Metagenome / Metatranscriptome Family F060186

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060186
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	51 residues
Representative Sequence	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYADPSDRVLQFTTPEF
Number of Associated Samples	104
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.68 %
% of genes near scaffold ends (potentially truncated)	99.25 %
% of genes from short scaffolds (< 2000 bps)	93.98 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.496 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.579 % of family members)
Environment Ontology (ENVO)	Unclassified (42.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.609 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 49.38% β-sheet: 0.00% Coil/Unstructured: 50.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF02518	HATPase_c	6.77
PF13924	Lipocalin_5	6.02
PF13673	Acetyltransf_10	5.26
PF07007	LprI	3.01
PF12680	SnoaL_2	2.26
PF13414	TPR_11	2.26
PF00583	Acetyltransf_1	1.50
PF13302	Acetyltransf_3	1.50
PF13396	PLDc_N	1.50
PF00211	Guanylate_cyc	1.50
PF01872	RibD_C	1.50
PF06739	SBBP	1.50
PF12710	HAD	1.50
PF13418	Kelch_4	0.75
PF13602	ADH_zinc_N_2	0.75
PF03544	TonB_C	0.75
PF02371	Transposase_20	0.75
PF00144	Beta-lactamase	0.75
PF09413	DUF2007	0.75
PF03596	Cad	0.75
PF00498	FHA	0.75
PF12681	Glyoxalase_2	0.75
PF13242	Hydrolase_like	0.75
PF07883	Cupin_2	0.75
PF01548	DEDD_Tnp_IS110	0.75
PF13676	TIR_2	0.75
PF12697	Abhydrolase_6	0.75
PF14200	RicinB_lectin_2	0.75
PF01663	Phosphodiest	0.75
PF01513	NAD_kinase	0.75
PF16798	DUF5069	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG3755	Uncharacterized conserved protein YecT, DUF1311 family	Function unknown [S]	3.01
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.50
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.50
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.50
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.50
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.75
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.75
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.75
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.75
COG4300	Cadmium resistance protein CadD, predicted permease	Inorganic ion transport and metabolism [P]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.50 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.50 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.50 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	35.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.51 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.26 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	35.34 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.50 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.50 %
Unclassified	root	N/A	1.50 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	21.05 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.50 %
Unclassified	root	N/A	1.50 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.75 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.75 %
Aeromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales	0.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	19.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.50 %
Unclassified	root	N/A	1.50 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.75 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.75 %
Verrucomicrobia bacterium SCGC AG-212-E04	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AG-212-E04	0.75 %
Verrucomicrobia bacterium 13_2_20CM_2_54_15_9cls	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_2_54_15_9cls	0.75 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.75 %
Aeromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae	0.75 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	19.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.50 %
Unclassified	root	N/A	1.50 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.75 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	0.75 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	0.75 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.75 %
Verrucomicrobia bacterium SCGC AG-212-E04	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AG-212-E04	0.75 %
Verrucomicrobia bacterium 13_2_20CM_2_54_15_9cls	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_2_54_15_9cls	0.75 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	19.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.50 %
Unclassified	root	N/A	1.50 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.75 %
unclassified Rhizobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter	0.75 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	0.75 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.75 %
Verrucomicrobia bacterium SCGC AG-212-E04	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AG-212-E04	0.75 %
Verrucomicrobia bacterium 13_2_20CM_2_54_15_9cls	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_2_54_15_9cls	0.75 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	19.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.50 %
Unclassified	root	N/A	1.50 %
Rhizobacter sp. OV335	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. OV335	0.75 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.75 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	0.75 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.75 %
Verrucomicrobia bacterium SCGC AG-212-E04	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AG-212-E04	0.75 %
Verrucomicrobia bacterium 13_2_20CM_2_54_15_9cls	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_2_54_15_9cls	0.75 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0843123	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1197	Open in IMG/M
3300000891\|JGI10214J12806_10851838	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300000955\|JGI1027J12803_104638720	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300000955\|JGI1027J12803_105053439	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300002896\|JGI24802J43972_1023882	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300003203\|JGI25406J46586_10217227	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300004479\|Ga0062595_100343947	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300004643\|Ga0062591_101159676	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300005093\|Ga0062594_102008814	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300005181\|Ga0066678_10711571	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300005181\|Ga0066678_10903581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300005184\|Ga0066671_10071928	All Organisms → cellular organisms → Bacteria	1831	Open in IMG/M
3300005293\|Ga0065715_11149003	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005332\|Ga0066388_103145149	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300005332\|Ga0066388_106018759	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005447\|Ga0066689_10417009	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300005451\|Ga0066681_10560404	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005553\|Ga0066695_10150106	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300005557\|Ga0066704_11037887	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300005568\|Ga0066703_10815906	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AG-212-E04	533	Open in IMG/M
3300005764\|Ga0066903_101490623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	1276	Open in IMG/M
3300005764\|Ga0066903_102567015	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300005764\|Ga0066903_102748443	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M
3300005764\|Ga0066903_107072555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M
3300006034\|Ga0066656_10673826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	666	Open in IMG/M
3300006175\|Ga0070712_101863756	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	527	Open in IMG/M
3300006797\|Ga0066659_10313211	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300006797\|Ga0066659_10932639	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	725	Open in IMG/M
3300006800\|Ga0066660_10482659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300006800\|Ga0066660_10700888	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300009012\|Ga0066710_100525214	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300009012\|Ga0066710_102704184	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	707	Open in IMG/M
3300010048\|Ga0126373_12065253	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300010159\|Ga0099796_10211194	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	791	Open in IMG/M
3300010159\|Ga0099796_10278418	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300010303\|Ga0134082_10111640	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300010325\|Ga0134064_10404036	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	546	Open in IMG/M
3300010335\|Ga0134063_10098920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1322	Open in IMG/M
3300010364\|Ga0134066_10061219	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300010373\|Ga0134128_12247354	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300010401\|Ga0134121_12717336	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	540	Open in IMG/M
3300012198\|Ga0137364_11183443	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300012199\|Ga0137383_10289514	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1199	Open in IMG/M
3300012201\|Ga0137365_10436564	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300012202\|Ga0137363_10042546	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3208	Open in IMG/M
3300012202\|Ga0137363_11435290	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300012205\|Ga0137362_10080024	All Organisms → cellular organisms → Bacteria	2723	Open in IMG/M
3300012207\|Ga0137381_10401636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1196	Open in IMG/M
3300012208\|Ga0137376_11306990	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300012209\|Ga0137379_10173382	Not Available	2069	Open in IMG/M
3300012211\|Ga0137377_10386983	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1336	Open in IMG/M
3300012211\|Ga0137377_10688590	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300012285\|Ga0137370_10664519	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300012350\|Ga0137372_10283219	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300012350\|Ga0137372_10299125	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300012350\|Ga0137372_10368614	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300012350\|Ga0137372_10526577	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	876	Open in IMG/M
3300012351\|Ga0137386_10731368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_2_54_15_9cls	711	Open in IMG/M
3300012351\|Ga0137386_11035823	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300012354\|Ga0137366_10122420	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300012354\|Ga0137366_10329945	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300012356\|Ga0137371_10569636	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300012357\|Ga0137384_10599067	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300012357\|Ga0137384_11238056	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300012361\|Ga0137360_10267677	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300012362\|Ga0137361_10134681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2191	Open in IMG/M
3300012896\|Ga0157303_10278919	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300012925\|Ga0137419_11488600	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300012927\|Ga0137416_10529160	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300012927\|Ga0137416_11908991	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300012929\|Ga0137404_10046953	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3290	Open in IMG/M
3300012929\|Ga0137404_10356228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1282	Open in IMG/M
3300012930\|Ga0137407_10705363	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	950	Open in IMG/M
3300012944\|Ga0137410_11095863	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300012944\|Ga0137410_11692367	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300012986\|Ga0164304_11786879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	514	Open in IMG/M
3300013096\|Ga0157307_1029697	Not Available	944	Open in IMG/M
3300013296\|Ga0157374_10721050	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300014157\|Ga0134078_10409072	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300014166\|Ga0134079_10696074	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300015053\|Ga0137405_1201456	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	526	Open in IMG/M
3300015242\|Ga0137412_10182301	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1683	Open in IMG/M
3300015359\|Ga0134085_10410664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. OV335	609	Open in IMG/M
3300015371\|Ga0132258_13537084	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300015372\|Ga0132256_103679399	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	516	Open in IMG/M
3300015374\|Ga0132255_101258962	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1115	Open in IMG/M
3300016341\|Ga0182035_12158663	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300016357\|Ga0182032_11478180	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300016387\|Ga0182040_10467529	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300017659\|Ga0134083_10103141	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1126	Open in IMG/M
3300018000\|Ga0184604_10211771	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	668	Open in IMG/M
3300018000\|Ga0184604_10257256	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300018000\|Ga0184604_10358810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300018071\|Ga0184618_10290455	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300019866\|Ga0193756_1048612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	581	Open in IMG/M
3300019886\|Ga0193727_1006069	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4872	Open in IMG/M
3300019886\|Ga0193727_1050945	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1336	Open in IMG/M
3300019887\|Ga0193729_1001438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	12174	Open in IMG/M
3300020000\|Ga0193692_1126195	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	513	Open in IMG/M
3300020005\|Ga0193697_1129128	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300020006\|Ga0193735_1057021	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300020006\|Ga0193735_1155322	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300020006\|Ga0193735_1164257	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300020008\|Ga0193757_1025845	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	585	Open in IMG/M
3300021080\|Ga0210382_10094383	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1240	Open in IMG/M
3300021086\|Ga0179596_10541453	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300021413\|Ga0193750_1078154	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300021560\|Ga0126371_12446940	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300022534\|Ga0224452_1196610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	620	Open in IMG/M
3300022694\|Ga0222623_10174607	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300022756\|Ga0222622_10088361	All Organisms → cellular organisms → Bacteria	1873	Open in IMG/M
3300022756\|Ga0222622_11133474	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300024347\|Ga0179591_1085040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2935	Open in IMG/M
3300026330\|Ga0209473_1079705	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1383	Open in IMG/M
3300026523\|Ga0209808_1114242	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300026547\|Ga0209156_10345074	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300026548\|Ga0209161_10140023	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300026552\|Ga0209577_10281997	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300026557\|Ga0179587_10235012	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1170	Open in IMG/M
3300026557\|Ga0179587_10777858	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300027876\|Ga0209974_10302297	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300028536\|Ga0137415_10499768	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300028814\|Ga0307302_10226143	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300028878\|Ga0307278_10047374	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300028884\|Ga0307308_10546770	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300030841\|Ga0075384_11184243	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300030967\|Ga0075399_11156458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	588	Open in IMG/M
3300031231\|Ga0170824_112767651	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300031231\|Ga0170824_126821304	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300031890\|Ga0306925_10532065	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1248	Open in IMG/M
3300031954\|Ga0306926_11825102	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300032035\|Ga0310911_10365715	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300032261\|Ga0306920_100621783	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1597	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.74%
Host-Associated	Host-Associated	5.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.97%
Aquatic	Environmental → Aquatic	6.77%
Plants	Host-Associated → Plants	5.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.97%
Sediment	Environmental → Aquatic → Sediment	6.02%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.50%
Freshwater	Environmental → Aquatic → Freshwater	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.02%
Loam	Environmental → Terrestrial → Soil → Loam	5.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	54.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.05%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.51%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.51%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.01%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.50%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002896	Soil microbial communities from Manhattan, Kansas, USA - Sample 300um Nextera	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020008	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030841	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_08431233	2228664021	Soil	MKLILAVLALITAGSAXADXPKAADWARXXYSKHYSF
JGI10214J12806_108518381	3300000891	Soil	MKLILAVLALITAGSAAADCPKAADWARKFYSEHYSFYAEQSDSVL
JGI1027J12803_1046387201	3300000955	Soil	MKVLLAALALISAGSVAADCPKAADWARAFYAEHYSFYSDPSDRVLQFTTPEFGAL
JGI1027J12803_1050534391	3300000955	Soil	MKILLAGLTLISAASVAAECPKAADWARAFYSEHY
JGI24802J43972_10238822	3300002896	Soil	MKLLLTVLALISAGVAAADCPKAADWARAFYSEHYSFYADP
JGI25406J46586_102172272	3300003203	Tabebuia Heterophylla Rhizosphere	MKILWVALALISVGLAAADCPKPADWARSFYSEHYSFYADAPDPILQFTTPEFGALLKKEWAY
Ga0062595_1003439473	3300004479	Soil	MKVILAVLALISMDLAAADCPKAADWARAFYSEHYSFYANQSDDVL
Ga0062591_1011596763	3300004643	Soil	MKLILAVLALITAGSAAADCPKAADWARKFYSEHYSFYAEQSDSVLQLTTSEFGALLKRE
Ga0062594_1020088142	3300005093	Soil	MKPLLALLALISASPAAADCQKAADWARAFYSEHYSFYADAPDPILQLTTPEFGALLK
Ga0066678_107115711	3300005181	Soil	MKLLLTVLVLISAGPVAADCPKAADWARAFYSEHYSFYADPSDRVLQFTTPEFGA
Ga0066678_109035811	3300005181	Soil	MKLLLAVSALLSAGSAAADCPKAADWARAFYSEHYFFYAG
Ga0066671_100719281	3300005184	Soil	MKLLLAVLALVSAGAAAAADCPKAADCARTFYSEHYSFYADASDR
Ga0065715_111490032	3300005293	Miscanthus Rhizosphere	MKVILAVLALISMDLAAADCPKAADWARAFYSEHYSFYANQSDDVLQFATPEFGAL
Ga0066388_1031451491	3300005332	Tropical Forest Soil	MKLILAVLALISVGLAAADCPKAADWARAFYSDHYSFYAEPSDIILQFTTPEFGALLKREWAYSNG
Ga0066388_1060187592	3300005332	Tropical Forest Soil	MKLLLAVLALINAGPVAADCPKAADWARAFYSEHYSFYADPSDRVLQFTTPEF
Ga0066689_104170091	3300005447	Soil	MKLLLAVLALVSAGAAAAADCPKAADCARTFYSEHYSFYADASDRVLQ
Ga0066681_105604041	3300005451	Soil	MKLLLAVLALISLGSAAADCPKAADWARAFYSEHYSFYADPSDRVLQFTTPEFGALL
Ga0066695_101501061	3300005553	Soil	MKLLLAVLALVSAGAAAAADCPKAADCARTFYSEHYSFYADASDRVLQFTTPEFGA
Ga0066704_110378871	3300005557	Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYTDPSDRVLQFTTPEFGALLKRE
Ga0066703_108159062	3300005568	Soil	MKLFLAVLALISAGPVAADCRKAADWARAFYSEHY
Ga0066903_1014906232	3300005764	Tropical Forest Soil	MRLLLALLALISAGPAAADCPKAADWARAFYSEHYSFYAGAPDPILQFTTPEF*
Ga0066903_1025670153	3300005764	Tropical Forest Soil	MRLLLALLALISAGPVAADCPKAADWARAFYSEHYLFYGGAPDPILQFTTP
Ga0066903_1027484433	3300005764	Tropical Forest Soil	VIFPKQRMKLILAVLTLISVDLAAADCPKAADWAR
Ga0066903_1070725551	3300005764	Tropical Forest Soil	MKILLTVLALISVARVFADCPKAADWARAFYSDHYSFYADPSDGALQFATQEFGALLKREWAYS
Ga0066656_106738262	3300006034	Soil	MKLILAVLTLISAGLAAADCPKAADWARAFYSEHYSFY
Ga0070712_1018637561	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKLLLAVLALISAGPVAADCPKAAAWARAFYSEHYSFYADPSDRVLQFTT
Ga0066659_103132111	3300006797	Soil	MKLLLAVLALVSAGAAAAADCPKAADCARTFYSEHYSFYADASD
Ga0066659_109326392	3300006797	Soil	MKILLAVLALISAGSVAADCPKAADWARAFYSEHY
Ga0066660_104826591	3300006800	Soil	MKLLVTLLALISSGVAAADCPKAADWARAFYSEHYSFYADPSDRVLQFAK
Ga0066660_107008882	3300006800	Soil	MKLLLAVLALVSAGAAAAADCPKAADCARTFYSEHYSFYADASDRVLQFTTP
Ga0066710_1005252141	3300009012	Grasslands Soil	MKLLLAVLALVSAGAAAAADCPKAADCARTFYSEHYS
Ga0066710_1027041841	3300009012	Grasslands Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSF
Ga0126373_120652533	3300010048	Tropical Forest Soil	VIFPKQRMKLILAVLTLISVDLAAADCPKAADWARTFYS
Ga0099796_102111941	3300010159	Vadose Zone Soil	MKLFLAVLALISAGLAAADCPKAADWARSFYSEHYFFYAGAPDPI
Ga0099796_102784181	3300010159	Vadose Zone Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYAEPSDRVLQLSTPEFGALLKREWEYSNGEIGHLDY
Ga0134082_101116401	3300010303	Grasslands Soil	MKLLLAVLALISAGPAAADCPKAADWARAFYSEHYFFYAGAPDP
Ga0134064_104040362	3300010325	Grasslands Soil	MKLLLAVLALISAGPVGADCPRAADWARAFYSEHYSFYADPSDRVL
Ga0134063_100989203	3300010335	Grasslands Soil	MKLLLAVLALISAGPAAADCPKAADWARAFYSEHYSFYA
Ga0134066_100612191	3300010364	Grasslands Soil	MKLLLAVLALISAGPAAADCPKAADWARAFYSEHYS
Ga0134128_122473541	3300010373	Terrestrial Soil	MKVILAVLALISMDLAAADCPKAADWARAFYSEHYSFYANQSDDVLQFATPEF
Ga0134121_127173362	3300010401	Terrestrial Soil	MKLLFAVLALVSAGSVAADCPKAADWARAFYSEHYSFYADQSDSLLELTTSEFRALLKREWE
Ga0137364_111834431	3300012198	Vadose Zone Soil	MKLLLAVLALVSAGAAAAADCPKAADCARTFYSEHYSFYADASDRVLQFTTPEFGAL
Ga0137383_102895142	3300012199	Vadose Zone Soil	MKLLFAVLALVSAGSAAADCPKAADWARAFYSEHYSFYAD
Ga0137365_104365641	3300012201	Vadose Zone Soil	MKLLLAVLALIIAGPVAADCPKAADWARAFYSEHYSFYAGPSDRVLQLTTPEFGALLKREWEYSKGEIGH
Ga0137363_100425465	3300012202	Vadose Zone Soil	MKLLLAVLALISAGPAAADCPKAADWARAFYSEHYSFYAGAPDPIL
Ga0137363_114352902	3300012202	Vadose Zone Soil	MKLLLAVLALVSADAAAAADCPKAADCARTFYSEHHSFYADASDRVLQFTTPEFGALLKREWAYSQGEI
Ga0137362_100800241	3300012205	Vadose Zone Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYADPSDCVLQFTSPEFGALLKREWKY
Ga0137381_104016363	3300012207	Vadose Zone Soil	MKLLLAVLALISAGPAVADCPKAADWARAFYSEHYFFYAGAPDPILQFTTPEFGALL
Ga0137376_113069901	3300012208	Vadose Zone Soil	MMRMKLLLAVLALISAGSAAADCPKPADWARAFYSEHYFFYAGAPDPILQFTTPEFGALLKK
Ga0137379_101733825	3300012209	Vadose Zone Soil	MKLLLAVLALINASPAAADCPKAADWARAFYSEHYFFYAGAPDP
Ga0137377_103869832	3300012211	Vadose Zone Soil	MKLFLAVLALISAGPAAADCPSAADWARAFYSEHYFFYAGAPDPILQFTTPQFGALLKKE
Ga0137377_106885903	3300012211	Vadose Zone Soil	MKLLLAVLALVSAEAAAAADCPKAADWARTFYSQHYSFYADASDRVLQF
Ga0137370_106645192	3300012285	Vadose Zone Soil	MKLLLAVLALIIAGPVAADCPKAADWARAFYSEHYTFY
Ga0137372_102832191	3300012350	Vadose Zone Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYADPSDRV
Ga0137372_102991253	3300012350	Vadose Zone Soil	MKLLLSVLALISAGSAAADCPKAADWARAFYSEHYFFYAGAPDPILQFTTP
Ga0137372_103686141	3300012350	Vadose Zone Soil	MKLFLAVLALISAGPAVADCPKAADWARAFYSEHYFFYAGAPDPILQFTTPQFGALLKKEWAY
Ga0137372_105265771	3300012350	Vadose Zone Soil	MKLFLAVLALISAGPAAADCPNAADWARAFYSEHYFFYAGAPDPILQFTTPQFGALLKKEWAY
Ga0137386_107313681	3300012351	Vadose Zone Soil	MKLLLAVLALISAGPAAADCPKAADWARAFYSEHYSF
Ga0137386_110358232	3300012351	Vadose Zone Soil	MKLLLAVLALISAGPAAADCPKAADWARAFYSQHYFFYAGAPDPIFQF
Ga0137366_101224204	3300012354	Vadose Zone Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYAGPSDRVLQLTTP
Ga0137366_103299451	3300012354	Vadose Zone Soil	MKLFLAVLALISAGPAVADCPKAADWARAFYSEHYFFYAGAPDPILQFTTPQFGALLKKEWAYS
Ga0137371_105696362	3300012356	Vadose Zone Soil	MKLLLAVLALISAGRAAADCPKAADWARAFYSEHYSFYVGAPDPILQFTTPEFGALLKKEWAY
Ga0137384_105990671	3300012357	Vadose Zone Soil	MKLFLAVLALISAGPAVADCPKAADWARAFYSEHYFFYAGAPDPILQFTTPQFGAL
Ga0137384_112380561	3300012357	Vadose Zone Soil	MKLFLAVLALISAGPAAADCPNAADWARAFYSEHYFFYAGAPDPILQFTTPQFGALLKKE
Ga0137360_102676771	3300012361	Vadose Zone Soil	MKLLLAVLALISAGPVAADCPKPADWARAFYSEHYSFYADPSDRVLQFT
Ga0137361_101346811	3300012362	Vadose Zone Soil	MKLLLAVLALISAGPAAADCPKAADWTRAFYSEHYSFYAGAPDPILQFTTPEFGALLKKE
Ga0157303_102789192	3300012896	Soil	MKLLLAVLALISVGPVAADCPKAADWARAFYAEHYSFYADPSDRVLQLTTPEFGALLKREWEYSKGEIG
Ga0137419_114886001	3300012925	Vadose Zone Soil	MKLLLSVLALISAGSAAADCPKAADWARAFYSGHYSFYADPSDRVLQFTTSEFGA
Ga0137416_105291601	3300012927	Vadose Zone Soil	MKLHLAVLALISPGSVAADCPKAADWARAFYSEHYSF
Ga0137416_119089911	3300012927	Vadose Zone Soil	MKLLLVVVTVISAEVAAAADCPKAADWARAFYTEHYSFYADSSDRVLQLATPEFGAL
Ga0137404_100469531	3300012929	Vadose Zone Soil	MKLLLAVLALISAGPAAADCPKAADWARAFYSEHYSFYAGAPD
Ga0137404_103562281	3300012929	Vadose Zone Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYTDPSDRVLQFTTPEFGALLKREWQ
Ga0137407_107053631	3300012930	Vadose Zone Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYTDPSDRVLQFTTPEFGALLKREWQYSNGE
Ga0137410_110958631	3300012944	Vadose Zone Soil	MKLLLSVLALISAGSAAADCPKAADWARAFYSEHYSFY
Ga0137410_116923671	3300012944	Vadose Zone Soil	MKLLLAVLALLSAGSVAADCPKAADWARAFYSEHYSFYVGAPDPILQL
Ga0164304_117868791	3300012986	Soil	MKLLMAVLALISAGPVAADCPKAADWARTFYSEHYSFYADPSDRALQFTTPEFGAL
Ga0157307_10296971	3300013096	Soil	MKLLLAVLALISVGPVAADCPKAADWARAFYAEHYSFYADPSDRVLQ
Ga0157374_107210501	3300013296	Miscanthus Rhizosphere	MKVILAVLALISMDLAAADCPKAADWARAFYSEHYSFYANQSDDVLQFATPEFGTLLKRE
Ga0134078_104090721	3300014157	Grasslands Soil	LLLAVLALVSAEAAAAADCPKAADWARTFYSQHYSFYADASDRVLQFTTPEFGALLKR*
Ga0134079_106960742	3300014166	Grasslands Soil	MKLLLAILALVSAEAAAAADCPKAADWARTFYSQHYSFYADAS
Ga0137405_12014562	3300015053	Vadose Zone Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSQHYSFYTDPSDRVLQ
Ga0137412_101823012	3300015242	Vadose Zone Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSERYSFYAEPSDRVLQFTTPEF
Ga0134085_104106641	3300015359	Grasslands Soil	MKLLLAVLALISEGPTAADCPKAADWARAFYSEHYSFYAGAPDPILEFT
Ga0132258_135370843	3300015371	Arabidopsis Rhizosphere	MKVILAVLALISMDLAAADCPKAADWARAFYSEHYSFYANQSDDVLQFATP
Ga0132256_1036793992	3300015372	Arabidopsis Rhizosphere	MKLLFAVLALVSAGAVAANCPKAPDWARAFYSEHYSFYAHPSDLVLKLTT
Ga0132255_1012589622	3300015374	Arabidopsis Rhizosphere	MKVLLAVLALISGSLVAADCPKAADWARAFYSEHYSFYADQSDRVLELTTPEFGALLKREWEYSNGEIG
Ga0182035_121586631	3300016341	Soil	MKRLLAVLALISAGSVAADCPKPADWARAFYSEHYSFYAERSDPVLQLTTPEFGALLKRGMGIF
Ga0182032_114781801	3300016357	Soil	MKLLLAVLALLGAGPAAADCPKAADWARAFYSEHYFFYADAPDPILQFTTPEFGALLK
Ga0182040_104675291	3300016387	Soil	MKLILALLALISVGLAAADCPKAADWARAFYSEHYSFYAEPSDIILQF
Ga0134083_101031413	3300017659	Grasslands Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHY
Ga0184604_102117712	3300018000	Groundwater Sediment	MKLLLAVLALISADSVAADCPKAADWARTFYSEHYSFYADA
Ga0184604_102572562	3300018000	Groundwater Sediment	MKLFLAVLALISAGPAAADCPKAADWARAFYSEHYSFYADSSDRVLQFTTPEFGALLKREWKYS
Ga0184604_103588101	3300018000	Groundwater Sediment	MKLLLAVLALSSAGPVAADCPKAADWARAFYSEHYSFYADP
Ga0184618_102904552	3300018071	Groundwater Sediment	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYADPSDRVSQFTTPEFGALLKREWEYSN
Ga0193756_10486122	3300019866	Soil	MKLLLAVLALISASPVAADCPKAADWARAFYSEHYSFYVDPSDRVLQFTTPEFGA
Ga0193727_10060691	3300019886	Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYADPSDRVLQFTTPEFGAL
Ga0193727_10509451	3300019886	Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYADPS
Ga0193729_10014381	3300019887	Soil	MKLLLAVLALISAGPAAADFPKAADWARAFYSEHYFFYAGAPDP
Ga0193692_11261952	3300020000	Soil	MRTKLLFAVLALVSAGSVAADCPKAADWARAFYSEHYSFYADPSDRVLQFTTPEFGAL
Ga0193697_11291281	3300020005	Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYVDPSDRVLQFTTPEFG
Ga0193735_10570212	3300020006	Soil	MKLLLAVLALISAGLAAADCPKAADWDRAFYSEHYSFYAGEADPIL
Ga0193735_11553221	3300020006	Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYADRSDRVLQYTTPEFGALLKREWAYS
Ga0193735_11642572	3300020006	Soil	MKLLLAVLALISAGPAAADCPKPADWARAFYSEHYFFYAGAPDPI
Ga0193757_10258452	3300020008	Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYADQSDRVLKLTTSEFGAL
Ga0210382_100943832	3300021080	Groundwater Sediment	MKLLLAVLALISAGPAAADCPKAADWARAFYSEHYFFYAGAP
Ga0179596_105414532	3300021086	Vadose Zone Soil	MKLLLAVLALVSAEAAAAADCPKAADWARTFYSQHYSFYADASDRVLQFTTPEFGTV
Ga0193750_10781542	3300021413	Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYA
Ga0126371_124469401	3300021560	Tropical Forest Soil	VIFPKQRMKLILAVLTLISVDLAAADCPKAADWARTFYSEHYSFYAEPSDTILKFTTAE
Ga0224452_11966101	3300022534	Groundwater Sediment	MKLLLAVLALISAGPVAADCPKAADWVRAFYSEHYS
Ga0222623_101746071	3300022694	Groundwater Sediment	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYADPSDRVLQFTTPEFGALLKREWKYSNGE
Ga0222622_100883611	3300022756	Groundwater Sediment	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYADSSDR
Ga0222622_111334741	3300022756	Groundwater Sediment	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYADPSDRVLQFTTPEF
Ga0179591_10850406	3300024347	Vadose Zone Soil	MKLFLAVLALINASLAAADCPKAADWARSFYNLSL
Ga0209473_10797053	3300026330	Soil	MKLLLAVLALISAGPAAADCPKAADWARAFYSEHYFFYAGAPDPILQFTTPEFGALL
Ga0209808_11142423	3300026523	Soil	MKLLLAVLALISAGPAAADCPKAADWARAFYSEHYFF
Ga0209156_103450742	3300026547	Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFY
Ga0209161_101400231	3300026548	Soil	MKLLVTLLALISSGVAAADCPKAADWARAFYSEHYSFYADPSDRVLQFAT
Ga0209577_102819971	3300026552	Soil	MKILLAVLALISAGSVAADCPKAADWARAFYSEHYSFYADPSDRVLQFTTPEFGALLKREWAYSNGEIGHLD
Ga0179587_102350121	3300026557	Vadose Zone Soil	MKLFLAVLALINASLAAADCPKAADWARSFYTEHYFFYAGAPDPIL
Ga0179587_107778582	3300026557	Vadose Zone Soil	MKLLLAVLALVSAEAAAAADCPKAADWARTFYSQHYSFYADASDRVLQFTTPEF
Ga0209974_103022972	3300027876	Arabidopsis Thaliana Rhizosphere	MKLLLTVLALISAGPVAADCPKAADWARAFYSEHYSFYADPSDRVLQFTTPEFGALLKSEWAYSKGEIGHL
Ga0137415_104997681	3300028536	Vadose Zone Soil	MKLLLAVLALISPGSVAADCPKAADWARAFYSEHYSF
Ga0307302_102261431	3300028814	Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYADSSDRVLQFTTPEFGALLKREWEYSNGEIGH
Ga0307278_100473741	3300028878	Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYADPSDRVLQFTTPEFGALLKR
Ga0307308_105467702	3300028884	Soil	MKLLLAVLALISAGPAAADCPKAADWARAFYSEHYSFYAGAPDPILQFTTPEFGA
Ga0075384_111842432	3300030841	Soil	MKPLLAVLALISAGPAAADCPKAADWARAFYSEHYSFYVGAPDPILQ
Ga0075399_111564582	3300030967	Soil	MKLLLAVLALISAGPVAADCPKAADWARAFYSEHYSFYADPSDRVLKFTTSEFGALLKREWEYSNGEIGHLTQRRRLESL
Ga0170824_1127676512	3300031231	Forest Soil	MKLFLAVFALISAGPVAADCPKVADWARAFYSEHYSFYAEPSDHVLQF
Ga0170824_1268213041	3300031231	Forest Soil	MKLLFEVLALINAGLVAADCPKAADWARSFYTEHYFFYAGAPDPILQFTTPQFGALLKKEWAYSKG
Ga0306925_105320651	3300031890	Soil	MKLILALLALISVGLAAADCPKAADWARAFYSEHYFFY
Ga0306926_118251022	3300031954	Soil	MKRLLAVLALISAGSVAADCPKPADWARAFYSEHYSFYAERSDPVLQL
Ga0310911_103657152	3300032035	Soil	MKLILALLALISVGLAAADCPKAADWARAFYSEHYFFYAKAPDSILEFTTPEFGA
Ga0306920_1006217831	3300032261	Soil	MKLLLAVLALLGAGPAAADCPKAADWARAFYSEHYFFYADAPDPI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060186

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences