Metagenome / Metatranscriptome Family F060193

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060193
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	104 residues
Representative Sequence	MIALAFAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSKGK
Number of Associated Samples	121
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.09 %
% of genes near scaffold ends (potentially truncated)	26.32 %
% of genes from short scaffolds (< 2000 bps)	82.71 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.496 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (33.835 % of family members)
Environment Ontology (ENVO)	Unclassified (61.654 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.173 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 36.51% Coil/Unstructured: 63.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF13620	CarboxypepD_reg	13.53
PF13759	2OG-FeII_Oxy_5	7.52
PF01977	UbiD	3.76
PF01979	Amidohydro_1	1.50
PF00072	Response_reg	0.75
PF00294	PfkB	0.75
PF07721	TPR_4	0.75
PF08240	ADH_N	0.75
PF01878	EVE	0.75
PF05635	23S_rRNA_IVP	0.75
PF01609	DDE_Tnp_1	0.75
PF02787	CPSase_L_D3	0.75
PF04138	GtrA	0.75
PF00005	ABC_tran	0.75
PF00578	AhpC-TSA	0.75
PF02780	Transketolase_C	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	3.76
COG1673	Predicted RNA-binding protein, contains PUA-like EVE domain	General function prediction only [R]	0.75
COG2947	Predicted RNA-binding protein, contains EVE domain	General function prediction only [R]	0.75
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.75
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.75
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.75
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.75
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.75
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.50 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.50 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.50 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %
Unclassified	root	N/A	1.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.75 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	63.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %
Unclassified	root	N/A	1.50 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %
Unclassified	root	N/A	1.50 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %
Unclassified	root	N/A	1.50 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.75 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %
Unclassified	root	N/A	1.50 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.75 %
Candidatus Parcubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %
Unclassified	root	N/A	1.50 %
unclassified Parcubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria	0.75 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	63.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.50 %
Unclassified	root	N/A	1.50 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.75 %
Parcubacteria bacterium SCGC AAA011-J21	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Parcubacteria bacterium SCGC AAA011-J21	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105507413	All Organisms → cellular organisms → Bacteria → Acidobacteria	1919	Open in IMG/M
3300002558\|JGI25385J37094_10049757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1407	Open in IMG/M
3300002562\|JGI25382J37095_10006665	All Organisms → cellular organisms → Bacteria → Proteobacteria	4162	Open in IMG/M
3300002912\|JGI25386J43895_10004580	All Organisms → cellular organisms → Bacteria → Proteobacteria	3733	Open in IMG/M
3300004114\|Ga0062593_102436967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300005166\|Ga0066674_10008193	All Organisms → cellular organisms → Bacteria	4232	Open in IMG/M
3300005166\|Ga0066674_10053080	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300005167\|Ga0066672_10381082	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300005172\|Ga0066683_10273495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300005175\|Ga0066673_10724553	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Parcubacteria bacterium SCGC AAA011-J21	572	Open in IMG/M
3300005177\|Ga0066690_10534344	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300005178\|Ga0066688_10242055	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300005180\|Ga0066685_10463321	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300005186\|Ga0066676_10371879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300005187\|Ga0066675_10157375	All Organisms → cellular organisms → Bacteria → Acidobacteria	1564	Open in IMG/M
3300005332\|Ga0066388_101635513	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300005446\|Ga0066686_10447352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	882	Open in IMG/M
3300005447\|Ga0066689_11026767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300005450\|Ga0066682_10180253	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300005450\|Ga0066682_10207224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1257	Open in IMG/M
3300005451\|Ga0066681_10026028	All Organisms → cellular organisms → Bacteria	3047	Open in IMG/M
3300005552\|Ga0066701_10035130	All Organisms → cellular organisms → Bacteria	2644	Open in IMG/M
3300005553\|Ga0066695_10099205	All Organisms → cellular organisms → Bacteria → Acidobacteria	1784	Open in IMG/M
3300005553\|Ga0066695_10161761	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300005555\|Ga0066692_10032868	All Organisms → cellular organisms → Bacteria	2764	Open in IMG/M
3300005557\|Ga0066704_10032333	All Organisms → cellular organisms → Bacteria	3201	Open in IMG/M
3300005558\|Ga0066698_10102157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1893	Open in IMG/M
3300005559\|Ga0066700_11175846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300005561\|Ga0066699_10626686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300005568\|Ga0066703_10700506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300005569\|Ga0066705_10319565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300005576\|Ga0066708_10149501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1434	Open in IMG/M
3300005598\|Ga0066706_10724144	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300005598\|Ga0066706_11006897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300005713\|Ga0066905_101438782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300006034\|Ga0066656_10248865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1142	Open in IMG/M
3300006046\|Ga0066652_101638440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300006175\|Ga0070712_101554728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300006791\|Ga0066653_10015014	All Organisms → cellular organisms → Bacteria	2792	Open in IMG/M
3300006797\|Ga0066659_10201719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1456	Open in IMG/M
3300006797\|Ga0066659_11283041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300006852\|Ga0075433_10210964	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300006881\|Ga0068865_102214346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300009012\|Ga0066710_100087654	All Organisms → cellular organisms → Bacteria → Acidobacteria	4097	Open in IMG/M
3300009012\|Ga0066710_100311584	All Organisms → cellular organisms → Bacteria → Acidobacteria	2310	Open in IMG/M
3300009012\|Ga0066710_103728366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300009089\|Ga0099828_10397726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1242	Open in IMG/M
3300009090\|Ga0099827_10752560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300009100\|Ga0075418_11247370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300009137\|Ga0066709_100494282	All Organisms → cellular organisms → Bacteria → Acidobacteria	1721	Open in IMG/M
3300009147\|Ga0114129_12951058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300009148\|Ga0105243_12339017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300009156\|Ga0111538_11008941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1053	Open in IMG/M
3300009162\|Ga0075423_12136098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300009176\|Ga0105242_10233376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1650	Open in IMG/M
3300010154\|Ga0127503_10220734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300010301\|Ga0134070_10142747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300010304\|Ga0134088_10012019	All Organisms → cellular organisms → Bacteria	3720	Open in IMG/M
3300010320\|Ga0134109_10124356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	913	Open in IMG/M
3300010322\|Ga0134084_10030673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1502	Open in IMG/M
3300010323\|Ga0134086_10013062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	2583	Open in IMG/M
3300010335\|Ga0134063_10147503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1089	Open in IMG/M
3300010336\|Ga0134071_10203786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	976	Open in IMG/M
3300010337\|Ga0134062_10016783	All Organisms → cellular organisms → Bacteria → Acidobacteria	2756	Open in IMG/M
3300010360\|Ga0126372_11118389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300010361\|Ga0126378_11732319	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300010398\|Ga0126383_11137119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300011271\|Ga0137393_10534628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1006	Open in IMG/M
3300012198\|Ga0137364_10490315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300012199\|Ga0137383_10199258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1467	Open in IMG/M
3300012202\|Ga0137363_10852613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300012203\|Ga0137399_10699852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300012206\|Ga0137380_10372480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1271	Open in IMG/M
3300012207\|Ga0137381_10224399	All Organisms → cellular organisms → Bacteria → Acidobacteria	1630	Open in IMG/M
3300012208\|Ga0137376_11372094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300012212\|Ga0150985_104200201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1358	Open in IMG/M
3300012212\|Ga0150985_112512159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300012285\|Ga0137370_10711642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300012349\|Ga0137387_10002906	All Organisms → cellular organisms → Bacteria	9006	Open in IMG/M
3300012361\|Ga0137360_11105483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300012373\|Ga0134042_1158610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300012396\|Ga0134057_1116077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300012399\|Ga0134061_1058278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300012402\|Ga0134059_1086337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300012403\|Ga0134049_1161430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300012406\|Ga0134053_1044084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300012410\|Ga0134060_1374748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300012918\|Ga0137396_10795996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300012922\|Ga0137394_10001041	All Organisms → cellular organisms → Bacteria	19976	Open in IMG/M
3300012971\|Ga0126369_11056027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300012976\|Ga0134076_10018795	All Organisms → cellular organisms → Bacteria	2435	Open in IMG/M
3300012977\|Ga0134087_10102830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1199	Open in IMG/M
3300013297\|Ga0157378_11972291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300014150\|Ga0134081_10420538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300014154\|Ga0134075_10019238	All Organisms → cellular organisms → Bacteria	2703	Open in IMG/M
3300015358\|Ga0134089_10039854	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300015358\|Ga0134089_10217831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300015371\|Ga0132258_11986878	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300015371\|Ga0132258_13269895	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300015373\|Ga0132257_100737639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1226	Open in IMG/M
3300015374\|Ga0132255_100473636	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300017656\|Ga0134112_10130923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300017659\|Ga0134083_10022287	All Organisms → cellular organisms → Bacteria	2246	Open in IMG/M
3300017659\|Ga0134083_10055730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1497	Open in IMG/M
3300018072\|Ga0184635_10126121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300018431\|Ga0066655_10119441	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300018431\|Ga0066655_10135244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1440	Open in IMG/M
3300018433\|Ga0066667_10211943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1434	Open in IMG/M
3300018468\|Ga0066662_10321870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1313	Open in IMG/M
3300018476\|Ga0190274_11049648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300018482\|Ga0066669_10194308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1546	Open in IMG/M
3300019257\|Ga0180115_1455619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300026298\|Ga0209236_1014426	All Organisms → cellular organisms → Bacteria	4565	Open in IMG/M
