Metagenome Family F060117

Basic Information
Family ID	F060117
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	52 residues
Representative Sequence	STYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ
Number of Associated Samples	103
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.526 % of family members)
Environment Ontology (ENVO)	Unclassified (45.113 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (74.436 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 19.74% Coil/Unstructured: 80.26%
Feature Viewer

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Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF07884	VKOR	28.57
PF13544	Obsolete Pfam Family	23.31
PF07963	N_methyl	21.80
PF13633	Obsolete Pfam Family	10.53
PF13462	Thioredoxin_4	7.52
PF00005	ABC_tran	1.50
PF00535	Glycos_transf_2	0.75
PF08448	PAS_4	0.75
PF12679	ABC2_membrane_2	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG4243	Vitamin K epoxide reductase (VKOR) family protein, predicted involvement in disulfide bond formation	General function prediction only [R]	28.57

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	53.38%
Environmental	Environmental	46.62%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	53.38%
Terrestrial	Environmental → Terrestrial	46.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.30%
Roots	Host-Associated → Plants → Roots	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.29%
Loam	Environmental → Terrestrial → Soil → Loam	15.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.52%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.26%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.75%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.75%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.51%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.01%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.01%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	3.01%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.01%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.01%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.01%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.75%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300027435	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G05K3-12 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_140622122	3300000363	Soil	ATAIPASVGQSGTRSFATNNSGAIYQNFTGMAIAVDMGGAQILQ*
JGI10214J12806_107522301	3300000891	Soil	NNTASQSTYHATATPASVGQTGTRAFATNNSGTIYQNFTGTAIAVTMAATQILQ*
JGI11615J12901_100083911	3300000953	Soil	PAAFNVLGGGSTCNGTTSQSTYHATATPATLGQSGTRAFATNNSGTVYQNYTGVQIPSSLAGTQVLQ*
JGI1027J12803_1072818706	3300000955	Soil	KSGYLISLAPGANSVAVRTSANTCNGTNSFSTYHATATPATVGQSGTRAFATNNSGAIVQNFTGAAIPLTMAGAQILQ*
JGI10220J13317_124810043	3300001139	Soil	ATATPASVGQTGTRAFATNNSGTIYQNFTGTAIAVTMAATQILQ*
C687J26631_102544972	3300002124	Soil	YTFALIAGANVQPVLLAAATCNATASFSTYHATATPVTLGSTGTRSFGTNNSGTIWQNFNGILIPVGMAGATVLN*
soilL2_100405401	3300003319	Sugarcane Root And Bulk Soil	AAGANSVAVRTSANTCNGTNSFSTYHATATPATVGQSGTRAFATNNSGAIFQNFTGAAIAVTMAGTQILQ*
Ga0062593_1003662063	3300004114	Soil	STYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ*
Ga0062592_1003588203	3300004480	Soil	TATPASVGQTGTRAFATNNSGTIYQNFTGTAIAVTMAATQILQ*
Ga0062592_1027158921	3300004480	Soil	SPVLASANTCNGTNSFSTYHATATPATVGQTGTRAFGTNNSGTIYQNFTGTAIDVNMTGAQLLQ*
Ga0065704_105691223	3300005289	Switchgrass Rhizosphere	ATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ*
Ga0065715_100718492	3300005293	Miscanthus Rhizosphere	NIALEAGANSIAVRTSANTCNGTNSFSTYHATATPATVGQSGTRAFATNNSGAIFQNFTGTAIAVTMAGTQILQ*
Ga0065715_104335172	3300005293	Miscanthus Rhizosphere	TPGTVGQSGTRAFATNNSGAIVQNFTGAAIPVTMAGAQILQ*
Ga0065715_111032941	3300005293	Miscanthus Rhizosphere	STYHATATPASVGQTGTRAFATNNSGTIYQNFTGTSIGVTMAGAQILQ*
Ga0065715_111146202	3300005293	Miscanthus Rhizosphere	LAAANTCNNTASQSTYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ*
Ga0065707_100021311	3300005295	Switchgrass Rhizosphere	YHATATPATVGQTGTRAFATNNSGTIYQNFTGMPIDNGMTGAQILQ*
Ga0065707_101754613	3300005295	Switchgrass Rhizosphere	YHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ*
Ga0065707_107603642	3300005295	Switchgrass Rhizosphere	TYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ*
Ga0070690_1001887502	3300005330	Switchgrass Rhizosphere	YHATATPGTVGQSGTRAFATNNSGAIFQNFTGVAIPVTMAGAQILQ*
Ga0066388_1081887012	3300005332	Tropical Forest Soil	IAVLAAANSCNNTASQSTYHATATPASVGQTGTRAFGTNNSGTIYQNFTGTAIGVNMAGAQILQ*
Ga0068869_1003248431	3300005334	Miscanthus Rhizosphere	LIELAAGANSAPVRTTANSCNGTNSFSTYHATATPATVGQSGTRAFATNNTGAIFQNFTGAAIAVSMAGAQILQ*
Ga0070680_1003007881	3300005336	Corn Rhizosphere	ATVGQSGTRAFATNNSGAIFQNYTGAAIAANMAGTQILQ*
Ga0070680_1007346742	3300005336	Corn Rhizosphere	QSTYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ*
Ga0070689_1016226631	3300005340	Switchgrass Rhizosphere	NTASQSTYHATATPASVGQTGTRAFATNNSGTIYQNFTGTAIAVTMAATQILQ*
Ga0070661_1005535632	3300005344	Corn Rhizosphere	SGYNIALEAGVNSITVRTSANTCNGTNSFSTYHATATPATVGQSGTRAFATNNSGAIFQNYTGAAIAANMAGTQILQ*
Ga0070661_1009504581	3300005344	Corn Rhizosphere	ATPVSVSQTGTRAFATNNSGTIYQNFTGTIIANTMASTQILQ*
Ga0070669_1012179052	3300005353	Switchgrass Rhizosphere	ANTCNNTASQSTYHATATPASVGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ*
Ga0070675_1021222961	3300005354	Miscanthus Rhizosphere	NSCNNTASQSTYHATATPASVGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGSQILQ*
Ga0070659_1004185632	3300005366	Corn Rhizosphere	TPATLGQSGTRAFATNNSGAIVQNFTGVAIAVNMAGTQILQ*
Ga0070659_1020352402	3300005366	Corn Rhizosphere	ASQSTYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ*
Ga0070705_1000486481	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	GVVSQSSYHATGTPATLGQSGTRAFATNNSGTVYQNYTGVQIPTNLAGTQVLQ*
Ga0070694_1012438912	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RTSANTCNGTNSFSTYHATATPATVGQSGTRAFATNNSGAIFQNYTGAAIAVTMAGAQILQ*
Ga0070694_1012449951	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	ATLGQTGTRSFATNNSGTIYQNFNGIVIPATMAGAQILQ*
Ga0070685_104532542	3300005466	Switchgrass Rhizosphere	TCNGTNSFSTYHATATPASVGQTGTRAFATNNSGTIYQNFTGTAIAITMAATQILQ*
Ga0070707_1000522595	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	TCNGTASQSTYHATADPATKGQTGTRSFATNNSGTIYQDFSGATIPATMAGAQILQ*
Ga0070679_1018113322	3300005530	Corn Rhizosphere	CNNTASQSTYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ*
Ga0070697_1016644712	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	PATMGQTGTRAFSTNNSGTVYQNYTGVAIPATLAGAQVLQ*
Ga0070672_1005652233	3300005543	Miscanthus Rhizosphere	QSTYHATATPASVGQTGTRAFATNNSGTIYQNFTGTAIAVTMAATQILQ*
Ga0070695_1011854731	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	YHATATPATLGQTGTRSFATNNSGTIYQNFNGIVIPATMAGAQILQ*
Ga0070696_1007333132	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	ASQSTYHATATPASVGQTGTRAFATNNSGTIYQNFTGTAIAVTMAATQILQ*
Ga0070696_1014285201	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	ASQSTYHATATPATPGQTGTRAFGTNNSGTIYQNFTGVVIPATMAGAQILQ*
Ga0070664_1004352263	3300005564	Corn Rhizosphere	TIGLVAGANAVAVLAAANTCNNTASQSTYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ*
Ga0070664_1012752662	3300005564	Corn Rhizosphere	TCNGTNSFSTYHATATPGTVGQTGTRAFATNNSGAIYQNFTGAAIPVTMAGTQILQ*
Ga0068857_1004435273	3300005577	Corn Rhizosphere	FSTYHATATPVSVSQTGTRAFATNNSGTIYQNFTGTIIANTMASTQILQ*
Ga0068864_1005335723	3300005618	Switchgrass Rhizosphere	TCNNTASQSTYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ*
Ga0075417_101619811	3300006049	Populus Rhizosphere	ATATPATLGQTGTRSFATNNSGTIYQNFNGIIIPATMAGAQILQ*
Ga0075427_100317331	3300006194	Populus Rhizosphere	QSGTRAFATNNSGAIVQNFTGAAIPVTMAGAQILQ*
Ga0097621_1023514941	3300006237	Miscanthus Rhizosphere	VLAAANSCNNTASQSTYHATATPASVGQTGTRAFATNNSGTIYQNFAGTAIGVNMAGSQILQ*
Ga0066658_105786721	3300006794	Soil	AEAHPQTKGQTGTRAFGTNNSGTIYQNFTGTAVPQDMSGAQILQ*
Ga0075428_1008520471	3300006844	Populus Rhizosphere	VGQSGTRAFATNNSGAIFQNFTGVAIAANMAGTQILQ*
Ga0075425_1000786051	3300006854	Populus Rhizosphere	SQSTYHATATPATLGQTGTRSFATNNSGTIYQNFNGIVIPATMAGAQILQ*
Ga0075425_1003994843	3300006854	Populus Rhizosphere	NNTASQSTYHATATPASLGQTGTRAFATNNSGTIYQNFAGTAIGVNMAGAQILQ*
Ga0075425_1013894612	3300006854	Populus Rhizosphere	HATATPGTVGQSGTRAFATNNSGAIVQNFTGAAIPVTMAGAQILQ*
Ga0075429_1010063122	3300006880	Populus Rhizosphere	ATATPATVGQSGTRAFATNNSGAIFQNFTGTAIAVTMAGTQILQ*
Ga0068865_1006119152	3300006881	Miscanthus Rhizosphere	AAGANSVAVRTSANTCNGTNSFSTYHATATPGTVGQSGTRAFATNNSGAIVQNFTGAAIPVTMAGAQILQ*
Ga0097620_1010521661	3300006931	Switchgrass Rhizosphere	QTGTRAFATNNSGTIYQNFTGTAIAITMAATQILQ*
Ga0111539_108968741	3300009094	Populus Rhizosphere	AVRTSANTCNGTNSFSTYHATATPATVGQSGTRAFATNNSGAIFQNFTGVAIAANMAGTQILQ*
Ga0111539_122472221	3300009094	Populus Rhizosphere	TYHATATPASVGQTGTRAFATNNSGTIYQNFTGTAIAVTMAATQILQ*
Ga0105245_103424971	3300009098	Miscanthus Rhizosphere	SVGQTGTRAFATNNSGTIYQNFTGTAIAVTMAAAQILQ*
Ga0114129_114829271	3300009147	Populus Rhizosphere	GQTGTRAFATNNSGTIYQNFTGTAIAVTMAATQILQ*
Ga0114129_126295011	3300009147	Populus Rhizosphere	QSTYHATATPATLGQTGTRSFATNNSGTIYQNFNGIIIPATMAGAQILQ*
Ga0075423_129487351	3300009162	Populus Rhizosphere	TYHATATPATVGQSGTRAFATNNSGAIVQNFTGAAIAVNMAGTQILQ*
Ga0105248_114059841	3300009177	Switchgrass Rhizosphere	NTCNGTNSFSTYHATATPATVGQSCTRAFATNNSGAIFQNFTGTAIAVTMAGTQILQ*
Ga0126310_106558671	3300010044	Serpentine Soil	IGPDLNANGVQKSGYLIALEVGANAVAVRTSANTCNGTSSFSTYHATATPATLGQSGTRAFATNNTGAIYQNFTGAAIAVNMGGAQILQ*
Ga0126377_109814061	3300010362	Tropical Forest Soil	NSVAVRTSASTCNGTNSFSTYHATATPATVGQSGTRAFATNNSGAIVQNFTGVAIPVTMAGTQILQ*
Ga0134121_125967702	3300010401	Terrestrial Soil	GQTGTRAFGTNNSGTSYQNFTGVVIPATMAGAQILQ*
Ga0105246_114481932	3300011119	Miscanthus Rhizosphere	ASTCNNTASQSTYHATATPASVGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ*
Ga0137399_107579622	3300012203	Vadose Zone Soil	GQTGTRSFGTNNSGTIYQNFNGIVIPATMAGAQILQ*
Ga0137399_112949762	3300012203	Vadose Zone Soil	VLAAAATCNNTASQSTYHATATPATLGQTGTRSFGTNNSGTIYQNFNGIIIPATMAGAQILQ*
Ga0137399_112997811	3300012203	Vadose Zone Soil	MAAASTCNSTASQSTYHATATPATAGQTGTRAFGTNNSGTIYQNFTGVVIPATMVGAQILQ*
Ga0137397_104199811	3300012685	Vadose Zone Soil	LGQTGTRSFGTNNSGTIYQNFNGIIIPATMAGAQILQ*
Ga0157306_104846792	3300012912	Soil	HATATPASVGQTGTRAFATNNSGTIYQNFTGTAIAVTMAATQILQ*
Ga0137419_104802941	3300012925	Vadose Zone Soil	PATLGQTGTRSFGTNNSGTIYQNFNGIVIPATMAGAQILQ*
Ga0137410_114648962	3300012944	Vadose Zone Soil	LGQTGTRSFGTNNSGTIYQNFNGIVIPATMAGAQILQ*
Ga0164298_103024123	3300012955	Soil	PDLNANGVQKSGYLIALAAGANSVAVRTSANTCNGTNSFSTYHATATPATLGQSGTRAFATNNSGAIVQNFTGVAIAVNMAGTQILQ*
Ga0126369_121342921	3300012971	Tropical Forest Soil	SFSTYHATATPATLGQSGTRAFATNNSGAIVQNFTGAAIAVNMAGTQFLQ*
Ga0164309_112791411	3300012984	Soil	SANTCNGTNSFSTYHATATPATLGQSGTRAFATNNSGAIVQNFTGAAIAVNMAGTQILQ*
Ga0164305_100677233	3300012989	Soil	FSTYHATATPATLGQSGTRAFATNNSGAIVQNFTGVAIAVNMAGTQILQ*
Ga0157378_104407601	3300013297	Miscanthus Rhizosphere	TPASLGQTGTRAFATNNSGTIYQNFAGTAIGVNMAGAQILQ*
Ga0157378_107930271	3300013297	Miscanthus Rhizosphere	AAGANAIAVLAAANTCNNTASQSTYHATATPASLGQTGTRAFATNNSGTIYQNFAGTAIGVNMAGAQILQ*
Ga0163162_118288961	3300013306	Switchgrass Rhizosphere	VAVLAAANTCNNTASQSTYHATATPASVGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ*
Ga0157375_111018311	3300013308	Miscanthus Rhizosphere	ATATPASVGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ*
Ga0157375_127255781	3300013308	Miscanthus Rhizosphere	HATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ*
Ga0157377_100662581	3300014745	Miscanthus Rhizosphere	PASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ*
Ga0157376_108355081	3300014969	Miscanthus Rhizosphere	SATTCNGTNSFSTYHATATPGTVGQTGTRAFATNNSGAIFQNFTGVAIPVTMAGAQILQ*
Ga0132258_123008611	3300015371	Arabidopsis Rhizosphere	QTKGQTGTRAFGTNNSGTIYQNFTGTAVPQDMSGAQILQ*
Ga0132256_1009930791	3300015372	Arabidopsis Rhizosphere	TVKTAADTCNGTESQTQYHATATPTLVGQSGTRAFATNNSGTVFENLTGAAIPTDLSGTHVLQ*
Ga0132256_1016267121	3300015372	Arabidopsis Rhizosphere	NSFSTYHATATPGTVGQTGTRAFATNNSGAIVQNFTGAAIPVTMAGAQILQ*
Ga0132257_1020154512	3300015373	Arabidopsis Rhizosphere	QTGTRAFATNNSGTIYQNFTGTAIAVTMAATQILQ*
Ga0132257_1031664091	3300015373	Arabidopsis Rhizosphere	ATATPVSVSQSGTRAFATNNSGTIYQNFTGTAIANTMASTQILQ*
Ga0132255_1003738333	3300015374	Arabidopsis Rhizosphere	GQTGTRAFATNNSGTIYQNFAGTAIGVNMAGAQILQ*
Ga0132255_1005993113	3300015374	Arabidopsis Rhizosphere	HATATPATPGQTGTRAFATNNSGTIYQNYTGVAIPTSMAGAQILQ*
Ga0163161_111607201	3300017792	Switchgrass Rhizosphere	TGAIAVLAAAATCNNTASQSTYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ
Ga0190274_120357121	3300018476	Soil	ATATPATLGQSGTRAFATNNTGAIYQNFTGAAIAVTMAGAQILQ
Ga0207697_104851391	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	PASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ
Ga0207682_104587721	3300025893	Miscanthus Rhizosphere	ASVGQTGTRAFATNNSGTIYQNFTGTAIAVTMAATQILQ
Ga0207688_101833801	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	NTCNNTASQSTYHATATPASVGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ
Ga0207643_105626271	3300025908	Miscanthus Rhizosphere	ANTCNGTNSFSTYHATATPGTVGQSGTRAFATNNSGAIVQNFTGAAIPVTMAGAQILQ
Ga0207660_102319701	3300025917	Corn Rhizosphere	ATVGQSGTRAFATNNSGAIFQNYTGAAIAANMAGTQILQ
Ga0207662_104196631	3300025918	Switchgrass Rhizosphere	NTCNNTASQSTYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ
Ga0207649_108219021	3300025920	Corn Rhizosphere	NGTNSFSTYHATATPATVGQSGTRAFATNNSGAIFQNFTGTAIAVTMAGTQILQ
Ga0207649_108454901	3300025920	Corn Rhizosphere	ATPVSVSQTGTRAFATNNSGTIYQNFTGTIIANTMASTQILQ
Ga0207649_116165671	3300025920	Corn Rhizosphere	ANSVAVRTSANTCNGTNSFSTYHATATPGTVGQSGTRAFATNNSGAIVQNFTGAAIPVTMAGAQILQ
Ga0207646_109650662	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TASQSTYHATATPATLGQTGTRSFATNNSGTIYQNFNGIVIPATMAGAQILQ
Ga0207670_101781561	3300025936	Switchgrass Rhizosphere	QSTYHATATPASVGQTGTRAFATNNSGTIYQNFTGTAIAVTMAATQILQ
Ga0207704_104756411	3300025938	Miscanthus Rhizosphere	YHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ
Ga0207704_118038881	3300025938	Miscanthus Rhizosphere	KSGYLISLAAGANSVAVRTSANTCNGTNSFSTYHATATPGTVGQSGTRAFATNNSGAIVQNFTGAAIPVTMAGAQILQ
Ga0207691_101046644	3300025940	Miscanthus Rhizosphere	VGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGSQILQ
Ga0207679_106769571	3300025945	Corn Rhizosphere	CNNTASQSTYHATATPASVGQTGTRAFATNNSGTIYQNFTGTAIAVTMAATQILQ
Ga0207651_105399802	3300025960	Switchgrass Rhizosphere	TCNGTNSFSTYHATATPATVGQSGTRAFATNNSGAIVQNFTGAAIPVTMAGAQILQ
Ga0207651_106518122	3300025960	Switchgrass Rhizosphere	VLAAANTCNNTASQSTYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ
Ga0207658_109370002	3300025986	Switchgrass Rhizosphere	VAGANAVAVLAAANTCNNTASQSTYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ
Ga0207677_101414261	3300026023	Miscanthus Rhizosphere	ASQSTYHATATPASVGQTGTRAFATNNSGTIYQNFTGTAIAVTMAATQILQ
Ga0207677_103049204	3300026023	Miscanthus Rhizosphere	TASQSTYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGSQILQ
Ga0207676_125619312	3300026095	Switchgrass Rhizosphere	VAVLAAANTCNNTASQSTYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ
Ga0207674_108376152	3300026116	Corn Rhizosphere	TTANTCNGTNSFSTYHATATPATVGQSGTRAFATNNSGAIFQNFTGAAIAVTMAGAQILQ
Ga0209438_10443191	3300026285	Grasslands Soil	TCNGTLSQSTYHATGTPATLGQTGTRAFATNNSGTVYQNFTGVQIPSSLAGTQVLQ
Ga0207553_10092381	3300027435	Soil	VGQSGTRAFATNNSGAIFQNFTGTAIAVTMAGTQILQ
Ga0209481_103474611	3300027880	Populus Rhizosphere	NTASQSTYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ
Ga0207428_103565312	3300027907	Populus Rhizosphere	VRTSANTCNGTNSFSTYHATATPATVGQSGTRAFATNNSGAIFQNFTGVAIAANMAGTQILQ
Ga0268264_111352512	3300028381	Switchgrass Rhizosphere	NNTASQSTYHATATPASVGQTGTRAFATNNSGTIYQNFTGTAIAVTMAATQILQ
Ga0307504_101089281	3300028792	Soil	STYHATATPATAGQTGTRAFGTNNSGTIYQNFTGVVIPATMVGAQILQ
Ga0310888_103610221	3300031538	Soil	AANTCNNTASQSTYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ
Ga0310813_101683681	3300031716	Soil	TSATTCNGTNSFSTYHATATPGTVGQTGTRAFATNNSGAIFQNFTGVAIPVTMAGAQILQ
Ga0307469_119492751	3300031720	Hardwood Forest Soil	AVLAAAATCNNTASQSTYHATATPATAGQTGTRAFATNNSGTIYQNFTGVLIPATMAGAAILQ
Ga0307473_103250471	3300031820	Hardwood Forest Soil	NNTASQSTYHATATPATAGQTGTRAFATNNSGTIYQNFTGVLIPATMAGAAILQ
Ga0307473_111591502	3300031820	Hardwood Forest Soil	SVSQTGTRAFATNNSGTIYQNFTGTAIANTMASTQILQ
Ga0310907_101072473	3300031847	Soil	QSTYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ
Ga0310903_100638073	3300032000	Soil	SLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ
Ga0310902_101201803	3300032012	Soil	GANAVAVLAAANTCNNTASQSTYHATATPASLGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ
Ga0310906_104934131	3300032013	Soil	YHATATPATPGQTGTRAFATNNSGTIYQNYTGVAIPTSMAGAQILQ
Ga0310895_104993251	3300032122	Soil	LGQTGTRAFATNNSGTIYQNFTGTAIGVNMAGTQILQ
Ga0310895_105949171	3300032122	Soil	ATPATVGQSGTRAFATNNSGAIFQNFTGTAIAVTMAGTQILQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060117

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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