Metagenome / Metatranscriptome Family F059375

Basic Information
Family ID	F059375
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	46 residues
Representative Sequence	AGLSAAQIAAQLRNPSSPVAQAIDGSAKVIVAAINQVLHDQAGQG
Number of Associated Samples	124
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	91.04 %
% of genes from short scaffolds (< 2000 bps)	92.54 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Most Common Taxonomy
Group	Bacteria (71.642 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.910 % of family members)
Environment Ontology (ENVO)	Unclassified (18.657 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.015 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.58% β-sheet: 0.00% Coil/Unstructured: 53.42%
Feature Viewer

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Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF04264	YceI	9.70
PF07992	Pyr_redox_2	8.21
PF02627	CMD	5.97
PF02566	OsmC	5.97
PF14833	NAD_binding_11	3.73
PF10397	ADSL_C	2.24
PF04248	NTP_transf_9	1.49
PF00248	Aldo_ket_red	1.49
PF13193	AMP-binding_C	1.49
PF01475	FUR	0.75
PF08546	ApbA_C	0.75
PF11251	DUF3050	0.75
PF00491	Arginase	0.75
PF00578	AhpC-TSA	0.75
PF17197	DUF5134	0.75
PF06445	GyrI-like	0.75
PF04229	GrpB	0.75
PF02371	Transposase_20	0.75
PF02628	COX15-CtaA	0.75
PF03640	Lipoprotein_15	0.75
PF01906	YbjQ_1	0.75
PF01850	PIN	0.75
PF13631	Cytochrom_B_N_2	0.75
PF11271	PorA	0.75
PF13560	HTH_31	0.75
PF13358	DDE_3	0.75
PF07883	Cupin_2	0.75
PF00291	PALP	0.75
PF14192	DUF4314	0.75
PF01244	Peptidase_M19	0.75
PF05960	DUF885	0.75
PF04545	Sigma70_r4	0.75
PF07040	DUF1326	0.75
PF07732	Cu-oxidase_3	0.75
PF00561	Abhydrolase_1	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	9.70
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	5.97
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	5.97
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	5.97
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	5.97
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	1.49
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.75
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.75
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.75
COG1612	Heme A synthase	Coenzyme transport and metabolism [H]	0.75
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.75
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.75
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	0.75
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.75
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.75
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.75
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.75

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.64 %
Unclassified	root	N/A	28.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.64 %
Unclassified	root	N/A	28.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.64 %
Unclassified	root	N/A	28.36 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	55.22 %
Unclassified	root	N/A	28.36 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	52.24 %
Unclassified	root	N/A	28.36 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38.81 %
Unclassified	root	N/A	28.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.36 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	4.48 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.73 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.24 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.49 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.36 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	2.24 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.99 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	2.99 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.49 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.49 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.75 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.75 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.36 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	2.24 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.99 %
unclassified Nocardioidaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae	2.99 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.49 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.75 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.75 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	0.75 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.36 %
Arthrobacter agilis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter agilis	2.24 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.99 %
Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	2.99 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.49 %
Kribbella catacumbae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella catacumbae	0.75 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	0.75 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.75 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005366\|Ga0070659_101985426	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300005434\|Ga0070709_10989676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	668	Open in IMG/M
3300005435\|Ga0070714_101157201	All Organisms → cellular organisms → Bacteria → Terrabacteria group	754	Open in IMG/M
3300005435\|Ga0070714_102004974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300005436\|Ga0070713_100049342	All Organisms → cellular organisms → Bacteria	3472	Open in IMG/M
3300005437\|Ga0070710_11401050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300005467\|Ga0070706_101470634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	623	Open in IMG/M
3300005471\|Ga0070698_101062440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	758	Open in IMG/M
3300005535\|Ga0070684_100418025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1237	Open in IMG/M
3300005541\|Ga0070733_10141377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1558	Open in IMG/M
3300005545\|Ga0070695_100334794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1129	Open in IMG/M
3300005564\|Ga0070664_101806831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300005577\|Ga0068857_100352232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1364	Open in IMG/M
3300005602\|Ga0070762_11028921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella catacumbae	565	Open in IMG/M
3300005618\|Ga0068864_101443234	Not Available	690	Open in IMG/M
3300005764\|Ga0066903_107202359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300005993\|Ga0080027_10427516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300006052\|Ga0075029_101067650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300006163\|Ga0070715_11023118	Not Available	516	Open in IMG/M
3300006173\|Ga0070716_101394049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	570	Open in IMG/M
3300006175\|Ga0070712_101308640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	632	Open in IMG/M
3300006804\|Ga0079221_11711323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300006804\|Ga0079221_11750314	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300006854\|Ga0075425_103055028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	511	Open in IMG/M
3300006904\|Ga0075424_100801837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1005	Open in IMG/M
3300006954\|Ga0079219_10951080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	704	Open in IMG/M
3300009521\|Ga0116222_1054095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1747	Open in IMG/M
3300009525\|Ga0116220_10132994	Not Available	1064	Open in IMG/M
3300009624\|Ga0116105_1166707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300009700\|Ga0116217_10026694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4462	Open in IMG/M
3300009824\|Ga0116219_10106252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1637	Open in IMG/M
3300009824\|Ga0116219_10313991	Not Available	882	Open in IMG/M
3300009824\|Ga0116219_10710252	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300010043\|Ga0126380_10590888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	872	Open in IMG/M
3300010362\|Ga0126377_12890388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	554	Open in IMG/M
3300010364\|Ga0134066_10106392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	822	Open in IMG/M
3300010379\|Ga0136449_100186623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3976	Open in IMG/M
3300010396\|Ga0134126_11979240	All Organisms → cellular organisms → Bacteria → Terrabacteria group	637	Open in IMG/M
3300010399\|Ga0134127_10789316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	997	Open in IMG/M
3300010867\|Ga0126347_1197939	Not Available	990	Open in IMG/M
3300010876\|Ga0126361_10417727	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300011270\|Ga0137391_11575034	Not Available	501	Open in IMG/M
3300012200\|Ga0137382_10501300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300012202\|Ga0137363_10720488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	845	Open in IMG/M
3300012207\|Ga0137381_10380744	Not Available	1230	Open in IMG/M
3300012360\|Ga0137375_10225998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1748	Open in IMG/M
3300012923\|Ga0137359_10824638	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300012960\|Ga0164301_11107275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	630	Open in IMG/M
3300014201\|Ga0181537_10025224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4148	Open in IMG/M
3300014745\|Ga0157377_11033058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300014969\|Ga0157376_12737709	Not Available	533	Open in IMG/M
3300015371\|Ga0132258_12391043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1324	Open in IMG/M
3300017792\|Ga0163161_10550907	All Organisms → cellular organisms → Bacteria → Terrabacteria group	945	Open in IMG/M
3300017821\|Ga0187812_1008961	All Organisms → cellular organisms → Bacteria	3468	Open in IMG/M
3300017821\|Ga0187812_1262551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300017823\|Ga0187818_10077862	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300017924\|Ga0187820_1091234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	867	Open in IMG/M
3300017937\|Ga0187809_10110459	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300017943\|Ga0187819_10344967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	861	Open in IMG/M
3300017959\|Ga0187779_10273976	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300017959\|Ga0187779_11112686	Not Available	552	Open in IMG/M
3300017972\|Ga0187781_10399871	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300018001\|Ga0187815_10499139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521	Open in IMG/M
3300020081\|Ga0206354_10895764	Not Available	644	Open in IMG/M
3300020579\|Ga0210407_11037813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300020581\|Ga0210399_10677797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	849	Open in IMG/M
3300020582\|Ga0210395_11290885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300021088\|Ga0210404_10759461	Not Available	554	Open in IMG/M
3300021374\|Ga0213881_10385477	Not Available	630	Open in IMG/M
3300021388\|Ga0213875_10138257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1139	Open in IMG/M
3300021403\|Ga0210397_11233374	Not Available	581	Open in IMG/M
3300021420\|Ga0210394_10334731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1330	Open in IMG/M
3300021479\|Ga0210410_11036285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	710	Open in IMG/M
3300022499\|Ga0242641_1025329	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300022521\|Ga0224541_1016768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	788	Open in IMG/M
3300022533\|Ga0242662_10076239	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300022709\|Ga0222756_1051459	Not Available	618	Open in IMG/M
3300022712\|Ga0242653_1088379	Not Available	554	Open in IMG/M
3300022718\|Ga0242675_1077698	Not Available	604	Open in IMG/M
3300023056\|Ga0233357_1010213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1017	Open in IMG/M
3300024249\|Ga0247676_1016555	Not Available	1152	Open in IMG/M
3300024323\|Ga0247666_1058236	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300024331\|Ga0247668_1012720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1749	Open in IMG/M
3300025898\|Ga0207692_10988946	Not Available	555	Open in IMG/M
3300025921\|Ga0207652_10438900	Not Available	1177	Open in IMG/M
3300025928\|Ga0207700_11410612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	619	Open in IMG/M
3300025928\|Ga0207700_11775430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	543	Open in IMG/M
3300025929\|Ga0207664_11770585	Not Available	540	Open in IMG/M
3300025929\|Ga0207664_11798581	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300025931\|Ga0207644_11178931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300026041\|Ga0207639_11343828	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300026324\|Ga0209470_1216964	Not Available	793	Open in IMG/M
3300027590\|Ga0209116_1151540	Not Available	503	Open in IMG/M
3300027604\|Ga0208324_1064670	Not Available	1049	Open in IMG/M
3300027619\|Ga0209330_1152588	Not Available	520	Open in IMG/M
3300027725\|Ga0209178_1062352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1207	Open in IMG/M
3300027765\|Ga0209073_10147960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter agilis	865	Open in IMG/M
3300027854\|Ga0209517_10072947	Not Available	2427	Open in IMG/M
3300027855\|Ga0209693_10128980	Not Available	1251	Open in IMG/M
3300027857\|Ga0209166_10321348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	812	Open in IMG/M
3300027867\|Ga0209167_10318267	Not Available	843	Open in IMG/M
3300027867\|Ga0209167_10658048	Not Available	573	Open in IMG/M
3300027879\|Ga0209169_10072967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1775	Open in IMG/M
3300027905\|Ga0209415_10518645	Not Available	911	Open in IMG/M
3300028906\|Ga0308309_10359457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1243	Open in IMG/M
3300030490\|Ga0302184_10060609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1808	Open in IMG/M
3300030509\|Ga0302183_10063893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1457	Open in IMG/M
3300030524\|Ga0311357_10233313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1786	Open in IMG/M
3300031027\|Ga0302308_10858862	Not Available	501	Open in IMG/M
3300031234\|Ga0302325_10211795	All Organisms → cellular organisms → Bacteria	3311	Open in IMG/M
3300031754\|Ga0307475_10402091	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300031765\|Ga0318554_10796734	All Organisms → cellular organisms → Bacteria → Terrabacteria group	528	Open in IMG/M
3300031777\|Ga0318543_10498036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546	Open in IMG/M
3300031795\|Ga0318557_10232543	Not Available	843	Open in IMG/M
3300031820\|Ga0307473_10766257	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300031896\|Ga0318551_10413120	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300031912\|Ga0306921_12014928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300031945\|Ga0310913_10482078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	881	Open in IMG/M
3300032008\|Ga0318562_10754958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300032065\|Ga0318513_10183183	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300032067\|Ga0318524_10488438	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300032076\|Ga0306924_11656816	Not Available	672	Open in IMG/M
3300032160\|Ga0311301_10200174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3426	Open in IMG/M
3300032160\|Ga0311301_10943657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1153	Open in IMG/M
3300032174\|Ga0307470_10089582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1727	Open in IMG/M
3300032180\|Ga0307471_102528864	Not Available	650	Open in IMG/M
3300032770\|Ga0335085_12224178	Not Available	551	Open in IMG/M
3300032782\|Ga0335082_10475831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter agilis	1112	Open in IMG/M
3300032828\|Ga0335080_10668816	Not Available	1085	Open in IMG/M
3300032893\|Ga0335069_11253736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter agilis	809	Open in IMG/M
3300032897\|Ga0335071_10972344	Not Available	796	Open in IMG/M
3300032954\|Ga0335083_10980965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	666	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.30%
Host-Associated	Host-Associated	9.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.84%
Plants	Host-Associated → Plants	9.70%
Aquatic	Environmental → Aquatic	7.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.87%
Freshwater	Environmental → Aquatic → Freshwater	6.72%
Peat	Environmental → Terrestrial → Peat	5.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.73%
Sediment	Environmental → Aquatic → Sediment	0.75%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.75%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Loam	Environmental → Terrestrial → Soil → Loam	18.66%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.21%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.46%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.22%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.22%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.24%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.75%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.91%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.48%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.99%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.24%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.49%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.49%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.49%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.49%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.75%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.75%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.75%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.75%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070659_1019854261	3300005366	Corn Rhizosphere	VLAGLSAGQIASQLRNPSSPVAKAIDGSAKVIIAAIDQVLHEHPAH*
Ga0070709_109896761	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LAGLSAAQIAAQLRNPSSPVAQAIDGSAKVIVAAINQVLHNQAGQG*
Ga0070714_1011572012	3300005435	Agricultural Soil	SAAQIAAQLRNPSSPVAQAIDGSAKVIITAINQVLHDQASRG*
Ga0070714_1020049741	3300005435	Agricultural Soil	AGLSATQIAADLRDPSSPVAQAIDGSANVIIAAINQVLHHPASQG*
Ga0070713_1000493421	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AAQIAARLRDPASPVAQAIDGAAKVIIAAINQVLHDQVTRG*
Ga0070710_114010502	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	AGLSAAQIAAQLRNPSSPVAQAIDGSAKVIITAINQVLHDQASRG*
Ga0070706_1014706341	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	PQVLAGLSAAQIAAQLRDPSSPVARAIDASAQVIINHTNQVLRDRAAHNQA*
Ga0070698_1010624401	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VLAGLSAAQIATQLRNPSSSVAQAIDGSAKVIVAAINQILHDQAGRG*
Ga0070684_1004180252	3300005535	Corn Rhizosphere	AGLSAAQIAAQLRDPSSPVAQAIDASAQVIINQINQVLRDQGVA*
Ga0070733_101413772	3300005541	Surface Soil	YNPQILAGLSAAQIASQLANPSSQVAQAIDGSARVIITAIDQVLHDKPALRAARAGA*
Ga0070695_1003347941	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LAGLSAAQIAAQLRDPSSPVARAIDASAQVIINHINQVLRDRAAHNQA*
Ga0070664_1018068311	3300005564	Corn Rhizosphere	VIAGSQYSPQVLAGLSAAQIAAQLRDPSSPVARAIDASAQVIINHINQVLRDRAAHNQA*
Ga0068857_1003522321	3300005577	Corn Rhizosphere	SAAQIAAQLRDPSSPVARAIDASAQVIINHINQVLRDRAAHNQA*
Ga0070762_110289211	3300005602	Soil	PQVLAGLSAAQIASQLSNPSSPVAQAVDGSAQVIIAAIDQVLHDETTPRLATGVSGG*
Ga0068864_1014432341	3300005618	Switchgrass Rhizosphere	QIASQLKNPDNPVARAIDGSAQVIITAINQVLHDTVPRG*
Ga0066903_1072023591	3300005764	Tropical Forest Soil	LAGAQFDPQVLAGLSAAQIAAQLRNPSSPVAQAIDSSAQVIIAAINQVLHHPADHG*
Ga0080027_104275162	3300005993	Prmafrost Soil	VLAGLSAAQIASQLSSPASPVARAVDGSAQAIIAAIDQVLHTQTARS*
Ga0075029_1010676502	3300006052	Watersheds	PQVLAGLSAAQIASQLSNPASPVAQAIDGSAQVIVAAIDQVLHDKTAQQPATGVSGG*
Ga0070715_110231181	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	NPQVLTGLSAAQIASQLSNPSSPVAQAIDGSAQVIIAAIDQVLHTKTVR*
Ga0070716_1013940492	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	QIAAQLRNPSSPVAQAIDGSAKVIVAAINQVLHDQAGQG*
Ga0070712_1013086401	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	QYSPQVLAGLSAAQIAAQLRDPSSPVAQAIDASAQVIINQINQVLRDHATRSQA*
Ga0079221_117113232	3300006804	Agricultural Soil	GLSAAQIAAQLRNPSSPVAQAIDGSAKVIITAINQVLHDQAIRG*
Ga0079221_117503142	3300006804	Agricultural Soil	ADLRDPSSPVAQAIDGSANVIIAAINQILHDQASQG*
Ga0075425_1030550282	3300006854	Populus Rhizosphere	LSAAQIAARLRDPASPVAQAIDGAAKVIIAAINQVLHDQVTRG*
Ga0075424_1008018372	3300006904	Populus Rhizosphere	AGPRRLSAGQIASQFRNPSSPAAKAIDGSAKVIIAAIDQVLHKHPAH*
Ga0079219_109510801	3300006954	Agricultural Soil	AAQIAAQLRNPSSPVAQAIDGSAKVIVAAINQVLHDQAGQG*
Ga0116222_10540951	3300009521	Peatlands Soil	QVLAGLSAAQIADQLSKPSSPVAQAIDGSAKVIIAAIDQVLQASSGRG*
Ga0116220_101329941	3300009525	Peatlands Soil	VLAGLSAAQIASQLSNPSSPVAQAIDGSAQVIITALEQVLHDKTAQQPATGVSGG*
Ga0116105_11667072	3300009624	Peatland	LAGLSAAQIASRLSQPASPVARAIDGSAQVIVAAIDQVRHDQTARS*
Ga0116217_100266941	3300009700	Peatlands Soil	VQGLSAAQIAGQLSNPSSPVAKAIDGSASVIIAAIDQILHDTAARS*
Ga0116219_101062524	3300009824	Peatlands Soil	VLAGLSAAQIADQLGNPSSPVAQAVDGSAKVIIAAIDQVLHANSGRG*
Ga0116219_103139912	3300009824	Peatlands Soil	VLAGLSAAQIASQLSNPASPVAQAIDGSAQVIVAAIDQVLHDKTAQQPATGVSGG*
Ga0116219_107102522	3300009824	Peatlands Soil	VLAGLSAAQIADQLGNPSSPVAQAVDGSAKVIIAAIDQVLQASSGRG*
Ga0126380_105908881	3300010043	Tropical Forest Soil	LSAAQIAAQLRDPSSPVARAIDASAQVIINQINQVLRDRAAQT*
Ga0074046_103060491	3300010339	Bog Forest Soil	QLSNPSSPVAQAIDGSAQVIVAAIDQILLDKTARS*
Ga0126377_128903882	3300010362	Tropical Forest Soil	GLSATQIAADLRDPSSPVAQAIDGSANVIIAAINQVLHHPASQG*
Ga0134066_101063921	3300010364	Grasslands Soil	RDPSSPVAQAIDASAQVIINQINQVLRDRATQRQA*
Ga0136449_1001866232	3300010379	Peatlands Soil	VLAGLSAAQIASQLSHPSSPVAQAIDGSAQVIVTAIDQVLHDKTAPQLATGGSGG*
Ga0134126_119792402	3300010396	Terrestrial Soil	AGLSAAQIAAQLRNPSSPVAQAIDGSAKVIVAAINQVLHDQAGQG*
Ga0134127_107893163	3300010399	Terrestrial Soil	SQYSPQVLAGLSAAQIAAQLRDPSSPVARAIDASAQVIINQINQVLRDRAGQSRA*
Ga0126347_11979392	3300010867	Boreal Forest Soil	YDPQVLAGLSAAQIASQLSNPSSPVAQAVDGSAKVIITAIGQVLHDQAARS*
Ga0126361_104177271	3300010876	Boreal Forest Soil	QIASQLATPSSPVAQAIDGAAKVIVAAIDQVLHTAAGPG*
Ga0137391_115750341	3300011270	Vadose Zone Soil	QLRDPASPVAKAVDGSARVIIAAIDQVLHETPAR*
Ga0137382_105013002	3300012200	Vadose Zone Soil	GLSATQIAAQLRNPSSPVAQAIDGSAKVIVAAINQVLHDQVGQG*
Ga0137363_107204882	3300012202	Vadose Zone Soil	VLTGLSTAQIAAQLRNPSSPVAEAVDGSAKVIVAAINQVLHDQAGRG*
Ga0137381_103807441	3300012207	Vadose Zone Soil	AQLRNPSSPVAQAIDGSAKVIVAAINQLLHDQAGQG*
Ga0137375_102259983	3300012360	Vadose Zone Soil	AAQIAAQLRNPPSPVAQAIDGSAKVIVAAINQLLHDQASGG*
Ga0137359_108246381	3300012923	Vadose Zone Soil	LSTPSSPVAQAVDGAAKVIIAAIDQVLHAEAGRG*
Ga0164301_111072752	3300012960	Soil	AAQLRNPSSPVAQAIDGSAKVIVAAINQVLHDQAGQG*
Ga0181537_100252246	3300014201	Bog	YDPQVLAGLSAAQIASQLSNPSSPVAQAVDGSAQVIIAAIDQVLHDKTAPRLATGVSGGRNPGRA*
Ga0157377_110330581	3300014745	Miscanthus Rhizosphere	PQVLAGLSAGQIASQLRNPSSPVAKAIDGSAKVIIAAIDQVLHEHPAH*
Ga0157376_127377092	3300014969	Miscanthus Rhizosphere	AVLAGLSATQIASQLKNPDSPVARAIDGSAQVIITAINQVLHDTVPRG*
Ga0132258_123910433	3300015371	Arabidopsis Rhizosphere	PQVLAGLSAAQIAAQLRNPSSPVAQAIDGSAKVIVAAINQILHDQAGQG*
Ga0163161_105509072	3300017792	Switchgrass Rhizosphere	DPQVLAGLSAAQIAAQLRNPSSPVAQAIDGSAKVIVAAINQVLHDQAGQG
Ga0187812_10089612	3300017821	Freshwater Sediment	VLAGLSAAQIAGQLSNPSSPVAQAIDGSAKVVIAAIGQVLQASSGRG
Ga0187812_12625511	3300017821	Freshwater Sediment	VLAGLSARQIASQLGDPSIPVAQAVDGSAQVIVAAIDHVLHDHAADGS
Ga0187818_100778621	3300017823	Freshwater Sediment	PQVLAGLSAAQIAGQLSNPSSPVTQAIDGSAKVVIAAIGQVLQASSGRG
Ga0187820_10912343	3300017924	Freshwater Sediment	RQIASQLADPSSPVAQAVDGSAQVIIAAIDHVLRGHAAGSSA
Ga0187809_101104592	3300017937	Freshwater Sediment	SAAQIAGQLRNPSSPVAQAVDGSAKVIIAAIDQVLQANTGRG
Ga0187819_103449672	3300017943	Freshwater Sediment	VLAGLSARQIASQLGDPSIPVAQAVDGSAQVIVAAIDHVLHDHAADGSA
Ga0187779_102739763	3300017959	Tropical Peatland	NQLSNPSSPVAQAIDGSANVIIAAIDQVLQEDLSHG
Ga0187779_111126861	3300017959	Tropical Peatland	PQVLAGLSASQIASQLRNPSSPVAKAIDGSAKAIIAAIDQVLHEHAAR
Ga0187781_103998711	3300017972	Tropical Peatland	GLSAAQIAGQLSNPSSPVARAVDGSAKAIISAIDQVLQAGSGRC
Ga0187815_104991392	3300018001	Freshwater Sediment	AGLSARQIASQLGDPSIPVAQAVDGSAQVIVAAIDHVLHDHAADGSA
Ga0206354_108957641	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	QVLAGLSAAQIAAQLRNPSSPVAQAIDGSAKVIVAAINQVLHDQAGQG
Ga0210407_110378132	3300020579	Soil	GAQYSPQVLAGLSAAQIASQLRTPSSPVAQAVDGAAKVIIAAIEQVLHANTGHG
Ga0210399_106777972	3300020581	Soil	LAGLSAAQIASQLSNPSSPVAQAVDGSAKVIITAIDQVLHDQTTRR
Ga0210395_112908851	3300020582	Soil	LAGLSAAQIAGQLSDPASPVAPAIDGSAQVIVTAIDQVLHDKTGPS
Ga0210404_107594611	3300021088	Soil	QVLPGLSAAQIASQLSDPASPVAQAIDGSAQVIVAAIDQVLHDKAALQPATGVPAG
Ga0213881_103854772	3300021374	Exposed Rock	PQVLAGLSATQIAAELRDPSSPVAQAIDGSAKVIIAAIDQVLHDQSARG
Ga0213875_101382573	3300021388	Plant Roots	AGLSATQIAAELRDPSSPVAQAIDGSAKVIIAAIDQVLHDQSARG
Ga0210397_112333742	3300021403	Soil	NPQVLAGLSAAQIASQLSNPSSPVAQAIDGSAQVIVAAIDQVLHDQTAPRPATGVSGGSRVPSGS
Ga0210394_103347313	3300021420	Soil	QLRNPASPVAQAIDGSAKVIITAINQVLHDQAIRG
Ga0210410_110362851	3300021479	Soil	LAGLSAAQIAAQLRNPASPVAQAIDGSAKVIITAINQVLHDQAIRG
Ga0242641_10253291	3300022499	Soil	IASQLATPSSPVAQAIDGAAKVIIAAIDQVLPAGAGRG
Ga0224541_10167681	3300022521	Soil	VLAGLSAAQIASQLTDPSSQVAQAIDGSAQVIITAIDQVLHGGAGA
Ga0242662_100762391	3300022533	Soil	PQVLAGLSATQIASQLGNPSSPVARAIDGSAQVIIAAIDQVLHDTSPQAGGATG
Ga0222756_10514591	3300022709	Soil	VLAGLSATQIASQLAKPSSPVAQAIDGSARVIVAAINQVLAGRAGSGSGR
Ga0242653_10883792	3300022712	Soil	ANPSSPVAQAIDGSARVIVAAINQVLAGRAGSGSGQ
Ga0242675_10776982	3300022718	Soil	QVLAGLSATQIASQLGNPSSPVAQAIDGSAQVIIAAINQVLHDKTAHS
Ga0233357_10102131	3300023056	Soil	QLRDTSSPVAQAIDGSANVIIAAINQILHRAPAGPA
Ga0247676_10165551	3300024249	Soil	QIAAQLRNPSSPVAQAIDGSAKVIVAAINQVLHDQAGQG
Ga0247666_10582362	3300024323	Soil	YVIAGSQYSPQVLAGLSAAQIAAQLRDPSSPVARAIDASAQVIINHINQVLRDRAAHNQA
Ga0247668_10127201	3300024331	Soil	AQIAAQLRNPSSPVAQAIDGSAKVIVAAINQVLHDQAGQG
Ga0207692_109889461	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	QLRNPSSPVAQAIDGSAKVIITAINQVLHDQASRG
Ga0207652_104389002	3300025921	Corn Rhizosphere	AQLRNPSSPVAQAIDGSAKVIVAAINQVLHDQAGQG
Ga0207700_114106122	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LSATQITADLRDPSSPVAQAIDGSANVIIAAINQVLHHPASQG
Ga0207700_117754302	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	AGLSATQIAADLRDPSSPVAQAIDGSANVIIAAINQILHDQASQG
Ga0207664_117705851	3300025929	Agricultural Soil	AAQIAAQLRDPSSPVAQAIDSSAQVIINQINQVLRDRAGQSRA
Ga0207664_117985812	3300025929	Agricultural Soil	RDPSSPVARAIDASAQVIINHINQVLRDRAAQNQA
Ga0207644_111789311	3300025931	Switchgrass Rhizosphere	QVLAGLSAGQIASQLRNPSSPVAKAIDGSAKVIIAAIDQVLHEHPAH
Ga0207639_113438282	3300026041	Corn Rhizosphere	AQLRDPSSPVARAIDASAQVIINHINQVLRDRAAHNQA
Ga0209470_12169641	3300026324	Soil	GLSAAQIAAQLRNPSSPVAQAIDGSAKVIITAINQVLHDQASHG
Ga0209116_11515402	3300027590	Forest Soil	PQVLAGLSAAQIASQLTDPSSPVAQAIDGSAQVIITAIDQVLHGGAGA
Ga0208324_10646701	3300027604	Peatlands Soil	QYNPQVLAGLSAAQIASQLSNPASPVVQAIDGSAQVIVAAIDQVLHDKTAQQPATGVSGG
Ga0209330_11525883	3300027619	Forest Soil	QILAGLSAAQIASQLRNPSSPVAQAIDGSARIIVTAIDQVLHGTPSGAGHS
Ga0209178_10623522	3300027725	Agricultural Soil	AAQLRDPSSPVAQAIDASAQVIINQINQVLRDRANQSQA
Ga0209073_101479602	3300027765	Agricultural Soil	AADLRDPSSPVAQAIDGSANVIIAAINQVLHDQASQG
Ga0209517_100729474	3300027854	Peatlands Soil	VQGLSAAQIAGQLSNPSSPVAKAIDGSASVIIAAIDQILHDTAARS
Ga0209693_101289802	3300027855	Soil	QLSNPASPVAAAIDGAAQVIVAAINQVLHDQAASNTQ
Ga0209166_103213481	3300027857	Surface Soil	IASQLRNPASPVAQAIDGSAKVIIAAIDNVLHLRAPR
Ga0209167_103182671	3300027867	Surface Soil	YNPQILAGLSAAQIASQLANPSSQVAQAIDGSAQVIITAIDQVLHDKPALRAARAGA
Ga0209167_106580481	3300027867	Surface Soil	DPQVLAGLSARQIASQLADPSSPVAQAVDASAQVIIAAIDHVLGGHAAGSPA
Ga0209169_100729674	3300027879	Soil	QVLAGLSAVQIASQLSNPASPVAAAIDGAAQVIVAAINQVLHDQAASNTQ
Ga0209415_105186451	3300027905	Peatlands Soil	QVLAGLSAAQIASQLSNPASPVAQAIDGSAQVIVAAIDQVLHDKTAQQPATGVSGG
Ga0302233_104013932	3300028746	Palsa	LAGLSTAQIASQLRNTSSPVAKAIDGSASVIIAAISHVLHNQTAGR
Ga0308309_103594571	3300028906	Soil	SQLSNPSSRVAQAVDGSAKVIITAIGQVLHDQAARS
Ga0302184_100606091	3300030490	Palsa	QYDPRVLAGLSAAQIASQLSNPSSPVAQAVDGSAKVIITAIGQVLHDQAARS
Ga0302183_100638931	3300030509	Palsa	YDPRVLAGLSAAQIASQLSNPSSPVAQAVDGSAKVIITAIDQILHDQAARS
Ga0311357_102333131	3300030524	Palsa	PQVLAGLSAAQIASQLSNPASLVARAIDGSAQVIVAAIDQVLHDKTAHS
Ga0302308_108588621	3300031027	Palsa	VLAGLSAAQIASQLSNPSSPVAQAVDGSAKVIITAIDQILHDQAARS
Ga0302325_102117951	3300031234	Palsa	QVLAGLSAAQIASQLTDPSSPVAQAIDGSAQVIITAIDQVLHGQRAAGAGA
Ga0307475_104020911	3300031754	Hardwood Forest Soil	YNPQVLAGLSAAQIASQLAIPSSPVAQAIDGAAKLIIAAIDQVLHAGAGHG
Ga0318554_107967341	3300031765	Soil	YNPQVLAGLSAAQIASQLSNPSSPVAQAIDAAAKVIITAIDQVLHETSSRSS
Ga0318543_104980361	3300031777	Soil	AGQLSNPSSPVAEAVDGAARVIVAAIDQALHAKAAGT
Ga0318557_102325431	3300031795	Soil	QIAAQLRDPASPVAQAIDGAAEVIITAINQALHDQA
Ga0307473_107662572	3300031820	Hardwood Forest Soil	LRDPSSPVGRAIDASAQVIINHINQVLRDRAAHNQA
Ga0318551_104131201	3300031896	Soil	AGLSAAQIAAQLRDPSSPVAQAIDGSAQVIIAAINQVVHDQTARG
Ga0306921_120149283	3300031912	Soil	QLSNPSSPVAEAVDGAARVIVAAIDQALHAQAAGT
Ga0310913_104820783	3300031945	Soil	GLSAAQIAGQLSNPSSPVAEAVDGAARVIVAAIDQALHAQAAGT
Ga0318562_107549581	3300032008	Soil	LALRNPSSPVAQAIDGSAQAIVAAINQVLHNRAGQS
Ga0318513_101831831	3300032065	Soil	PQVLAGLSAAQIANQLSNPFSPVAQAIDGSANVIIAAIDQVLQEDLSHG
Ga0318524_104884382	3300032067	Soil	VLAGLSAAQIASQLSNPSSPVAHAIDTAAKVIIVAIDQVLHDTSSRSS
Ga0306924_116568161	3300032076	Soil	QYNPQVLAGLSAAQIAAQLRDPASPVAQAIDGAAEVIITAINQALHDQA
Ga0311301_102001745	3300032160	Peatlands Soil	VLAGLSAAQIASQLSHPSSPVAQAIDGSAQVIVTAIDQVLHDKTAPQLATGGSGG
Ga0311301_109436572	3300032160	Peatlands Soil	QYNPQVLAGLSAAQIASQLSDPASPVAQDIDGSAQVIIAAIDQVLGVT
Ga0307470_100895823	3300032174	Hardwood Forest Soil	AGLSAAQIAAQLRNPSSPVAQAIDGSAKVIVAAINQVLHDQAGQG
Ga0307471_1025288641	3300032180	Hardwood Forest Soil	AGQIASQLRNPSSPVAQAIDGSARIIITAINQVLHRAPAGRG
Ga0335085_122241781	3300032770	Soil	QVLAGLSAAQIAAQLRNPSSPVAQAIDGSAKVIITAINQVLHDQPAHG
Ga0335082_104758312	3300032782	Soil	AGLSATQIAADLRDPSSPVAQAIDGSANMIIAAINQVLHHPASQG
Ga0335080_106688163	3300032828	Soil	AQLRNPSSPVAQAIDGSAQAIVAAINQVLHNQAGQS
Ga0335069_112537362	3300032893	Soil	QIAADLRDPSSPVAQAIDGSANVIIAAINQVLHDPASQG
Ga0335071_109723441	3300032897	Soil	AQIAAQLRNPSSPVAQAIDGSAQAIVAAINQVLHNQAGQS
Ga0335083_109809652	3300032954	Soil	DLRDPSSPVAQAIDGSANVIIAAINQILHDQASQG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059375

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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