3300026307\|Ga0209469_1038744	All Organisms → cellular organisms → Bacteria → Acidobacteria	1555	Open in IMG/M
3300026313\|Ga0209761_1098558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1467	Open in IMG/M
3300026323\|Ga0209472_1114833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300026324\|Ga0209470_1059295	All Organisms → cellular organisms → Bacteria → Acidobacteria	1815	Open in IMG/M
3300026325\|Ga0209152_10422733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300026326\|Ga0209801_1067872	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300026327\|Ga0209266_1042698	All Organisms → cellular organisms → Bacteria → Acidobacteria	2297	Open in IMG/M
3300026328\|Ga0209802_1151981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	974	Open in IMG/M
3300026329\|Ga0209375_1194924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300026334\|Ga0209377_1046693	All Organisms → cellular organisms → Bacteria → Acidobacteria	1959	Open in IMG/M
3300026528\|Ga0209378_1047544	All Organisms → cellular organisms → Bacteria → Acidobacteria	2107	Open in IMG/M
3300026540\|Ga0209376_1170208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300026552\|Ga0209577_10597439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300027903\|Ga0209488_10316602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1164	Open in IMG/M
3300031446\|Ga0170820_15558818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300031716\|Ga0310813_10363307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1237	Open in IMG/M
3300031820\|Ga0307473_10483712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300032205\|Ga0307472_100566462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.22%
Host-Associated	Host-Associated	12.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.96%
Plants	Host-Associated → Plants	12.78%
Aquatic	Environmental → Aquatic	2.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.02%
Freshwater	Environmental → Aquatic → Freshwater	1.50%
Sediment	Environmental → Aquatic → Sediment	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.51%
Loam	Environmental → Terrestrial → Soil → Loam	3.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.50%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.75%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	44.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.51%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	33.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	18.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.01%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.50%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.50%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.75%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1055074134	3300000364	Soil	MCFASPAAADIVSGSVLGADQKPIVNGTFTAKDAKGGTTTFKTDNVGNFSVYLDPGKFTVTSSADASLTGVIESLPQPRQQDVHLTKK*
JGI25385J37094_100497572	3300002558	Grasslands Soil	MLHTHRLPRPKRITLAMIALAFAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYAVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
JGI25382J37095_100066652	3300002562	Grasslands Soil	MLHTHRLPRPKRITLSMIALAFAGAIWFSLPASADIVSGRVLGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
JGI25386J43895_100045802	3300002912	Grasslands Soil	MLHTHRLPRPKRITLAMIALAFAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYXVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
Ga0062593_1024369672	3300004114	Soil	MRITFIAVFVTILIGGFSQPAAADIVSGRILGVDAKPIVNGTFTARDSKGGTTTFKSDKEGNFSVYLDPGKFTVNSSADASLTGVIESLPQPRQQDVRLTKK*
Ga0063356_1020458192	3300004463	Arabidopsis Thaliana Rhizosphere	PAAADIVSGRILGVDAKPIVNGTFTARDSKGGTTTFKSDKEGNFSVYLDPGKFTVNSSADASLTGVIESLPQPRQQDVRLTKK*
Ga0066674_100081935	3300005166	Soil	MSHTHRLPRLKRITWAMIALAIAGSIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESITFKTDKSGNFSVYLDPGKYTVSPSADASLTGVIESFPQPRQQDVRLSKGK*
Ga0066674_100530803	3300005166	Soil	MIALAIAGAIWFSLPASADIVSGRVLGVDEKPIVNGTFTARNSKGESTPFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0066672_103810822	3300005167	Soil	MLRRIWIILCLAIAGAIWFSLPASADIVSGRILGADEKPIVNGTFTARNAKGEPTTFKTDKSGNFSVYLDPGKYTVSPSTDAALTGVIESFPQPRQQD
Ga0066683_102734951	3300005172	Soil	MLRRIWIILCLAIAGAIWFSLPASADIVSGRILGADEKPIVNGTFTARNAKGEPTTFKTDKSGNFRVYLDPGKYTVSPSTDAALTGVIESFPQPRQQDVHLTRGK*
Ga0066673_107245531	3300005175	Soil	MLHTHRLPRPKRITWAMIALAIAGAIWFSLPASADIVSGRVLGVDEKPIVNGTFTARNSKGESTPFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQ
Ga0066690_105343442	3300005177	Soil	MQRTHIPPRIRPITWTTLCLAIAGAIWFALPASADIVSGHVLGPDEKPIVNGTFTARNSKGETTTFKTDKSGNFSVYLDPGKFTISSSTDASLTGVIESFPQPRQQDVHLAKGK*
Ga0066688_102420551	3300005178	Soil	MLRRIWIILCLAIAGAIWFSLPASADIVSGRILGADEKPIVNGTFTARNAKGEPTTFKTDKSGNFSVYLDPGKYTVSPSTDAALTGVIESFPQPRQQDVHLTRGK*
Ga0066685_104633212	3300005180	Soil	MLRRIWIILCLAIAGAIWFSLPASADIVSGRILGADEKPIVNGTFTARNAKGEPTTFKTDKSGNFSVYLDPGKYTVSPSTDAALTGVIESFPQPRQQDVRLTRGK*
Ga0066676_103718792	3300005186	Soil	MLHTHRLPRPKRITLAMIALAFAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
Ga0066675_101573751	3300005187	Soil	MLHTHRLPRPKRITLAMIALAIAGTIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
Ga0066388_1016355132	3300005332	Tropical Forest Soil	MRRIFRNLCLAIGVLILLPLAASADIVSGRILGADEKPIVSGTFTAKDTKGQATTFKSDPKGNFSVYLDPGKFTVSSSADPSLSGTIESFPQPRQQDVHLTKK*
Ga0066686_104473522	3300005446	Soil	MLRRNLAILCLAIAGPIWFSFTAFADIVSGRILGADEKPMVNGTFTARNAKGEATTFKTDKSGNFSVYLDPGKYTVNPSADAALTGVIESFPQPRQQDVHLTRRK*
Ga0066689_110267672	3300005447	Soil	MQRTHIPPRIRPITWTTLCLAIAGAIWFALPASADIVSGHVLGPDEKPIVNGTFAARNSKGETTTFKTDKSGNFSVYLDPGKFTVSSSTDAALTGVIESFP
Ga0066682_101802533	3300005450	Soil	MLRRIWIILCLAIAGAIWFSLPASADIVSGRILGADEKPIVNGTFTARNAKGEPTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0066682_102072242	3300005450	Soil	MIALAIAGSIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESITFKTDKSGNFSVYLDPGKYTVSPSADASLTGVIESFPQPRQQDVRLSKGK*
Ga0066681_100260282	3300005451	Soil	MLHTHRLPRPKRITLAMIALAIAGTIWFSLPASADIVSGRVLGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
Ga0066701_100351302	3300005552	Soil	MLHTHRLPRPKRITLSMIALAFAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
Ga0066695_100992053	3300005553	Soil	MLHTHRLPRPKRITLAMIALAFAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYAVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0066695_101617612	3300005553	Soil	MLHTHRLPRPKRITWAMIALAIAGAIWFSLPASADIVSGRVLGVDEKPIVNGTFTARNSKGESTPFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0066692_100328682	3300005555	Soil	MLHTHRLPRPKRITLSMIALAFAGAIWFSLPASADIVSGRVLGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0066704_100323333	3300005557	Soil	AIAGTIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
Ga0066698_101021573	3300005558	Soil	LLVSSPQQRKIRGMRITSIAVFLAIVVAIGFPGPAAADIVSGRILGADEKPIVNGTFTARDSKGETTTFKSDKTGNFSVYLDPGKFTISSTADATLTGVIESFPQPRQQDVHLTKK*
Ga0066700_111758461	3300005559	Soil	EPDRSIFMQRTHIPPRIRPITWTTLCLAIAGAIWFALPASADIVSGHVLGPDEKPIVNGTFTARNSKGETTTFKTDKSGNFSVYLDPGKFTVSSSTDAALTGVIESFPQPRQQDVHLTKGK*
Ga0066699_106266862	3300005561	Soil	MLRRIWTILCLAIAGAIFSLPAWADIVSGRILGADEKPIVNGTFTAKGAKGEPTTFKTDKSGNFSVYLDPGKYTVSPSTDAALTGVIESFPQPRQQDVHLTRGK*
Ga0066703_107005062	3300005568	Soil	MLRRIWIILCLAIAAAIWFSLPASADIVSGRILGADEKPIVNGTFTARNAKGEPTTFKTDKSGNFSVYLDPGKYTVSPSTDAALTGVIESFPQPRQQDVHLTRGK*
Ga0066705_103195652	3300005569	Soil	MLHTHRLPRPKRITLAMIALAFAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0066708_101495012	3300005576	Soil	MLHTHGLPRPKRITLAMIALAIAGTIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
Ga0066706_107241442	3300005598	Soil	MFRNLCLALAFAILLPLAASADIVSGQILGADEKPIVNGTFTAKDAKGQATTFKSDPKGNFSVYLDPGKFTVSSSADPSLSGTIESFPQPRQQDVHLKK*
Ga0066706_110068972	3300005598	Soil	IFRIVLCFAIALTIGCPTAALADIVSGHILGPDQKPIVNGAFTAKDSKSAATTFKTDKDGNFSVYLDPGKFTISSNTDPTLTGIIESFPQPRQQDVHLTKK*
Ga0066905_1014387821	3300005713	Tropical Forest Soil	MLHTHRLPRLKRITGAMIALAIAGSIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSADASLTGVIESFPQPRQQDVRLSKGK*
Ga0066656_102488652	3300006034	Soil	MRITSIAVFLAIVVAIGFPGPAAADIVSGRILGADEKPIVNGTFTARDSKGETTTFKSDKTGNFSVYLDPGKFTISSTADTTLTGVIESFPQPRQQDVHLTKK*
Ga0066652_1016384401	3300006046	Soil	RIMLHTHRLPRPKRITLAMIALAIAGTIWFSLPASADIVSGRVLGADEKPILNGAFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0070712_1015547282	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LPLAAAADIVSGRILGADEKPIVNGTFTAKDAKGEATTFKSDPKGNFSVYLDPGKFTVSSSADSSLSGTIESFPQPRQQDVHLTKR*
Ga0066653_100150145	3300006791	Soil	MLHTHRLPRPKRITLAMIALAFAGAIWFSLPASADIVSGRVLGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYAVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0066659_102017191	3300006797	Soil	KRTTWIMLCLTIAGTIWFSIPASADIVSGRILGMDDKPIVNGTFTARNSKGETTTFKSDKSGNFSVYLDPGKFTVSSSTDAALTGVIESFPQPRQQDVHLTKGK*
Ga0066659_112830411	3300006797	Soil	TVMTSMFRNLCLALAFAILLPLAASADIVSGRILDADEKPIVNGTFTAKDAKGQATTFKSDPKGNFSVYLDPGKHTVTSIADPSLSGTIESFPQPRQQDVHLKK*
Ga0075433_102109642	3300006852	Populus Rhizosphere	MITVILAAVVAMCFASPAAADIVSGSVLGADQKPIVNGTFTAKDAKGGTTTFKTDNVGNFSVYLDPGKFTVTSSADATLTGVIESLPQPRQQDVHLTKK*
Ga0068865_1022143462	3300006881	Miscanthus Rhizosphere	MRITSIVLFLATIVAIGLPQSAFADIVSGRVLGADEKPIINGTFTAKDSKGETTTFKSDKTGNFSVYLDPGKFTVASSSDVSLTGVIESFPQPRQQDVHLTKK*
Ga0066710_1000876543	3300009012	Grasslands Soil	MRITSIAVFLAIVIAIGFPRPAAADIVSGRIIGADEKPIVNGTFTARDSKGETTTFKSDKTGNFSVYLDPGKFTISSTADATLTGVIESFPQPRQQDVHLTKK
Ga0066710_1003115843	3300009012	Grasslands Soil	MLRRIWIILCLAIAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNAKGEPTTFKTDKSGNFSVYLDPGKYTVSPSTDAALTGVIESFPQPRQQDVHLTRGK
Ga0066710_1037283662	3300009012	Grasslands Soil	MLRKIWAILCLAIAGSIWFSLPAFADIVSGRILGADEKPIVNGTFTAKNAKGEATTFKTDKSGNFSVYLDPGKYTVSPSTDAALTGVIESFPQPRQQDVRLTRGK
Ga0099828_103977261	3300009089	Vadose Zone Soil	TLCLAIAGAIWCSVPASADIVSGHILGPDEKPLVNGTFTAKSSKGEATPFKTDKSGNFSVYLDPGKYTVSSGADATLTGVIESFPQPRQQDVHLAKGK*
Ga0099827_107525601	3300009090	Vadose Zone Soil	MKRTWITLCLAIAGAIWFAVPASADIVSGHILGPDEKPIVNGTFTAKSSKGEATPFKTDKSGNFSVYLDPGKYTVSSGADATLTGVIESFPQPRQQDVHLAKGK*
Ga0075418_112473702	3300009100	Populus Rhizosphere	MRITFIAVFVTILLGGFSKPAAADIVSGRILGVDAKPIVNGTFTARDSKGGTTTFKSDKEGNFSVYLDPGKFTVSSSADASLTGAIESLPQPRQQDVRLTKK*
Ga0066709_1004942822	3300009137	Grasslands Soil	MGVHSFERIKRTTWIILCLAIAGAIWFSPPAFADIVSGRVLGLDEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSSSTDAALTGVIESFPQPRQQDVHLTKRK*
Ga0114129_129510582	3300009147	Populus Rhizosphere	MRITLIAVILAAVVAIYFAPPAVADIVSGRVLGADEKPVVNGTFTAKDAKGGTTTFKSDNAGNFSVYLDPGKFTVTLNADATLTGVIESLPQPRQQDVHLTKK*
Ga0105243_123390171	3300009148	Miscanthus Rhizosphere	MQRTLTLLWLAIVIALSLSRSASADIVSGRVYGLDEKPMATHTLTARDSKGEATTFKTDKAGNFSVYLDPGKFTVSSGADATLTGVIESFPQSRQKDIHMTKVTGK*
Ga0111538_110089411	3300009156	Populus Rhizosphere	CAMRITSIVLFLATIAAIGFPRSASADIVSGRVLGVDQKPIINGTFTARDAKGETTTFKSDKTGNFSVYLDPGKFTVASSSDASITGVIESFPQPRQQDVHLTKK*
Ga0075423_121360981	3300009162	Populus Rhizosphere	MIALAIAGSIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVRLSKGK*
Ga0105242_102333762	3300009176	Miscanthus Rhizosphere	MRITSIVLFLATIVAVSLPQSAFADIVSGRVLGADEKPIINGTFTAKDSKGETTTFKSDKTGNFSVYLDPGKFTVVSSSDVSLTGVIESFPQPRQQDVHLTKK*
Ga0127503_102207341	3300010154	Soil	AIGFLILLPLAAAADIVSGRILGADEKPIVNGTFTAKDAKGEATTFKSDPKGNFSVYLDPGKFTVSSSADSSLSGTIESFPQPRQQDVHLTKR*
Ga0134070_101427472	3300010301	Grasslands Soil	MIALAFAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYAVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
Ga0134088_100120195	3300010304	Grasslands Soil	MLRRNLAILCLAIAGPIWFSFTAFADIVSGRILGADEKPMVNGTFTARNAKGEATTFKTDKSGNFRVYLDPGKYPVNPSADAALTGVIESFPQPRQQDVHLTRGK*
Ga0134109_101243562	3300010320	Grasslands Soil	TLAMIALAIAGTIWFSLPASADIVSGRILGADEKPILNGTFSARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
Ga0134084_100306731	3300010322	Grasslands Soil	MIALAIAGSIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
Ga0134086_100130622	3300010323	Grasslands Soil	MIALAIAGSIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESITFKTDKSGNFSVYLDPGKYTVSPSADASLTGVIESFPQPRQQDVHLSKGK*
Ga0134063_101475032	3300010335	Grasslands Soil	AIAGTIWFSLPASADIVSGRVLGADEKPILNGAFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
Ga0134071_102037862	3300010336	Grasslands Soil	MIALAIAGSIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESITFKTDKSGNFSVYLDPRKYTVSPSADASLTGVIESFPQPSQQDVRLSKGK*
Ga0134062_100167833	3300010337	Grasslands Soil	MIALAFAGAIWFSLPASADIVSGRVLGADEKPILNGAFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
Ga0126372_111183892	3300010360	Tropical Forest Soil	KIRNMGRIFRNLCLAIGFLILLPLAMLADIVSGRVLGADEKPIVNGTFTAKDAKGQATTFKSDPKGNFSVYLDPGKFTVSSGADPSLSGTIESFPQPRQQDVHLTKK*
Ga0126378_117323193	3300010361	Tropical Forest Soil	MGSIFRNLCLGIALSILFPLAAAADIVSGRILGADEKPIVNGTFTAKDAKGQTTTFKSDPKGNFSVYLDPGKVTVSSSADPSLSGTIESFPQPRQQDVHLTKK*
Ga0126383_111371192	3300010398	Tropical Forest Soil	MRCIFRNLCLAIGVLILLPLAASADIVSGRILGADEKPIVSGTFTAKDAKGQATTFKSDPKGNFSVYLDPGKFTVSSSADPSLSGTIESFPQPRQQDVHLTKK*
Ga0137393_105346282	3300011271	Vadose Zone Soil	YEVFMKRTWITLCLAIAGAIWFAVPASADIVSGHILGPDEKPIVNGTFTAKSSKGEATPFKTDKSGNFSVYLDPGKYMVSSGADATLTGVIESFPQARQQDVHLTKGK*
Ga0137364_104903152	3300012198	Vadose Zone Soil	MIALAFAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
Ga0137383_101992581	3300012199	Vadose Zone Soil	MIALAFAGAIWFALPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0137363_108526132	3300012202	Vadose Zone Soil	MQRTNIFRIVLCFAIALTIGCPTAALADIVSGHMFGPDQKPIVNGTFTAKDSKNEATTFKSDKDGNFSVYLDPGKFTISSNTDPTLTGIIESFPQPRQQDVHLTKK*
Ga0137399_106998521	3300012203	Vadose Zone Soil	PPASADIVSGRILGADEKPIVNGTFTAKSSKGETTTFKSDKSGNFSVYLDPGKFTVSSTTDAALTGVIESFPQPRQQDVHLTKGK*
Ga0137380_103724802	3300012206	Vadose Zone Soil	GAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYAVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0137381_102243993	3300012207	Vadose Zone Soil	MIALAFAGAIWFSLPASADIVSGRILGADEKPILNGTFSARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0137376_113720941	3300012208	Vadose Zone Soil	GAIWFSLPASADIVSGRVLGVDEKPIVNGTFTARNSKGESTPFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0150985_1042002013	3300012212	Avena Fatua Rhizosphere	IPAIASADIVSGRIFGLDEKPIANATFTAKDAKGGSTAIKTNAMGNFSVYLDPGKFTISYSADPTLTGVIESFPQPRQQDVHLKKSDGK*
Ga0150985_1125121591	3300012212	Avena Fatua Rhizosphere	LLLAGVLGIVLPLTAAADIVSGRILGADEKPIVNGTFIAKDAKGQATTFKTDQKGNFSVYLDPGKFTVSSSADPSLSGTIESFPQPRQQDVHLKK*
Ga0137370_107116422	3300012285	Vadose Zone Soil	CLALAFAILLPLAASADIVSGRILGADEKPVVNGTFTAKDAKGQSTTFKSDQTGNFSVYLDPGKHTVSSSADPSLSGTIESFPQPRQQDVHLKK*
Ga0137387_100029063	3300012349	Vadose Zone Soil	MIALAFAGAIWFALPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
Ga0137360_111054831	3300012361	Vadose Zone Soil	MRTHIFLRIKRTTWTILCLAIAGALWLALPASADIVSGRILGVDEKPIVNGTFTARNSKGEATTFKSDKSGNFSVYLDPGKFTVSSSTDAGLTGIIESFPQPRQQDVHLTKGK*
Ga0134042_11586102	3300012373	Grasslands Soil	MIALAFAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYAVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0134057_11160772	3300012396	Grasslands Soil	MIALAIAGTIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0134061_10582781	3300012399	Grasslands Soil	NLAILCLAIAGPIWFSFTAFADIVSGRILGADEKPMVNGTFTARNAKGEATTFKTEKSGNFSVYLDPGKYTVNPSADAALTGVIESFPQPRQQDVHLTRRK*
Ga0134059_10863372	3300012402	Grasslands Soil	MIALAIAGSIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESITFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0134049_11614302	3300012403	Grasslands Soil	FSLPASADIVSGRVLGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYAVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0134053_10440841	3300012406	Grasslands Soil	LRRNLAILCLAIAGPIWFSFTAFADIVSGRILGADEKPMVNGTFTARNAKGEATTFKTDKSGNFSVYLDPGKYTVNPSADAALTGVIESFPQPRQQDVRLSKGK*
Ga0134060_13747482	3300012410	Grasslands Soil	MIALAFAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSKGK*
Ga0137396_107959962	3300012918	Vadose Zone Soil	MRHTHIFRGIKRTTWTTLCLAIACAIWFAPPASADIVSGRILGADEKPIVNGTFTAKSSKGETTTFKSDKSGNFSVYLDPGKFTVSSSTDAGLTGVIESFPQPRQQDVHLTKGK*
Ga0137394_100010414	3300012922	Vadose Zone Soil	MRRAHIFPRIKRTTWTVLCLAIAGAIWFSLPASADIVSGHILGPDEKPMVNGTFSAKNSKGEATAFKTDKSGNFSVYLDPGKFTVSSTTDAALTGVIESFPQPRQQDVHLTKGK*
Ga0126369_110560272	3300012971	Tropical Forest Soil	KILNMQRIFRNLCLAIGFLVLLPLAAAADIVSGRILGADQKPIVSGTFTAKDAKGQATTFKSDPKGNFTVYLDPGKFTVSSSADPSLTGTIESFPQPRQQDVHLTKK*
Ga0134076_100187951	3300012976	Grasslands Soil	MLRRNLAILCLAIAGPIWFSFTAFADIVSGRILGADEKPMVNGTFTARNAKGEATTFKTDKSGNFSVYLDPGKYTVNPSADAALTGVIES
Ga0134087_101028302	3300012977	Grasslands Soil	MIALAIAGSIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESITFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK*
Ga0157378_119722911	3300013297	Miscanthus Rhizosphere	MRITSIVLFLATIVAISLPQSAFADIVSGRVLGADEKPIINGTFTAKDSKGETTTFKSDKTGNFSVYLDPGKFTVVSSSDVSLTGAIESFPQPRQQDVHLTKK*
Ga0134081_104205381	3300014150	Grasslands Soil	MIALAIAGTIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESITFKTDKSGNFSVYLDPGKYTVSPSADASLTGVIESFPQPRQQDVRLS
Ga0134075_100192382	3300014154	Grasslands Soil	MLRRNLAILCLAIAGSIWFSFPVFADIVSGRILGADEKPMVNGTFTARNAKGEATTFKTDKSGNFSVYLDPGKYTVNPSADAALTGVIESFPQPRQQDVHLTRGK*
Ga0134089_100398541	3300015358	Grasslands Soil	PIWFSFTAFADIVSGRILGADEKPMVNGTFTARNAKGEATTFKTDKSGNFSVYLDPGKYTVNPSADAALTGVIESFPQPRQQDVHLTRRK*
Ga0134089_102178311	3300015358	Grasslands Soil	MIALAIAGSIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSADASLTGVIESFPQPRQQDVRLSKGK*
Ga0132258_119868782	3300015371	Arabidopsis Rhizosphere	MTAVILAAVVAMSFASTAAADIVSGRVLGADQKPIVNGTFTAKDAKGGATTFKSDNVGNFSVYLDPGKFTVTSSADATLTGVIESLPQPRQQDVHLTKK*
Ga0132258_132698952	3300015371	Arabidopsis Rhizosphere	MQYLNISRISLGFVLALVLTFPISALADIVSGHVFGPDQKPIVNGTFMANDSKGGTTTFKTDKDGNFSVYLDPGKFTISSGTDATLTGVIESFPQPRQQDVHLTKK*
Ga0132256_1037934002	3300015372	Arabidopsis Rhizosphere	ADIVSGRVLGADQKPIVNGTFTAKDAKGGTITFKSDNAGNFSVYLDPGKFTVTSSADAALTGVIESSPQPRQMDVHLTKK*
Ga0132257_1007376392	3300015373	Arabidopsis Rhizosphere	SLMGTTRIAVILAAVAVMCFASTAAADIVSGRILGADEKPIVNGTFTARPAKGEPTTFKSDATGNFSVYLDPGKFTVASASDATLTGVIESLPQPRQQDVHLAKK*
Ga0132255_1004736362	3300015374	Arabidopsis Rhizosphere	MIAVILAAVVAMSFASPAAADIVSGSVLGADQKPIVNGTFTAKDAKGGTTTFKTDNVGNFSVYLDPGKFTVTSSADATLTGVIESLPQPRQQDVHLTKK*
Ga0134112_101309232	3300017656	Grasslands Soil	MLRRNLAILCLAIAGPIWFSFTAFADIVSGRILGADEKPMVNGTFTARNAKGEATTFKTDKSGNFSVYLDPGKYTVNPSADAALTGVIESFPQPRQQDVHLTRRK
Ga0134083_100222872	3300017659	Grasslands Soil	MLHTHRLPRPKRITLSMIALAFAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK
Ga0134083_100557302	3300017659	Grasslands Soil	MLRRNLAILCLAIAGPIWFSFTAFADIVSGRILGADEKPMVNGTFTARNAKGEATTFKTDKSGNFSVYLDPGKYTVNPSADAALTGVIESFPQPRQQDVHLTRGK
Ga0184635_101261211	3300018072	Groundwater Sediment	MRIISIALCLAAIVTIGFPKSAAADIVSGRVLGADEKPIVNGTFAAKDAKGETTTFKSDKSGNFSVYLDPGRFTVTSSADTSLTGVIESFPQPRQQDVHLTKK
Ga0066655_101194412	3300018431	Grasslands Soil	MLRRIWIILCLAIAGAIWFSLPASADIVSGRILGADEKPIVNGTFTARNAKGEPTTFKTDKSGNFSVYLDPGKYTVSPSTDAALTGVIESFPQPRQQDVHLTRGK
Ga0066655_101352443	3300018431	Grasslands Soil	MSHTHRLPRLKRITWAMIALAIAGSIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESITFKTDKSGNFSVYLDPGKYTVSPSADASLTGVIESFPQPRQQDVRLSKGK
Ga0066667_102119431	3300018433	Grasslands Soil	MLHTHRLPRPKRITLAMIALAFAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK
Ga0066662_103218702	3300018468	Grasslands Soil	MQRTHIPPRIRPITWTTLCLAIAGAIWFALPASADIVSGHVLGPDEKPIVNGTFTARNSKGETTTFKTDKSGNFSVYLDPGKFTVSSSTDAALTGVIESFPQPRQQDVHLTKGK
Ga0190274_110496481	3300018476	Soil	IFPKVKQTTWIVLSLAIAVAVWFPPTASADIVSGRILGLDEKPIVNGTFTARDSKGETITFKSDKAGNFSLYLDPGKFTVSFSSDATLTGTIESFPQPRQQDIRLTKGK
Ga0066669_101943082	3300018482	Grasslands Soil	MLHTHRLPRPKRITLAMIALAIAGTIWFSLPASADIVSGRVLGADDKPILNGAFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK
Ga0180115_14556191	3300019257	Groundwater Sediment	SIALLLATIITIGFPESATADIVSGRILGADQKPILNGTFTARDAKGEATTFKSDKSGNFSVYLDPGKFTVTSSADAALTGVIESFPQPRQQDVHLTKK
Ga0209236_10144262	3300026298	Grasslands Soil	MLHTHRLPRPKRITLAMIALAFAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYAVSPSTDASLTGVIESFPQPRQQDVHLSRGK
Ga0209469_10387442	3300026307	Soil	MLHTHRLPRPKRITWAMIALAIAGAIWFSLPASADIVSGRVLGVDEKPIVNGTFTARNSKGESTPFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSKGK
Ga0209761_10985582	3300026313	Grasslands Soil	MLHTHRLPRPKRITLSMIALAFAGAIWFSLPASADIVSGRVLGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYAVSPSTDASLTGVIESFPQPRQQDVHLSRGK
Ga0209472_11148332	3300026323	Soil	MLHTHRLPRPKRITLAMIALAIAGTIWFSLPASADIVSGRVLGADEKPILNGAFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK
Ga0209470_10592952	3300026324	Soil	MLHTHRLPRPKRITLAMIALAFAGAIWFPLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK
Ga0209152_104227332	3300026325	Soil	MQRTYIPPRIKQITWTTLCLAIAGAIWFALPASADIVSGHVLGPDEKPIVNGTFTARNSKGETTTFKTDKSGNFSVYLDPGKYTVSPSTDAALTGVIESFPQPRQQDVHLTKGK
Ga0209801_10678723	3300026326	Soil	MLHTHRLPRPKRITLSMIALAFAGAIWFSLPASADIVSGRVLGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSKGK
Ga0209266_10426981	3300026327	Soil	MLHTHRLPRPKRITLAMIALALAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYAVSPSTDASLTGVIESFPQPRQQDVHLSKGK
Ga0209802_11519811	3300026328	Soil	MLHTHRLPRPKRITLAMIALALAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSKGK
Ga0209375_11949242	3300026329	Soil	MLHTHRLPRPKRITLAMIALAFAGAIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYAVSPSTDASLTGVIESFPQPRQQDVHLSKGK
Ga0209377_10466932	3300026334	Soil	MLHTHRLPRPKRITLSMIALAFAGAIWFSLPASADIVSGRVLGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK
Ga0209378_10475443	3300026528	Soil	MLHTHRLPRPKRITLAMIALAIAGTIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVHLSRGK
Ga0209376_11702081	3300026540	Soil	MLRRIWIILCLAIAGAIWFSLPASADIVSGRILGADEKPIVNGTFTARNAKGEPTTFKTDKSGNFSVYLDPGKYTVNPSTDAALTGVIESFPQPRQQDVHLTRGK
Ga0209577_105974391	3300026552	Soil	MGFAILLPLAARADIVSGRILGPDEKPVVSGTFTAKDAKGQTTTFKSDPKGNFSVYLDPGKFTVSSSADPSLSGTIESFPQPRQQDVRLTKK
Ga0209488_103166022	3300027903	Vadose Zone Soil	MRRITWTTLCLAIAGAIWFALPASADIVSGHVMGPDEKPIVNGTFTARNSKGEPTTFKTDKSGNFSVYLDPGKFTVSSSTDPALTGVIESFPQPRQQDVHLTKGK
Ga0170820_155588182	3300031446	Forest Soil	WIPAVASADIVSGRIFGIDEKPIANATFTAKDAKGGSTAIKTNAMGNFSVYLDPGKFTISYSADPSLTGVIESFPQPRQQDVHLKKAEGK
Ga0310813_103633072	3300031716	Soil	MIAVILAAVVAMSFASPAAADIVSGRVLGTDQKPIVNGTFTAKDAKGGATTFKSDNVGNFSVYLDPGKFTVTSSADATLTGVIESLPQPRQQDVHLTKK
Ga0307473_104837122	3300031820	Hardwood Forest Soil	MLHTHRLPRLKRITWAMIALAIAGSIWFSLPASADIVSGRILGADEKPILNGTFTARNSKGESTTFKTDKSGNFSVYLDPGKYTVSPSTDASLTGVIESFPQPRQQDVRLSKGK
Ga0307472_1005664622	3300032205	Hardwood Forest Soil	MGVLILVPLAASADIVSGRILGADEKPIVNGTFTAKDAKGQSTTFKSDPKGNFSVYLDPGKFTVSFSADSSLSGTIESFPQPRQQDVHLTKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060193

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences