Metagenome / Metatranscriptome Family F059851

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059851
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	66 residues
Representative Sequence	MFDRVTEVISLVLGALALGYLVYEIDRRQRKLHEIWDVLDGEDAIITDSLEDMVEKGELRPFAGAALA
Number of Associated Samples	106
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.96 %
% of genes near scaffold ends (potentially truncated)	27.82 %
% of genes from short scaffolds (< 2000 bps)	81.95 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.827 % of family members)
Environment Ontology (ENVO)	Unclassified (23.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.361 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.58% β-sheet: 0.00% Coil/Unstructured: 35.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF00122	E1-E2_ATPase	12.03
PF00702	Hydrolase	8.27
PF02826	2-Hacid_dh_C	0.75
PF01042	Ribonuc_L-PSP	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	12.03
COG2216	K+ transport ATPase, ATPase subunit KdpB	Inorganic ion transport and metabolism [P]	12.03
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	12.03
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	99.25 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	51.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	45.11 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	51.13 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	45.11 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	51.13 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	45.11 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	51.13 %
Methylomagnum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum	15.79 %
Methylococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus	3.76 %
Methylocaldum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	2.26 %
Methyloterricola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methyloterricola	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	51.13 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	15.79 %
Methylococcus capsulatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → Methylococcus capsulatus	3.76 %
unclassified Methylocaldum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum → unclassified Methylocaldum	1.50 %
Methyloterricola oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methyloterricola → Methyloterricola oryzae	0.75 %
Unclassified	root	N/A	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	51.13 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	15.79 %
Methylococcus capsulatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → Methylococcus capsulatus	3.76 %
Methylocaldum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum → unclassified Methylocaldum → Methylocaldum sp.	1.50 %
Methyloterricola oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methyloterricola → Methyloterricola oryzae	0.75 %
Unclassified	root	N/A	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10031516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1094	Open in IMG/M
3300001545\|JGI12630J15595_10042838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → Methylococcus capsulatus	915	Open in IMG/M
3300003219\|JGI26341J46601_10087253	All Organisms → cellular organisms → Bacteria → Proteobacteria	924	Open in IMG/M
3300003505\|JGIcombinedJ51221_10009009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → Methylococcus capsulatus	3190	Open in IMG/M
3300003505\|JGIcombinedJ51221_10251097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → Methylococcus capsulatus	719	Open in IMG/M
3300004080\|Ga0062385_10022659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	2393	Open in IMG/M
3300005171\|Ga0066677_10058336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1951	Open in IMG/M
3300005178\|Ga0066688_10992398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	512	Open in IMG/M
3300005181\|Ga0066678_10079717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1939	Open in IMG/M
3300005181\|Ga0066678_10952263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	559	Open in IMG/M
3300005187\|Ga0066675_10041863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	2766	Open in IMG/M
3300005436\|Ga0070713_101348971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300005445\|Ga0070708_100762954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	909	Open in IMG/M
3300005468\|Ga0070707_100229446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum → unclassified Methylocaldum → Methylocaldum sp.	1808	Open in IMG/M
3300005468\|Ga0070707_100591433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum → unclassified Methylocaldum → Methylocaldum sp.	1072	Open in IMG/M
3300005468\|Ga0070707_101727541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300005471\|Ga0070698_101844989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300005540\|Ga0066697_10068705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	2031	Open in IMG/M
3300005557\|Ga0066704_10371754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	955	Open in IMG/M
3300005559\|Ga0066700_10143731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1610	Open in IMG/M
3300005559\|Ga0066700_10455479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → Methylococcus capsulatus	897	Open in IMG/M
3300005764\|Ga0066903_100097773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	3946	Open in IMG/M
3300006755\|Ga0079222_12501190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	518	Open in IMG/M
3300006796\|Ga0066665_10129643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	1890	Open in IMG/M
3300006796\|Ga0066665_11223712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	574	Open in IMG/M
3300006854\|Ga0075425_102588249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	561	Open in IMG/M
3300007076\|Ga0075435_101957875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	514	Open in IMG/M
3300009012\|Ga0066710_100106115	All Organisms → cellular organisms → Bacteria → Proteobacteria	3777	Open in IMG/M
3300009012\|Ga0066710_101051651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1258	Open in IMG/M
3300009038\|Ga0099829_10585841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	927	Open in IMG/M
3300009089\|Ga0099828_11461490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300009137\|Ga0066709_100140704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3062	Open in IMG/M
3300009137\|Ga0066709_101359220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1037	Open in IMG/M
3300009143\|Ga0099792_10018570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	3066	Open in IMG/M
3300009143\|Ga0099792_10724076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	646	Open in IMG/M
3300010360\|Ga0126372_11400101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	732	Open in IMG/M
3300011270\|Ga0137391_10884319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	732	Open in IMG/M
3300011271\|Ga0137393_11409919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300012202\|Ga0137363_10505480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1015	Open in IMG/M
3300012202\|Ga0137363_11341516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	604	Open in IMG/M
3300012206\|Ga0137380_11580347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300012207\|Ga0137381_10367811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1253	Open in IMG/M
3300012207\|Ga0137381_10587438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	970	Open in IMG/M
3300012208\|Ga0137376_10967271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	730	Open in IMG/M
3300012209\|Ga0137379_10695393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	922	Open in IMG/M
3300012349\|Ga0137387_11164925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300012359\|Ga0137385_10945044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M
3300012359\|Ga0137385_11158368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300012362\|Ga0137361_10527410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1084	Open in IMG/M
3300012363\|Ga0137390_11131281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	732	Open in IMG/M
3300012582\|Ga0137358_10233946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1252	Open in IMG/M
3300012685\|Ga0137397_10900797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	656	Open in IMG/M
3300012917\|Ga0137395_10403167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	979	Open in IMG/M
3300012922\|Ga0137394_10884934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	746	Open in IMG/M
3300012923\|Ga0137359_10160763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2004	Open in IMG/M
3300012923\|Ga0137359_10164844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → Methylococcus capsulatus	1978	Open in IMG/M
3300012927\|Ga0137416_10014103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	4906	Open in IMG/M
3300015242\|Ga0137412_11249064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300016319\|Ga0182033_10056468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylocaldum	2691	Open in IMG/M
3300016341\|Ga0182035_10395348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1160	Open in IMG/M
3300018433\|Ga0066667_10218168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1418	Open in IMG/M
3300020579\|Ga0210407_10001232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24692	Open in IMG/M
3300020579\|Ga0210407_10251448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	1377	Open in IMG/M
3300020579\|Ga0210407_10296870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1261	Open in IMG/M
3300020580\|Ga0210403_10054936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3186	Open in IMG/M
3300020580\|Ga0210403_11374414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300020583\|Ga0210401_11424476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300021178\|Ga0210408_11097334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300021361\|Ga0213872_10187640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	891	Open in IMG/M
3300021372\|Ga0213877_10248354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300021432\|Ga0210384_10478096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	1122	Open in IMG/M
3300021432\|Ga0210384_10563255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1025	Open in IMG/M
3300021432\|Ga0210384_10759633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	866	Open in IMG/M
3300021439\|Ga0213879_10028703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1385	Open in IMG/M
3300021439\|Ga0213879_10118474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	752	Open in IMG/M
3300021444\|Ga0213878_10337548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300021475\|Ga0210392_10165309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1523	Open in IMG/M
3300021476\|Ga0187846_10101450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1238	Open in IMG/M
3300021478\|Ga0210402_10712968	All Organisms → cellular organisms → Bacteria → Proteobacteria	926	Open in IMG/M
3300021479\|Ga0210410_11664825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300022507\|Ga0222729_1017675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	817	Open in IMG/M
3300022510\|Ga0242652_1047565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	536	Open in IMG/M
3300022525\|Ga0242656_1067598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	649	Open in IMG/M
3300022533\|Ga0242662_10336298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300022722\|Ga0242657_1054988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	884	Open in IMG/M
3300025915\|Ga0207693_10424142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	1040	Open in IMG/M
3300025928\|Ga0207700_11321328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	642	Open in IMG/M
3300026326\|Ga0209801_1312590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300026555\|Ga0179593_1057092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	2375	Open in IMG/M
3300026557\|Ga0179587_10081473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1926	Open in IMG/M
3300027583\|Ga0209527_1086087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	706	Open in IMG/M
3300027603\|Ga0209331_1013258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2146	Open in IMG/M
3300027651\|Ga0209217_1007256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	3680	Open in IMG/M
3300027701\|Ga0209447_10187260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300027748\|Ga0209689_1373830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300027812\|Ga0209656_10028883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	3309	Open in IMG/M
3300027903\|Ga0209488_10288683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1226	Open in IMG/M
3300028536\|Ga0137415_10039456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	4621	Open in IMG/M
3300028536\|Ga0137415_11378230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	526	Open in IMG/M
3300029636\|Ga0222749_10121909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	1246	Open in IMG/M
3300029636\|Ga0222749_10657041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300031231\|Ga0170824_104968090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methyloterricola → Methyloterricola oryzae	1129	Open in IMG/M
3300031543\|Ga0318516_10061389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2068	Open in IMG/M
3300031543\|Ga0318516_10270086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	983	Open in IMG/M
3300031544\|Ga0318534_10169205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1263	Open in IMG/M
3300031545\|Ga0318541_10022839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	3014	Open in IMG/M
3300031668\|Ga0318542_10356283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	753	Open in IMG/M
3300031679\|Ga0318561_10113235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	1436	Open in IMG/M
3300031719\|Ga0306917_11469154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	525	Open in IMG/M
3300031723\|Ga0318493_10597961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	615	Open in IMG/M
3300031740\|Ga0307468_102228196	Not Available	531	Open in IMG/M
3300031748\|Ga0318492_10727320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300031770\|Ga0318521_10137349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	1379	Open in IMG/M
3300031779\|Ga0318566_10064785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	1758	Open in IMG/M
3300031793\|Ga0318548_10568356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300031805\|Ga0318497_10116701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	1442	Open in IMG/M
3300031879\|Ga0306919_10308531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1202	Open in IMG/M
3300031890\|Ga0306925_10216792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	2064	Open in IMG/M
3300031896\|Ga0318551_10134892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1339	Open in IMG/M
3300031942\|Ga0310916_11308198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300031942\|Ga0310916_11363546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300031946\|Ga0310910_10014861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	4976	Open in IMG/M
3300031946\|Ga0310910_11268524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300031946\|Ga0310910_11579135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300031954\|Ga0306926_12833193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	523	Open in IMG/M
3300031962\|Ga0307479_11448610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300032060\|Ga0318505_10102151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1299	Open in IMG/M
3300032066\|Ga0318514_10634964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300032090\|Ga0318518_10092026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1505	Open in IMG/M
3300032174\|Ga0307470_10114594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1577	Open in IMG/M
3300032205\|Ga0307472_100048264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	2632	Open in IMG/M
3300032205\|Ga0307472_102091436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300032261\|Ga0306920_100222952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	2813	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.74%
Host-Associated	Host-Associated	2.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.74%
Aquatic	Environmental → Aquatic	3.01%
Plants	Host-Associated → Plants	2.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.98%
Freshwater	Environmental → Aquatic → Freshwater	3.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.26%
Cave	Environmental → Terrestrial → Cave	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.20%
Loam	Environmental → Terrestrial → Soil → Loam	12.78%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.26%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.07%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.02%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.02%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.76%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.01%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	3.01%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100315161	3300001545	Forest Soil	MLDRFGEVVSLVLGVLAIGYLVYEIDRRQRKLHDIWDVLDGEDAVLTAALEDMVERGELQPFA
JGI12630J15595_100428381	3300001545	Forest Soil	MFDRVGEIFSMVLGALAVGYLVFEIDRRRRKLHEIFDVLDADDADITARLEDMVESGELQPYTGATLA*
JGI26341J46601_100872532	3300003219	Bog Forest Soil	MFDRVTEVFSLVLGALALGYLVYEIDRRQRKLHDIWNVLDGEDAILTASLEDMVESGELQPYAGATLA*
JGIcombinedJ51221_100090091	3300003505	Forest Soil	MFDRVTEIMSLVLGALALGYLVYEIDRRQRKLHDIWDVLDGEDAIITGTLEDMVKKGELKPYAEAALA*
JGIcombinedJ51221_102510971	3300003505	Forest Soil	MFDRVGEVMSLILGALAVGYLVYEVERRRRKLHELWDVLDDDDAVITAALQDMVESGELQPFAGASLA*
Ga0062385_100226592	3300004080	Bog Forest Soil	MFDRFTEVMSLVLSALALGYLVYEIDRRQRKLHDIWDVLDGEDAVITDTLEDMVERGELRPFAGTALA*
Ga0066677_100583363	3300005171	Soil	MFDRAGEIFSMVLGALALGYIAYEIERRRRLLHDLWDVLDGEDAIITAALEDLVESGELLPYTGATLV*
Ga0066688_109923981	3300005178	Soil	MLDKVGEVVSLVLGALAVGYLFYEIERRRRRLHDLWDVLDGEDAVITAVLEDMVESGELLPYTKATLA*
Ga0066678_100797172	3300005181	Soil	MFDRAGEIFSMVLGALALGYIAYEIERRRRLLHDLWDVLDGEDAIITAALEDLVESGELLPYTGATLA*
Ga0066678_109522631	3300005181	Soil	MFDRVTEVISLVLGALAIGYLVYEIDRRQRKLHDIWNVLDGEDALITDSLEDMVESGELRPFAGAALA*
Ga0066675_100418632	3300005187	Soil	MFDRAGEIFSMVLGALALGYIAYEIERRRLLHDLWDVLDGEDAIITAALEDLVESGELLPYTGATLV*
Ga0070713_1013489712	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RITEVISLVLGALAVGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVERDELRPFAGAALA*
Ga0070708_1007629542	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MFDRVGEVMSLILGALAVGYLVYEVERRRRKLHELWDVLDDDDAVITAALQDMVESGELQPFAGAMLA*
Ga0070707_1002294462	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MFDRITEVISLVLGALAVGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVERDELRPFAGAALA*
Ga0070707_1005914332	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MFDRVGEVMSLILGALAVGYLVYEIERRRRKLHELWDVLDDDDAVITAALQDMVESGELQPFAGASLA*
Ga0070707_1017275412	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLDRFGEVVSLVLGVLAIGYLVYEIDRRQRKLHDIWDVLDGEDAVLTAALEDMVESGELQPFAGAALA*
Ga0070698_1018449892	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLDRFGEVVSLVLGVLAIGYLVYEIDRRQRKLHDIWDVLDGEDAVLTAALEDMVERGELQPFAGAALA*
Ga0066697_100687052	3300005540	Soil	MFDRAGEIFSMVLGALALGYIAYEIERRRRLLHDLWDVLDGEDAIITAALEDLVESGELLPYTGETLA*
Ga0066704_103717542	3300005557	Soil	MFDRVTEVISLVLGVLALGYLAYEIDRRQRKLHEIWDVLDGEDAVITGVLEDMVASGELKPYAEAALA*
Ga0066700_101437312	3300005559	Soil	MLDRVGEMVSLVLGALAVGYLFYEIERRRRRLHDLWDVLDGEDAVITAVLEDMVESGELLPYTKATLA*
Ga0066700_104554792	3300005559	Soil	MFDRVTEVISLVLGALAIGYLVYELDRRQRKLHDIWDVLDGEDALITDSLEDMVESGELRPFAGAALA*
Ga0066903_1000977735	3300005764	Tropical Forest Soil	MFDRVTEVISLVLGVLALGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVENGELRPFAGAALA*
Ga0079222_125011901	3300006755	Agricultural Soil	MFDRVTEVISLVLGALALGYLVYEIDRRQRKLHEIWDVLDGEDAVITDTLEDMVEKGELLPHAGATLA*
Ga0066665_101296432	3300006796	Soil	MLDRVGEVVSLVLGALALGYLFYEIERRRRKLHDLWDVLDGEDAIITAALEDLVESGELLPYTGATLV*
Ga0066665_112237122	3300006796	Soil	MFDRVGEIFSLVLGALAVRYLVFEIDRRQRRLHEIFDVLDADDADITARLEDMVESGELQPHTGATLA*
Ga0075425_1025882492	3300006854	Populus Rhizosphere	MFDRVGEVMSLVLGALAVGYLVYEIERRRRKLHELWDVLDDDDAVITAALQDMVERGELQPFAGATLA*
Ga0075435_1019578751	3300007076	Populus Rhizosphere	MFDRVGEVMSLVLGALAVGYLVYEIERRRRKLHELWDVLDDDDAVITTALQDMVESGELQPFAGATLA*
Ga0066710_1001061154	3300009012	Grasslands Soil	MFDRVGEVMSLILGALAVGYLVYEIERRRRKLHELWDVLDDDDAVITAALQDMVERGELQPFAGATLA
Ga0066710_1010516512	3300009012	Grasslands Soil	MFDRVGEIFSLVLGALAVGYLVFEIDRRQRRLHEIFDVLDADDAEITARLEDMVESGELQPYTGATLA
Ga0099829_105858412	3300009038	Vadose Zone Soil	MFDRVTEVFSLVLGVLALGYLAYEIDRRQRKLHEIWDVLDGEDAIITGVLEEMVASGELKPYAEAALA*
Ga0099828_114614902	3300009089	Vadose Zone Soil	MFDRVTEVFSLVLGVLALGYLAYEIDRRQRKLHEIWDVLDGEDAIITGVLEDMVASGELKPYAE
Ga0066709_1001407043	3300009137	Grasslands Soil	MSLVLGALAVGYLVYEIERRRRKLHELWDVLDDDDAVITAALQDMVERGELQPFAGATLA
Ga0066709_1013592201	3300009137	Grasslands Soil	MFDRVGEIFSLVLGALAVGYLVFEIDRRQRRLHEIFVVVDADDAEITARLEGVVESGELQPYTGATLA*
Ga0099792_100185702	3300009143	Vadose Zone Soil	MFDRVTEVISLVLGALAIGYLVYEIDRRQRKLHDIWDVLDGEDALITDSLEDMVESGELRPFAGAALA*
Ga0099792_107240761	3300009143	Vadose Zone Soil	MFDRVGEVMSLVLGALAVGYLVYEIERRRRKLHELWDVLDDEDAVITAALQDMVESGELRPFAGATLA*
Ga0126372_114001012	3300010360	Tropical Forest Soil	MFDRIGEIFSMVLGALAVGYLVFEIDRRRRKLHDIFDVLDADDAYITARLEDMVASGELQPYAGATLA*
Ga0137391_108843192	3300011270	Vadose Zone Soil	LGVLAIGYLVYEIDRRQRKLHDIWDVLDGEDAVLTAALEDMVERGELQPFAGAALA*
Ga0137393_114099192	3300011271	Vadose Zone Soil	MLDRIGEVVSLVLGVLAIGYLVYEIDRRQRKLHDIWDVLDGEDAVLTAALEDMVERGELQPFAGAALA*
Ga0137363_105054803	3300012202	Vadose Zone Soil	MFDRIGEVMSVILGALAVGYLVYEIERRRRKLHELWDVLDDDDAVITAALQDMVESGELQPFAGATLA*
Ga0137363_113415161	3300012202	Vadose Zone Soil	MFDRVGEIFSMVLGALAVGYLVFEIDRRRRKLHEIFDVLDADDADITARLEAMVESGELQ
Ga0137380_115803471	3300012206	Vadose Zone Soil	MPERVGDIISLVLGALAVGYIFYEIDRRQRKLHELWDVLDEEDALLTGALEDMVESGE
Ga0137381_103678111	3300012207	Vadose Zone Soil	MFDRVTDVISLVLGAFALGYLVYEIDRRQRKLHEIWDVLDGEDAIITDVLEDMVERGELQPYAGAALA*
Ga0137381_105874382	3300012207	Vadose Zone Soil	MPERVGDIISLVLGALAVGYIFYEVDRRQRKLHELWDVLDEEDALLTGALEDMVESGELQSHTGATLA*
Ga0137376_109672712	3300012208	Vadose Zone Soil	MFDRAGEIFSMVVGALALGYIAYEIERRRRLLHDLWDVLDGEDAIITAALEDLVESGELLPYTGATLA*
Ga0137379_106953933	3300012209	Vadose Zone Soil	MFDRVTDVISLVLGALALGYLVYEIDRRQRKLHEIWDVLDGEDAIITDVLEDMVERGELQPYAGAALA*
Ga0137387_111649252	3300012349	Vadose Zone Soil	MPERVGDIISLVLGALAVGYIFYEIDRRQRKLHELWDVLDEEDALLTGALEDMVESGELQPYTGATLA*
Ga0137385_109450441	3300012359	Vadose Zone Soil	MPERVGDIISLVLGALAVGYIFYEIDRRQRKLHELWDVLDEEDALLTGALEDMVESGELQSHTGATLA
Ga0137385_111583681	3300012359	Vadose Zone Soil	MFDRVTDVISLVLGALALGYLVYEIDRRQRKLHEIWDVLDGEDAIITDVLEDMVERGELQPY
Ga0137361_105274103	3300012362	Vadose Zone Soil	MFDRVGEVMSLVLGALAVGYLVYEIERLRRKLHELWDVLDDEDAVITAALQDMVESGELRPFAGATLA*
Ga0137390_111312812	3300012363	Vadose Zone Soil	MLDRLGEVVSLVLGVLAIGYLVYEIDRRQRKLHDIWDVLDGEDAVLTAALEDMVERGELQPFAGAALA*
Ga0137358_102339464	3300012582	Vadose Zone Soil	MFDRVTEVISLVLGALAIGYLVHEIDRRQRKLHDIWDVLDGEDALITDSLEDMVESGELRPFAGAALA*
Ga0137397_109007972	3300012685	Vadose Zone Soil	MFDRVGEVMSLVLGALAVGYLVYEIERRRRKLHDLWDVLDDDDAVITAALQDMVESGELQPFAGATLA*
Ga0137395_104031673	3300012917	Vadose Zone Soil	MFDRVTEVISLVLGALAIGYLVYEIDRRQRKLHDIWDVLDGEDALITDSLEDMVESGELRPFAGA
Ga0137394_108849342	3300012922	Vadose Zone Soil	MFDRVGEVMSLILGALAVGYLVYEIERRRRKLHELWDVLDDDDAVITAALQDMVESGELQPFAGATLA*
Ga0137359_101607632	3300012923	Vadose Zone Soil	MFDRFTEVVSLVLGALAVAYLVYEIDRRQRKLHDLWDVLDGEDAIITNTLEDMVERGELLPYAGATLA*
Ga0137359_101648442	3300012923	Vadose Zone Soil	MFDRAGEIFSMVLGALALGYIAYEIERRRRLLHDLWDVLDGEDAIITAALEGLVESGELLPYTGETLA*
Ga0137416_100141032	3300012927	Vadose Zone Soil	MFDRVTEVISLVLGALAIGYLVYEIDRRQRKLRDIWDVLDGEDALITDSLEDMVESGELRPFAGAALA*
Ga0137412_112490641	3300015242	Vadose Zone Soil	LVLGALAIGYLVYEIDRRQRKLHDIWDVLDGEDALITDSLEDMVESGELRPFAGAALA*
Ga0182033_100564682	3300016319	Soil	GRRDMFDRVTEVISLVLGALALGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVEKGELRPFAGAALA
Ga0182035_103953481	3300016341	Soil	MFDRVTEVISLVLGALALGYLVYALDRRQRKLHEIWDVLDGEDAIITNSLEDMVENGE
Ga0066667_102181682	3300018433	Grasslands Soil	MFDRAGEIFSMVLGALALGYIAYEIERRRRLLHDLWDVLDGEDAIITAALEDLVESGELLPYTGATLV
Ga0210407_100012323	3300020579	Soil	MFDRVGEVMSLILGALAVGYLVYEVERRRRKLHELWDVLDDDDAVITAALQDMVESGELQPFAGASLA
Ga0210407_102514484	3300020579	Soil	MFDRVTEIMSLVLGALALGYLVYEIDRRQRKLHDIWDVLDGEDAIITGTLEDMVEKGELKPYAEAALA
Ga0210407_102968701	3300020579	Soil	MFDRVGEIFSMVLGALAVGYLVFEIDRRRKLHEIFDVLDADDADITARLEDIVESGELQPYTGATLA
Ga0210403_100549362	3300020580	Soil	MFDRVTEIMSLVLGALALGYLVYEIDRRQRKLHDIWDVLDGEDAIITGTLEDMVKKGELKPYAEAALA
Ga0210403_113744142	3300020580	Soil	MFDRVTEVISLVLGVLAVGYLVYEIDRRQRKLHDIWDVLDGEDALITDSLEDMVESGELRPFAGAALA
Ga0210401_114244761	3300020583	Soil	MFDRVTEVISLVLGALAIGYLVYEIDRRQRRLHDIWDVLDGEDALITDSLEDMVESGELR
Ga0210408_110973341	3300021178	Soil	MFDRITEVISLVLGALAVGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVERDELRPFAGAALA
Ga0213872_101876402	3300021361	Rhizosphere	VISLVLGGLALGYIVYEIERRRRKLHDLWDVLDEEDAIITAALEDMVTSGELKPYAGTTL
Ga0213877_102483542	3300021372	Bulk Soil	MFDRVTEIISLVLGALAVGYLVYEIDRRQRKLRDIWDVLDGEDALITQALEDMVESGELR
Ga0210384_104780963	3300021432	Soil	MFDRITEVISLVLGALAVGYLVYEIDRRQRKLHDIWDVLDGEDALITDSLEDMVESGELRPFAGAALA
Ga0210384_105632552	3300021432	Soil	MLDRFGEVVSLVLGVLAIGYLVYEIDRRQRKLHDIWDVLDGEDAVLTAALEDMVERGELQPFAGAALA
Ga0210384_107596331	3300021432	Soil	MFDRFTEVVSLVLGALAVAYLVYEIDRRQRKLHDLWDVLDGEDAVITNTLEDMVERGELLPYAGATLA
Ga0213879_100287031	3300021439	Bulk Soil	TEVLSLVLGALAVGYLVYEIDRRQRKLHDIWDVLDGEDALITQALEDMVESGELRPFLGTALA
Ga0213879_101184741	3300021439	Bulk Soil	LFDRAGRVISLVLGGLALGYIVYEIERRRRKLHDLWDVLDEEDAIITAALEDMVTSGELQPHAGTTLD
Ga0213878_103375482	3300021444	Bulk Soil	MFDRVTEVLSLVLGALAVGYLVYEIDRRQRKLRDIWDVLDGEDALITQALEDMVESGELRPFLGTALA
Ga0210392_101653092	3300021475	Soil	MFDRVGEVMSLILGALAVGYLVYEVERRRRKLHELWDVLDDDDAVITAALQDMVESGELQPFAGALLA
Ga0187846_101014502	3300021476	Biofilm	MLDRVGEVISLVLGALALGYLVYEIERRRQRLHDLWDVLDGEDAALTASLEELVNSGELLPYTRATLA
Ga0210402_107129683	3300021478	Soil	MFDRFTEVVSLVLGALAVGYLLYEIDRRQRKLHDIWDVLDGEDALITDSLEDMVESGELRPFAGAALA
Ga0210410_116648252	3300021479	Soil	MFDRVGEVMSLVLGALAVGYLVYEIERRRRKLHELWDVLDDDDAVITAALQDMVESGELQPFAGATLA
Ga0222729_10176752	3300022507	Soil	MFDRVGEVMSLILGALAVGYLVYEIERRRRKLHELWDVLDDEDAVITAALQDMVESGELRPFAGATLA
Ga0242652_10475651	3300022510	Soil	MFDRVGEVMSLILGALAVGYLVYEVERRRRKLHELWDVLDDDDAVITAALQDMVESGELRPFAGATLA
Ga0242656_10675982	3300022525	Soil	MFDRVGEVMSLILGALAVGYLVYEVERRRRKLHELWDVLDDEDAVITAALQDMVESGELRPFAGATLA
Ga0242662_103362982	3300022533	Soil	LDRIGEVISLVLGALALGYLVYEIDRRQRKLHDIWDVLDGEDAVLTAALEDMVESGELQPFAGVALA
Ga0242657_10549881	3300022722	Soil	MFDRVGEVMSLILGALAVGYLVYEVERRRRKLHELWDVLDDDDAVITAALQDMVESGELQ
Ga0207693_104241421	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	IFSMVLGALAVGYLVFEIDRRRRKLHEIFDVLDADDADITARLEDMVERGELQPFAGAAL
Ga0207700_113213282	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	RITEVISLVLGALAVGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVERDELRPFAGAALA
Ga0209801_13125902	3300026326	Soil	MFDRAGEIFSMVLGALALGYIAYEIERRRRLLHDLWDVLDGEDAIITAALEDLVESGELLPYTGATLA
Ga0179593_10570925	3300026555	Vadose Zone Soil	MFDRVTEVISLVLGALAIGYLVYEIDRRQRKLHDIWDVLDGEDALITDSLEDMVESGELRPFAGAALA
Ga0179587_100814731	3300026557	Vadose Zone Soil	FGEVVSLVLGVLAIGYLVYEIDRRQRKLHDIWDVLDGEDAVLTAALEDMVERGELQPFAGAALA
Ga0209527_10860871	3300027583	Forest Soil	MFDRFTEVVSLVLGALAVAYLVYEIDRRQRKLHDLWDVLGGEDALITNTLEDMVERGELLPYAGATLA
Ga0209331_10132583	3300027603	Forest Soil	MFDRVGEIFSIVLGALAVGYLLFEIDRRLRKLHEIFDVLDADDADITARLEDMVESGELQPYTGATLA
Ga0209217_10072563	3300027651	Forest Soil	MFDRVGEIFSMVLGALAVGYLVFEIDRRRRKLHEIFDVLDADDADITARLEDMVESGELQPYTGATLA
Ga0209447_101872602	3300027701	Bog Forest Soil	MFDRFTEVMSLVLSALALGYLVYEIDRRQRKLHDIWDVLDGEDAVITDTLEDMVERGELRPFAGTALA
Ga0209689_13738302	3300027748	Soil	MFDRVTEVISLVLGALAIGYLVYELDRRQRKLHDIWDVLDGEDALITDSLEDMVESGELRPFAGAALA
Ga0209656_100288834	3300027812	Bog Forest Soil	MFDRVTEVFSLVLGALALGYLVYEIDRRQRKLHDIWNVLDGEDAILTASLEDMVESGELQPYAGATLA
Ga0209488_102886833	3300027903	Vadose Zone Soil	MFDRVGEVMSLVLGALAVGYLVYEIERRRRKLHELWDVLDDEDAVITAALQDMVESGELRPFAGATLA
Ga0137415_100394565	3300028536	Vadose Zone Soil	MFDRVTEVISLVLGALAIGYLVYEIDRRQRKLRDIWDVLDGEDALITDSLEDMVESGELRPFAGAALA
Ga0137415_113782302	3300028536	Vadose Zone Soil	MFDRVGEVMSLVLGALAVGYLVYEIERRRRKLHELWDVLDDEDAVITAALQDMVESGELQPFAGATPD
Ga0222749_101219091	3300029636	Soil	MFDRVTEVISLVLGALAIGYLVYEIDRRQRRLHDIWDVLDGEDALITDSLEDMVESGELRPFAGAALA
Ga0222749_106570411	3300029636	Soil	LDRFGEVVSLVLGVLAIGYLVYEIDRRQRKLHDIWDVLDGEDAVLTAALEDMVERGELQPFAGAALA
Ga0170824_1049680902	3300031231	Forest Soil	MFDRVGEVMSLILGALAVGYLVYEVERRRRKLHELWDVLDDDDAVITAALQDMVESGELQPFAGATLA
Ga0318516_100613892	3300031543	Soil	MFDRFTEVVSLVLGALAVAYLVYEIDRRQRKLHDLWDVLDGEDAILTNTLEDMVESGELVPYAGATLA
Ga0318516_102700861	3300031543	Soil	MFDRVTEVISLVLGVLALGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVEKGELRPFAGAALA
Ga0318534_101692054	3300031544	Soil	MFDRFTEVVSLVLGALAVAYVVYEIDRRQRKLHDLWDVLDGEDAILTNTLEDMVESGELVPYAGATLA
Ga0318541_100228392	3300031545	Soil	MFDRVTEVISLVLGVLALGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVENGELRPFAGAALA
Ga0318542_103562832	3300031668	Soil	MFDRVTEVISLVLGALALGYLVYEIDRRQRKLHEIWDVLDGEDAIITDSLEDMVEKGEL
Ga0318561_101132351	3300031679	Soil	SLVLGALALGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVENGELRPFAGAALA
Ga0306917_114691542	3300031719	Soil	TEVISLVLGALALGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVEKGELRPFAGAALA
Ga0318493_105979611	3300031723	Soil	DRVTEVISLVLGVLALGYLVYEIDRRQRKLHEIWDVLDGEDAIITDSLEEMVEKGELRPFAGAALA
Ga0307468_1022281962	3300031740	Hardwood Forest Soil	FSMVLGALAVGYLVFEIDRRQRKLHEIFDVLDADDAELTARLEDMVKSGERQPYTGATLA
Ga0318492_107273201	3300031748	Soil	VLGALAVAYLVYEIDRRQRKLHDLWDVLDGEDAILTNTLEDMVESGELVPYAGATLA
Ga0318521_101373491	3300031770	Soil	TEVISLVLGALALGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVENGELRPFAGAALA
Ga0318566_100647852	3300031779	Soil	MFDRVTEVISLVLGVLALGYLVYEIDRRQRKLHEIWDVLDGEDAIITDSLEDMVEKGELRPFAGAALA
Ga0318548_105683562	3300031793	Soil	MFDRFTEVVSLVLGALAVAYLVYEIDRRQRKLHELWDVLDGEDAILTNTLEDMVESGELVPYAGATLA
Ga0318497_101167014	3300031805	Soil	MFDRVTEVISLVLGVLALGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVENGELRPFAG
Ga0306919_103085313	3300031879	Soil	MFDRVTEVISLVLGALALGYLVYEIDRRQRKLHEIWDVLDGEDAIITDSLEEMVEKGELRPFAGAALA
Ga0306925_102167922	3300031890	Soil	MFDRVTEVISLVLGALALGYLVYEIDRRQRKLHEIWDVLDGEDAIITDSLEDMVEKGELRPFAGAALA
Ga0318551_101348924	3300031896	Soil	MFDRVTEVISLVLGVLALGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVENGELRPFAGAA
Ga0310916_113081982	3300031942	Soil	MLDRAGEVLSLVLGALAIGYLVYEIERRRRKLHDLWDVLDGEDAIITGDLEDMVDNGELRPFAGTALA
Ga0310916_113635462	3300031942	Soil	MFDRVTEVISLVLGALALGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVEKGELRPFAGAALA
Ga0310910_100148615	3300031946	Soil	MFDRVTEVISLVLGALALGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVENGELRPFAGAALA
Ga0310910_112685242	3300031946	Soil	MFDRVTEVISLVLGALALGYLVYEIDRRQRKLHDIWDVLDGEDAIITNSLEDMVEKGELRPFAGAALA
Ga0310910_115791352	3300031946	Soil	MFDRVTEVISLVLGALALGYLVYEIDRRQRKLHEIWDVLDGEDAIITDSLEDMVEKGELRPF
Ga0306926_128331931	3300031954	Soil	MPEQWSDYVTMFLGALAVGYLVYEIDRRRRKLHDVFDVLDEDDVNITKALEDMVANGELQPYAGTSLA
Ga0307479_114486102	3300031962	Hardwood Forest Soil	MFDRVGEVMSLILGALAVGYLVYEIERRRRKLHELWDVLDDDDAVITAALQDMVESGELQPFAGATLA
Ga0318505_101021511	3300032060	Soil	MFDRFTEVVSLVLGALAVAYVVYEIDRRQRKLHDLWDVLDGEDAILTNTLEDMVESGELVPYAGAT
Ga0318514_106349641	3300032066	Soil	MFDRVTEVISLVLGALALGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVEKGEL
Ga0318518_100920264	3300032090	Soil	MFDRVTEVISLVLGVLALGYLVYEIDRRQRKLHEIWDVLDGEDAIITNSLEDMVENGELR
Ga0307470_101145943	3300032174	Hardwood Forest Soil	MFDRVGEIFSMVLGALAVGYLVFEIDRRQRKLHEIFDVLDADDAELTARLEDMVKSGELQPYTGATLA
Ga0307472_1000482642	3300032205	Hardwood Forest Soil	MFDRVGEIFSMVLGALAVGYLVFEIDRRQRKLHEIFDVLDADDAELTATLEDMVKSGELQPYTGATLA
Ga0307472_1020914362	3300032205	Hardwood Forest Soil	MFDRVGEVMSLILGALAVGYLVYEIERRRRKLHELWDVLDDDDAVITAALQDMVESGELQPFAGASLA
Ga0306920_1002229523	3300032261	Soil	DRVTEVISLVLGALALGYLVYEIDRRQRKLHEIWDVLDGEDAIITDSLEEMVEKGELRPFAGAALA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059851

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences