Metagenome / Metatranscriptome Family F059385

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059385
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	64 residues
Representative Sequence	MKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG
Number of Associated Samples	107
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.43 %
% of genes near scaffold ends (potentially truncated)	22.39 %
% of genes from short scaffolds (< 2000 bps)	82.84 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.403 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (12.687 % of family members)
Environment Ontology (ENVO)	Unclassified (54.478 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.716 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.58% β-sheet: 24.73% Coil/Unstructured: 52.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF13180	PDZ_2	5.22
PF00561	Abhydrolase_1	5.22
PF13360	PQQ_2	4.48
PF13147	Obsolete Pfam Family	3.73
PF13442	Cytochrome_CBB3	3.73
PF00190	Cupin_1	2.24
PF01979	Amidohydro_1	2.24
PF12695	Abhydrolase_5	2.24
PF03989	DNA_gyraseA_C	2.24
PF01522	Polysacc_deac_1	1.49
PF05899	Cupin_3	1.49
PF03992	ABM	1.49
PF07995	GSDH	1.49
PF01594	AI-2E_transport	1.49
PF07883	Cupin_2	1.49
PF00072	Response_reg	0.75
PF10517	DM13	0.75
PF13570	PQQ_3	0.75
PF13620	CarboxypepD_reg	0.75
PF03544	TonB_C	0.75
PF01165	Ribosomal_S21	0.75
PF02371	Transposase_20	0.75
PF07238	PilZ	0.75
PF01694	Rhomboid	0.75
PF01011	PQQ	0.75
PF08534	Redoxin	0.75
PF07853	DUF1648	0.75
PF07087	DUF1353	0.75
PF00069	Pkinase	0.75
PF07690	MFS_1	0.75
PF07366	SnoaL	0.75
PF13490	zf-HC2	0.75
PF01263	Aldose_epim	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.99
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	2.24
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.49
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	1.49
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	1.49
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	0.75
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.75
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.75
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	0.75
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.40 %
Unclassified	root	N/A	30.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.40 %
Unclassified	root	N/A	30.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.40 %
Unclassified	root	N/A	30.60 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	41.79 %
Unclassified	root	N/A	30.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.48 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	2.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.60 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	17.16 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.19 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.24 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.60 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	14.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.19 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.24 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.19 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	10.45 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	2.24 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.24 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.49 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.19 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	10.45 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2.24 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.24 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	1.49 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.19 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	10.45 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.24 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.49 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1.49 %
unclassified Candidatus Solibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.19 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	10.45 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.24 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	1.49 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.49 %
Candidatus Solibacter sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101410762	All Organisms → cellular organisms → Bacteria → Acidobacteria	1086	Open in IMG/M
3300002245\|JGIcombinedJ26739_100588667	Not Available	989	Open in IMG/M
3300004092\|Ga0062389_101694720	Not Available	813	Open in IMG/M
3300005327\|Ga0070658_10918804	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300005328\|Ga0070676_11274671	Not Available	560	Open in IMG/M
3300005335\|Ga0070666_11144814	Not Available	579	Open in IMG/M
3300005338\|Ga0068868_100008457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7369	Open in IMG/M
3300005339\|Ga0070660_100451612	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300005355\|Ga0070671_100340629	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300005366\|Ga0070659_100346690	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300005367\|Ga0070667_100464630	All Organisms → cellular organisms → Bacteria → Acidobacteria	1157	Open in IMG/M
3300005439\|Ga0070711_101236025	Not Available	647	Open in IMG/M
3300005533\|Ga0070734_10010345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6931	Open in IMG/M
3300005534\|Ga0070735_10321181	All Organisms → cellular organisms → Bacteria → Acidobacteria	931	Open in IMG/M
3300005537\|Ga0070730_10688388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300005538\|Ga0070731_10860950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300005539\|Ga0068853_100340179	All Organisms → cellular organisms → Bacteria → Proteobacteria	1394	Open in IMG/M
3300005541\|Ga0070733_10013460	All Organisms → cellular organisms → Bacteria	5131	Open in IMG/M
3300005541\|Ga0070733_10173050	All Organisms → cellular organisms → Bacteria → Acidobacteria	1407	Open in IMG/M
3300005616\|Ga0068852_100238605	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300005617\|Ga0068859_101931804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300005836\|Ga0074470_11160366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1186	Open in IMG/M
3300005842\|Ga0068858_100043170	All Organisms → cellular organisms → Bacteria	4180	Open in IMG/M
3300005843\|Ga0068860_100479957	Not Available	1239	Open in IMG/M
3300006046\|Ga0066652_100739878	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	938	Open in IMG/M
3300006046\|Ga0066652_101563982	Not Available	608	Open in IMG/M
3300006057\|Ga0075026_100689024	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300006059\|Ga0075017_100149630	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300006162\|Ga0075030_101525479	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300006163\|Ga0070715_10764862	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	583	Open in IMG/M
3300006173\|Ga0070716_101361556	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	576	Open in IMG/M
3300006237\|Ga0097621_100038433	All Organisms → cellular organisms → Bacteria	3841	Open in IMG/M
3300006237\|Ga0097621_100371825	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	1275	Open in IMG/M
3300006237\|Ga0097621_100497586	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300006354\|Ga0075021_10843060	Not Available	593	Open in IMG/M
3300006358\|Ga0068871_101258228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300007076\|Ga0075435_101661929	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300007788\|Ga0099795_10425541	Not Available	607	Open in IMG/M
3300009088\|Ga0099830_10471117	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300009089\|Ga0099828_10307921	All Organisms → cellular organisms → Bacteria → Acidobacteria	1425	Open in IMG/M
3300009089\|Ga0099828_11936115	Not Available	517	Open in IMG/M
3300009098\|Ga0105245_10062135	All Organisms → cellular organisms → Bacteria → Proteobacteria	3369	Open in IMG/M
3300009098\|Ga0105245_10078858	All Organisms → cellular organisms → Bacteria	3006	Open in IMG/M
3300009098\|Ga0105245_10224532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1814	Open in IMG/M
3300009101\|Ga0105247_10166876	All Organisms → cellular organisms → Bacteria → Acidobacteria	1461	Open in IMG/M
3300009101\|Ga0105247_10766926	Not Available	733	Open in IMG/M
3300009101\|Ga0105247_11220231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300009143\|Ga0099792_11144274	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	526	Open in IMG/M
3300009148\|Ga0105243_10127081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2158	Open in IMG/M
3300009162\|Ga0075423_11643371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300009174\|Ga0105241_10432095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1161	Open in IMG/M
3300009177\|Ga0105248_10050221	All Organisms → cellular organisms → Bacteria	4677	Open in IMG/M
3300009177\|Ga0105248_11569010	Not Available	746	Open in IMG/M
3300010341\|Ga0074045_10939165	Not Available	545	Open in IMG/M
3300010371\|Ga0134125_12848730	Not Available	525	Open in IMG/M
3300010375\|Ga0105239_11164957	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	888	Open in IMG/M
3300010379\|Ga0136449_100147026	All Organisms → cellular organisms → Bacteria	4638	Open in IMG/M
3300010379\|Ga0136449_100203018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3766	Open in IMG/M
3300010399\|Ga0134127_13119328	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300011120\|Ga0150983_11145159	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	667	Open in IMG/M
3300011269\|Ga0137392_10303670	All Organisms → cellular organisms → Bacteria → Acidobacteria	1319	Open in IMG/M
3300011270\|Ga0137391_10660678	Not Available	871	Open in IMG/M
3300011271\|Ga0137393_10284832	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1405	Open in IMG/M
3300011271\|Ga0137393_11314202	Not Available	612	Open in IMG/M
3300012096\|Ga0137389_10099828	All Organisms → cellular organisms → Bacteria	2305	Open in IMG/M
3300012189\|Ga0137388_10363093	All Organisms → cellular organisms → Bacteria → Acidobacteria	1337	Open in IMG/M
3300012189\|Ga0137388_11610659	Not Available	585	Open in IMG/M
3300012363\|Ga0137390_11231617	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300012917\|Ga0137395_11156476	Not Available	545	Open in IMG/M
3300012930\|Ga0137407_11278861	Not Available	697	Open in IMG/M
3300013297\|Ga0157378_10361992	Not Available	1420	Open in IMG/M
3300013297\|Ga0157378_10412636	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300013770\|Ga0120123_1181068	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	507	Open in IMG/M
3300014501\|Ga0182024_10066908	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5484	Open in IMG/M
3300014745\|Ga0157377_11425559	Not Available	547	Open in IMG/M
3300015063\|Ga0167649_100516	All Organisms → cellular organisms → Bacteria	5744	Open in IMG/M
3300015195\|Ga0167658_1019107	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300015371\|Ga0132258_11909362	All Organisms → cellular organisms → Bacteria → Acidobacteria	1495	Open in IMG/M
3300020579\|Ga0210407_10696332	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300020580\|Ga0210403_10370017	All Organisms → cellular organisms → Bacteria → Acidobacteria	1172	Open in IMG/M
3300021171\|Ga0210405_10250227	All Organisms → cellular organisms → Bacteria → Acidobacteria	1402	Open in IMG/M
3300021178\|Ga0210408_10100427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2274	Open in IMG/M
3300021432\|Ga0210384_10180013	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1900	Open in IMG/M
3300021432\|Ga0210384_10366893	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1297	Open in IMG/M
3300021432\|Ga0210384_10535130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1054	Open in IMG/M
3300025321\|Ga0207656_10086932	Not Available	1413	Open in IMG/M
3300025900\|Ga0207710_10380427	Not Available	722	Open in IMG/M
3300025903\|Ga0207680_10815515	Not Available	669	Open in IMG/M
3300025906\|Ga0207699_11140351	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300025911\|Ga0207654_10098252	All Organisms → cellular organisms → Bacteria	1798	Open in IMG/M
3300025911\|Ga0207654_10104172	All Organisms → cellular organisms → Bacteria	1753	Open in IMG/M
3300025911\|Ga0207654_10260672	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1165	Open in IMG/M
3300025911\|Ga0207654_10526810	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300025913\|Ga0207695_10802408	Not Available	821	Open in IMG/M
3300025916\|Ga0207663_11250849	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	598	Open in IMG/M
3300025927\|Ga0207687_10032261	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	3546	Open in IMG/M
3300025927\|Ga0207687_10292658	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300025927\|Ga0207687_10361120	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300025931\|Ga0207644_10337202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1222	Open in IMG/M
3300025934\|Ga0207686_10133113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	1708	Open in IMG/M
3300025935\|Ga0207709_10973558	Not Available	692	Open in IMG/M
3300025941\|Ga0207711_10495271	Not Available	1139	Open in IMG/M
3300025941\|Ga0207711_10656627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300025941\|Ga0207711_11734154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300025986\|Ga0207658_10234437	All Organisms → cellular organisms → Bacteria → Acidobacteria	1551	Open in IMG/M
3300026035\|Ga0207703_10488589	Not Available	1154	Open in IMG/M
3300026078\|Ga0207702_10151339	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300027565\|Ga0209219_1010391	Not Available	2145	Open in IMG/M
3300027674\|Ga0209118_1056920	All Organisms → cellular organisms → Bacteria → Acidobacteria	1146	Open in IMG/M
3300027826\|Ga0209060_10011446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5185	Open in IMG/M
3300027867\|Ga0209167_10008407	All Organisms → cellular organisms → Bacteria → Proteobacteria	4951	Open in IMG/M
3300027882\|Ga0209590_10601041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	708	Open in IMG/M
3300027894\|Ga0209068_10549721	Not Available	669	Open in IMG/M
3300027903\|Ga0209488_10230908	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300029636\|Ga0222749_10462103	Not Available	681	Open in IMG/M
3300031057\|Ga0170834_100330964	Not Available	810	Open in IMG/M
3300031128\|Ga0170823_16198407	Not Available	874	Open in IMG/M
3300031231\|Ga0170824_109215632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3736	Open in IMG/M
3300031231\|Ga0170824_112268799	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	744	Open in IMG/M
3300031231\|Ga0170824_124111172	Not Available	670	Open in IMG/M
3300031469\|Ga0170819_17793063	Not Available	590	Open in IMG/M
3300031708\|Ga0310686_115904284	All Organisms → cellular organisms → Bacteria	1863	Open in IMG/M
3300031718\|Ga0307474_10222350	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1441	Open in IMG/M
3300031720\|Ga0307469_11378019	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	672	Open in IMG/M
3300031740\|Ga0307468_101506995	Not Available	624	Open in IMG/M
3300031962\|Ga0307479_11570132	Not Available	614	Open in IMG/M
3300032160\|Ga0311301_11218497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	962	Open in IMG/M
3300032160\|Ga0311301_11853324	Not Available	714	Open in IMG/M
3300032174\|Ga0307470_10244207	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1181	Open in IMG/M
3300032174\|Ga0307470_10428784	Not Available	944	Open in IMG/M
3300032205\|Ga0307472_100038915	All Organisms → cellular organisms → Bacteria → Proteobacteria	2850	Open in IMG/M
3300032770\|Ga0335085_10126300	Not Available	3254	Open in IMG/M
3300032828\|Ga0335080_10318335	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300033480\|Ga0316620_11838292	Not Available	601	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.70%
Host-Associated	Host-Associated	40.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.48%
Plants	Host-Associated → Plants	40.30%
Aquatic	Environmental → Aquatic	5.22%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.46%
Sediment	Environmental → Aquatic → Sediment	4.48%
Roots	Host-Associated → Plants → Roots	2.99%
Freshwater	Environmental → Aquatic → Freshwater	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.46%
Loam	Environmental → Terrestrial → Soil → Loam	6.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.73%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.99%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.99%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.24%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.75%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	6.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.22%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.73%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.24%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.24%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.49%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.49%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.49%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.75%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.75%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.75%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015063	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3b, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1014107622	3300000364	Soil	MKISKGTVSGEVEYIQNEDGSWSFRLTLDDDPVPIESDWTFASRELAEEHVNYTLDSAALRIAEG*
JGIcombinedJ26739_1005886674	3300002245	Forest Soil	MRIGNGEVEYTEHEDGTWSFKLMLEDDPVPIESMGNFPTKELAEEQVNYELEAASLRKAEG*
Ga0062389_1016947202	3300004092	Bog Forest Soil	MKISKGTVKGEVEYTQHGDGLWSFRLTRDDDPVPMESDSNFESNELAEEQLNYVMESAALRIAEG*
Ga0070658_109188041	3300005327	Corn Rhizosphere	MKITKGSVTGDVEYTQNEDGSWSFLLTLDDDPVPIESDWTFPSRELAEEQVNYTLDSIALRIAEG*
Ga0070676_112746712	3300005328	Miscanthus Rhizosphere	MKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0070666_111448141	3300005335	Switchgrass Rhizosphere	GTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG
Ga0068868_1000084574	3300005338	Miscanthus Rhizosphere	MKITKGSVTGDVEYTQNEDGSWSFLLTLDDNPVPIESDWTFPSRELAEEQVNYTLDSIALRIAEG*
Ga0070660_1004516122	3300005339	Corn Rhizosphere	MKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVN
Ga0070671_1003406292	3300005355	Switchgrass Rhizosphere	MKISKSTVSGDVEYTQHEDGSWSYRLTLDDDPVPIESDWNFESKELAEEQVDFVLDSAALRIAEG*
Ga0070659_1003466902	3300005366	Corn Rhizosphere	MKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEV*
Ga0070667_1004646301	3300005367	Switchgrass Rhizosphere	MRINKGTVFGEVEYTQNEDGSWSFRLELDDDPIPIESDWTFPSKELAEEQMNYTLDSAALRIAEG*
Ga0070711_1012360252	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKISKSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYLLDSAVMRIAEG*
Ga0070734_100103454	3300005533	Surface Soil	MRITRGTASGDVEYTQNEDGSWSFRLAMDNDPVPIEGSDFASKELAEEQVNYALESAALRIAEG*
Ga0070735_103211812	3300005534	Surface Soil	MRINKGTVFGEVEYTQNEDGSWSFRLTLDGDPIPIESDWTFASKELAEEQVNYT
Ga0070730_106883882	3300005537	Surface Soil	MRINKGTVFGEVEYTQNEDGSWSFRLAVDDDPIPIESDWTFPSKELAEEQVNY
Ga0070731_108609502	3300005538	Surface Soil	YIQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAVLRIAEG*
Ga0068853_1003401792	3300005539	Corn Rhizosphere	MKISNGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0070733_100134603	3300005541	Surface Soil	MKISKGTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYTLDSAALRIAEG*
Ga0070733_101730503	3300005541	Surface Soil	MRINKGTVFGEVEYTQNEDGSWSFQLTLDDDLIPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0068852_1002386052	3300005616	Corn Rhizosphere	MKISKGAVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0068859_1019318042	3300005617	Switchgrass Rhizosphere	MRINKGTVFGEIEYTQNEDGSWSFRLELDDDPIPIESDWTFPSKELAEEQVNYTLDSAA
Ga0074470_111603663	3300005836	Sediment (Intertidal)	MRISKSNQSGDVEYTQHENGSWSFRLTLDDDPVPIENWDFPSKELAEEQVNYTLESAALRIAEG*
Ga0068858_1000431705	3300005842	Switchgrass Rhizosphere	MRINKGTVFGEVEYTQNEDGSWSFRLELDDDPIPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0068860_1004799572	3300005843	Switchgrass Rhizosphere	MKISKGTVFGEVEYIQNEDASWSFRLMLDDDPIVIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0066652_1007398782	3300006046	Soil	MKISKGTVFGEVEYTQNEDRSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG*
Ga0066652_1015639822	3300006046	Soil	MKISKGAVSGEVEYVQNEDGSWSFRLTLDDDPVPIESDWTFPSRELAEEQVNYTLDSAALRIAEG*
Ga0075026_1006890242	3300006057	Watersheds	MKVNKGTIFGEVEYIQNEDGSWSFRLTLDDDPLPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0075017_1001496302	3300006059	Watersheds	MKISKGAIFGEVEYTQNDDGSWSFRLTLDDDPIPIESDWTFPSRELAEEQVNYTLESAALRIAEG*
Ga0075030_1015254792	3300006162	Watersheds	MKISKGAIFGEVEYTQNDDGSWSFRLTLDDDPIPIESDWTFPSKELAEEQVNYTLESAALRIAEG*
Ga0070715_107648622	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKISKGTVFGEVEYTQHEDRSWSFRLTLDDDPVPIESDWNFPSKELAEEQVHYTLDSAALRIAEG*
Ga0070716_1013615562	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKISKSTVSGDVEYTQHEDGSWSFRLILDDDPVPIESDWKFPSKELAEEQVNYLLDSAVMRIAEG*
Ga0097621_1000384335	3300006237	Miscanthus Rhizosphere	MKISKGTVFGEVEYIQNEDASWSFRLMLDDDPIAIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0097621_1003718252	3300006237	Miscanthus Rhizosphere	MKISKGMVSGEIEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEQVNYELDAAALRIAEG*
Ga0097621_1004975862	3300006237	Miscanthus Rhizosphere	MRINKGTVFGEVEYTQHEDGSWSFRLALDDDPIPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0075021_108430601	3300006354	Watersheds	MKGIVKVSKGTIFGEVEYTQNEDGSWSFRLMLDDDPIPIESDWTFPSKELAEEQVNYTLESAALRIAEG*
Ga0068871_1012582282	3300006358	Miscanthus Rhizosphere	MRINKGTVFGEVEYTQHEDGSWSFRLALDDDPIPIESDWTFPSKELAEQQVNYTLDSAALRIAEG*
Ga0075435_1016619291	3300007076	Populus Rhizosphere	MKISKGNVFGEVEYTQNKDGSWSFQLTLDEDPVPIESDWTFPSKELAEEQVNYMLDSAALRIAEG*
Ga0099795_104255412	3300007788	Vadose Zone Soil	MKISKNTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWNFPSKELAEEQVHYTLDSAALRIAEG*
Ga0099830_104711172	3300009088	Vadose Zone Soil	KISRSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKSPSKELAEEQVNYLLDSAVMRIAEG*
Ga0099828_103079212	3300009089	Vadose Zone Soil	MKISRSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKSPSKELAEEQVNYLLDSAVLRIAEG*
Ga0099828_119361152	3300009089	Vadose Zone Soil	GDVEYTQHEDGTWSFKLTLDGDPVPIESDWNFETKELAEEQVKYTLDSAALRKAEG*
Ga0105245_100621353	3300009098	Miscanthus Rhizosphere	MKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEQVNYALDSAALRIAEG*
Ga0105245_100788581	3300009098	Miscanthus Rhizosphere	MRINKGTVFGEVEYTQNEDGSWSFRLELDDDPIPIESDWTFPSKELAEEQVNYT
Ga0105245_102245322	3300009098	Miscanthus Rhizosphere	MKISKGKVFGEVEYTQNEDGSWSFRLTLDDDPISIESDWTFPSKELAEEQVNYTLDSVALRIAEG*
Ga0105247_101668763	3300009101	Switchgrass Rhizosphere	MRINKGTVFGEVEYTQNEDGSWSFRLTLDDDPISIESDWTFPSKELAEEQVNYTLDSVALRIAEG*
Ga0105247_107669261	3300009101	Switchgrass Rhizosphere	MKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEHVNYALDSAALRIAEG*
Ga0105247_112202312	3300009101	Switchgrass Rhizosphere	MKISKSTVSGDVEYTQHEDGSWSYRLTLDDDPVPIESDWNFESKELAEEQVDFVLDSAALRI
Ga0099792_111442741	3300009143	Vadose Zone Soil	GDVEYTQHEDGSWSFRLTLDDDPVPIECDWNFPSKELAEEQVHYTLDSAALRIAEG*
Ga0105243_101270813	3300009148	Miscanthus Rhizosphere	MKISKGTVLGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG*
Ga0075423_116433712	3300009162	Populus Rhizosphere	MKISKGTVFAEVEYIQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0105241_104320953	3300009174	Corn Rhizosphere	MKISKGAVSGEVEYIQNEDGSWSFRLTLDDDPVPIENDWTFPSRELAEEHVNYTLDSAALRIAEG*
Ga0105248_100502212	3300009177	Switchgrass Rhizosphere	MRINKGTVFGEVEYTQNEDGSWSFRLELDDDPIPIESDWTFPSKELAEEQVNYTLDSAALRIEEG*
Ga0105248_115690101	3300009177	Switchgrass Rhizosphere	YTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0074045_109391651	3300010341	Bog Forest Soil	MKISKGTVFGEVEYAQNEDGSWSFRLTLEDDPVPIESDWTFPSKELAEEQVNYTLDSFALRIAEG*
Ga0134125_128487301	3300010371	Terrestrial Soil	MKISKGTVLGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEAQVNYTLDSVALRIAEG*
Ga0105239_111649572	3300010375	Corn Rhizosphere	MKISRSTVSGAVEYTQHQDGSWSFRLTLDDDPVPIESDWNFPTKELAEEQVNYVLDSAAMRIAEG*
Ga0136449_1001470269	3300010379	Peatlands Soil	MRISNGTVSGDVEYVQHKDGTWSFRLTLDDDPISIESDWNLATKELAQEQVNYAMDSAALRKAEG*
Ga0136449_1002030181	3300010379	Peatlands Soil	PMNISNGSVSGDVEYTEHEDGTWSFVLTLDGDPVPIESDWNFATKELAEEQVTYTLESAALRKAEG*
Ga0134127_131193281	3300010399	Terrestrial Soil	MKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNY
Ga0150983_111451593	3300011120	Forest Soil	SGDVEYVQHEDGTWSFRLTLEDDPVPVESDWNFTTKELAEEQVKYTLDSAALRKAEG*
Ga0137392_103036702	3300011269	Vadose Zone Soil	MKIRKSTVSGDVECTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYLLDSAVLRIAEG*
Ga0137391_106606781	3300011270	Vadose Zone Soil	MKISKSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKSPSKELAEEQVNYLLDSAVMRIAEG*
Ga0137393_102848321	3300011271	Vadose Zone Soil	MKISKSIVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYLLDSAVLRIAEG*
Ga0137393_113142022	3300011271	Vadose Zone Soil	MKPMNIDNGTVYGDVEYTLHEDGTWSFKLTLEGDPVPIESDWNFATKELAEEQVKYTLDSAALRKAEG*
Ga0137389_100998284	3300012096	Vadose Zone Soil	MKISRSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYLLDSAVLRIAEG*
Ga0137388_103630932	3300012189	Vadose Zone Soil	MTISRSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYLLDSAVLRIAEG*
Ga0137388_116106593	3300012189	Vadose Zone Soil	PMNIDNGSVSGDVEYTQHEDGTWAFKLTLDGDPVPIESDWNFETKELAEEQVKYTLDSAALRKAEG*
Ga0137390_112316171	3300012363	Vadose Zone Soil	MKISKSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYLLDSAVLRIAEG*
Ga0137395_111564762	3300012917	Vadose Zone Soil	MKISKSTVSGDVECTQHEDGSWSFRLTLDDDPVPAESDWKFPCEELAEEQVNYTLDSAALRIAEG*
Ga0137407_112788612	3300012930	Vadose Zone Soil	MKISKSTVSGDVEYTQHEDGSWSYRLTLDDDPVPIESDWNFESKELAEEQVDFALDSAALRIAEG*
Ga0157378_103619922	3300013297	Miscanthus Rhizosphere	VEYTQNEDGSWSFRLELDDDPIPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0157378_104126362	3300013297	Miscanthus Rhizosphere	MKISKGNVCGDVEYTQHQDGSWSFRLTLDGDPVPIESDWTFTSRELAEEQVNYTLDSAALRIAEG*
Ga0120123_11810681	3300013770	Permafrost	RQSVLDSLLGRPDPMKISKGTVFGEVEYTQNEDGSWSFRLTLDEDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG*
Ga0182024_1006690810	3300014501	Permafrost	MRISDGAVSGDVEYVQHEDGTWSFRLTLDDDPISIESDWNLATQGLAEEQVNYAMDSAALRKAEG*
Ga0157377_114255591	3300014745	Miscanthus Rhizosphere	MKITKGSVTGDVEYTQNEDGSWSFLLTLDDDPVPIESDWTFPSRELAEEQVNYTLDSIA
Ga0167649_10051610	3300015063	Glacier Forefield Soil	MKISKGTVCGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG*
Ga0167658_10191072	3300015195	Glacier Forefield Soil	MKISRSTVSGDVEYIQHEDGSWSFRLTLDDDPVPIESDWNFPSKELAEEQVNYVLDSAALRIAEG*
Ga0132258_119093621	3300015371	Arabidopsis Rhizosphere	MRINKGTVFGEVEYTQNEDGSWAFRLELDDDPIPIESDWTFPSKELAEEQVNYTLDSAALRIAEG*
Ga0210407_106963322	3300020579	Soil	MRISKGTVFGEVEYTQNEDGSWSFWLTLDDDPIPIESDWTFPSKELAEEQVRYTLDSAALRIAEG
Ga0210403_103700171	3300020580	Soil	MRISKGTVFGEVEYTQNEDGSWSFRLTLDDDPIPIESDWTFPSKEQAEEQVNYTLDSAALRIAEG
Ga0210405_102502272	3300021171	Soil	MKISKSMVSGDVEYTQHEDGSWSFRLTLDGDPVPIESDWNFPSKELAEEQVNYLLDSAVLRIGEG
Ga0210408_101004273	3300021178	Soil	MRISKGMVFGEVEYTQNEDGSWSFRLTLDDDPIPIESDWTFPSKELAEEQVRYTLDSAALRIAEG
Ga0210384_101800132	3300021432	Soil	MKISKSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSQELAEEQVNYLLDSAVMRIAEG
Ga0210384_103668932	3300021432	Soil	MKISKGAVSGEVEYIQNEDGSWSFWLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG
Ga0210384_105351302	3300021432	Soil	MRISKSTVSGDVEYIQHEEGSWSFRLTLDDDPVPIESDWKFPSRELAEEQVNYLLDSAVLRIAEG
Ga0207656_100869322	3300025321	Corn Rhizosphere	MKITKGSVTGDVEYTQNEDGSWSFLLTLDDNPVPIESDWTFPSRELAEEQVNYTLDSIALRIAEG
Ga0207710_103804272	3300025900	Switchgrass Rhizosphere	MKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEHVNYALDSAALRIAEG
Ga0207680_108155151	3300025903	Switchgrass Rhizosphere	MKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG
Ga0207699_111403512	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKISKGTVFGEVEYTQHEDRSWSFRLTLDDDPVPIESDWTFLSKELVEEQVNYTLDSVAL
Ga0207654_100982522	3300025911	Corn Rhizosphere	MKISKGTVFGEVEYIQNEDASWSFRLMLDDDPIAIESDWTFPSKELAEEQVNYTLDSAALRIAEG
Ga0207654_101041721	3300025911	Corn Rhizosphere	MKISKGTVLGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG
Ga0207654_102606721	3300025911	Corn Rhizosphere	MKISKGAVSGEVEYIQNEDGSWSFRLTLDDDPVPIENDWTFPSRELAEEHVNYTLDSAALRIAEG
Ga0207654_105268101	3300025911	Corn Rhizosphere	MRINKGTVFGEVEYTQHEDGSWSFRLALDDDPIPIESDWTFPSKELAEQQVNYTLDSAALRIAEG
Ga0207695_108024082	3300025913	Corn Rhizosphere	MKITKGSVTGDVEYTQNEDGSWSFLLTLDDDPVPIESDWTFPSRELAEEQVNYTLDSIALRIAEG
Ga0207663_112508491	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKISKGTVFGEVEYTQHEDRSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG
Ga0207687_100322612	3300025927	Miscanthus Rhizosphere	MKISKGKVFGEVEYTQNEDGSWSFRLTLDDDPISIESDWTFPSKELAEEQVNYTLDSVALRIAEG
Ga0207687_102926583	3300025927	Miscanthus Rhizosphere	MKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEQVNYALDSAALRIAEG
Ga0207687_103611203	3300025927	Miscanthus Rhizosphere	MKISKGNVCGDVEYTQHQDGSWSFRLTLDGDPVPIESDWTFTSRELAEEQVNYTLDSAALRIAEG
Ga0207644_103372022	3300025931	Switchgrass Rhizosphere	MKISKSTVSGDVEYTQHEDGSWSYRLTLDDDPVPIESDWNFESKELAEEQVDFVLDSAALRIAEG
Ga0207686_101331132	3300025934	Miscanthus Rhizosphere	MKISKGMVSGEIEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEQVNYELDAAALRIAEG
Ga0207709_109735581	3300025935	Miscanthus Rhizosphere	VKINKGMVSGEIEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEQVNYELDAAALRIAEG
Ga0207711_104952711	3300025941	Switchgrass Rhizosphere	YTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG
Ga0207711_106566271	3300025941	Switchgrass Rhizosphere	MRINKGTVFGEVEYTQNEDGSWSFRLELDDDPIPIESDWTFPSKELAEEQVNYTLDSAALRIEEG
Ga0207711_117341541	3300025941	Switchgrass Rhizosphere	MKISKSTVSGDVEYTQHEDGSWSYRLTLDDDPVPIESDWNFESKELAEEQVDFVLDS
Ga0207658_102344371	3300025986	Switchgrass Rhizosphere	MRINKGTVFGEVEYTQNEDGSWSFRLELDDDPIPIESDWTFPSKELAEEQVNYTLDSAALRIAEG
Ga0207703_104885893	3300026035	Switchgrass Rhizosphere	MKITKGSVTGDVEYTQNEDGSWSFLLTLDDDPVPIESDWTFPSRELAEEQVNYTLDSAALRIAEG
Ga0207702_101513392	3300026078	Corn Rhizosphere	MKISNGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSAALRIAEG
Ga0209219_10103913	3300027565	Forest Soil	MNISNGSVSGEVEYTQHEDGTWSFKLTLEGDPVSIESDWNFATRELAEEQVKYTLDSAALRIAEG
Ga0209118_10569202	3300027674	Forest Soil	MKISKSTVSGDVEYTQHENGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYLLDSAVLRIAEG
Ga0209060_100114462	3300027826	Surface Soil	MRITRGTASGDVEYTQNEDGSWSFRLAMDNDPVPIEGSDFASKELAEEQVNYALESAALRIAEG
Ga0209167_100084073	3300027867	Surface Soil	MKISKGTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYTLDSAALRIAEG
Ga0209590_106010412	3300027882	Vadose Zone Soil	MKISKSTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYLLDSAVMRIAEG
Ga0209068_105497212	3300027894	Watersheds	MKGIVKVSKGTIFGEVEYTQNEDGSWSFRLMLDDDPIPIESDWTFPSKELAEEQVNYTLESAALRIAEG
Ga0209488_102309083	3300027903	Vadose Zone Soil	MKISKNTVSGDVEYTQHEDGSWSFRLTLDDDPVPIECDWNFPSKELAEEQVHYTLDSAALRIAEG
Ga0222749_104621032	3300029636	Soil	MNIDNGSVSGEVEYTQHEDGTWSFKLTLDGDPVPIESDWNFETKELAEEQVKYTLDSAALRKAEG
Ga0170834_1003309641	3300031057	Forest Soil	AEDPMKISKGAVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEQVRYVLDSAALRIAEG
Ga0170823_161984073	3300031128	Forest Soil	EDPMKISKGAVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDWPFPSKELAEEQVRYVLDSAALRIAEG
Ga0170824_1092156325	3300031231	Forest Soil	VDVEYSQHEDGSWSFRLTLDDDPVPIESDWKFPSKELAEEQVNYTLDSAALRIAEG
Ga0170824_1122687992	3300031231	Forest Soil	MKISKGTVSGEVEYIQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYALDSAALRIAEG
Ga0170824_1241111721	3300031231	Forest Soil	MKISKGTVFGEVEYTQNEDGSWSFRLTLDDDPVPIESDCPFPSKELAEEQVNYALDSAALRIAE
Ga0170819_177930631	3300031469	Forest Soil	KSTVSGDVEYTQHEDGSWSYRLTLDDDPVPIESDWNFESKELAEEQVNYLLDSAVMRIAE
Ga0310686_1159042842	3300031708	Soil	MKISKGTVLGDVEYTQNDDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG
Ga0307474_102223502	3300031718	Hardwood Forest Soil	MRSAHIAASDRRALPMLLRLRPMNISNGSVSGEVEYTQHEDGTWSFTLTLDGDPVPIESDWNFATKELAEEQVNYTLDSAALRKAEG
Ga0307469_113780191	3300031720	Hardwood Forest Soil	SNGSVSGDVEYTQHEDGTWSFKLTLDEDPVPIESDWNFATKELAEEQVKYTLDSAALRKAEG
Ga0307468_1015069951	3300031740	Hardwood Forest Soil	MKISKNTVSGDVEYTQHEDGSWSFRLTLDDDPVPIESDWTFPSRELAEEQVNYTLDSAALRIAEG
Ga0307479_115701321	3300031962	Hardwood Forest Soil	MNIDNGSVSGDVEYSQHEDGTWSFKLTLDGDPVPIESDWNFETKELAEEQVKYTLDSAALRKAEG
Ga0311301_112184974	3300032160	Peatlands Soil	LLRLIPMNISNGSVSGDVEYTEHEDGTWSFVLTLDGDPVPIESDWNFATKELAEEQVTYTLESAALRKAEG
Ga0311301_118533242	3300032160	Peatlands Soil	MRISNGTVSGDVEYVQHKDGTWSFRLTLDDDPISIESDWNLATKELAQEQVNYAMDSAALRKAEG
Ga0307470_102442072	3300032174	Hardwood Forest Soil	MRIGKGTVLGEVEYTQNEDGAWSFRLTLDDDPVPIESDWTFPSRELAEEQVNYTLDAAALRIAEG
Ga0307470_104287841	3300032174	Hardwood Forest Soil	MRINKGTVFGEVEYTQNEDSSWSFRLALDDDPIPIESDWTFPSKELAEEQVNYTLDSAALRIAEG
Ga0307472_1000389153	3300032205	Hardwood Forest Soil	MKISKSTVSGDVEYTQHEDGSWSFRLTPDDDPVPIESDWKFSSKELAEEQVNYLLDSAVLRIAEG
Ga0335085_101263003	3300032770	Soil	MRISHGSLSGDVEYTQHEDGTWSFQLTLDGDPTPIESDWNFPSKELAEEQLNYTLESAALRRAEG
Ga0335080_103183351	3300032828	Soil	SLSGDVEYTQHEDGTWSFQLTLDGDPTPIESDWNFPSKELAEEQLNYTLESAALRRAEG
Ga0316620_118382921	3300033480	Soil	MKISKGTVFGEVEYAQNEDGSWSFRLTLDDDPVPIESDWTFPSKELAEEQVNYTLDSVALRIAEG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059385

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences