGGGGASLVDAAPQTDVNPERERVFNAFRQWGYLEGDLDPLGF
Ga0311340_115612852	3300029943	Palsa	MTPKSKPSNGTAVLDKPNADRERIFNAYRQWGYLEGDLDPLGFLRPRETPELEREGEYAR
Ga0311371_115855721	3300029951	Palsa	MTPKSKPSNGTAVLDKPNADRERIFNAYRQWGYLEGDLDPLGF
Ga0311371_125482682	3300029951	Palsa	MTSKLKASAAVLDRTADNGSNSERERVFNAYRQWGYLEGDLD
Ga0302306_102111741	3300030043	Palsa	MSSPKSKSANGNAAAVAENNGNNLERERVFNAFRQWGYLEGDLD
Ga0302177_102001242	3300030053	Palsa	MTPKSKTANGGAGAAETSKSSNLERESVFNAFRQWGYLEGDL
Ga0302176_102664591	3300030057	Palsa	MSSPKSKSANGNAAAVAENNGNNLERERVFNAFRQWGYLEGDLDPLGFLRPRPTVELQI
Ga0302176_103015881	3300030057	Palsa	MTPKSKTANGGAGAAETSKSSNLERESVFNAFRQWGYLEGDLDPLGFLR
Ga0310039_100548501	3300030706	Peatlands Soil	MTQKSKSSNDGARTAVIETSTNPERERIFNAYRQWGYLEGDL
Ga0265762_10010091	3300030760	Soil	MTPKSKTSNVILDRASTNGSNPERERIFNLYRQFGYLEGDLDPLGFLHP
Ga0265762_10558711	3300030760	Soil	MPTPKSKPSNGGARTAVIDPSANSERERVFSAFRQWGYLEGDLDPLGFLRPRIAPE
Ga0170824_1038373972	3300031231	Forest Soil	MTPKSKTSNGGSRAAVAETNGSNPERERVFNVYRQWGYLEGDLDPLGFLHPR
Ga0170824_1160741252	3300031231	Forest Soil	MTPKSKASNGGSRAAVAETKIAETNGSNPERERIFNIYRQWG
Ga0170824_1238137461	3300031231	Forest Soil	MSPKSKSSNGGSSTAVVETASSSNPERERVFNAYRQWGYLEGDLD
Ga0302324_1008810583	3300031236	Palsa	MPQKSKTSNGGSSTAIVTTSNNGSETERERVFNAFRQWGYLEGDLDPLGFLRPRITPELQIESEYS
Ga0310686_1094662621	3300031708	Soil	MTQKSKPSGVLDRASKNGSNPDRERVFAAYRQWGYMEADLDPLGFLRPRETPELEKEGDY
Ga0307476_108403851	3300031715	Hardwood Forest Soil	MTPKSKSSNGGSGAAVVETASSSNAERERVFGTYRQWGYLEGDLDPLGFLRPR
Ga0307474_100518191	3300031718	Hardwood Forest Soil	MTPKSKSSNGAAGAAVIETSPKNDVNLERERVFNAFRQFGYLEGDLDPLGF
Ga0307478_106070412	3300031823	Hardwood Forest Soil	MTPKSKTSNGRSVAAVAETNGSNSERERIFNTYRQWGYLEGD
Ga0307478_106650451	3300031823	Hardwood Forest Soil	MTPKSKSSNGGSGAAVVETASSSNAERERVFGTYRQWGYLEGDLDPLGFLRPREAP
Ga0306921_105155481	3300031912	Soil	MTPKSKTSSAVADRASTNGTNPERERVFSAYRQFGYLE
Ga0310912_109332412	3300031941	Soil	MTPKSKTSDAVLDRASTNGTNPEREGVFAAYRQWGYLEGDLDPL
Ga0306926_104478992	3300031954	Soil	MTLTSKTSGTVVDRASTNGTNPERERVFAAYRQWGYLEGDLDPLGFLRPRPALE
Ga0311301_107433651	3300032160	Peatlands Soil	MTPKPKTSNGSSRTSVIETTPSNPERERVFSAYRQWGYLEGDLD
Ga0311301_114514611	3300032160	Peatlands Soil	MTPKTKTSNGGSRATVAETNGSNPERERVFSAYRQWGYLEGDLDPLGFLRPRETPELEHDGEYAR
Ga0335081_100073091	3300032892	Soil	MTPKTQTPAAAVDRAASNGSNPERERVFATYRQWGYLEGDLDPLGFLRPRYT
Ga0335072_105959602	3300032898	Soil	MPKTKTPGARTSAVLDKSNQNGSNPERERVFNAYRQWGYLEGDLDPLGFL
Ga0335072_110180511	3300032898	Soil	MPTSKSKTTGAVLESSASNNGSNPERERVFNAYRQYG
Ga0335072_117789282	3300032898	Soil	MTPKSKSSNGGSGAAVAETTNLEQLEREQAFEQFRAWGYLEADLDPL
Ga0326727_104569913	3300033405	Peat Soil	MTPKSSASNGGSGAVVVETTNGSNPERERVFNAYRQWGYLEGDLDPLGFLRPRYTPELE
Ga0316212_10594331	3300033547	Roots	MYSYDCDPEIMTPKSKTSNGGSRAAVIETAANPERERVFNAYRQWGYLEGDLDP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059218

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences