NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F059820

Metagenome Family F059820

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F059820
Family Type Metagenome
Number of Sequences 133
Average Sequence Length 47 residues
Representative Sequence NIGFSKDGKTAFIAVRGANDVAVIDIEKLALASRIKAGTEPQGLIVR
Number of Associated Samples 113
Number of Associated Scaffolds 133

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 6.02 %
% of genes near scaffold ends (potentially truncated) 92.48 %
% of genes from short scaffolds (< 2000 bps) 88.72 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (91.729 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(22.556 % of family members)
Environment Ontology (ENVO) Unclassified
(30.827 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.135 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 29.33%    Coil/Unstructured: 70.67%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.68
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 133 Family Scaffolds
PF00440TetR_N 7.52
PF00296Bac_luciferase 6.77
PF08545ACP_syn_III 5.26
PF00496SBP_bac_5 3.01
PF08497Radical_SAM_N 3.01
PF01654Cyt_bd_oxida_I 3.01
PF12833HTH_18 3.01
PF07690MFS_1 2.26
PF04392ABC_sub_bind 1.50
PF00027cNMP_binding 1.50
PF03739LptF_LptG 1.50
PF07589PEP-CTERM 1.50
PF00753Lactamase_B 1.50
PF03006HlyIII 1.50
PF08240ADH_N 0.75
PF13544Obsolete Pfam Family 0.75
PF07963N_methyl 0.75
PF13193AMP-binding_C 0.75
PF01527HTH_Tnp_1 0.75
PF12867DinB_2 0.75
PF13924Lipocalin_5 0.75
PF09585Lin0512_fam 0.75
PF03466LysR_substrate 0.75
PF08334T2SSG 0.75
PF00034Cytochrom_C 0.75
PF00892EamA 0.75
PF01575MaoC_dehydratas 0.75
PF16490Oxidoreduct_C 0.75
PF13084DUF3943 0.75
PF02806Alpha-amylase_C 0.75
PF00005ABC_tran 0.75
PF11987IF-2 0.75
PF11842DUF3362 0.75
PF02417Chromate_transp 0.75
PF09650PHA_gran_rgn 0.75
PF02653BPD_transp_2 0.75
PF13936HTH_38 0.75
PF10282Lactonase 0.75
PF00694Aconitase_C 0.75
PF07883Cupin_2 0.75

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 133 Family Scaffolds
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 6.77
COG1032Radical SAM superfamily enzyme YgiQ, UPF0313 familyGeneral function prediction only [R] 3.01
COG1271Cytochrome bd-type quinol oxidase, subunit 1Energy production and conversion [C] 3.01
COG0795Lipopolysaccharide export LptBFGC system, permease protein LptFCell wall/membrane/envelope biogenesis [M] 1.50
COG1272Predicted membrane channel-forming protein YqfA, hemolysin III familyIntracellular trafficking, secretion, and vesicular transport [U] 1.50
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 1.50
COG02961,4-alpha-glucan branching enzymeCarbohydrate transport and metabolism [G] 0.75
COG0366Glycosidase/amylase (phosphorylase)Carbohydrate transport and metabolism [G] 0.75
COG1523Pullulanase/glycogen debranching enzymeCarbohydrate transport and metabolism [G] 0.75
COG2059Chromate transport protein ChrAInorganic ion transport and metabolism [P] 0.75

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.73 %
UnclassifiedrootN/A8.27 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000363|ICChiseqgaiiFebDRAFT_14515522All Organisms → cellular organisms → Bacteria1775Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101922014All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300000956|JGI10216J12902_112470263All Organisms → cellular organisms → Bacteria → Proteobacteria502Open in IMG/M
3300002560|JGI25383J37093_10094846All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300004268|Ga0066398_10103963All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300004633|Ga0066395_10828724All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300005172|Ga0066683_10179659All Organisms → cellular organisms → Bacteria1304Open in IMG/M
3300005178|Ga0066688_10175214All Organisms → cellular organisms → Bacteria1353Open in IMG/M
3300005180|Ga0066685_10907092All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes588Open in IMG/M
3300005180|Ga0066685_11119094All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300005332|Ga0066388_103201787All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300005332|Ga0066388_104280812All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300005332|Ga0066388_104857637All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300005445|Ga0070708_102260156All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300005446|Ga0066686_10560870All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium776Open in IMG/M
3300005467|Ga0070706_102077886All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300005526|Ga0073909_10491036All Organisms → cellular organisms → Bacteria → Proteobacteria592Open in IMG/M
3300005546|Ga0070696_100833497All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300005552|Ga0066701_10107040All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1640Open in IMG/M
3300005555|Ga0066692_10104148All Organisms → cellular organisms → Bacteria1687Open in IMG/M
3300005559|Ga0066700_10794178All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales638Open in IMG/M
3300005559|Ga0066700_10959627All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300005560|Ga0066670_10835879All Organisms → cellular organisms → Bacteria → Proteobacteria559Open in IMG/M
3300005561|Ga0066699_10841428All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300005561|Ga0066699_10885504All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NBAIM32624Open in IMG/M
3300005586|Ga0066691_10033804All Organisms → cellular organisms → Bacteria2661Open in IMG/M
3300005598|Ga0066706_10214412All Organisms → cellular organisms → Bacteria1485Open in IMG/M
3300005713|Ga0066905_102016849All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300005718|Ga0068866_10654270All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300005764|Ga0066903_109157939All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300006049|Ga0075417_10118722All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300006058|Ga0075432_10215452All Organisms → cellular organisms → Bacteria → Proteobacteria766Open in IMG/M
3300006794|Ga0066658_10589822All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300006796|Ga0066665_11663775All Organisms → cellular organisms → Bacteria → Proteobacteria504Open in IMG/M
3300006797|Ga0066659_10360837All Organisms → cellular organisms → Bacteria1130Open in IMG/M
3300006797|Ga0066659_10747250All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300006844|Ga0075428_100896023All Organisms → cellular organisms → Bacteria941Open in IMG/M
3300006846|Ga0075430_100293521All Organisms → cellular organisms → Bacteria1345Open in IMG/M
3300006852|Ga0075433_11151685All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300006854|Ga0075425_102573843All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300006871|Ga0075434_100367122All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1460Open in IMG/M
3300006880|Ga0075429_100016952All Organisms → cellular organisms → Bacteria → Proteobacteria6302Open in IMG/M
3300006904|Ga0075424_102048521All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300006904|Ga0075424_102218655All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300007076|Ga0075435_100805986All Organisms → cellular organisms → Bacteria → Proteobacteria818Open in IMG/M
3300007076|Ga0075435_101817033All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium535Open in IMG/M
3300009012|Ga0066710_100149255All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales3247Open in IMG/M
3300009100|Ga0075418_11408965All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300009156|Ga0111538_13346516All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria557Open in IMG/M
3300010046|Ga0126384_10020581All Organisms → cellular organisms → Bacteria → Proteobacteria4254Open in IMG/M
3300010320|Ga0134109_10074264Not Available1156Open in IMG/M
3300010358|Ga0126370_11722244All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300010362|Ga0126377_12312874All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria613Open in IMG/M
3300010366|Ga0126379_10363827All Organisms → cellular organisms → Bacteria1482Open in IMG/M
3300010366|Ga0126379_13623905Not Available517Open in IMG/M
3300010376|Ga0126381_104169464All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300010398|Ga0126383_11126013All Organisms → cellular organisms → Bacteria874Open in IMG/M
3300010868|Ga0124844_1162464All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300010868|Ga0124844_1162465All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300010868|Ga0124844_1164015All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300010868|Ga0124844_1164017All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300012096|Ga0137389_11258990All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300012200|Ga0137382_10576760Not Available802Open in IMG/M
3300012203|Ga0137399_11485739All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium565Open in IMG/M
3300012205|Ga0137362_11121057All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria668Open in IMG/M
3300012206|Ga0137380_10782213All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300012206|Ga0137380_11295210All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300012209|Ga0137379_10525139All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1091Open in IMG/M
3300012209|Ga0137379_10791320Not Available853Open in IMG/M
3300012209|Ga0137379_11243755All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300012349|Ga0137387_10205258All Organisms → cellular organisms → Bacteria1416Open in IMG/M
3300012349|Ga0137387_10600571Not Available798Open in IMG/M
3300012351|Ga0137386_10505642All Organisms → cellular organisms → Bacteria870Open in IMG/M
3300012353|Ga0137367_10158234All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1651Open in IMG/M
3300012362|Ga0137361_10762026All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300012582|Ga0137358_10650698All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300012917|Ga0137395_10861049All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium656Open in IMG/M
3300012922|Ga0137394_10808009Not Available786Open in IMG/M
3300012923|Ga0137359_11072453All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium690Open in IMG/M
3300012929|Ga0137404_10013103All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium5800Open in IMG/M
3300012948|Ga0126375_11590380All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium562Open in IMG/M
3300012972|Ga0134077_10555788All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium515Open in IMG/M
3300012977|Ga0134087_10795709All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium511Open in IMG/M
3300014154|Ga0134075_10015846All Organisms → cellular organisms → Bacteria → Proteobacteria2956Open in IMG/M
3300015053|Ga0137405_1373066All Organisms → cellular organisms → Bacteria2259Open in IMG/M
3300015264|Ga0137403_10869900All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium752Open in IMG/M
3300015372|Ga0132256_101199880All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300018431|Ga0066655_10073378All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1841Open in IMG/M
3300018431|Ga0066655_11140316All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium548Open in IMG/M
3300018433|Ga0066667_11120532All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300018468|Ga0066662_10017524All Organisms → cellular organisms → Bacteria3924Open in IMG/M
3300018482|Ga0066669_10072239All Organisms → cellular organisms → Bacteria2285Open in IMG/M
3300018482|Ga0066669_10377456All Organisms → cellular organisms → Bacteria1190Open in IMG/M
3300024330|Ga0137417_1392033All Organisms → cellular organisms → Bacteria1359Open in IMG/M
3300025911|Ga0207654_10847381All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300025934|Ga0207686_10139630All Organisms → cellular organisms → Bacteria → Acidobacteria1673Open in IMG/M
3300025981|Ga0207640_12160115All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300026295|Ga0209234_1029715All Organisms → cellular organisms → Bacteria2073Open in IMG/M
3300026296|Ga0209235_1138056All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria994Open in IMG/M
3300026306|Ga0209468_1093024All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium986Open in IMG/M
3300026315|Ga0209686_1085076All Organisms → cellular organisms → Bacteria1114Open in IMG/M
3300026318|Ga0209471_1050702All Organisms → cellular organisms → Bacteria1929Open in IMG/M
3300026326|Ga0209801_1032336All Organisms → cellular organisms → Bacteria2470Open in IMG/M
3300026330|Ga0209473_1154086Not Available927Open in IMG/M
3300026332|Ga0209803_1240051All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria630Open in IMG/M
3300026529|Ga0209806_1088348All Organisms → cellular organisms → Bacteria1352Open in IMG/M
3300026537|Ga0209157_1016275All Organisms → cellular organisms → Bacteria4751Open in IMG/M
3300026538|Ga0209056_10003565All Organisms → cellular organisms → Bacteria16538Open in IMG/M
3300026538|Ga0209056_10156831All Organisms → cellular organisms → Bacteria1732Open in IMG/M
3300027654|Ga0209799_1076685Not Available753Open in IMG/M
3300027765|Ga0209073_10202333All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300027862|Ga0209701_10579774Not Available598Open in IMG/M
3300027874|Ga0209465_10011308All Organisms → cellular organisms → Bacteria3964Open in IMG/M
3300028828|Ga0307312_10459374All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300028878|Ga0307278_10230115All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300031170|Ga0307498_10439458All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria521Open in IMG/M
3300031562|Ga0310886_10797135All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300031720|Ga0307469_12534345Not Available501Open in IMG/M
3300031736|Ga0318501_10278990All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300031740|Ga0307468_100033533All Organisms → cellular organisms → Bacteria2483Open in IMG/M
3300031794|Ga0318503_10153059All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium744Open in IMG/M
3300031820|Ga0307473_10193260All Organisms → cellular organisms → Bacteria1201Open in IMG/M
3300031820|Ga0307473_10259944All Organisms → cellular organisms → Bacteria1070Open in IMG/M
3300031913|Ga0310891_10247428All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria615Open in IMG/M
3300032001|Ga0306922_11215835All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300032013|Ga0310906_10899272All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria631Open in IMG/M
3300032067|Ga0318524_10358283All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium758Open in IMG/M
3300032122|Ga0310895_10592908Not Available567Open in IMG/M
3300032174|Ga0307470_10550484All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria853Open in IMG/M
3300032180|Ga0307471_101190293All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium926Open in IMG/M
3300032205|Ga0307472_102633885All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium513Open in IMG/M
3300032211|Ga0310896_10279134All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300032261|Ga0306920_102843909All Organisms → cellular organisms → Bacteria658Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil22.56%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil17.29%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.53%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil9.77%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil7.52%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.02%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.01%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.26%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.50%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.75%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.75%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.75%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.75%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.75%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300004268Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBioEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010868Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300027654Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031794Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031913Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiFebDRAFT_1451552243300000363SoilDQGGTNIGFSKDGKTAFIAVTGANSVAVVDVQKLALESQIKAGKEPQGLIVR*
INPhiseqgaiiFebDRAFT_10192201423300000364SoilIGFSKDGKTAFIAVTGANSVAVVDVQKLALESQIKAGKEPQGLIVR*
JGI10216J12902_11247026323300000956SoilVKRLTIGQGGSNIGFSQDGRTAFIAVRGANEVAVIDIAKLALASRITAGTEPQGLIVR*
JGI25383J37093_1009484623300002560Grasslands SoilVRFIYGQSNKRVNIGEGGANIGFSKDGKTAFIALTGANAVAVIDVDKLTLISQIKAGKQPQGLIVW*
Ga0066398_1010396323300004268Tropical Forest SoilGANIGFSKDGKTAFIAVRGTNEVAVIDIARLALESRIRAGTEPQGLIVR*
Ga0066395_1082872423300004633Tropical Forest SoilGKTAFIAVTGANTVAVVDVAKLALETHITAGKEPQGLIVR*
Ga0066683_1017965913300005172SoilGQGGTNIGFSKDGKTAFIAVTGANSVAVIDVQKLALESQIKAGKEPQGLIVR*
Ga0066688_1017521423300005178SoilVRFIYGQSNKRVNIGEGGANIGFSKDGKTAFIALTGANAVAVIDVDKLTLISQIKAGKQPQGLIVR*
Ga0066685_1090709213300005180SoilTIGQGGSNIGFSKDGKTAFIAVRGANDVAVIDIEKLALASRIKAGTEPQGLIVR*
Ga0066685_1111909413300005180SoilQGGANIGFSKDGKTAFIAVRGANDVAVIDIATLALATRIRAGTEPQGLIVR*
Ga0066388_10320178723300005332Tropical Forest SoilNIGFSKDGKTAFIAVRGANDVAVIDIEKLALASRIKAGTEPQGLIVR*
Ga0066388_10428081223300005332Tropical Forest SoilGKTAFIAVTGANSVAVIDTEVAFERRIEAGQEPQGLIVR*
Ga0066388_10485763723300005332Tropical Forest SoilNIGFSKDGRTAFIAVRGANDVAVIDIEKLALAGRIRAGTEPQGLIVR*
Ga0070708_10226015613300005445Corn, Switchgrass And Miscanthus RhizosphereQGGSNIGFSKDGKTAFIAVRGANDVAVIDMEKLALASRIKAGTEPQGLIVR*
Ga0066686_1056087023300005446SoilTIGQGGTNIGFSKDGKTAFIAVTGANSVAVVDVQKLALESQIRAGREPQGLIVR*
Ga0070706_10207788613300005467Corn, Switchgrass And Miscanthus RhizosphereIGPGGSNIGFSKDGRTGFIAVTGANAVAVIDVAKLALAGLVQAGAAPQGLIVR*
Ga0073909_1049103623300005526Surface SoilTNIGFSKDGKTAFIAVTGANSVAVVDVQKLALESQIKAGKEPQGLIVR*
Ga0070696_10083349723300005546Corn, Switchgrass And Miscanthus RhizosphereGKTAFIAVRGTNEVAVIDIAKLALESRIRAGTEPQGLIVR*
Ga0066701_1010704043300005552SoilFIAVRGANDVAVIDIEKLVLAGRIRAGTEPQGLIVR*
Ga0066692_1010414813300005555SoilLPFWTERLVRFIYGQSNKRVNIGEGGANIGFSKDGKTAFIALTGANAVAVIDVDKLTLISQIKAGKQPQGLIVW*
Ga0066700_1079417813300005559SoilIGFSKDGKTAFIAVTGANSVAVVDVQKLALESQIRAGREPQGLIVR*
Ga0066700_1095962723300005559SoilDGKTAFIAVRGANDVAVIDIEKLALATRIKAGTEPQGLIVR*
Ga0066670_1083587923300005560SoilRTFKEVKRLTIGEGGANIGFSRDGRTAFIAVRGANDVAVIDVGKLALASRIRAGTEPQGLIVR*
Ga0066699_1084142823300005561SoilQGGANIGFSKDGKTAFIAVRGTNDVAVIDIATLALATRIKAGTEPQGLIVR*
Ga0066699_1088550423300005561SoilGFSRDGKTAFIAVRGANDVAVIDIENLALATRIRAGTEPQGLIVR*
Ga0066691_1003380453300005586SoilVRFIYGQSNKRVNIGEGGANIGFSKDGKTAFIALTGANAVAVIDVDKLTLISQIKAGKQPPGLIVR*
Ga0066706_1021441213300005598SoilFSKDGKTAFIAVRGANEVAVIDLDKLTLASRITAGTEPQGLIVR*
Ga0066905_10201684913300005713Tropical Forest SoilAFVAVTGANRVAVIDVAKLAIESQIRAGTEPQGLIVR*
Ga0068866_1065427013300005718Miscanthus RhizosphereLTIGQGGTNIGFSRDGRTAFIAVRGANEVAVIDVAKLALASRIKAGTEPQGLIVR*
Ga0066903_10915793913300005764Tropical Forest SoilVKRVNIGQGGSNLGFSKDGKTAFIALTGADAVAVIDVAKLTLISQIKAGQQPQGLIVR*
Ga0075417_1011872223300006049Populus RhizosphereGKTAFIAVRGANEVAVIDMENLALVSRIRAGKEPQGLIVR*
Ga0075432_1021545223300006058Populus RhizosphereGGTNIGFSKDGKTAFIAVRGTNEVAVIDIATLALESRLRAGTEPQGLIVR*
Ga0066658_1058982213300006794SoilGTNIGFSKDGKTAFIAVTGANSVAVVDVQKLALESQIRAGREPQGLIVR*
Ga0066665_1166377523300006796SoilKDGKTAFIAVTGADTVAVVDVEKLALESQIKAGKEPQGLIVR*
Ga0066659_1036083733300006797SoilFIYGQSNKRVNIGEGGANIGFSKDGKTAFIALTGANAVAVIDVDKLTLISQIKAGKQPQGLIVW*
Ga0066659_1074725033300006797SoilDGKTAFIAVRGANDVAVIDIEKLVLASRIRAGTEPQGLIVR*
Ga0075428_10089602323300006844Populus RhizosphereNIGFSKDGKTAFIAVRGANDVAVIDMEKLALASRIKAGTEPQGLIVR*
Ga0075430_10029352113300006846Populus RhizosphereTFKEVKRLTIGLGGTNIGFGKDGRTAFIAVRGTNEVAVIDIDRLALESRIRAGTEPQGLIVR*
Ga0075433_1115168513300006852Populus RhizosphereNIGFSKDGKTAFIAVRGTNDVAVIDLARLALESRIRAGTEPQGLIVR*
Ga0075425_10257384313300006854Populus RhizosphereVKRLTIGLGGTNIGFSKDGKTAFIAVRGTNEVAVIDIATLALESRLRAGTEPQGLIVR*
Ga0075434_10036712233300006871Populus RhizosphereIAVRGANEVAVIDLVKLTLESRIRAGTEPQGLIVR*
Ga0075429_10001695213300006880Populus RhizosphereGSNIGFSKDGKTAFIAVRGANEVAVIDMETLALVSRIRAGKEPQGLIVR*
Ga0075424_10204852113300006904Populus RhizosphereAVRGTNEVAVIDIATLALESRLRAGTEPQGLIVR*
Ga0075424_10221865523300006904Populus RhizosphereRLTIGLGGTNIGFSKDGKTAFIAVRGANEVAVIDIATLALESRLRAGMEPQGLIVR*
Ga0075435_10080598613300007076Populus RhizosphereFIAVRGANEVAVIDLVKLTLESRIRAGTEPQGLIVR*
Ga0075435_10181703323300007076Populus RhizosphereAVRGANDVAVIDIEKLTLTSRIKAGTEPQGLIVR*
Ga0066710_10014925553300009012Grasslands SoilDGKTAFIAVRGANDVAVIDIEKLALASRIKAGTEPQGLIVR
Ga0075418_1140896513300009100Populus RhizosphereRTYKEVKRLAIGPGGTNIGFSKDGHTAFIAVTGANRVAVVDMRKLALESSIRAGKDPQGLIVR*
Ga0111538_1334651623300009156Populus RhizosphereGFSKDGKTAFIAVTGANSVAVVDVQKLALESRIKAGNEPQGLIVR*
Ga0126384_1002058173300010046Tropical Forest SoilLTIGQGGANIGFSKDGRTAFIAVRGANEVAVIDVDRLALGQRIRAGKEPQGLIVR*
Ga0134109_1007426413300010320Grasslands SoilKTAFIAVRGANDVAVIDIEKLVLAGRIRAGTEPQGLIVR*
Ga0126370_1172224413300010358Tropical Forest SoilRTAFIAVRGANDVAVIDVQKLALVGRIRAGTEPQGLIVR*
Ga0126377_1231287423300010362Tropical Forest SoilLGGSNIGFTKDGKTAFIAVRGTNSVAVIDVEKFAVVGHVKAGQEPQGLIVR*
Ga0126379_1036382713300010366Tropical Forest SoilQGGANIGFSKDGRTAFIAVRGANEVAVIDVDRLALGQRIRAGKEPQGLIVR*
Ga0126379_1362390513300010366Tropical Forest SoilAFIAVRGANEVAVIDVDRLALAQRIRAGKEPQGLIVR*
Ga0126381_10416946413300010376Tropical Forest SoilIAVRGANDVAVIDVQKLALVGRIRAGTEPQGLIVR*
Ga0126383_1112601313300010398Tropical Forest SoilKDGKTAFIAVRGANDVAVIDMEKLAVPSRIKAGTEPQGLIVR*
Ga0124844_116246413300010868Tropical Forest SoilGTTAFIAVRGANEVAVIDLATLTLASRIRAGTEPQGLIVR*
Ga0124844_116246513300010868Tropical Forest SoilSKDGTTAFIAVRGANEVAVIDLATLTLASRIRAGTEPQGLIVR*
Ga0124844_116401523300010868Tropical Forest SoilFSKDGTTAFIAVRGANEVAVIDLATLTLASRIRAGTEPQGLIVR*
Ga0124844_116401713300010868Tropical Forest SoilKDGTTAFIAVRGANEVAVIDLATLTLASRIRAGTEPQGLIVR*
Ga0137389_1125899013300012096Vadose Zone SoilKTGFVALTGANAVAVIDVQKLALVSQMKAGKEPQGLIVR*
Ga0137382_1057676013300012200Vadose Zone SoilDGRTAFIAVRGANDVAVIDVGTLALASRIRAGTEPQGLIVR*
Ga0137399_1148573923300012203Vadose Zone SoilTNIGFSKDGKTAFIAVTGANSVAVVDVQKLALESHIKAGKEPQGLIVR*
Ga0137362_1112105713300012205Vadose Zone SoilQGGTNIGFSKDGKVAFIAVTGANSVAVVDVQTLALESRIKAGKEPQGLIVR*
Ga0137380_1078221313300012206Vadose Zone SoilIGFSRDGKTAFIAVRGTNDVAVIDIEKLALASRIRAGTEPQGLIVR*
Ga0137380_1129521023300012206Vadose Zone SoilLARAGPNIGFSKDGKTAFIAVTGANAVAVIDIEKLALASQIQAGAAPQGLIVR*
Ga0137379_1052513913300012209Vadose Zone SoilKDGKTAFIAVTGANTVAVIDVQQLALASRIKAGKEPQGLIVR*
Ga0137379_1079132013300012209Vadose Zone SoilNVGFSKDGKTAFIAVTGANAVAVIDVEKLALARQIQAGAAPQGLIVR*
Ga0137379_1124375513300012209Vadose Zone SoilAFIAVRGANDVAVIDVEKLALASRISAGTEPQGLIVR*
Ga0137387_1020525823300012349Vadose Zone SoilKTAFIAVRGTNDVAVIDIEKLALASRIRAGTEPQGLIVR*
Ga0137387_1060057113300012349Vadose Zone SoilTAFIAVTGANAVAVIDIEKLALASQIQAGAAPQGLIVR*
Ga0137386_1050564223300012351Vadose Zone SoilDGKTAFIAVRGANDVAVIDIEKLVLAGRIRAGTEPQGLIVR*
Ga0137367_1015823413300012353Vadose Zone SoilTAFIAMTRADAVVVIDVEKLALASQITAGKAPQGLIVR*
Ga0137361_1076202633300012362Vadose Zone SoilAFIAVTGANSVAVIDVQKLALESQIKAGKEPQGLIVR*
Ga0137358_1065069813300012582Vadose Zone SoilVNIGEGGANIGFSKDGKTAFIALTGANAVAAIDVDKLTLISQIKAGKQPPGLIVR*
Ga0137395_1086104913300012917Vadose Zone SoilSRDGRTAFIAVRGANDVAVIDVGKLALASRIRAGTEPQGLIVR*
Ga0137394_1080800923300012922Vadose Zone SoilQGGANIGFSRDGKTAFIAVRGTNEVAVVDIENFALESRIRAGTEPQGLIVR*
Ga0137359_1107245333300012923Vadose Zone SoilIAVTGANSVAVVDVQKLALESHIKAGKEPQGLIVR*
Ga0137404_1001310313300012929Vadose Zone SoilAFIAVTGANAVAVIDVEKLALARQIQAGAAPQGLIVR*
Ga0126375_1159038023300012948Tropical Forest SoilTIGPGGTNIGFSKDGKTAFVAVTGANRVAVIDVAKLAIESQIRAGTEPQGLIVR*
Ga0134077_1055578813300012972Grasslands SoilSKDGKTAFIAVRGANDVAVIDIEKLALASRIKAGTEPQGLIVR*
Ga0134087_1079570913300012977Grasslands SoilVKRLTIGEGGSNIGFSRDGRTAFIAVRGANDVAVIDVGKLALASRIRAGTEPQGLIVR*
Ga0134075_1001584663300014154Grasslands SoilIGQGGANIGFSRDGKTAFIAVRGANDVAVIDIEKLVLASRIRAGTEPQGLIVR*
Ga0137405_137306653300015053Vadose Zone SoilKTAFIAVRGTNEVAVVDIENFALESRIRAGTEPQGLIVR*
Ga0137403_1086990023300015264Vadose Zone SoilGGSNIGFSRDGRTAFIAVRGANDVAVIDVGKLALASRIRAGTEPQGLIVR*
Ga0132256_10119988023300015372Arabidopsis RhizosphereGFSRDGRTAFIAVRGMNEVAVIDVATLALAGRIKAGTEPQGLIVR*
Ga0066655_1007337813300018431Grasslands SoilCQSINAGKFKEGKRLTIVQGGTNIGFRKDGKTAFIAVTGADTVAVVDVEKLALESQIKAGKEPQGLIVR
Ga0066655_1114031613300018431Grasslands SoilRDGRTAFIAVRGANDVAVIDVGKLALASRIRAGTEPQGLIVR
Ga0066667_1112053213300018433Grasslands SoilTAFIAVRGANDVAVIDIEKLVLAGRIRAGTEPQGLIVR
Ga0066662_1001752443300018468Grasslands SoilVRFIYGQSNKRVNIGEGGANIGFSKDGKTAFIALTGANAVAVIDVDKLTLISQIKAGKQPQGLIVR
Ga0066669_1007223943300018482Grasslands SoilTIGQGGTNIGFSKDGKTAFIAVTGANSVAVIDVQKLALESQIKAGKEPQGLIVR
Ga0066669_1037745613300018482Grasslands SoilDGKTAFIAVRGANEVAVIDLDKLTLASRITAGTEPQGLIVR
Ga0137417_139203323300024330Vadose Zone SoilMVQQDGKTAFIAVRGANDVVVIDIEKLVLAGRIRAGTEPQGLIVR
Ga0207654_1084738113300025911Corn RhizosphereFSQDGRTAFIAVRGANEVAVIDVDRLALAKRIKAGKEPQGLIVR
Ga0207686_1013963023300025934Miscanthus RhizosphereRTFTEVKRLTIGPGGTNIGFSRDGRTAFIAVRGANEVAVIDVAKLALAGRIKAGTEPQGLIVR
Ga0207640_1216011513300025981Corn RhizosphereGFSRDGRTAFIAVRGANDVAVIDVAKLALAGRIKAGTEPQGLIVR
Ga0209234_102971513300026295Grasslands SoilNIGFSRDGRTAFIAVRGANDVAVIDVGTLALASRIRAGTEPQGLIVR
Ga0209235_113805623300026296Grasslands SoilVRFIYGQSNKRVNIGEGGANIGFSKDGKTAFIALTGANAVAVIDVDKLTLISQIKAGKQPQGLIVW
Ga0209468_109302413300026306SoilKDGKTAFIAVRGANDVAVIDIEKLALATRIKAGTEPQGLIVR
Ga0209686_108507613300026315SoilGEGGANIGFSRDGRTAFIAVRGANDVAVIDVGKLALASRIRAGTEPQGLIIR
Ga0209471_105070233300026318SoilLTIGEGGANIGFSRDGRTAFIAVRGANDVAVIDVGTLALASRIRAGTEPQGLIVR
Ga0209801_103233633300026326SoilTVGQGGSNIGFSKDGKTAFIAVRGANDVAVIDIEKLALATRIKAGTEPQGLIVR
Ga0209473_115408613300026330SoilRLTIGEGGANIGFSRDGRTAFIAVRGANDVAVIDVGTLALASRIRAGTEPQGLIVR
Ga0209803_124005123300026332SoilKTAFIAVTGANTVAVIDVQQLALASRIKAGKEPQGLIVR
Ga0209806_108834823300026529SoilGEGGSNIGFSRDGRTAFIAVRGANDVAVIDVGTLALASRIRAGTEPQGLIVR
Ga0209157_101627513300026537SoilIAVRGANDVAVIDIEKLALATRIKAGTEPQGLIVR
Ga0209056_10003565193300026538SoilVRFIYGLSNKRVNIGEGGANIGFSKDGKTAFIALTGANAVAVIDVDKLTLISQIKAGKQPQGLIVW
Ga0209056_1015683113300026538SoilKTAFIAVRGANDVAVIDIEKLALANRIKAGTEPQGLIVR
Ga0209799_107668523300027654Tropical Forest SoilIAVRGANEVAVIDLATLALASRIRAGTEPQGLIVR
Ga0209073_1020233323300027765Agricultural SoilAIGPGGSNIGFSKDGRTAFIALSGANAVAVIDVKKLAPAGQIRTGVAPQGLIVR
Ga0209701_1057977413300027862Vadose Zone SoilIGSGGSNIGFSKDGKTAFIAVREADAVAVIDVEKLALASQITAGKAPQGLIVR
Ga0209465_1001130813300027874Tropical Forest SoilGPGGTNIGFSKDGKTAFIAVTGANTVAVIDLPKWALEMQIKAGKEPQGLIVR
Ga0307312_1045937413300028828SoilGKTAFIAVRGANAVAVIDIEKLALASRIRAGTEPQGLIVR
Ga0307278_1023011523300028878SoilKTAFIAVRGANDVAVIDIEKLRLASRIRAGTEPQGLIVR
Ga0307498_1043945813300031170SoilDGKTAFIAVTGANSVAVVDVQKLALEGQIKAGKEPQGLIVG
Ga0310886_1079713523300031562SoilRLTIGQGGTNIGFSQDGRTAFIAVRGANEVAVIDVDRLALAKRIKAGKEPQGLIVR
Ga0307469_1253434513300031720Hardwood Forest SoilGFSKDGKTAFVAVRGANDVAVIDVEKLTLASRIKAGREPQGLIVR
Ga0318501_1027899013300031736SoilLTIGLGGTNIGFSKDGKTAFIAVTGANAVAVVDVAKLALETHITAGKEPQGLIVR
Ga0307468_10003353313300031740Hardwood Forest SoilTAFIALRDANAVAVVDMQKLAFEGRIAAGKEPQGLIVR
Ga0318503_1015305913300031794SoilGKTAFVAVTGANRVAVIDVAKLALESQIRAGTEPQGLIVR
Ga0307473_1019326013300031820Hardwood Forest SoilIGFSKDGKTAFIAVRGANDVAVIDIEKLALATRIKAGTEPQGLIVR
Ga0307473_1025994423300031820Hardwood Forest SoilAFIALTGANAVAVIDMETLAPAGQIRAGAAPQGLIVR
Ga0310891_1024742823300031913SoilTIGQGGTNIGFSKDGKTAFIAVTGANSVAVVDVQKLTLESRIQAGKEPQGLIVR
Ga0306922_1121583523300032001SoilSKDGKTAFIAVTGANTVAVVDVAKLALETHITAGKEPQGLIVR
Ga0310906_1089927213300032013SoilQGGTNIGFSKDGKTAFIAVTGANSVAVVDVQKLTLESRIQAGKEPQGLIVR
Ga0318524_1035828313300032067SoilTAFVAVTGANRVAVIDVAKLALESQIRAGTEPQGLIVR
Ga0310895_1059290823300032122SoilFIAVRGANEVVVIDVDRLALAKRIKAGKEPQGLIVR
Ga0307470_1055048423300032174Hardwood Forest SoilFIAVRGANDVAVIDMEKLALASRIKAGTEPQGLIVR
Ga0307471_10119029313300032180Hardwood Forest SoilGKTAFIAVRGANDVAVIDIEKLALTSRIKAGTEPQGLIVR
Ga0307472_10263388513300032205Hardwood Forest SoilAFIAVRGANDVAVIDVDKLALASRIRAGTEPQGLIVR
Ga0310896_1027913413300032211SoilTIGQGGTNIGFSQDGRTAFIAVRGANEVAVIDVDRLALAKRIKAGKEPQGLIVR
Ga0306920_10284390913300032261SoilFSKDGKTAFIAVRGANDVAVIDMEKLALASRIKAGTEPQGLIVR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.