Metagenome Family F059742

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059742
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	44 residues
Representative Sequence	GVPVVSARRLPSMLRALPAVLGPERVAVLADQARVRFHAAA
Number of Associated Samples	82
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	16.54 %
% of genes near scaffold ends (potentially truncated)	84.21 %
% of genes from short scaffolds (< 2000 bps)	88.72 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.647 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere (26.316 % of family members)
Environment Ontology (ENVO)	Unclassified (30.827 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.090 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.38% β-sheet: 0.00% Coil/Unstructured: 53.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00211	Guanylate_cyc	3.01
PF01872	RibD_C	3.01
PF13191	AAA_16	1.50
PF13602	ADH_zinc_N_2	1.50
PF02371	Transposase_20	1.50
PF13460	NAD_binding_10	1.50
PF03631	Virul_fac_BrkB	1.50
PF13683	rve_3	1.50
PF12697	Abhydrolase_6	1.50
PF08378	NERD	1.50
PF00072	Response_reg	0.75
PF04984	Phage_sheath_1	0.75
PF13561	adh_short_C2	0.75
PF08281	Sigma70_r4_2	0.75
PF03083	MtN3_slv	0.75
PF05235	CHAD	0.75
PF04542	Sigma70_r2	0.75
PF13565	HTH_32	0.75
PF00665	rve	0.75
PF02698	DUF218	0.75
PF13464	DUF4115	0.75
PF01740	STAS	0.75
PF03372	Exo_endo_phos	0.75
PF05988	DUF899	0.75
PF06146	PsiE	0.75
PF13808	DDE_Tnp_1_assoc	0.75
PF13546	DDE_5	0.75
PF13560	HTH_31	0.75
PF03706	LPG_synthase_TM	0.75
PF13751	DDE_Tnp_1_6	0.75
PF00069	Pkinase	0.75
PF00391	PEP-utilizers	0.75
PF02810	SEC-C	0.75
PF13676	TIR_2	0.75
PF08240	ADH_N	0.75
PF01544	CorA	0.75
PF03466	LysR_substrate	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	3.01
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.01
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	3.01
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	3.01
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	1.50
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.50
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.75
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.75
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.75
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.75
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.75
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.75
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.75
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.75
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.75
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	0.75
COG3223	Phosphate starvation-inducible membrane PsiE (function unknown)	General function prediction only [R]	0.75
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.75
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	0.75
COG4095	Sugar transporter, SemiSWEET family, contains PQ motif	Carbohydrate transport and metabolism [G]	0.75
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.75
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.75
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.75
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.65 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.65 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.65 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	47.37 %
Unclassified	root	N/A	41.35 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.86 %
Unclassified	root	N/A	41.35 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	33.08 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	4.51 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.01 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.01 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.01 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.26 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.26 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.50 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.50 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	4.51 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.01 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.01 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.26 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.50 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.50 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.50 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.75 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.75 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	0.75 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	4.51 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.01 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.01 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.50 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	1.50 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.75 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.75 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	0.75 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.75 %
Aeromicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	0.75 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
unclassified Blastococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus	4.51 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.01 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.01 %
Nonomuraea lactucae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea lactucae	1.50 %
Frankia torreyi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia torreyi	0.75 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	0.75 %
Actinoplanes ianthinogenes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes ianthinogenes	0.75 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.75 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.75 %
Aeromicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	0.75 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.35 %
Blastococcus sp. TF02A-30	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02A-30	4.51 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.01 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.01 %
Nonomuraea lactucae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea lactucae	1.50 %
Frankia torreyi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia torreyi	0.75 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	0.75 %
Actinoplanes ianthinogenes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes ianthinogenes	0.75 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.75 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.75 %
Aeromicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	0.75 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.75 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000858\|JGI10213J12805_10625177	Not Available	959	Open in IMG/M
3300003373\|JGI25407J50210_10008560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2581	Open in IMG/M
3300003373\|JGI25407J50210_10043429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1149	Open in IMG/M
3300003373\|JGI25407J50210_10047765	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300003373\|JGI25407J50210_10095196	Not Available	736	Open in IMG/M
3300004016\|Ga0058689_10141428	Not Available	547	Open in IMG/M
3300004463\|Ga0063356_102593369	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300005471\|Ga0070698_100098356	All Organisms → cellular organisms → Bacteria	2900	Open in IMG/M
3300005562\|Ga0058697_10475078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02A-30	634	Open in IMG/M
3300005937\|Ga0081455_10146825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1823	Open in IMG/M
3300005981\|Ga0081538_10044875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2750	Open in IMG/M
3300005981\|Ga0081538_10052881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2422	Open in IMG/M
3300005981\|Ga0081538_10091380	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300005981\|Ga0081538_10131426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1176	Open in IMG/M
3300005981\|Ga0081538_10365001	Not Available	522	Open in IMG/M
3300005981\|Ga0081538_10375058	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300006844\|Ga0075428_101956934	Not Available	608	Open in IMG/M
3300006845\|Ga0075421_100197190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2494	Open in IMG/M
3300009094\|Ga0111539_13145364	Not Available	532	Open in IMG/M
3300009100\|Ga0075418_11399802	Not Available	759	Open in IMG/M
3300009147\|Ga0114129_12454405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300009156\|Ga0111538_13400743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	553	Open in IMG/M
3300009789\|Ga0126307_11031407	Not Available	665	Open in IMG/M
3300009789\|Ga0126307_11406616	Not Available	565	Open in IMG/M
3300009789\|Ga0126307_11638474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	523	Open in IMG/M
3300009810\|Ga0105088_1072327	All Organisms → cellular organisms → Bacteria → Terrabacteria group	608	Open in IMG/M
3300009816\|Ga0105076_1046654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea lactucae	782	Open in IMG/M
3300009821\|Ga0105064_1141852	Not Available	514	Open in IMG/M
3300009840\|Ga0126313_10148879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1766	Open in IMG/M
3300009840\|Ga0126313_10201856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1526	Open in IMG/M
3300009840\|Ga0126313_10224110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1451	Open in IMG/M
3300009840\|Ga0126313_10300507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1255	Open in IMG/M
3300009840\|Ga0126313_10980198	Not Available	692	Open in IMG/M
3300009840\|Ga0126313_11772601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	516	Open in IMG/M
3300010037\|Ga0126304_10426679	Not Available	887	Open in IMG/M
3300010037\|Ga0126304_10867031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	613	Open in IMG/M
3300010037\|Ga0126304_10898483	Not Available	602	Open in IMG/M
3300010038\|Ga0126315_10400904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	862	Open in IMG/M
3300010038\|Ga0126315_10458248	Not Available	808	Open in IMG/M
3300010041\|Ga0126312_10342521	Not Available	1059	Open in IMG/M
3300010042\|Ga0126314_10038207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3052	Open in IMG/M
3300010045\|Ga0126311_10894143	Not Available	721	Open in IMG/M
3300010045\|Ga0126311_11333978	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300010045\|Ga0126311_11360495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300010045\|Ga0126311_11391615	All Organisms → cellular organisms → Bacteria → Terrabacteria group	585	Open in IMG/M
3300010166\|Ga0126306_10385589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1094	Open in IMG/M
3300010166\|Ga0126306_10800277	Not Available	760	Open in IMG/M
3300010403\|Ga0134123_13517495	Not Available	507	Open in IMG/M
3300012204\|Ga0137374_10863458	Not Available	667	Open in IMG/M
3300012353\|Ga0137367_10774561	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300012355\|Ga0137369_10670394	Not Available	715	Open in IMG/M
3300012901\|Ga0157288_10289302	Not Available	568	Open in IMG/M
3300013306\|Ga0163162_12198119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633	Open in IMG/M
3300013307\|Ga0157372_13049560	Not Available	535	Open in IMG/M
3300014487\|Ga0182000_10170075	Not Available	807	Open in IMG/M
3300017965\|Ga0190266_10927862	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300018031\|Ga0184634_10013519	All Organisms → cellular organisms → Bacteria	2959	Open in IMG/M
3300018031\|Ga0184634_10204983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	898	Open in IMG/M
3300018054\|Ga0184621_10110117	All Organisms → cellular organisms → Bacteria → Terrabacteria group	980	Open in IMG/M
3300018066\|Ga0184617_1231229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	553	Open in IMG/M
3300018072\|Ga0184635_10014379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2824	Open in IMG/M
3300018073\|Ga0184624_10122122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1128	Open in IMG/M
3300018466\|Ga0190268_11017139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02A-30	662	Open in IMG/M
3300019377\|Ga0190264_11990896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300019767\|Ga0190267_10986172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300026708\|Ga0208712_102864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	655	Open in IMG/M
3300027718\|Ga0209795_10034832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	1622	Open in IMG/M
3300027909\|Ga0209382_12318221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02A-30	504	Open in IMG/M
3300027909\|Ga0209382_12323141	Not Available	503	Open in IMG/M
3300027952\|Ga0209889_1086975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea lactucae	632	Open in IMG/M
3300028596\|Ga0247821_10719802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia torreyi	653	Open in IMG/M
3300028707\|Ga0307291_1213668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02A-30	500	Open in IMG/M
3300028711\|Ga0307293_10195119	Not Available	644	Open in IMG/M
3300028712\|Ga0307285_10057131	Not Available	981	Open in IMG/M
3300028718\|Ga0307307_10102661	Not Available	873	Open in IMG/M
3300028720\|Ga0307317_10190724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02A-30	691	Open in IMG/M
3300028722\|Ga0307319_10114547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300028722\|Ga0307319_10181554	Not Available	686	Open in IMG/M
3300028771\|Ga0307320_10216545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	751	Open in IMG/M
3300028784\|Ga0307282_10280612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	802	Open in IMG/M
3300028791\|Ga0307290_10100739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1053	Open in IMG/M
3300028791\|Ga0307290_10221042	Not Available	694	Open in IMG/M
3300028810\|Ga0307294_10414129	Not Available	509	Open in IMG/M
3300028811\|Ga0307292_10266020	Not Available	714	Open in IMG/M
3300028812\|Ga0247825_11234991	All Organisms → cellular organisms → Bacteria → Terrabacteria group	546	Open in IMG/M
3300028819\|Ga0307296_10035888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2618	Open in IMG/M
3300028824\|Ga0307310_10385118	Not Available	694	Open in IMG/M
3300028876\|Ga0307286_10017077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2303	Open in IMG/M
3300028876\|Ga0307286_10035184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1665	Open in IMG/M
3300028876\|Ga0307286_10391564	Not Available	520	Open in IMG/M
3300028878\|Ga0307278_10007362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5210	Open in IMG/M
3300028880\|Ga0307300_10297832	Not Available	545	Open in IMG/M
3300030499\|Ga0268259_10087786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes ianthinogenes	682	Open in IMG/M
3300031548\|Ga0307408_100129636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1966	Open in IMG/M
3300031548\|Ga0307408_100835225	Not Available	839	Open in IMG/M
3300031548\|Ga0307408_102422118	Not Available	510	Open in IMG/M
3300031731\|Ga0307405_10134162	Not Available	1716	Open in IMG/M
3300031731\|Ga0307405_10151737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1630	Open in IMG/M
3300031731\|Ga0307405_11201433	Not Available	656	Open in IMG/M
3300031731\|Ga0307405_11787314	Not Available	546	Open in IMG/M
3300031824\|Ga0307413_10514574	Not Available	964	Open in IMG/M
3300031824\|Ga0307413_11096605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300031824\|Ga0307413_11851751	Not Available	541	Open in IMG/M
3300031852\|Ga0307410_10504249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	996	Open in IMG/M
3300031852\|Ga0307410_12006895	Not Available	516	Open in IMG/M
3300031901\|Ga0307406_10204085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1457	Open in IMG/M
3300031901\|Ga0307406_10329716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1184	Open in IMG/M
3300031901\|Ga0307406_10934130	Not Available	740	Open in IMG/M
3300031901\|Ga0307406_12055471	Not Available	511	Open in IMG/M
3300031903\|Ga0307407_10767536	Not Available	731	Open in IMG/M
3300031903\|Ga0307407_10827746	Not Available	706	Open in IMG/M
3300031903\|Ga0307407_11466598	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300031903\|Ga0307407_11515062	Not Available	531	Open in IMG/M
3300031911\|Ga0307412_11227077	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300031995\|Ga0307409_100024107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4235	Open in IMG/M
3300031995\|Ga0307409_100291811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1513	Open in IMG/M
3300032002\|Ga0307416_100098498	Not Available	2536	Open in IMG/M
3300032002\|Ga0307416_100362985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1471	Open in IMG/M
3300032002\|Ga0307416_102509024	Not Available	614	Open in IMG/M
3300032002\|Ga0307416_102514987	Not Available	613	Open in IMG/M
3300032002\|Ga0307416_102942319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	570	Open in IMG/M
3300032002\|Ga0307416_103362827	Not Available	535	Open in IMG/M
3300032002\|Ga0307416_103637515	Not Available	516	Open in IMG/M
3300032004\|Ga0307414_11938121	Not Available	550	Open in IMG/M
3300032005\|Ga0307411_10031035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3283	Open in IMG/M
3300032126\|Ga0307415_100012204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	4960	Open in IMG/M
3300032126\|Ga0307415_100323969	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300032126\|Ga0307415_102277833	Not Available	531	Open in IMG/M
3300032159\|Ga0268251_10313190	Not Available	655	Open in IMG/M
3300033550\|Ga0247829_11320109	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300033551\|Ga0247830_10792974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. TF02A-30	753	Open in IMG/M
3300034172\|Ga0334913_096732	All Organisms → cellular organisms → Bacteria → Terrabacteria group	624	Open in IMG/M
3300034174\|Ga0334932_045576	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.38%
Host-Associated	Host-Associated	46.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.87%
Plants	Host-Associated → Plants	46.62%
Aquatic	Environmental → Aquatic	4.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.08%
Roots	Host-Associated → Plants → Roots	7.52%
Sediment	Environmental → Aquatic → Sediment	4.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.26%
Phylloplane	Host-Associated → Plants → Phylloplane	2.26%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	33.08%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	7.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.51%
Sand	Environmental → Terrestrial → Soil → Sand	3.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.26%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	2.26%
Loam	Environmental → Terrestrial → Soil → Loam	1.50%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	1.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	33.08%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	7.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.51%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.01%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.26%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	2.26%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.50%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	1.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.75%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	26.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.80%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	16.54%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	7.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.02%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.01%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.01%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.26%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	2.26%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.50%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300026708	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized -NN628 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030499	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_106251774	3300000858	Soil	MDGVSMVPARRLPSMLRELPVVLGLERVAALADRCPGQR
JGI25407J50210_100085604	3300003373	Tabebuia Heterophylla Rhizosphere	QGVPVVSARRLPSMLRTLPAVLGPERVAALAHQARIRFPAAA*
JGI25407J50210_100434291	3300003373	Tabebuia Heterophylla Rhizosphere	PWGKVVMNGVPVVAARGLPSMLRALPAVVGPERVAWLADQARVRFHAAA*
JGI25407J50210_100477652	3300003373	Tabebuia Heterophylla Rhizosphere	MDGVPVVAAPRLPSMLRQFPPVLGPERLIGLANQARVRFHAAA*
JGI25407J50210_100951962	3300003373	Tabebuia Heterophylla Rhizosphere	MDGVPVMAARRLPSILRELPAVLGPERVAALADQARVRFHAAA*
Ga0058689_101414282	3300004016	Agave	ARLLIARPWGKLIVDGVRVVPAGRLPSMLRHLPAVLGPGRTAELAERARTRFHPAA*
Ga0063356_1025933692	3300004463	Arabidopsis Thaliana Rhizosphere	MAPRSPGQGVTDGVPVVSARRLPSMLRALPAVLGLERVAWLADQAQVRFRAAA*
Ga0070698_1000983562	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDGIPVALARRLPSMLRALPAVLGPEWVAHLADQARVRFHAAA*
Ga0058697_104750781	3300005562	Agave	KVVADGVPVVAARRLPSMLRQLPAVLGPERVANLAAQARIRFHAAA*
Ga0081455_101468253	3300005937	Tabebuia Heterophylla Rhizosphere	AARRLPSMLRVLPAVLGPERVAVLADQARVYFHAAA*
Ga0081538_100448752	3300005981	Tabebuia Heterophylla Rhizosphere	MNGVPVVAARGLPSMLRALPAVVGPERVAWLADLARVRLHAAA*
Ga0081538_100528812	3300005981	Tabebuia Heterophylla Rhizosphere	MNGMPVVAVRGLRSMLRTLPAVVGPEWVAWLADLARIRFHAAA*
Ga0081538_100913801	3300005981	Tabebuia Heterophylla Rhizosphere	MAPNPWGKVVTQGVPVVAARRLPSMLRALPAVLAPGRVAVLADQARVRFHAAT*
Ga0081538_101314261	3300005981	Tabebuia Heterophylla Rhizosphere	VMNGVPVVAARRLPSMLRQLPAVLGPERVAWLADQARVRFDAAA*
Ga0081538_103650012	3300005981	Tabebuia Heterophylla Rhizosphere	GKVVMNGVPVVAARGLPSMLRALSAVVGPEWVAWLADLARVRLHAAA*
Ga0081538_103750581	3300005981	Tabebuia Heterophylla Rhizosphere	PWGKVVVDGVPVVPARRLPSMLRALPGVLGPERVANLADRARVRFHPAA*
Ga0075428_1019569341	3300006844	Populus Rhizosphere	PWGKVVTNGVPVLAARRLPSMLRNLPAVLGPERVTTLADQARIRFRAAA*
Ga0075421_1001971901	3300006845	Populus Rhizosphere	RRLPSMLRQLPAVLGPERVAWLADQARIRFHAAA*
Ga0111539_131453641	3300009094	Populus Rhizosphere	WGKVVTDGVPVVSAQRLPSMLRGLPAVLGPERVAWLADQARVSFHAAG*
Ga0075418_113998022	3300009100	Populus Rhizosphere	KVVVRGIPVVSARRLPSMLRALPALLGPERVADLAVQVRVRFHAAA*
Ga0114129_124544051	3300009147	Populus Rhizosphere	AKRLPSMLCALPAVLGPERVAVLADQARVRFHAAA*
Ga0111538_134007432	3300009156	Populus Rhizosphere	PWDKVVIHGVPVVSARRLPSMLRALPVVLGPERVAALADQARVRFHAAAEPHP*
Ga0126307_110314072	3300009789	Serpentine Soil	ARRLPSMLRQLPMVLGPERVAEVANQARIRFRAAA*
Ga0126307_114066162	3300009789	Serpentine Soil	RRLPSMLRQLPAVLRPEQVAAVANQARVRFHAAA*
Ga0126307_116384742	3300009789	Serpentine Soil	DGVPVVSARRLPSMLRQLPVVLGSERVAWLADHARVRFHAAG*
Ga0105088_10723271	3300009810	Groundwater Sand	QVPWGKVVMQGVPVVAARRLPSMLRSLPAVLGPERVAVLADQARVRFHAAA*
Ga0105076_10466541	3300009816	Groundwater Sand	QVPWGKVVVNGVPVVAARRLPSMLRQLPAVLGPERVAALAAQARVRFHASG*
Ga0105064_11418521	3300009821	Groundwater Sand	EGVPVVPAGRLPSMLRQLPAVLGPERIAVLANQARIRFRAAA*
Ga0126313_101488794	3300009840	Serpentine Soil	MDGVPVVSARRLPRMLRALPVVLGPERVADLADRARVRFRAAA*
Ga0126313_102018562	3300009840	Serpentine Soil	LGKVVIDGVPVVSARRLPSMLGQLPVVLGPERVTWLADQARVRFHAAG*
Ga0126313_102241102	3300009840	Serpentine Soil	VSARRLPSMLRQLPVVLRPERVAWLADQARVRFHAAG*
Ga0126313_103005072	3300009840	Serpentine Soil	SARRLPSLLCQLPAVLGPERVAWLADQARVRFHAAA*
Ga0126313_109801981	3300009840	Serpentine Soil	VQGVPVVPARRLPSMLRQLPTVLGPERVTGLADQARIRFHAAA*
Ga0126313_117726011	3300009840	Serpentine Soil	VEGVPVVTARRLPSMLRQLPAVLGPERVAWQADQARIRFHPAA*
Ga0126304_104266792	3300010037	Serpentine Soil	IPVVPARRLPSMLRALPALLGPERIAALADQARVRFHAAA*
Ga0126304_108670312	3300010037	Serpentine Soil	VADGVPVVAARRLPSMLGQLPAVLGPERVAGLAAQARIRFHAAA*
Ga0126304_108984831	3300010037	Serpentine Soil	KVVMDGVPVVPARRLPSMLRELPAVLGPERVAAVANQARTRFRAAA*
Ga0126315_104009042	3300010038	Serpentine Soil	VVNGVPVVAARRLRSMLRSLPAVLSPERVAALADQVRIGFHPAA*
Ga0126315_104582481	3300010038	Serpentine Soil	KVVVEGVPVVLARRLPSMLRALPGVLGPERVAALAHQARIRFRAAA*
Ga0126312_103425211	3300010041	Serpentine Soil	RRLPSLLRQLPAVLGPERVAWLADQARVRFHAPA*
Ga0126314_100382073	3300010042	Serpentine Soil	PWGKVVMDGVRVVTARRLPSMLRQLPVVLGPKRVAWLADQARVRFHAAG*
Ga0126311_108941432	3300010045	Serpentine Soil	MDGVPVVAARRLPSMLRQLPTVLGPERVAGLADQARLRFHAAA*
Ga0126311_113339781	3300010045	Serpentine Soil	RRLPSMLRALPLVLGPERVAWLADQARIRFRPAA*
Ga0126311_113604951	3300010045	Serpentine Soil	VPWGKVVVEGVPVVAARRLPSMLRALPPLLGPERITAVADQARVRFHTAA*
Ga0126311_113916152	3300010045	Serpentine Soil	VTQGVPVVAAKRLPSMLRALPAVLGPERVTGLADQARIRFRAAA*
Ga0126306_103855892	3300010166	Serpentine Soil	ARRLPSMLGQLPAVLGPERVANLADQARVRFQAAAQWLY*
Ga0126306_108002772	3300010166	Serpentine Soil	MDGVPVVPARRLPSMLGELPAVLGPERVAILADQARVRFHAAA*
Ga0134123_135174951	3300010403	Terrestrial Soil	VLPARRLPSMLGARPAVLGPEQVAAVASQARIRFRAAA*
Ga0137374_108634582	3300012204	Vadose Zone Soil	KLVVEGVPVVPARRLPSMLRALPTVLAPERVAGLADQARIRFHPAA*
Ga0137367_107745611	3300012353	Vadose Zone Soil	QVPWGKLVVNGVPVVTARRLLGLLRGLPAVLGPERVAALADAARVRFHAAA*
Ga0137369_106703941	3300012355	Vadose Zone Soil	WGKLVVDGVPVVSARRLPGLLRHLPAVLGPERVAGLANRGRVCFHAAA*
Ga0157288_102893021	3300012901	Soil	MGVQVVAARRLPSMLRQLPAVLGSERVAGLTDQARIRFHAAA*
Ga0163162_121981192	3300013306	Switchgrass Rhizosphere	VVMDGVPVVSARRLPSMLCALPEVLGPEWVAALADQGRIRLHPAA*
Ga0157372_130495601	3300013307	Corn Rhizosphere	WGKVVTRGVPVVAAKRLPSMLRQLPAVLGPEQVANLAAQARVRFHPAAKTKRL*
Ga0182000_101700751	3300014487	Soil	PRGKVVIKGIPVVAAQRLPNMLRQLPAVLGPERVAGLADQARVRFHAAA*
Ga0190266_109278622	3300017965	Soil	SARRLPSLLGALPLVLAPERVAGLANQARIRFHPAA
Ga0184634_100135195	3300018031	Groundwater Sediment	VVTQGVPVVSARRLPSMLRTLPAVLGPERVAALADRARVRFRAAA
Ga0184634_102049831	3300018031	Groundwater Sediment	NGVPVVAARRLPSMLRQLPAVLGPERVAALATQARVGFHTAG
Ga0184621_101101171	3300018054	Groundwater Sediment	MDGVPVVSARRLPSMLRTLPAVLGPERVAALADQARVRFRAA
Ga0184617_12312292	3300018066	Groundwater Sediment	GKVVTDGVPLVTARRLPSLLGGLPPMLGPERVANLADQARVRFRAAA
Ga0184635_100143794	3300018072	Groundwater Sediment	SMAPGPWGKVVMDGVPVVAATRLPSLLRGLPAVLGPERVAGLADRARVRFHAAA
Ga0184624_101221222	3300018073	Groundwater Sediment	MDGVPVVAATRLPSLLRGLPAVLGPERVAGLADRARVRFHAAA
Ga0190268_110171392	3300018466	Soil	QVPWGKVVMDGVPVVSARRLPSMLGQLPAVLGPERVAALADQARVRFHAAA
Ga0190264_119908962	3300019377	Soil	IDGVPVVAARRLPGMLRELPVVLGPERVADLANQARVRFHAAA
Ga0190267_109861722	3300019767	Soil	WGKVVTDGVPVVAARRLPSMLRALPAVLGPERVAWLADQARVRFHPAS
Ga0208712_1028642	3300026708	Soil	MSGVPVVPARRLPSMLCELPAVLGPERVAVLADQAR
Ga0209795_100348321	3300027718	Agave	YGRCAVVAARRLPSMLRALPAVLGPERVATLADQARIGFHPAA
Ga0209382_123182211	3300027909	Populus Rhizosphere	QVPWGKVVVRGVPVVPARQLPSMLRQLPAVLGPERVAILADQARVRFHAAA
Ga0209382_123231411	3300027909	Populus Rhizosphere	AQVPWGKVVIDGVPVVPARRLPSMLRQLPAVLGPERVAWLADQARIRFHAAA
Ga0209889_10869752	3300027952	Groundwater Sand	QVPWGKVVVNGVPVVAARRLPSMLRQLPAVLGPERVAALAAQARVRFHASG
Ga0247821_107198021	3300028596	Soil	VVAAKRLPSMLRHLPAVLGPERVAVLADQARVRFHAAA
Ga0307291_12136682	3300028707	Soil	GVPVVSARRLPSMLRALPAVLGPERVAVLADQARVRFHAAA
Ga0307293_101951192	3300028711	Soil	VPVVSARRLPSMLRQLPAMLGPERVAWLADQARVRFHAAA
Ga0307285_100571313	3300028712	Soil	GKMVTQCVPVVSARRLPSMLRALPGVLGPERVAAVAHQARIRFRAAA
Ga0307307_101026611	3300028718	Soil	GVPVLAVRRLPSMLGSLPAVLGPERVTALADQARIRFRAAA
Ga0307317_101907241	3300028720	Soil	VMDGVPVVSARRLPSMLRALPAVLGPERVAVLADQARVRFHAAA
Ga0307319_101145471	3300028722	Soil	TNGVPVLAARRLPSMLRQFPVALGSERVAWLTDRARLRFHAAA
Ga0307319_101815541	3300028722	Soil	VVSARRLPSMLRALPAVLGPERVAALAHQARIRFRAAA
Ga0307320_102165452	3300028771	Soil	PWGKVVMDGVPVVAARRLPSMLCALPAVLGPERVAGLTDQARIRFRAAA
Ga0307282_102806121	3300028784	Soil	VVPASRLPSMLRQLPAMLGPERVAGLADQARVRFHAAA
Ga0307290_101007391	3300028791	Soil	ARRLPSMLRQLPAMLGPERVAWLADQARVRFHAAA
Ga0307290_102210421	3300028791	Soil	VPWGKVVVDGIPVVSARRLPSMLRQLPAVLGPERVAAIASQARIRFRTAA
Ga0307294_104141292	3300028810	Soil	LVVAARRLPSMLRALPPVLGPERVAWLADQARIRFHPAA
Ga0307292_102660201	3300028811	Soil	VDGIPVVSARRLPSMLRQLPAVLGPERVAAIASQARIRFRTAA
Ga0247825_112349911	3300028812	Soil	VPVPWGKVVTDGVPVVAARRLPSMLRALPAVLGPERVAWLADQARVRFHPAS
Ga0307296_100358882	3300028819	Soil	MAPGPWGKFVMDGVPVVAATRLPSLLRGLPAVLGPERVAGLADQARVRFHAAA
Ga0307310_103851181	3300028824	Soil	RWVTNGVPVLAVRRLPSMLGSLPAVLGPERVTALADQARIRFRAAA
Ga0307286_100170771	3300028876	Soil	VIDGVPVLPAKRLPSMLRELPAVLGPERVAVLADQARIHFYAAA
Ga0307286_100351843	3300028876	Soil	TQGVPVVSARRLPSMLRQLPAMLGPERVAWLADQARVRFHAAA
Ga0307286_103915641	3300028876	Soil	MAPGPWGKVVMDGVPVVAATRLPSLLRGLPAVLGPERVAGLADRARVRFHAAA
Ga0307278_100073623	3300028878	Soil	VPVVAARRLPELLRRLPATLGPERVAGLANAARIRFLASA
Ga0307300_102978321	3300028880	Soil	VVPARRLPSMLRQLPAVLGPERVAGVASEARIRFRAAA
Ga0268259_100877862	3300030499	Agave	AARRLASMLRALPAVLGPERVAELADRARVRFHPAA
Ga0307408_1001296364	3300031548	Rhizosphere	MDGIPVVPAKRLPSMLLALPTVLGPERVAELADQARVRFHAAA
Ga0307408_1008352251	3300031548	Rhizosphere	KVVVQGVPVVPARRLPSMLRQLPTVLGPERVAWLADQARIRFHAAA
Ga0307408_1024221181	3300031548	Rhizosphere	KVVVQGVPVVPARRLPSMLRQLPAVLGPERVAVLADQARVRFHAAA
Ga0307405_101341621	3300031731	Rhizosphere	VVGGVPVVTARRLPSMLRQLPMVLGPERVAEVANQARIRFRGAA
Ga0307405_101517371	3300031731	Rhizosphere	DGVPVVSARRLPSMLRQLPVVLGPERVAWLADQARVRFHAAG
Ga0307405_112014331	3300031731	Rhizosphere	VAARRLPSMLRALPAVLGPERVADLADQARVRFHAAA
Ga0307405_117873141	3300031731	Rhizosphere	VVPARRLPSMLRQLPTVLGPERVTGLADQARIRFHAAA
Ga0307413_105145741	3300031824	Rhizosphere	VGVPVVAARRLPSMLRQLPAVLGPERVAALAHQARIRFHAAA
Ga0307413_110966051	3300031824	Rhizosphere	PWGKVVIDGVPVVSARRLPSMLGQLPVVLGPERVGWLADQARIRFRAAA
Ga0307413_118517512	3300031824	Rhizosphere	IVPAKRLPSMLLALPTVLGPERVAELANEARVRLHAAA
Ga0307410_105042491	3300031852	Rhizosphere	VVVEGIPVVPARRLPSMLRALPALLGPERIAALADQARVRFHAAA
Ga0307410_120068951	3300031852	Rhizosphere	MPIVPARRLPSMLRQLPAVLGPERVANLADQARVRFNAAD
Ga0307406_102040853	3300031901	Rhizosphere	VPAVSARRLPSMLRQLPVVLAPERVAALADQARIRFHPAA
Ga0307406_103297161	3300031901	Rhizosphere	MDGAPIVPAKRLPSMLLALPTVLGPERVAELANEARVRLHAAA
Ga0307406_109341301	3300031901	Rhizosphere	VVIDGVPVVSARRLPSMLGQLPVVLGPERVGWLADQARIRFHAAG
Ga0307406_120554711	3300031901	Rhizosphere	VPVVAARRLPSMLRALPAVLGPERVADLADQARIRFHAAA
Ga0307407_107675361	3300031903	Rhizosphere	KVVTKGVPVVAARRLPSMLRALPAVLGPERVAGLADQARVRFHAAA
Ga0307407_108277462	3300031903	Rhizosphere	MDGIPVVPAWRLPSMLRTLPAVLGPERVAGLTDQARVRFHA
Ga0307407_114665981	3300031903	Rhizosphere	GKVVVEGVPVVPARRLPSMLRHLPAVLGREQVAALASQARIRFRAAA
Ga0307407_115150621	3300031903	Rhizosphere	VVAARRLPRMLRQLPTVLGPERVTGLADQARIRFHPAA
Ga0307412_112270771	3300031911	Rhizosphere	GVPVVTARRLPSMLRALPLVLGPEQVAWLADQARIRFHPAA
Ga0307409_1000241074	3300031995	Rhizosphere	WGRVVVGGVPVVTARRLPSMLRQLPMVLGPERVAEVANQARICFRAAA
Ga0307409_1002918111	3300031995	Rhizosphere	VAEGVPVVAARRLPSMLRGLPAVLGPERVASLADQARVRFHAAP
Ga0307416_1000984981	3300032002	Rhizosphere	VPVVSARRLPSMLGQLPVVLGPERVGWLADQARIRFHAAG
Ga0307416_1003629852	3300032002	Rhizosphere	ARRLPSMLRQLPVLLGPERVAGLTDQARIRFHAAG
Ga0307416_1025090241	3300032002	Rhizosphere	VPVVAARRLPSMLCQLPAVLGPERVAWLADQARVRFHAAA
Ga0307416_1025149871	3300032002	Rhizosphere	QVPWGKVVMVGVPVVAARRLPSMLRQLPAVLGPERVAALAHQARIRFHAAA
Ga0307416_1029423192	3300032002	Rhizosphere	QGVPVVSARRLPSMLRALPAVLGPERVAGLADRARLRFRPAA
Ga0307416_1033628271	3300032002	Rhizosphere	PAKRLPDMLRQLPAVLGPERVAWLADQARLRFHAAA
Ga0307416_1036375151	3300032002	Rhizosphere	VPWGKVVVDGVPVVAAQRLPSRLLALPAVLGPERVAWLADQARVSFHAAG
Ga0307414_119381212	3300032004	Rhizosphere	RLPSMLRQLPVVLGPERVAWLADQARVRFHAAGNR
Ga0307411_100310351	3300032005	Rhizosphere	GVPVLAARRLPRMLRALPAVLGPEWVAGLADQARVRFHATA
Ga0307415_1000122041	3300032126	Rhizosphere	PWGKVVIDGVPVVSARRLPSMLGQLPVVLGPERVGWLADQARIRFHAAG
Ga0307415_1003239693	3300032126	Rhizosphere	VAARRLPSMLRQLPAVFGPERVTALANQARIRFHAAA
Ga0307415_1022778331	3300032126	Rhizosphere	PWGKVVMDGVPVVAARRLPRLLRQLPAVLGPERVADLADQARVRFHAAA
Ga0268251_103131901	3300032159	Agave	VDGVRVVMARRLPSMLRQLPVVLGPEWVAWLADQARVRFQAAG
Ga0247829_113201092	3300033550	Soil	MDGVPVVSARRLPSMLRQLPAVLGPERVSAVANQARIRFHAAG
Ga0247830_107929741	3300033551	Soil	VPVVPARQLPSMLRQLPAVLGPERVAILADQARVRFHAAA
Ga0334913_096732_3_149	3300034172	Sub-Biocrust Soil	GGKVVTQGVPVVAAKRLPSMLRQLPAVLGPGRVAWLADQARIRFHAAA
Ga0334932_045576_17_148	3300034174	Sub-Biocrust Soil	MEGVPVVAARHLPSMLRQLPAVLGPERVAVLADQARVRFHAAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F059742

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences