Metagenome Family F060170

Basic Information
Family ID	F060170
Family Type	Metagenome
Number of Sequences	133
Average Sequence Length	50 residues
Representative Sequence	MLTIPQIEALRKTNPQLYETLKRLAGASLGPNQGWSLDDQITDG
Number of Associated Samples	97
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	48.09 %
% of genes near scaffold ends (potentially truncated)	96.99 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Most Common Taxonomy
Group	Unclassified (55.639 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil (16.541 % of family members)
Environment Ontology (ENVO)	Unclassified (30.827 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.429 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.89% β-sheet: 2.78% Coil/Unstructured: 58.33%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF02452	PemK_toxin	5.26
PF13442	Cytochrome_CBB3	2.26
PF02574	S-methyl_trans	1.50
PF00561	Abhydrolase_1	1.50
PF01541	GIY-YIG	0.75
PF01972	SDH_sah	0.75
PF08386	Abhydrolase_4	0.75
PF02136	NTF2	0.75
PF00199	Catalase	0.75
PF01797	Y1_Tnp	0.75
PF07228	SpoIIE	0.75
PF03264	Cytochrom_NNT	0.75
PF13358	DDE_3	0.75
PF02472	ExbD	0.75
PF01042	Ribonuc_L-PSP	0.75
PF00578	AhpC-TSA	0.75
PF13646	HEAT_2	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	5.26
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.50
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	1.50
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	1.50
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.75
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.75
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	0.75
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.75
COG3005	Tetraheme cytochrome c subunit NapC of nitrate or TMAO reductase	Energy production and conversion [C]	0.75

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.64 %
All Organisms	root	All Organisms	44.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.64 %
cellular organisms	root	All Organisms → cellular organisms	44.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.64 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	39.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.64 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.76 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.75 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.76 %
Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_52_10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_52_10	0.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.75 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10174841	Not Available	560	Open in IMG/M
3300002245\|JGIcombinedJ26739_100694665	All Organisms → cellular organisms → Bacteria → Acidobacteria	895	Open in IMG/M
3300003350\|JGI26347J50199_1006198	All Organisms → cellular organisms → Bacteria → Acidobacteria	1137	Open in IMG/M
3300004080\|Ga0062385_10104745	Not Available	1377	Open in IMG/M
3300004080\|Ga0062385_10306928	All Organisms → cellular organisms → Bacteria → Acidobacteria	912	Open in IMG/M
3300004080\|Ga0062385_11106219	Not Available	537	Open in IMG/M
3300004080\|Ga0062385_11216230	Not Available	516	Open in IMG/M
3300004082\|Ga0062384_101453794	Not Available	506	Open in IMG/M
3300004092\|Ga0062389_100053099	All Organisms → cellular organisms → Bacteria → Acidobacteria	3255	Open in IMG/M
3300004092\|Ga0062389_102344096	Not Available	705	Open in IMG/M
3300004092\|Ga0062389_103505493	Not Available	588	Open in IMG/M
3300004092\|Ga0062389_103694040	Not Available	574	Open in IMG/M
3300004092\|Ga0062389_103837352	Not Available	564	Open in IMG/M
3300004092\|Ga0062389_104308628	Not Available	535	Open in IMG/M
3300004152\|Ga0062386_101713612	Not Available	524	Open in IMG/M
3300004635\|Ga0062388_102605800	Not Available	531	Open in IMG/M
3300005434\|Ga0070709_10232402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1320	Open in IMG/M
3300005538\|Ga0070731_10436256	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300005538\|Ga0070731_10473552	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300005538\|Ga0070731_11106280	Not Available	524	Open in IMG/M
3300005541\|Ga0070733_10226291	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300005542\|Ga0070732_10884506	Not Available	545	Open in IMG/M
3300005610\|Ga0070763_10379252	Not Available	791	Open in IMG/M
3300005712\|Ga0070764_10550258	Not Available	699	Open in IMG/M
3300005881\|Ga0075294_1006217	Not Available	894	Open in IMG/M
3300006176\|Ga0070765_100150577	All Organisms → cellular organisms → Bacteria → Acidobacteria	2074	Open in IMG/M
3300006755\|Ga0079222_10357164	Not Available	991	Open in IMG/M
3300006804\|Ga0079221_10528091	All Organisms → cellular organisms → Bacteria → Acidobacteria	774	Open in IMG/M
3300006804\|Ga0079221_11244633	Not Available	581	Open in IMG/M
3300009623\|Ga0116133_1140309	Not Available	630	Open in IMG/M
3300009638\|Ga0116113_1055130	All Organisms → cellular organisms → Bacteria → Acidobacteria	922	Open in IMG/M
3300009839\|Ga0116223_10634944	Not Available	615	Open in IMG/M
3300010341\|Ga0074045_10521958	Not Available	762	Open in IMG/M
3300010343\|Ga0074044_10209619	Not Available	1293	Open in IMG/M
3300010343\|Ga0074044_10676911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300010379\|Ga0136449_100166019	All Organisms → cellular organisms → Bacteria → Acidobacteria	4287	Open in IMG/M
3300010396\|Ga0134126_12105115	Not Available	616	Open in IMG/M
3300011269\|Ga0137392_10963491	Not Available	701	Open in IMG/M
3300012683\|Ga0137398_10427291	Not Available	904	Open in IMG/M
3300012964\|Ga0153916_10588369	Not Available	1189	Open in IMG/M
3300012964\|Ga0153916_12351136	Not Available	600	Open in IMG/M
3300012964\|Ga0153916_13307475	Not Available	507	Open in IMG/M
3300014501\|Ga0182024_12726394	Not Available	528	Open in IMG/M
3300014838\|Ga0182030_10622285	Not Available	1035	Open in IMG/M
3300017823\|Ga0187818_10012468	All Organisms → cellular organisms → Bacteria → Acidobacteria	3644	Open in IMG/M
3300017823\|Ga0187818_10055526	All Organisms → cellular organisms → Bacteria → Acidobacteria	1703	Open in IMG/M
3300017924\|Ga0187820_1243448	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300017928\|Ga0187806_1268136	Not Available	595	Open in IMG/M
3300017933\|Ga0187801_10025434	All Organisms → cellular organisms → Bacteria → Acidobacteria	2045	Open in IMG/M
3300017944\|Ga0187786_10296864	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300017961\|Ga0187778_11251503	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300017970\|Ga0187783_11018651	Not Available	597	Open in IMG/M
3300017972\|Ga0187781_10028353	All Organisms → cellular organisms → Bacteria → Acidobacteria	3866	Open in IMG/M
3300017972\|Ga0187781_11080257	Not Available	588	Open in IMG/M
3300017975\|Ga0187782_10007948	All Organisms → cellular organisms → Bacteria	7838	Open in IMG/M
3300017988\|Ga0181520_10759085	Not Available	657	Open in IMG/M
3300018002\|Ga0187868_1264293	Not Available	576	Open in IMG/M
3300018006\|Ga0187804_10235777	All Organisms → cellular organisms → Bacteria → Acidobacteria	787	Open in IMG/M
3300018012\|Ga0187810_10185575	All Organisms → cellular organisms → Bacteria → Acidobacteria	843	Open in IMG/M
3300018014\|Ga0187860_1411839	Not Available	505	Open in IMG/M
3300018062\|Ga0187784_10527226	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300018085\|Ga0187772_10377900	All Organisms → cellular organisms → Bacteria → Acidobacteria	983	Open in IMG/M
3300020581\|Ga0210399_10270316	Not Available	1418	Open in IMG/M
3300020581\|Ga0210399_10789108	Not Available	776	Open in IMG/M
3300021088\|Ga0210404_10617802	Not Available	616	Open in IMG/M
3300021168\|Ga0210406_10481509	All Organisms → cellular organisms → Bacteria → Acidobacteria	984	Open in IMG/M
3300021168\|Ga0210406_10771048	Not Available	734	Open in IMG/M
3300021180\|Ga0210396_11641068	Not Available	524	Open in IMG/M
3300021181\|Ga0210388_10167190	All Organisms → cellular organisms → Bacteria → Acidobacteria	1916	Open in IMG/M
3300021181\|Ga0210388_11367299	Not Available	596	Open in IMG/M
3300021401\|Ga0210393_10169183	All Organisms → cellular organisms → Bacteria → Acidobacteria	1760	Open in IMG/M
3300021401\|Ga0210393_10245437	All Organisms → cellular organisms → Bacteria → Acidobacteria	1452	Open in IMG/M
3300021401\|Ga0210393_10301528	Not Available	1302	Open in IMG/M
3300021402\|Ga0210385_10551126	All Organisms → cellular organisms → Bacteria → Acidobacteria	877	Open in IMG/M
3300021407\|Ga0210383_11056250	Not Available	687	Open in IMG/M
3300021407\|Ga0210383_11657949	Not Available	525	Open in IMG/M
3300021432\|Ga0210384_11663518	Not Available	544	Open in IMG/M
3300021433\|Ga0210391_10076785	All Organisms → cellular organisms → Bacteria → Acidobacteria	2639	Open in IMG/M
3300021433\|Ga0210391_10640290	All Organisms → cellular organisms → Bacteria → Acidobacteria	834	Open in IMG/M
3300021474\|Ga0210390_10268331	All Organisms → cellular organisms → Bacteria → Acidobacteria	1445	Open in IMG/M
3300021474\|Ga0210390_10887949	Not Available	734	Open in IMG/M
3300021477\|Ga0210398_10376266	All Organisms → cellular organisms → Bacteria → Acidobacteria	1158	Open in IMG/M
3300021478\|Ga0210402_10306935	Not Available	1469	Open in IMG/M
3300022881\|Ga0224545_1000348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9948	Open in IMG/M
3300024227\|Ga0228598_1051061	Not Available	820	Open in IMG/M
3300025432\|Ga0208821_1030058	All Organisms → cellular organisms → Bacteria → Acidobacteria	1102	Open in IMG/M
3300027570\|Ga0208043_1147984	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300027575\|Ga0209525_1019653	All Organisms → cellular organisms → Bacteria → Acidobacteria	1654	Open in IMG/M
3300027635\|Ga0209625_1105952	Not Available	631	Open in IMG/M
3300027684\|Ga0209626_1076321	All Organisms → cellular organisms → Bacteria → Acidobacteria	856	Open in IMG/M
3300027737\|Ga0209038_10247393	Not Available	535	Open in IMG/M
3300027768\|Ga0209772_10024999	All Organisms → cellular organisms → Bacteria → Acidobacteria	1710	Open in IMG/M
3300027768\|Ga0209772_10068100	Not Available	1072	Open in IMG/M
3300027768\|Ga0209772_10118941	All Organisms → cellular organisms → Bacteria → Acidobacteria	819	Open in IMG/M
3300027768\|Ga0209772_10237464	Not Available	578	Open in IMG/M
3300027829\|Ga0209773_10171568	Not Available	905	Open in IMG/M
3300027829\|Ga0209773_10239271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300027829\|Ga0209773_10408538	Not Available	563	Open in IMG/M
3300027842\|Ga0209580_10512495	Not Available	597	Open in IMG/M
3300027853\|Ga0209274_10543599	Not Available	602	Open in IMG/M
3300027867\|Ga0209167_10336237	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300027869\|Ga0209579_10638577	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300027895\|Ga0209624_10786769	Not Available	625	Open in IMG/M
3300028731\|Ga0302301_1003060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5496	Open in IMG/M
3300028747\|Ga0302219_10432063	Not Available	516	Open in IMG/M
3300028775\|Ga0302231_10123303	Not Available	1081	Open in IMG/M
3300028780\|Ga0302225_10012456	All Organisms → cellular organisms → Bacteria → Acidobacteria	4408	Open in IMG/M
3300028789\|Ga0302232_10104295	All Organisms → cellular organisms → Bacteria → Acidobacteria	1450	Open in IMG/M
3300028871\|Ga0302230_10132705	All Organisms → cellular organisms → Bacteria → Acidobacteria	981	Open in IMG/M
3300028879\|Ga0302229_10247072	Not Available	808	Open in IMG/M
3300028906\|Ga0308309_10755904	Not Available	845	Open in IMG/M
3300028906\|Ga0308309_10970138	Not Available	737	Open in IMG/M
3300029943\|Ga0311340_11368400	Not Available	561	Open in IMG/M
3300030058\|Ga0302179_10114395	All Organisms → cellular organisms → Bacteria → Acidobacteria	1191	Open in IMG/M
3300030509\|Ga0302183_10023233	All Organisms → cellular organisms → Bacteria → Acidobacteria	2540	Open in IMG/M
3300030509\|Ga0302183_10033985	All Organisms → cellular organisms → Bacteria → Acidobacteria	2058	Open in IMG/M
3300031250\|Ga0265331_10542122	Not Available	524	Open in IMG/M
3300031708\|Ga0310686_119296508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2338	Open in IMG/M
3300031708\|Ga0310686_119918694	Not Available	508	Open in IMG/M
3300031715\|Ga0307476_10983811	Not Available	621	Open in IMG/M
3300031753\|Ga0307477_10632170	Not Available	720	Open in IMG/M
3300031754\|Ga0307475_11433817	Not Available	531	Open in IMG/M
3300032160\|Ga0311301_10148226	All Organisms → cellular organisms → Bacteria → Acidobacteria	4259	Open in IMG/M
3300032805\|Ga0335078_10761811	All Organisms → cellular organisms → Bacteria → Acidobacteria	1188	Open in IMG/M
3300032805\|Ga0335078_12412923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_52_10	546	Open in IMG/M
3300032828\|Ga0335080_10089347	All Organisms → cellular organisms → Bacteria → Acidobacteria	3417	Open in IMG/M
3300032892\|Ga0335081_10648251	All Organisms → cellular organisms → Bacteria → Acidobacteria	1292	Open in IMG/M
3300033134\|Ga0335073_10196775	All Organisms → cellular organisms → Bacteria → Acidobacteria	2506	Open in IMG/M
3300033134\|Ga0335073_11008199	Not Available	861	Open in IMG/M
3300033158\|Ga0335077_11850973	Not Available	565	Open in IMG/M
3300033828\|Ga0334850_064680	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.50%
Host-Associated	Host-Associated	1.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.92%
Aquatic	Environmental → Aquatic	28.57%
Plants	Host-Associated → Plants	1.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.15%
Freshwater	Environmental → Aquatic → Freshwater	28.57%
Peat	Environmental → Terrestrial → Peat	9.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	28.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.29%
Loam	Environmental → Terrestrial → Soil → Loam	9.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	18.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.05%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.02%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.26%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.51%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.26%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	16.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.79%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.02%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.02%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.51%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.51%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.01%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.26%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.26%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.50%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.75%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.75%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.75%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.75%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003350	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005881	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_202	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025432	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028871	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033828	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_101748412	3300001471	Forest Soil	MLNISQLEALRRTNPQLYEAMKRLAEASLGPNQGWSIDNQ
JGIcombinedJ26739_1006946652	3300002245	Forest Soil	MLTVPQIEAFRKTNPQLYETRKRLAGASSGPKQGSGLD
JGI26347J50199_10061984	3300003350	Bog Forest Soil	MLNVPQIEALRKENPHLYEALTAIAQASLGPNQGWSLDNQITDGVNYSRVT
Ga0062385_101047452	3300004080	Bog Forest Soil	MLTVPQIEALRKANPQLCEMMKPLARASIAANRGWIIRER*
Ga0062385_103069281	3300004080	Bog Forest Soil	MLNVPQIEALRQTNPQLYEALKRVANAALGPNQGWNLDEQV
Ga0062385_111062192	3300004080	Bog Forest Soil	MLTVPQIEALRRANPQLYEAMKRLANASLGPNQGWSLDDQ
Ga0062385_112162302	3300004080	Bog Forest Soil	MLNISQIEALRRTNPQLYEAMQRLAAASLGPNQGWSIDSQITDGTNFARVT
Ga0062384_1014537941	3300004082	Bog Forest Soil	MLTVPQIESLRRTNPQLYEALKRLAEASLGPNQGWSIDDQITDGSLFARVTSGALTAG
Ga0062389_1000530995	3300004092	Bog Forest Soil	MLNIQQIEALRKANPQLYETLKRLAGASLGPNQGWSLDNQITDGTNFARVVT
Ga0062389_1023440961	3300004092	Bog Forest Soil	MLNVPQIEALRKENPHLYEALTSIAQASLGPNQGWSLDNQITDGVNYSRVSSGATTAGKIDPTKTG
Ga0062389_1035054932	3300004092	Bog Forest Soil	MLTVPQIEALRKTNPQLYEALKRVAGASLGPHQGWSLDDQITDGS
Ga0062389_1036940402	3300004092	Bog Forest Soil	MLTIPQIELLRKANTQLFEALKRLSAASLGPDQRWSLDNQIIDGTR*
Ga0062389_1038373522	3300004092	Bog Forest Soil	MLTIPQIEALRNSDPQLYETLKRLAGASLGPNQGWSLDEQVTDGVNFARVASGALTAGKIDP
Ga0062389_1043086281	3300004092	Bog Forest Soil	MLTIPQIEALRKTNPQLYEALKRVAGASLGPNQGWSLDNQV
Ga0062386_1017136121	3300004152	Bog Forest Soil	MLNVPQIEALRKENPHLYEALTSIAQASLGPNQGWSLDNQITDGANYSRVSSGAITA
Ga0062388_1026058002	3300004635	Bog Forest Soil	MAMLTIPQIEALRNSDPQLYETLKRLAGASLGPNQGWSLDEQVTDGVNFARVASGALTAGKIDP
Ga0070709_102324021	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLTVPQIESLRTSNPQLYEALKRLAEASLGPNQGWSLDDQITDGSLFARVTSGAL
Ga0070731_104362562	3300005538	Surface Soil	MLTVPQIEALRKTNPQLYESLKRLAGASLGPNQGWSLDSQITDGNDYARVVSGALTSGQIDPT
Ga0070731_104735522	3300005538	Surface Soil	MLTIPQIEALRKTNPQLYETLKRLAGATLGPNQGWSLDNQITDG
Ga0070731_111062802	3300005538	Surface Soil	MLNISQLEALRRANPQLYEAMKKLAEASLGPNQGWSIDSQITDGTNFARVTSGALTGNHIDPSKP
Ga0070733_102262912	3300005541	Surface Soil	MLNIPQIEALRRSNPRLYEALKRLSDASLGPNQGWSLDNQI
Ga0070732_108845062	3300005542	Surface Soil	MLTVPQIESLRTSNPQLYEALKRLAEASLGPNQGWSLD
Ga0070763_103792521	3300005610	Soil	MLTVPQIESLRTSNPQLYEALKRLAEASLGPNQGWSLDDQITDGSLFA
Ga0070764_105502582	3300005712	Soil	MLTVPQIEALRETNPQLYEAMKRLANASLGPNQGWSLDNQVTDGADYARVSSAALTGNK
Ga0075294_10062172	3300005881	Rice Paddy Soil	MLTIPQIEALRKTNPQLYETLKRLVGASLGPNQGWSLDHQITD
Ga0070765_1001505771	3300006176	Soil	MLNISQIEALRRTNPQLYEAMQRLAAASLGPNQGWSIDSQITDGT
Ga0079222_103571641	3300006755	Agricultural Soil	MLTIPQIEALRTTNPQLYESLKRLAGASLGPNQGWSLDNQITDGSNYARVAS
Ga0079221_105280912	3300006804	Agricultural Soil	MLTISQIEALRKTSPQLYEAMKRLAGATLGPNQGWSLDSQVTDG
Ga0079221_112446331	3300006804	Agricultural Soil	MLNIPQIEALRRSNPQLYEALKRLSEASLGPNQGWSLDDQITDGADYARVV
Ga0116133_11403093	3300009623	Peatland	MLTVPQIEALRQTNPQLYESLKRLAGASLGPNQGWSLDNQITDGT
Ga0116113_10551301	3300009638	Peatland	MLTVPQIEALRQTNPQLYESLKRLAGASLGPNQGWSL
Ga0116223_106349443	3300009839	Peatlands Soil	MLTVPQIEALRQTNPQLYESLKRLAGASLGPNQGWSLDNQITD
Ga0074045_105219581	3300010341	Bog Forest Soil	MLTVPQIEALRQTSPQLYESLKRLAGASLGPNQGWSLDNQITDGANYARV
Ga0074044_102096192	3300010343	Bog Forest Soil	MLNIQQIEALRKTNPQLYETLKRLAGATLGPNQGWS
Ga0074044_106769113	3300010343	Bog Forest Soil	MLNVPQIEALRKENPHLYEALTAIAQASLGPNQGW
Ga0136449_1001660194	3300010379	Peatlands Soil	MLNIQQIEALRKANPQLYETLKRLAGASLGPNQGWSLDNQITDGTDFARVVTGAL
Ga0134126_121051152	3300010396	Terrestrial Soil	MLTIPQIEALRTTNPQLYESLKRLAGASLGPNQGWSLDSQITDGDNYARVVSGALTS
Ga0137392_109634912	3300011269	Vadose Zone Soil	MLTVPQIEALRRTNPQLYEALKRLADVSLGPNQRWSLDDQITDGSNYARIAATALTAGKLDP
Ga0137398_104272911	3300012683	Vadose Zone Soil	MLTVPQIESLRTSNPQLYEALKRLAEASLGPNQGWSLDDQITDGSLFARVTSGALTG
Ga0153916_105883691	3300012964	Freshwater Wetlands	MLTIPQIEALRQTNPQLYEALKRLAGASLGPNQGWSLDHQITDGANYARVVS
Ga0153916_123511362	3300012964	Freshwater Wetlands	MLTIPQIEALRKTNPQLYEALKRLAGGSLGPNQGWSLDHQITDG
Ga0153916_133074752	3300012964	Freshwater Wetlands	MLTIPQIEALRQTNPQLYEALKRLAGASLGPNQGWSLDHQITDGANYARVVSG
Ga0182024_127263941	3300014501	Permafrost	MLTIPQIEALRKANPQLYEALKRVAGASLGPNQGWSLDNQVTDGANFARVAAGALTEGNVDP
Ga0182030_106222853	3300014838	Bog	MLTVPQIEALRQTNPQLYESLKRLAGASLGPNQGWSLD
Ga0187818_100124684	3300017823	Freshwater Sediment	MLTVPQIEALRRANPQLYEAMKRLADASLGPNQGWSLDNQ
Ga0187818_100555263	3300017823	Freshwater Sediment	MLNIQQIEALRKANPQLYEALKRLAGASLGPNQGWSLDN
Ga0187820_12434482	3300017924	Freshwater Sediment	MLNIQQIEALRKANPQLYEALKRLAGASLGPNQGWSLDNQITDGANFARVSSN
Ga0187806_12681362	3300017928	Freshwater Sediment	MLTVPQIEALRRTNPQLYEALNRLAEASLGPNQGWNLDEQVTDGTNYARVAAGALTEGKIDP
Ga0187801_100254341	3300017933	Freshwater Sediment	MLTVPQIEALRRTNPQLYETLKRLAEASLGPNQGWNLDQQVTDGTNYARVVAGALT
Ga0187786_102968641	3300017944	Tropical Peatland	MLTIPQIEALRKTNPQLYEALKRLAGASLGPNQGWSLDDQITDGAKFA
Ga0187778_112515032	3300017961	Tropical Peatland	MLTVPQIEALRKTNPQLYEALRRLAGASLGPNQGWSLDHQVNDGTNFARVVASAL
Ga0187783_110186513	3300017970	Tropical Peatland	MLTVPQIEALRRTNPQLYEALKRLANASLGPNQGWSLDDQVNDGTNFARVSSSALTSNKLDPSRP
Ga0187781_100283531	3300017972	Tropical Peatland	MLNIQQIEALRRSNPALYEALKRLAGATLGPNQGWSLDNQITDGANFARVSSSALTSN
Ga0187781_110802571	3300017972	Tropical Peatland	MLNIQQIEALRKANPQLYEALKRLAGATLGPNQGWSLDNQITDGANFARVSSSALTSN
Ga0187782_100079481	3300017975	Tropical Peatland	MLNIQQIEALRKANPQLYEALKRLAGATLGPNQGWSLDNQITDGSNFARVSSSALTSNQIDPTKSG
Ga0181520_107590851	3300017988	Bog	MLTVPQIEALRQTNTQLYESLKRLAVASLGPNQGWSLDNQITDGTNYARVATGALTAGNVDPSK
Ga0187868_12642931	3300018002	Peatland	MLTVPQIEALRKTNPQLYEALTRLAGASLGPNQGWSLDDQITDGTNYAR
Ga0187804_102357771	3300018006	Freshwater Sediment	MLNIQQIEALRKANPQLYEALKRLAGASLGPNQGWSLDSQITDGANFARVSSNALTSNQIDPTKSG
Ga0187810_101855752	3300018012	Freshwater Sediment	MLTVPQIEALRRTNPQLYETLKRLAEASLGPNQGWNLDQQVTNGTNYA
Ga0187860_14118392	3300018014	Peatland	MLTVPQIEALRRTNPQLYEALKRLAGASLGPNQGWSIDDQMTDGTNYARVVTGALT
Ga0187784_105272262	3300018062	Tropical Peatland	MLNIQQIEALRKANPQLYEALKRLAGASLGPNQGWSIDNQITDGTNFARVS
Ga0187772_103779003	3300018085	Tropical Peatland	MLNIQQIEALRKANPQLYEALKRLAGATLGPNQGWSLD
Ga0210399_102703161	3300020581	Soil	MLTVPQIESLRTSNPQLYEALKRLAEASLGPNQGWSLDDQ
Ga0210399_107891081	3300020581	Soil	MLNVPQIEALRKQNPHLYEALTAIAQASLGPNQGWSLDNQITDGVDYSRVTSGAVTAGKIDPT
Ga0210404_106178023	3300021088	Soil	MLTVPQIEALRSSNPQLYEALKRLATASLGPNQGWSLDHQVTD
Ga0210406_104815091	3300021168	Soil	MLNVPQIEALRQTNPQLYEALKRVANAALGPNQGWNLDEQVTDGVQYARVSTGA
Ga0210406_107710483	3300021168	Soil	MLTVPQIESLRTSNPQLYEALKRLAEASLGPNQGWSLDDQITDG
Ga0210396_116410681	3300021180	Soil	MLTVPQIESLRTSNPQLYEALKRLAEASLGPNQGWSLDDQITD
Ga0210388_101671901	3300021181	Soil	MLNISQLEALRRTNPQLYEAMKRLAEASLGPNQGWSIDNQITDGTNFARVTSG
Ga0210388_113672991	3300021181	Soil	MLNVPQIESLRETNPQLYEAMKRLAQASLGPNQGWSLDDQIADGTNYARVTSSALTSNKVDPTKTGVL
Ga0210393_101691831	3300021401	Soil	MLNISQLEALRRTNPQLYEAMKRLAEASLGPNQGWSIDNQITDGTNFARVTSGA
Ga0210393_102454371	3300021401	Soil	MLNVPQIEALRKENPHLYEALTSLAQASLGPNQGWSLDNQITDGANYSRVTSGAI
Ga0210393_103015284	3300021401	Soil	VSQWLRGPNKMLTVPQIESLRTSNPQLYEALKRLAEASLGPNQGWSLDDQ
Ga0210385_105511261	3300021402	Soil	MLTIPQIEALRKTNPQLYETLKRLAGASLGPNQGWSLDSQITDGANFARVSSAALTSNQIDPTKTG
Ga0210383_110562502	3300021407	Soil	MLNISQLEALRRANPQLYEAMKRLAEASLGPNQGWNIDSQITDGTNFARVTSGALTGNHIDPSKPG
Ga0210383_116579491	3300021407	Soil	MLNVPQIEALRKENPHLYEALTSIAQASLGPNQGWSLDNQITDGVNYSRVSSGATTAGKIDPTK
Ga0210384_116635181	3300021432	Soil	MLTVPQIESLRTSNPQLYEALKRLAEASLGPNQGWSLDDQI
Ga0210391_100767852	3300021433	Soil	MLNVPQIEALRKENPHLYEALTSIALASLGPNQGWSLDNQITDGVNYSRVTSGAITAGKIDP
Ga0210391_106402901	3300021433	Soil	MLNISQLEALRRANPQLYEAMKRLAEASLGPNQGWSIDSQITD
Ga0210390_102683311	3300021474	Soil	MLNVPQIEALRKENPHLYEALTSIAQASLGPNQGWSLDNQITDGVNYSRV
Ga0210390_108879491	3300021474	Soil	MLTVPQIESLRTSNPQLYEALKRLAEASLGPNQGW
Ga0210398_103762661	3300021477	Soil	MLNVPQIEALRQTNPQLYEALKRVANAALGPNQGW
Ga0210402_103069353	3300021478	Soil	MLTVPQIESLRTSNPQLYEALKRLAEASLGPNQGWSLDD
Ga0224545_10003488	3300022881	Soil	MLNISQIEALRRTNPQLYEAMKRLAEASLGPNQGWSID
Ga0228598_10510611	3300024227	Rhizosphere	MLNVPQIEALRKENPHLYEALTSIAQASLGPNQGWSLDNQITDGVNYSRVTSGAITAGQ
Ga0208821_10300581	3300025432	Peatland	MLTVPQIEALRKTNPQLYEALTRLAGASLGPNQGWSLDDQITDGTNYARVVSGAL
Ga0208043_11479841	3300027570	Peatlands Soil	MLTVPQIEALRKTNPQLYEALKRLAGASLGPNQGWSLDDQITDGTNYARVVSGALTAGQI
Ga0209525_10196531	3300027575	Forest Soil	MLNVPQIEALRQTNPQLYEALKRVANAALGPNQGWN
Ga0209625_11059522	3300027635	Forest Soil	MLTVPQIEALRSSNPQLYEALKRLANASLGPNQGWSLDHQVTDGADFARVVTGALTAGKIDPT
Ga0209626_10763212	3300027684	Forest Soil	MLNISQLESLRRANPQLYEAMKRLAEASLGPNQGWSIDNQITDGTNFARVTSGALTGN
Ga0209038_102473932	3300027737	Bog Forest Soil	MLTVPQIEALRRTNPQLYEALKRLAEASLGPNQGWSLDNQITDGTNYARVLSGALT
Ga0209772_100249991	3300027768	Bog Forest Soil	MLNVPQIEALRKENPHLYEALTSIAQASLGPNQGWSLDNQVTDGVNYSRVSS
Ga0209772_100681001	3300027768	Bog Forest Soil	MLSIQQIEALRKTNPQLYEALKRLGGASLGPNQGWSLDNQITDGANFARVAATA
Ga0209772_101189412	3300027768	Bog Forest Soil	MLNIPQIEALRQTNPQLYEALKRVAQASLGPNQGWSLDEQVTDGVN
Ga0209772_102374642	3300027768	Bog Forest Soil	VLNVPQIEALRKLNPHLYEALTAIAQASLGPNQGWSLDHQITDGVDYSRVTSGAV
Ga0209773_101715682	3300027829	Bog Forest Soil	MLSIQQIEALRKTNPQLYEALKRLGGASLGPNQGWSLDNQITDGT
Ga0209773_102392713	3300027829	Bog Forest Soil	MLNVPQIEALRKENPHLYEALTSIAQASLGPNQGWSLDNQITDG
Ga0209773_104085381	3300027829	Bog Forest Soil	MLNIQQIEALRKANPQLYETLKRLAGASLGPNQGWSLDNQITDGT
Ga0209580_105124952	3300027842	Surface Soil	MLTVPQIESLRTSNPQLYEALKRLAEASLGPNQGWSLDDQITDGSLFAR
Ga0209274_105435991	3300027853	Soil	MLNISQLEALRRTNPQLYEAMKKLAEASLGPNQGWSIDNQITDG
Ga0209167_103362371	3300027867	Surface Soil	MLTIPQIEALRKTNPQLYETLKRLAGASLGPNQGWSLDDQITDG
Ga0209579_106385772	3300027869	Surface Soil	MLTIPQIESLRTSNPQLYESLKRLAGASLGPNQGWSLDNQI
Ga0209624_107867691	3300027895	Forest Soil	MLNVPQIEALRKENPHLYEALTSIAQASLGPNQGWSLDN
Ga0302301_10030601	3300028731	Palsa	MLNISQIEALRRTNPQLYEAMKRLAEASLGPNQGWSIDSQITDGTNFARVTSGALTGNRIDPTKAG
Ga0302219_104320632	3300028747	Palsa	MLNISQIEALRRTNPQLYEAMQRLAAASLGPNQGWNIDSQITDGTNFARVTSGALTGNRIDPT
Ga0302231_101233032	3300028775	Palsa	MLNIPQIEALRRANPQLYEAMKRLAEASLGPNQGWSLDSQITDGTDFARVASSALTSNQIDPKK
Ga0302225_100124564	3300028780	Palsa	MLNIPQIEALRRANPQLYEAMKRLAEASLGPNQGWSLDS
Ga0302232_101042954	3300028789	Palsa	MLNISQIEELRRTNPQLYEAMKRLAEASLGPNQGWSI
Ga0302230_101327053	3300028871	Palsa	MLNISQIEALRRTNPQLYEAMKRLAEASLGPNQGWSIDSQITDGTK
Ga0302229_102470721	3300028879	Palsa	MLNIPQIEALRRANPQLYEAMKRLAEASLGPNQGWSLDSQI
Ga0308309_107559041	3300028906	Soil	MLTVPQIESLRSTNPQLYEALKRLAEASLGPNQGWSIDDQITDGSLFARVTSG
Ga0308309_109701383	3300028906	Soil	MLTVPQIESLRTSNPQLYEALKRLAEASLGPNQGWSLDDQIT
Ga0311340_113684001	3300029943	Palsa	MLNVQQIEALRATNPQLYETLKRLAGASLGPNQGWSMDEQITDGTNY
Ga0302179_101143952	3300030058	Palsa	MLNIQQIEALRKANPQLYETLKRLAGASLGPNQGWSLDNQITDGTNYARV
Ga0302183_100232331	3300030509	Palsa	MLNVPQIEALRQTNPQLYEALKRVANAALGPNQGWNLDEQVTDGVQYARVSTGAT
Ga0302183_100339851	3300030509	Palsa	MLNIQQIEALRKANPQLYETLKRLAGASLGPNQGWSL
Ga0265331_105421221	3300031250	Rhizosphere	MLTVPQIEALRQTNPQLYESLKRLAGASLGPNQGWSLDNQITDGANYARVASGALTAGN
Ga0310686_1192965085	3300031708	Soil	MLNVPQIEALRKQNPHLYEALTAIAQASLGPNQGWSLDNQITDGVNYSRV
Ga0310686_1199186942	3300031708	Soil	MLNISQLEALRRANPQLYEAMKRLAEASLGPNQGWSIDSQIADGTNFARVTSGALTANHIDPSK
Ga0307476_109838111	3300031715	Hardwood Forest Soil	MLNVPQIEALRKENPHLYEALTSIAQASLGPNQGWSMDNQITDGVN
Ga0307477_106321703	3300031753	Hardwood Forest Soil	MLTVPQIESLRRTNPQLYEALKRLAEASLGPNQGWSLDDQI
Ga0307475_114338172	3300031754	Hardwood Forest Soil	MLTIPQIEALRETNPQLYEALKRLAGASLGPNQGWNLDEQVTDGANFARVVTGALTAGKVDP
Ga0311301_101482264	3300032160	Peatlands Soil	MLNIQQIEALRKANPQLYETLKRLAGASLGPNQGWSLDNQITDGTDFARV
Ga0335078_100017232	3300032805	Soil	MLNIQQIETLRRTNPQLYETLERLAGASLDPNQGWSLDDQITDGTNVARLVACTN
Ga0335078_107618111	3300032805	Soil	MLTVPQIEALRKTNPQLYEALRRVAGASLGPNQGWSLDD
Ga0335078_124129231	3300032805	Soil	MLNIQQIEALRLSNPQLYEALKRLANASLGPNQGWSLDDQVTDGTN
Ga0335080_100893475	3300032828	Soil	MLNIQQIETLRKANPQLYEALKRLAGASLGPNQGWSLDDQITDGENFARVAATALTSNQIDPTKSGV
Ga0335081_106482514	3300032892	Soil	MLNIQQIEALRKANPQLYEALKRLAGASLGPNQGWSLDNQITDGANFARVSA
Ga0335081_124645991	3300032892	Soil	PLLLLTEAILTPMLNIQQIETLRRTNPQLYETLERLAGASLDPNQGWSLDDQITDGTNVARLVACTN
Ga0335073_101967751	3300033134	Soil	MLTVPQIEALRKANPQLYESLKRLAGASLGPNQGWSLDNQITDGTNYARVV
Ga0335073_110081991	3300033134	Soil	MLNIQQIEALRLSNPQLYEALKRLAGASLGPNQGWSHDDQ
Ga0335077_118509731	3300033158	Soil	MLNVSQIEALRQTNPQLYEAMKRLAGASLGPNQGWN
Ga0334850_064680_570_689	3300033828	Soil	MLNISQIEALRRTNPQLYEAMKRLAEASLGPNQGWSIDSQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F060170

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign