Metagenome Family F060148

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F060148
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	58 residues
Representative Sequence	VEFGKRFSVHNNRPAPAVQETCVRCCGTGRVRERGNRIICKPCAGTGRITVVKERAS
Number of Associated Samples	91
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.20 %
% of genes near scaffold ends (potentially truncated)	21.05 %
% of genes from short scaffolds (< 2000 bps)	80.45 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (65.414 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog (13.534 % of family members)
Environment Ontology (ENVO)	Unclassified (30.075 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.383 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 16.47% Coil/Unstructured: 83.53%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF04909	Amidohydro_2	12.78
PF00378	ECH_1	6.02
PF00856	SET	5.26
PF03401	TctC	4.51
PF00903	Glyoxalase	3.01
PF13458	Peripla_BP_6	2.26
PF01613	Flavin_Reduct	2.26
PF04028	DUF374	2.26
PF04365	BrnT_toxin	1.50
PF15919	HicB_lk_antitox	1.50
PF13683	rve_3	1.50
PF00460	Flg_bb_rod	1.50
PF07927	HicA_toxin	1.50
PF07100	ASRT	0.75
PF08028	Acyl-CoA_dh_2	0.75
PF01052	FliMN_C	0.75
PF05683	Fumerase_C	0.75
PF01042	Ribonuc_L-PSP	0.75
PF00899	ThiF	0.75
PF13586	DDE_Tnp_1_2	0.75
PF16277	DUF4926	0.75
PF14384	BrnA_antitoxin	0.75
PF06429	Flg_bbr_C	0.75
PF13744	HTH_37	0.75
PF00654	Voltage_CLC	0.75
PF02810	SEC-C	0.75
PF07883	Cupin_2	0.75
PF02120	Flg_hook	0.75
PF01464	SLT	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	4.51
COG1256	Flagellar hook-associated protein FlgK	Cell motility [N]	2.26
COG1558	Flagellar basal body rod protein FlgC	Cell motility [N]	2.26
COG1749	Flagellar hook protein FlgE	Cell motility [N]	2.26
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	2.26
COG2121	Uncharacterized conserved protein, lysophospholipid acyltransferase (LPLAT) superfamily	Function unknown [S]	2.26
COG4786	Flagellar basal body rod protein FlgG	Cell motility [N]	2.26
COG4787	Flagellar basal body rod protein FlgF	Cell motility [N]	2.26
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	1.50
COG1815	Flagellar basal body rod protein FlgB	Cell motility [N]	1.50
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	1.50
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.75
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.75
COG1838	Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain	Energy production and conversion [C]	0.75
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.75
COG3144	Flagellar hook-length control protein FliK	Cell motility [N]	0.75
COG4288	Uncharacterized conserved protein	Function unknown [S]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.41 %
Unclassified	root	N/A	34.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.41 %
Unclassified	root	N/A	34.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.41 %
Unclassified	root	N/A	34.59 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.11 %
Unclassified	root	N/A	34.59 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.02 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.50 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	42.11 %
Unclassified	root	N/A	34.59 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6.02 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.50 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	30.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.02 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.01 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.50 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.75 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.59 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	6.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.02 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	4.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	1.50 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.50 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.50 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.75 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.75 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.59 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	6.77 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	4.51 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.01 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1.50 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	1.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.50 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.75 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.75 %
Candidatus Ryanbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Ryanbacteria	0.75 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.75 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.59 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	4.51 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	4.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1.50 %
Bradyrhizobium guangdongense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	1.50 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	1.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.50 %
unclassified Rhodopseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas	0.75 %
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Ryanbacteria → Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22	0.75 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.75 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.75 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.59 %
Pseudonocardia kujensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kujensis	4.51 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Singulisphaera acidiphila	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila	1.50 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1.50 %
Bradyrhizobium guangdongense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	1.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.50 %
Rhodopseudomonas sp. B29	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp. B29	0.75 %
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Ryanbacteria → Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22	0.75 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.75 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.75 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.59 %
Pseudonocardia kujensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kujensis	4.51 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.01 %
Singulisphaera acidiphila DSM 18658	strain	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila → Singulisphaera acidiphila DSM 18658	1.50 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1.50 %
Bradyrhizobium guangdongense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	1.50 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.50 %
Rhodopseudomonas sp. B29	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp. B29	0.75 %
Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Ryanbacteria → Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22	0.75 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.75 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.75 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.75 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10185972	Not Available	727	Open in IMG/M
3300002245\|JGIcombinedJ26739_101443314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	582	Open in IMG/M
3300004080\|Ga0062385_10254185	All Organisms → cellular organisms → Bacteria → Proteobacteria	982	Open in IMG/M
3300004080\|Ga0062385_10322138	Not Available	895	Open in IMG/M
3300004080\|Ga0062385_10388649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	830	Open in IMG/M
3300004080\|Ga0062385_10445739	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300004080\|Ga0062385_11249209	Not Available	510	Open in IMG/M
3300004082\|Ga0062384_100887063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	630	Open in IMG/M
3300004092\|Ga0062389_101487490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	861	Open in IMG/M
3300004092\|Ga0062389_102922838	Not Available	639	Open in IMG/M
3300005336\|Ga0070680_100221206	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300005451\|Ga0066681_10264362	Not Available	1047	Open in IMG/M
3300005529\|Ga0070741_10106741	All Organisms → cellular organisms → Bacteria	2948	Open in IMG/M
3300005534\|Ga0070735_10239467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1102	Open in IMG/M
3300005538\|Ga0070731_10128166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1682	Open in IMG/M
3300005541\|Ga0070733_10422135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	888	Open in IMG/M
3300005574\|Ga0066694_10268089	Not Available	810	Open in IMG/M
3300005591\|Ga0070761_11036488	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005712\|Ga0070764_10649363	Not Available	647	Open in IMG/M
3300006032\|Ga0066696_10273328	Not Available	1095	Open in IMG/M
3300006059\|Ga0075017_100649933	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300006102\|Ga0075015_100800632	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300006176\|Ga0070765_101111980	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300006176\|Ga0070765_102065851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	532	Open in IMG/M
3300007982\|Ga0102924_1000055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	125359	Open in IMG/M
3300007982\|Ga0102924_1022566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4496	Open in IMG/M
3300009521\|Ga0116222_1383420	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300009523\|Ga0116221_1073487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1541	Open in IMG/M
3300009547\|Ga0116136_1042053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	1325	Open in IMG/M
3300009632\|Ga0116102_1086975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	915	Open in IMG/M
3300009700\|Ga0116217_10374727	Not Available	906	Open in IMG/M
3300009759\|Ga0116101_1187725	Not Available	522	Open in IMG/M
3300009839\|Ga0116223_10843752	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300010379\|Ga0136449_102794401	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila → Singulisphaera acidiphila DSM 18658	689	Open in IMG/M
3300010396\|Ga0134126_11162208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	859	Open in IMG/M
3300011120\|Ga0150983_10146999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	543	Open in IMG/M
3300012088\|Ga0153944_1089567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	592	Open in IMG/M
3300014151\|Ga0181539_1059079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangdongense	1757	Open in IMG/M
3300014164\|Ga0181532_10282675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kujensis	944	Open in IMG/M
3300014164\|Ga0181532_10439089	Not Available	721	Open in IMG/M
3300014165\|Ga0181523_10002828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16354	Open in IMG/M
3300014168\|Ga0181534_10307416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300014168\|Ga0181534_10857456	Not Available	540	Open in IMG/M
3300014169\|Ga0181531_10043670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2608	Open in IMG/M
3300014169\|Ga0181531_10061043	All Organisms → cellular organisms → Bacteria → Proteobacteria	2213	Open in IMG/M
3300014169\|Ga0181531_10231638	Not Available	1125	Open in IMG/M
3300014169\|Ga0181531_10942350	Not Available	541	Open in IMG/M
3300014199\|Ga0181535_10072273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2288	Open in IMG/M
3300014199\|Ga0181535_10389979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300014200\|Ga0181526_10547743	Not Available	732	Open in IMG/M
3300014201\|Ga0181537_11079748	Not Available	543	Open in IMG/M
3300014489\|Ga0182018_10001294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28870	Open in IMG/M
3300014489\|Ga0182018_10339553	Not Available	811	Open in IMG/M
3300014492\|Ga0182013_10016372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	7051	Open in IMG/M
3300014499\|Ga0182012_10018508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	6317	Open in IMG/M
3300014501\|Ga0182024_10000692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	87780	Open in IMG/M
3300014501\|Ga0182024_10068163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	5415	Open in IMG/M
3300014501\|Ga0182024_10276428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2234	Open in IMG/M
3300014501\|Ga0182024_10352229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1924	Open in IMG/M
3300014501\|Ga0182024_12521101	Not Available	554	Open in IMG/M
3300014501\|Ga0182024_12534385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300014654\|Ga0181525_10187267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1131	Open in IMG/M
3300014657\|Ga0181522_10097968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1691	Open in IMG/M
3300014657\|Ga0181522_10651539	Not Available	641	Open in IMG/M
3300015206\|Ga0167644_1039903	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300017925\|Ga0187856_1001175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21439	Open in IMG/M
3300017946\|Ga0187879_10125057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1464	Open in IMG/M
3300017988\|Ga0181520_10287612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1237	Open in IMG/M
3300018001\|Ga0187815_10407039	Not Available	579	Open in IMG/M
3300018033\|Ga0187867_10654777	Not Available	573	Open in IMG/M
3300018035\|Ga0187875_10522639	Not Available	629	Open in IMG/M
3300018038\|Ga0187855_10801381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kujensis	549	Open in IMG/M
3300019786\|Ga0182025_1242264	Not Available	1566	Open in IMG/M
3300020582\|Ga0210395_10043961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3269	Open in IMG/M
3300021402\|Ga0210385_10320058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1153	Open in IMG/M
3300021420\|Ga0210394_10008125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10888	Open in IMG/M
3300022557\|Ga0212123_10000238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	188020	Open in IMG/M
3300022557\|Ga0212123_10002347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	46112	Open in IMG/M
3300025633\|Ga0208480_1001720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7867	Open in IMG/M
3300027652\|Ga0209007_1051133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1050	Open in IMG/M
3300027737\|Ga0209038_10227088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	562	Open in IMG/M
3300027745\|Ga0209908_10015909	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300027842\|Ga0209580_10671230	Not Available	512	Open in IMG/M
3300027854\|Ga0209517_10126547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1672	Open in IMG/M
3300027854\|Ga0209517_10231543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1118	Open in IMG/M
3300027889\|Ga0209380_10740219	Not Available	561	Open in IMG/M
3300027895\|Ga0209624_10108710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1815	Open in IMG/M
3300027895\|Ga0209624_10371280	Not Available	954	Open in IMG/M
3300027905\|Ga0209415_10824208	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300027915\|Ga0209069_10947587	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → Singulisphaera acidiphila → Singulisphaera acidiphila DSM 18658	524	Open in IMG/M
3300027986\|Ga0209168_10370132	Not Available	699	Open in IMG/M
3300028906\|Ga0308309_10602971	Not Available	953	Open in IMG/M
3300028906\|Ga0308309_10716924	All Organisms → cellular organisms → Bacteria → Proteobacteria	869	Open in IMG/M
3300028906\|Ga0308309_11666132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kujensis	542	Open in IMG/M
3300029943\|Ga0311340_10853811	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300029943\|Ga0311340_11534243	Not Available	520	Open in IMG/M
3300029944\|Ga0311352_11180234	Not Available	582	Open in IMG/M
3300030580\|Ga0311355_11543900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kujensis	572	Open in IMG/M
3300030617\|Ga0311356_12038846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	506	Open in IMG/M
3300030706\|Ga0310039_10083298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1358	Open in IMG/M
3300031231\|Ga0170824_120329542	Not Available	883	Open in IMG/M
3300031234\|Ga0302325_12432947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kujensis	628	Open in IMG/M
3300031524\|Ga0302320_10552344	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300031525\|Ga0302326_10651146	Not Available	1553	Open in IMG/M
3300031525\|Ga0302326_13716086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia kujensis	502	Open in IMG/M
3300031708\|Ga0310686_104773112	Not Available	864	Open in IMG/M
3300031708\|Ga0310686_107525195	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Ryanbacteria → Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22	926	Open in IMG/M
3300031708\|Ga0310686_109326628	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300031708\|Ga0310686_110247323	Not Available	728	Open in IMG/M
3300031708\|Ga0310686_113278546	Not Available	1246	Open in IMG/M
3300031708\|Ga0310686_115567316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → unclassified Rhodopseudomonas → Rhodopseudomonas sp. B29	1434	Open in IMG/M
3300031708\|Ga0310686_115853461	Not Available	595	Open in IMG/M
3300031708\|Ga0310686_119711431	Not Available	576	Open in IMG/M
3300031715\|Ga0307476_10361342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1070	Open in IMG/M
3300031718\|Ga0307474_11267075	Not Available	582	Open in IMG/M
3300031823\|Ga0307478_10773298	Not Available	804	Open in IMG/M
3300032160\|Ga0311301_10012256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26737	Open in IMG/M
3300032160\|Ga0311301_10138992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4461	Open in IMG/M
3300032770\|Ga0335085_10331398	Not Available	1791	Open in IMG/M
3300032805\|Ga0335078_10026653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8573	Open in IMG/M
3300032805\|Ga0335078_10066143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5300	Open in IMG/M
3300032805\|Ga0335078_10563958	Not Available	1446	Open in IMG/M
3300032805\|Ga0335078_11230937	Not Available	861	Open in IMG/M
3300032805\|Ga0335078_11263947	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300032805\|Ga0335078_11692261	Not Available	694	Open in IMG/M
3300032805\|Ga0335078_12505165	Not Available	532	Open in IMG/M
3300032892\|Ga0335081_10229120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2534	Open in IMG/M
3300032892\|Ga0335081_10315082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2062	Open in IMG/M
3300032895\|Ga0335074_10738200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	937	Open in IMG/M
3300033402\|Ga0326728_10007238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28839	Open in IMG/M
3300033983\|Ga0371488_0270485	Not Available	824	Open in IMG/M
3300034124\|Ga0370483_0109526	Not Available	913	Open in IMG/M
3300034163\|Ga0370515_0095361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1285	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.25%
Host-Associated	Host-Associated	0.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.92%
Aquatic	Environmental → Aquatic	32.33%
Fungi	Host-Associated → Fungi	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.65%
Freshwater	Environmental → Aquatic → Freshwater	27.07%
Peat	Environmental → Terrestrial → Peat	8.27%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.01%
Sediment	Environmental → Aquatic → Sediment	2.26%
Mycelium	Host-Associated → Fungi → Mycelium	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	27.07%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.80%
Loam	Environmental → Terrestrial → Soil → Loam	10.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.27%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.26%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	24.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.05%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	9.02%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.26%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.01%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.26%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.75%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	13.53%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.02%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.27%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.02%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.02%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.02%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	5.26%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.51%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.76%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.01%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.26%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.26%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.50%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.50%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.50%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.75%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.75%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.75%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.75%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012088	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ028 MetaG	Host-Associated	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101859721	3300000567	Peatlands Soil	MDFGKRFSRHNNRPAPVILQTCERCSGTGRVRERGHPITCKVCGGTGKVRAKMDRAS*
JGIcombinedJ26739_1014433141	3300002245	Forest Soil	MDFGKRFSVHNNRPPPIVQQTCVRCCGTGRVRERGERIVCKACAGTGRIDIKTDRAS*
Ga0062385_102541852	3300004080	Bog Forest Soil	MHNNRPAPVVQETCVRCYGTGRVRERGNRIICKTCGGTGRVNVEKDRAS*
Ga0062385_103221382	3300004080	Bog Forest Soil	MHNNRTAPVIQETCVRCCGTGRIRERGNRIICKACAGTGRLTVVKDRAS*
Ga0062385_103886492	3300004080	Bog Forest Soil	MTFGKRFTQHNNRVPTVIQETCVRCYGTGRIRERGDRIICKACAGAG
Ga0062385_104457392	3300004080	Bog Forest Soil	MDFGKRFSIHNGRPAPVIQQTCERCSGTGHVRERGNRIVCKACAGSGKVAVKMDRAS*
Ga0062385_112492091	3300004080	Bog Forest Soil	VEFGKRFSTHNNRPAPVVQETCVRCYGTGRIRERGERLICKACAGTGRVAAIKDRAS*
Ga0062384_1008870632	3300004082	Bog Forest Soil	VDFGKRRFSMHNDRVAPPAQQTCERCFGVGRIRERGNRILCKACAGTGRITVKTET
Ga0062389_1014874902	3300004092	Bog Forest Soil	MTFGKRFSQHNDRVPTVIQETCVRCCGTGRIRERGDRIICKACTGAGRVAVKAERRA*
Ga0062389_1029228382	3300004092	Bog Forest Soil	MTFGKRFTQHNNRVPTVIQETCVRCYGTGRIRERGDRIICKACAGAGRVAVKAERSA*
Ga0070680_1002212061	3300005336	Corn Rhizosphere	MAFGKRFSVHNDRPPTVIQRTCVRCYGTGHIRERGTRLVCKVCTGTGKVTANDAA*
Ga0066681_102643623	3300005451	Soil	MTFGKRFSIHNNRPARVTQQACPRCCGTGRIRERGHSVTCKACAGTGRTKVTADRRA*
Ga0070741_101067415	3300005529	Surface Soil	MAFGKRFSMHNNRPQPVIERTCVRCYGTGHVRERGNRITCKPCAGTGRTPATDERLGPMSAA*
Ga0070735_102394671	3300005534	Surface Soil	MDFGKRFSVHNRRPAPLVQQTCVRCCGTGRVRERGNRIICKACNGTGRTTALIGDRAS*
Ga0070731_101281663	3300005538	Surface Soil	MKFGKRFSIHNKPVAPQQICKRCQGTCRVRERGNSIICRVCVGTGKVEAAAKRAS*
Ga0070733_104221352	3300005541	Surface Soil	MDFGKRFSVHNDRAPPVVQQTCVRCCGTGRVRERGERIVCKACAGTGRINIKTDRAS*
Ga0066694_102680893	3300005574	Soil	IFAMTFGKRFSIHNNRPARVTQQACLRCCGTGRIRERGHPVACKACAGSGRTKVTADRRV
Ga0070761_110364882	3300005591	Soil	VEFGKRFSAHNTRPAPVAQETCVRCCGTGRVRERGNRILCKACAGTGRVTLVKERAS*
Ga0070764_106493632	3300005712	Soil	MEFGKRFSAHNNRPALAVQETCERCCGTGRVRERGNRIICKPCAGTGRVTVVAERAS*
Ga0066696_102733282	3300006032	Soil	MTFGKRFSIHNNRPARVTQQACLRCCGTGRIRERGHPVACKACAGSGRTKVTADRRV*
Ga0075017_1006499332	3300006059	Watersheds	MDFGKRFSMHNERPAAIVQETCLRCYGTGRVRERGNRLICKACAGTGRIMGKVERSA*
Ga0075015_1008006321	3300006102	Watersheds	MDFGKRFSMHNERPAAIVQETCLRCYGTGRVRERGNRLICKACAGTGRIMGKEERSA*
Ga0070765_1011119802	3300006176	Soil	MDFGKRFSMHNERPAAIVQETCLRCYGTGRVRERGNRLICKACAGTGRITGKEERSA*
Ga0070765_1020658512	3300006176	Soil	MVFGKRFSMHNDRAPHVIQETCVRCCGTGRIRERGDRIICKACAGTGRITVKADGDS*
Ga0102924_100005563	3300007982	Iron-Sulfur Acid Spring	VDFGKRFSQHNNRPAPVIQETCVRCCGTGRIRERGDRIICKACAGTGRTAVAADRASSG*
Ga0102924_10225664	3300007982	Iron-Sulfur Acid Spring	MAIQMVFGKRFSIHNNRVAPMVQQTCVRCCGTGHVRERGNRLICKICTGTGRTVVVAERA
Ga0116222_13834202	3300009521	Peatlands Soil	MDFGKRFSKHNNRPAPVILQTCERCSGTGRVRERGHPITCKVCGGTGKVRAKMDRAS*
Ga0116221_10734873	3300009523	Peatlands Soil	VEFGKRFSVHNNRPAPAVQQTCERCCGTGRVRERGNRIICKACAGTGRTTVVAARSA*
Ga0116136_10420533	3300009547	Peatland	MDFGKRFSVHNDRPAPVIQQTCVRCCGTGRVRERGNRIICKACAGSGRITATTDRDS*
Ga0116102_10869751	3300009632	Peatland	MDFGKRFSVHNDRPAPVIQQTCVRCCGTGRVRERGNRIICKACAGSGRITVTPDRKTA*
Ga0116217_103747272	3300009700	Peatlands Soil	KRFSKHNNRPAPVILQTCERCGGTGRVRERGHQITCKVCAGTGRVSAKMDRAS*
Ga0116101_11877251	3300009759	Peatland	MQVEFGKRRFSKHNDRVAPPAQETCVRCFGVGRIRERGNRILCKTCAGTGRITVKTEAAESTTSAA*
Ga0116223_108437521	3300009839	Peatlands Soil	MDFGKRFSKHNNRPAPVILQTCERCGGTGRVRERGHQITCKVCAGTGRVSAKMDRAS*
Ga0136449_1027944013	3300010379	Peatlands Soil	VRKTRNIRVDFGKRFSMHNDRPAAIVQETCVRCYGTGRVRERGNRLICKACAGTGRITGKEERSA*
Ga0134126_111622081	3300010396	Terrestrial Soil	FGKRFSAHNDRPLTVIQRTCVRCYGTGHIRERGTRLICKVCTGTGKVAATDAA*
Ga0150983_101469991	3300011120	Forest Soil	KTRNIRMDFGKRFSMHNDRPAAIVQETCVRCYGTGRVRERGNRLICKACAGTGRVTVKEERSA*
Ga0153944_10895672	3300012088	Attine Ant Fungus Gardens	MEFGKRRFSDHNNRIAPVIQATCVRCCGTGRIRERGNRILCKACAGTGRTNVPAARAS*
Ga0181539_10590792	3300014151	Bog	MDFGKRFSQYNHRPPPLIQQTCVRCCGTGRIRERGDRIVCKACAGTGRTTVKAERSA*
Ga0181532_102826753	3300014164	Bog	MDFGKRFSKHNNRTAPVILQTCERCSGTGRVRERGNRIICKACAGTGRTSVETERASSASPA*
Ga0181532_104390891	3300014164	Bog	VDFGKRFSKHNNRPAPVRQETCVQCFGTGRIRERGNRIVCKACAGTGRITVITDRAS*
Ga0181523_1000282819	3300014165	Bog	VDFGKRFSKHNNRPAPVRQETCVQCFGTGRIRERGDKIICKACAGTGRTSVETERASSASPA*
Ga0181534_103074161	3300014168	Bog	VEFGKRLSVHNSGPAPIAQETCVRCCGTGRIRERGDRIICKACAGTGRVNMVKERAS*
Ga0181534_108574562	3300014168	Bog	VEFGKRFSAHNNRPAPVVQQTCERCSGTGHIRERGSRIACKACAGKGRITVIKDRAS*
Ga0181531_100436703	3300014169	Bog	MAFGKRLPNSGKESAPVVQQTCVRCYGTGRVRERGDRIICKACAGTGRITVKAKRAS*
Ga0181531_100610431	3300014169	Bog	MHNDRVAPPVQETCVQCFGVGRIRERGNRILCKACAGTGRITVKLETAAAEAGSA*
Ga0181531_102316382	3300014169	Bog	LSVHNSGPAPIAQETCVRCCGTGRIRERGDRIICKACAGTGRVNMVKERAS*
Ga0181531_109423501	3300014169	Bog	NTGTQMDFGKRFSVHNDRPAPIIQATCVRCCGTGRVRERGDRLICKNCAGTGRIDVVLDRAS*
Ga0181535_100722733	3300014199	Bog	VEFGKRFSFYDNRPAPAVQETCVRCCGTGRIRERGERLICKACAETGRITVLKDRAS*
Ga0181535_103899792	3300014199	Bog	MTFGKRFSIHNDRVAPVVQQTCVRCYGTGRVRERGNRIICKACAGAGRVDAVTEQRAS*
Ga0181526_105477432	3300014200	Bog	MEFGKRFSQYNSRPPPVIQQTCVRCCGTGRIRERGDRIICKACAGSGRTTVKAERSA*
Ga0181537_110797481	3300014201	Bog	MHNDRVAPPVQETCVQCFGVGRIRERGNRILCKACAGTGRITVKTETAAAAASGAAGTA*
Ga0182018_1000129420	3300014489	Palsa	VQNKGFKVEFGKRFSVHNNRPAPVVQETCVRCCGTGRIRERGNRILCKACAGTGRITVITNRAS*
Ga0182018_103395532	3300014489	Palsa	VDFGKRFSVHNNRPAPVVQETCVRCCGTGRIRERGNRIICKTCAGSGRINVVKDRAS*
Ga0182013_100163729	3300014492	Bog	MEFGKRFSRHNGRRPPVIQQTCARCSGTGHIRERGRRIVCKACAGTGRTTVKAERRA*
Ga0182012_100185081	3300014499	Bog	MEFGKRFSRHNGRRPPVIQQTCPRCSGTGHIRERGRRIVCKACAGTGRTTVKAERRA*
Ga0182024_1000069211	3300014501	Permafrost	MVFGKRFSVQNDRAPAVVQQTCVRCYGTGRIRERGNRLICKACAGTGRINVTTEQHPS*
Ga0182024_100681633	3300014501	Permafrost	MDFGKRFSMHNNRPAPVVKETCVRCCGTGRVRVRGDRIICKPCAGTGRITVKAEQAS*
Ga0182024_102764284	3300014501	Permafrost	MDFGKRFSIHNKRPAAVVQETCVRCRGAGRIRERGERIICKACKGTGRATAKAQRSA*
Ga0182024_103522292	3300014501	Permafrost	MHNDRVAPVIQETCVRCCGTGRVRERGNRIICKTCAGSGRINTVTKRAS*
Ga0182024_125211011	3300014501	Permafrost	MTFGKRFSINNDRVAPVIRQTCERCNGTARILERGNRIICKACAGTGKVVGVAKRAS*
Ga0182024_125343851	3300014501	Permafrost	MDFGKRFSIHNNRTAPVIQHTCVRCCGTGRIRERGNRIICIACAGAGRTTVITERAS*
Ga0181525_101872671	3300014654	Bog	VEFGKRRFSKHNDRVVPPVQETCVRCFGVGRIRERGNRILCKACAGTGRITVKTETAAAAASGAAGIA*
Ga0181522_100979682	3300014657	Bog	MTFGKRFSIHNDRVAPVVQQTCVRCYGTGRVRERGNRIICRVCGGAGKVDAATERRAS*
Ga0181522_106515391	3300014657	Bog	APPAQETCVQCFGVGRVRVRGDRILCKVCAGKGRVTVKAEAAAPTENAAASASSA*
Ga0167644_10399033	3300015206	Glacier Forefield Soil	MTFGKRFTQHNNRVPTVIQETCVRCCGTGRIRERGDRILCKACAGAGRVAVKAERSA*
Ga0187856_100117524	3300017925	Peatland	MDFGKRFSVHNDRPAPVIQQTCVRCCGTGRVRERGNRIICKACAGSGRITATTDRDS
Ga0187879_101250573	3300017946	Peatland	MDFGKRFSVHNDRPAPVIQQTCVRCCGTGRVRERGNRIICKACAGSGRITVTPDRKTA
Ga0181520_102876123	3300017988	Bog	VEFGKRFSFYDNRPAPAVQETCVRCCGTGRIRERGERLICKACAETGRITVLKDRAS
Ga0187815_104070392	3300018001	Freshwater Sediment	VEFGKRFSQHNNRPAPVIQETCVRCCGTGRVRERGERIICKVCAGTGRTTVAAERAPRASSA
Ga0187867_106547772	3300018033	Peatland	MDFGKRFSMHNDRQPTVMQQTCVRCCGTGRVRERGNRIVCKTCAGTGRITIVTERAS
Ga0187875_105226391	3300018035	Peatland	MEFGKRFSRHNGRPAPVILQTCTRCSGTGHVRERGGRIVCKACAGSGRTTVQAERRA
Ga0187855_108013812	3300018038	Peatland	NHVEFGKRFSAHNHRPAPVVQHTCERCCGTGRIRERGNRIICKTCAGSGRINVVKDRAS
Ga0182025_12422642	3300019786	Permafrost	MHNDRVAPVVQETCVRCCGTGRVRERGNRIICKTCAGSGRVNIVTKRAS
Ga0210395_100439612	3300020582	Soil	MVFGKRFSMHNDRAPHIVQETCVRCCGTGRIRERGDRIICKACAGTGRITVKAEGDS
Ga0210385_103200582	3300021402	Soil	MDFGKRFSVHNDRAPPVVQQTCVRCCGTGRVRERGERIVCKACAGTGRINIKTDRAS
Ga0210394_100081259	3300021420	Soil	VDFGKRFSMHNNRPAPVVQETCVRCCGTGRIRERGDRIVCKACAGTGRIAVVTERASNA
Ga0212123_10000238131	3300022557	Iron-Sulfur Acid Spring	VDFGKRFSQHNNRPAPVIQETCVRCCGTGRIRERGDRIICKACAGTGRTAVAADRASSG
Ga0212123_100023476	3300022557	Iron-Sulfur Acid Spring	MDFGKRFSIHNNRPAVAVQETCVRCCGTGRVRVRGERIICKACAGTGRIAVKEERAS
Ga0208480_100172011	3300025633	Arctic Peat Soil	MTFGKRFSIHNDRTLAAVQQTCVRCCGTGRIRERGNRIICKACAGTGRIAGTPGATPDRHTRA
Ga0209007_10511331	3300027652	Forest Soil	VDFGKRRFSKHNDRVAPPAQETCVRCFGVGRIRERGNRILCKACAGTGRITVKTENATAAASSA
Ga0209038_102270881	3300027737	Bog Forest Soil	FGKRFSTHNNRPAPVVQETCVRCYGTGRIRERGERLICKACAGTGRVAAIKDRAS
Ga0209908_100159091	3300027745	Thawing Permafrost	VQNKGFKVEFGKRFSVHNNRPAPVVQETCVRCCGTGRIRERGNRILCKACAGTGRITVITNRAS
Ga0209580_106712301	3300027842	Surface Soil	MDFGKRLSVHTNRAPPVVQQTCVRCCGTGRVRERGERIVCKACAGTGRIDIKTDRAS
Ga0209517_101265473	3300027854	Peatlands Soil	MDFGKRFSRHNNRPAPVILQTCERCSGTGRVRERGHPITCKVCGGTGKVRAKMDRAS
Ga0209517_102315433	3300027854	Peatlands Soil	VEFGKRFSVHNNRPAPAVQQTCERCCGTGRVRERGNRIICKACAGTGRITVVAARSA
Ga0209380_107402191	3300027889	Soil	MVFGKRFSMHNDRAPHVIQETCVRCCGTGRIRERGDRIICKACAGTGRITVKADGDS
Ga0209624_101087102	3300027895	Forest Soil	VEFGKRFSVHNNRPAAAVQETCVRCCGTGRIRERGNRIICKPCAGTGRINVVKDRAS
Ga0209624_103712802	3300027895	Forest Soil	MVFGKRFSMHNDRAPHIVQETCVRCCGTGRIRERGDRIICKACAGTGRITAKADGDS
Ga0209415_108242081	3300027905	Peatlands Soil	MDFGKRFSRHNNRPAPVILQTCERCSGSGRVRERGHQITCKVCAGTGRVSAKMDRAS
Ga0209069_109475871	3300027915	Watersheds	MDFGKRFSMHNERPAAIVQETCLRCYGTGRVRERGNLLICKACAGTGRIIGKEERSA
Ga0209168_103701321	3300027986	Surface Soil	TLMDFGKRFSVHNRRPAPLVQQTCVRCCGTGRVRERGNRIICKACNGTGRTTALIGDRAS
Ga0308309_106029711	3300028906	Soil	VDFGKRFSTHNNRPAPAVQETCVRCCGAGRIRERGNRIICKTCAGTGRITVIKDRAS
Ga0308309_107169242	3300028906	Soil	MDFGKRFSMHNERPAAIVQETCLRCYGTGRVRERGNRLICKACAGTGRITGKEERSA
Ga0308309_116661322	3300028906	Soil	SVHNYRPAPVMQETCVRCCGTGRIRERGNRIICKPCAGTGRITVVKDRAS
Ga0311340_108538112	3300029943	Palsa	PVEFGKRFSMHNNRPAPVLQETCVRCCGTGRIRERGNRIICKACAGTGRLTVVKDRAS
Ga0311340_115342431	3300029943	Palsa	PSQIPRSKGLPVDFGKRRFSMHNDRVAPPAQETCVRCFGVGRIRERGNRILCKACAGTGRITVKPETAAAAASSA
Ga0311352_111802342	3300029944	Palsa	KSRRTKDFQVDFGKRRFSMHNDRVASPAQETCVRCFGVGRIRERGNRILCKTCAGTGRITVKTETAAAAASSA
Ga0311355_115439002	3300030580	Palsa	VEFGKRFSVHNNRPAPAVQETCVRCCGTGRVRERGNRIICKPCAGTGRITVVKERAS
Ga0311356_120388461	3300030617	Palsa	HNNRPAPVVQETCVRCCGTGRIRERGNRIICKACAGTGRLTVVKDRAS
Ga0310039_100832981	3300030706	Peatlands Soil	VEFGKRFSVHNNRPAPAVQQTCERCCGTGRVRERGNRIICKACAGTGR
Ga0170824_1203295422	3300031231	Forest Soil	MRMAFGRRFSMHNDRAPHVVQETCVRCCGTGRIRERGDRIVCKGCAGTGRITVKADGDS
Ga0302325_124329472	3300031234	Palsa	VEFGKRLSAHNDRAAPVVQQTCVRCCGTGRIRERGDRIICKTCGGTGRLNVITERAS
Ga0302320_105523444	3300031524	Bog	MEFGKRFSQHNGRPAPVIQETCVRCCGTGKIRERGDRIICKACAGAGRVVKTERSA
Ga0302326_106511462	3300031525	Palsa	VEFGKRFSVHNNRPAPAVQETCVRCCGTGRVRERGNRIICKPCAGTGRITVV
Ga0302326_137160861	3300031525	Palsa	FSVHNNRPAPAVQETCVRCCGTGRVRERGNRIICKPCAGTGRIAVVKERAS
Ga0310686_1047731122	3300031708	Soil	MHNDRVAPPVQETCVRCFGVGRIRERGNRILCKICAGTGRITVKTEDTAAAASSA
Ga0310686_1075251953	3300031708	Soil	MTFGKRFSIHNDRTPAVVQQTCVRCCGTGRIRERGNRIICKACAGTGRIAGTPGATP
Ga0310686_1093266281	3300031708	Soil	MVFGRRFSMHNDRAPHIVQETCVRCCGTGRIRERGDRIICKACAGTGRITVKADGDS
Ga0310686_1102473233	3300031708	Soil	VEFGKRFSQHNNRPAPVLQQTCVRCCGTGRIRERGERIICKACDGTGRTTVVAAAASSA
Ga0310686_1132785462	3300031708	Soil	VEFGKRFSQHNNRPALAVQETCVRCCGTGRIRERGDRIICKACAGTGRITVAAARAPSASSA
Ga0310686_1155673164	3300031708	Soil	MDFGKRFSVHNDRAPPVAQQTCVRCCGTGRVRERGERIVCKACAGTGRINIKTERAS
Ga0310686_1158534611	3300031708	Soil	MTFGKRFSIHNDRVAPVVQKTCVRCCGTGRVLERGNRIICRVCAGVGKVGAAMEQRA
Ga0310686_1197114311	3300031708	Soil	MEFGKRFSMHNDRTPKAVQQTCVRCCGTGRVRESGNRLVCQTCAGSGRTAVAEKRTA
Ga0307476_103613421	3300031715	Hardwood Forest Soil	MDFGKRFSVHNHRTPPVVQQTCVRCSGTGRVRERGNRIICKACGGSGKMNVKTGRAS
Ga0307474_112670751	3300031718	Hardwood Forest Soil	TKDIQMDFGKRRFSDHNNRPAPVIQQTCVRCCGTGHVRERGNRIVCKVCTGTGRTTAERDRAAQRA
Ga0307478_107732981	3300031823	Hardwood Forest Soil	FTNRAMQRIFDMDFGKRFSVHNNRAPPVIQQTCVRCCGTGHVRERGNRIVCKVCTGTGRTTAERDRAAQRA
Ga0311301_1001225621	3300032160	Peatlands Soil	MDFGKRFSKHNNRPAPVILQTCERCGGTGRVRERGHQITCKVCAGTGRVSAKMDRAS
Ga0311301_101389926	3300032160	Peatlands Soil	VDFGKRFSMHNNRPAPVVQETCVRCCGTGRIRERGDRIVCKACAGTGRIAVVTERASSA
Ga0335085_103313983	3300032770	Soil	MVFGKRFSMHNNRVAPIVQQTCVRCCGTGRIRERGNRIICKTCAGAGRINAAETEQAS
Ga0335078_1002665310	3300032805	Soil	MEFGKRRFSMHNDRQAPAAQETCVRCCGTGRVRERGNRISCKACKGTGRVNVAAERAH
Ga0335078_100661432	3300032805	Soil	MVFGKRFSIHNNRVAPVVQQTCVRCCGTGRVRERGNRIICKTCAGTGRTVVVPERA
Ga0335078_105639581	3300032805	Soil	MDFGKRRFSMHNGRVAPPVKQTCVRCSGTGHVRERGNLIVCKACAGSGRTMVVTHRAS
Ga0335078_112309371	3300032805	Soil	HNNRPAPVLQETCVRCCGTGRVRERGERIVCKVCAGTGRTTVKSDRSA
Ga0335078_112639472	3300032805	Soil	MAIQTVFGKRFSIHNNRVATVIQQTCVRCCGTGRVRERGNRIICKTCAGTGRTVVVPERA
Ga0335078_116922611	3300032805	Soil	MAIQMVFGKRFSIHNNRVATVIQQTCVRCCGTGRVRERGNRIICKTCAGTGRTVVVPERA
Ga0335078_125051652	3300032805	Soil	AIQMVFGKRFSIHNNRVATVIQQTCVRCCGTGRVRERGNRIICKTCAGTGRTVVVPERA
Ga0335081_102291201	3300032892	Soil	MDFGKRFSVHNNRAPPVVHQTCVRCSGTGHVRERGNRIICKACAGSGKINVKTDRAS
Ga0335081_103150823	3300032892	Soil	MEFGKRLSIDDRRAAPVLQQTCVRCCGTGRIRERGNRILCRACTGTGRTTVRTDDDC
Ga0335074_107382002	3300032895	Soil	MAIQMAFGKRFSIHNNRVATVIQQTCVRCCGTGRVRERGNRIICKTCAGTGRTVVVPERA
Ga0326728_100072388	3300033402	Peat Soil	MDFGKRRFSGHNDRPAPILQETCVRCCGTGRIRERGNRIICKVCTGTGRITVVRDRAS
Ga0371488_0270485_585_761	3300033983	Peat Soil	MDFGKRRFSMHNDRTAPAVQETCVKCYGTGRIRERGNRIICKTCAGSGRVTAVKERAS
Ga0370483_0109526_104_280	3300034124	Untreated Peat Soil	MIFGKRFSMHNNRPPVVMKETCVRCCGTGHIRERGNRLICKICSGTGRVTTVEPKQTA
Ga0370515_0095361_93_287	3300034163	Untreated Peat Soil	VDFGKRRFSKHNDRVAPPAQETCVRCFGVGRIRERGNRILCKACAGTGRITVKTENAAAAASGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060148

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences