Metagenome / Metatranscriptome Family F060200

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F060200
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	88 residues
Representative Sequence	DANCTLTSDLAGIYFAVQANYEQQFVSANQQALNAGVREYKAAFAKALKTMPALLRTTSATPNLPGPPPGHRGRHSRSAKPSPSHS
Number of Associated Samples	103
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.56 %
% of genes near scaffold ends (potentially truncated)	82.71 %
% of genes from short scaffolds (< 2000 bps)	84.96 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (71.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.842 % of family members)
Environment Ontology (ENVO)	Unclassified (39.098 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.880 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.88% β-sheet: 0.00% Coil/Unstructured: 49.12%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF01243	Putative_PNPOx	15.04
PF13189	Cytidylate_kin2	6.77
PF01475	FUR	4.51
PF04286	DUF445	4.51
PF04672	Methyltransf_19	4.51
PF05977	MFS_3	3.01
PF07859	Abhydrolase_3	3.01
PF01297	ZnuA	2.26
PF00440	TetR_N	2.26
PF00561	Abhydrolase_1	1.50
PF01895	PhoU	1.50
PF07676	PD40	1.50
PF01022	HTH_5	1.50
PF00196	GerE	0.75
PF13561	adh_short_C2	0.75
PF00903	Glyoxalase	0.75
PF12796	Ank_2	0.75
PF02566	OsmC	0.75
PF00872	Transposase_mut	0.75
PF00144	Beta-lactamase	0.75
PF02955	GSH-S_ATP	0.75
PF13271	DUF4062	0.75
PF16859	TetR_C_11	0.75
PF12704	MacB_PCD	0.75
PF07690	MFS_1	0.75
PF01797	Y1_Tnp	0.75
PF07885	Ion_trans_2	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	4.51
COG2733	Uncharacterized membrane-anchored protein YjiN, DUF445 family	Function unknown [S]	4.51
COG4399	Uncharacterized membrane protein YheB, UPF0754 family	Function unknown [S]	4.51
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	3.01
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	3.01
COG0189	Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily	Translation, ribosomal structure and biogenesis [J]	1.50
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.75
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.75
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.75
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.75
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.75
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.75
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	66.17 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	66.17 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	44.36 %
Unclassified	root	N/A	28.57 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	12.78 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	9.77 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.77 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.75 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.75 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.75 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	12.78 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	9.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.77 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.75 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.75 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.75 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	12.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.77 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	7.52 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.75 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.75 %
Pimelobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Pimelobacter	0.75 %
Kitasatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora	0.75 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	12.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.77 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	1.50 %
unclassified Pimelobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Pimelobacter → unclassified Pimelobacter	0.75 %
unclassified Kitasatospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → unclassified Kitasatospora	0.75 %
Streptomyces viridosporus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces viridosporus	0.75 %
Actinoplanes aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes aureus	0.75 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.75 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	12.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.77 %
Streptomyces sp. 3214.6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 3214.6	0.75 %
Streptomyces sp. OK885	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. OK885	0.75 %
Kitasatospora sp. OK780	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → unclassified Kitasatospora → Kitasatospora sp. OK780	0.75 %
Pimelobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Pimelobacter → unclassified Pimelobacter → Pimelobacter sp.	0.75 %
Streptomyces viridosporus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces viridosporus	0.75 %
Actinoplanes aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes aureus	0.75 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.75 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.75 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10650468	Not Available	610	Open in IMG/M
3300004479\|Ga0062595_100667197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	827	Open in IMG/M
3300004633\|Ga0066395_10918482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300005167\|Ga0066672_10808135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	589	Open in IMG/M
3300005332\|Ga0066388_100111842	All Organisms → cellular organisms → Bacteria	3228	Open in IMG/M
3300005332\|Ga0066388_105606003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces viridosporus	635	Open in IMG/M
3300005434\|Ga0070709_10039578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2893	Open in IMG/M
3300005440\|Ga0070705_100095680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1863	Open in IMG/M
3300005529\|Ga0070741_10057535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4585	Open in IMG/M
3300005546\|Ga0070696_100184431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1550	Open in IMG/M
3300005602\|Ga0070762_10008541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5073	Open in IMG/M
3300006175\|Ga0070712_101273234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	640	Open in IMG/M
3300006175\|Ga0070712_101502966	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300006755\|Ga0079222_10106232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1490	Open in IMG/M
3300006806\|Ga0079220_10034083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2282	Open in IMG/M
3300006854\|Ga0075425_100144560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2723	Open in IMG/M
3300006871\|Ga0075434_102630091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	503	Open in IMG/M
3300009792\|Ga0126374_10816700	Not Available	714	Open in IMG/M
3300010043\|Ga0126380_10374208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1047	Open in IMG/M
3300010046\|Ga0126384_11838180	Not Available	576	Open in IMG/M
3300010048\|Ga0126373_10152468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2198	Open in IMG/M
3300010048\|Ga0126373_10784771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1014	Open in IMG/M
3300010337\|Ga0134062_10235167	Not Available	847	Open in IMG/M
3300010358\|Ga0126370_11202882	Not Available	705	Open in IMG/M
3300010358\|Ga0126370_11918330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300010359\|Ga0126376_10087983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2331	Open in IMG/M
3300010359\|Ga0126376_13142146	Not Available	511	Open in IMG/M
3300010360\|Ga0126372_10209560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1632	Open in IMG/M
3300010360\|Ga0126372_11321149	Not Available	751	Open in IMG/M
3300010360\|Ga0126372_11996144	Not Available	627	Open in IMG/M
3300010361\|Ga0126378_10687864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1135	Open in IMG/M
3300010361\|Ga0126378_10814185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1043	Open in IMG/M
3300010361\|Ga0126378_12484350	Not Available	592	Open in IMG/M
3300010362\|Ga0126377_10841123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	978	Open in IMG/M
3300010366\|Ga0126379_10358780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1491	Open in IMG/M
3300010366\|Ga0126379_11001824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	940	Open in IMG/M
3300010366\|Ga0126379_12030530	Not Available	677	Open in IMG/M
3300010366\|Ga0126379_13032188	Not Available	562	Open in IMG/M
3300010373\|Ga0134128_10231503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2075	Open in IMG/M
3300010375\|Ga0105239_11557906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	764	Open in IMG/M
3300010376\|Ga0126381_100794657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1358	Open in IMG/M
3300010376\|Ga0126381_101440301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	996	Open in IMG/M
3300010376\|Ga0126381_102766044	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300010376\|Ga0126381_104002900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	573	Open in IMG/M
3300010399\|Ga0134127_11700581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	706	Open in IMG/M
3300010880\|Ga0126350_10777320	Not Available	558	Open in IMG/M
3300012354\|Ga0137366_11236505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300012683\|Ga0137398_10509238	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300012971\|Ga0126369_10218075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1854	Open in IMG/M
3300012971\|Ga0126369_10781862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1036	Open in IMG/M
3300012971\|Ga0126369_13447564	Not Available	518	Open in IMG/M
3300016294\|Ga0182041_11236947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	682	Open in IMG/M
3300016319\|Ga0182033_11672796	Not Available	576	Open in IMG/M
3300016341\|Ga0182035_10857667	Not Available	799	Open in IMG/M
3300016357\|Ga0182032_10102620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2022	Open in IMG/M
3300016404\|Ga0182037_10775427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300020582\|Ga0210395_10703320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Pimelobacter → unclassified Pimelobacter → Pimelobacter sp.	756	Open in IMG/M
3300020582\|Ga0210395_11166414	Not Available	567	Open in IMG/M
3300021181\|Ga0210388_11598517	Not Available	542	Open in IMG/M
3300021403\|Ga0210397_10822891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes aureus	717	Open in IMG/M
3300021407\|Ga0210383_10363641	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300021432\|Ga0210384_11610199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. OK885	555	Open in IMG/M
3300021474\|Ga0210390_10308964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	1339	Open in IMG/M
3300021474\|Ga0210390_10750564	Not Available	811	Open in IMG/M
3300021474\|Ga0210390_11521178	Not Available	529	Open in IMG/M
3300021478\|Ga0210402_11510694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300021560\|Ga0126371_11598520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	778	Open in IMG/M
3300021560\|Ga0126371_11857002	Not Available	723	Open in IMG/M
3300025915\|Ga0207693_11324186	Not Available	538	Open in IMG/M
3300025916\|Ga0207663_10646626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	834	Open in IMG/M
3300027775\|Ga0209177_10188776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300031226\|Ga0307497_10432495	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300031544\|Ga0318534_10346514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	855	Open in IMG/M
3300031545\|Ga0318541_10571970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
3300031564\|Ga0318573_10639830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	572	Open in IMG/M
3300031572\|Ga0318515_10386636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	749	Open in IMG/M
3300031640\|Ga0318555_10324922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	833	Open in IMG/M
3300031680\|Ga0318574_10179456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1211	Open in IMG/M
3300031681\|Ga0318572_10405909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	810	Open in IMG/M
3300031708\|Ga0310686_116881100	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300031719\|Ga0306917_10233732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1403	Open in IMG/M
3300031723\|Ga0318493_10454023	Not Available	705	Open in IMG/M
3300031723\|Ga0318493_10624590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300031736\|Ga0318501_10600546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	604	Open in IMG/M
3300031747\|Ga0318502_10356134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	866	Open in IMG/M
3300031747\|Ga0318502_10674172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	624	Open in IMG/M
3300031751\|Ga0318494_10639517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	622	Open in IMG/M
3300031765\|Ga0318554_10204029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1125	Open in IMG/M
3300031771\|Ga0318546_10617383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300031781\|Ga0318547_10052435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2200	Open in IMG/M
3300031781\|Ga0318547_10448830	Not Available	794	Open in IMG/M
3300031797\|Ga0318550_10284380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	802	Open in IMG/M
3300031798\|Ga0318523_10168078	Not Available	1093	Open in IMG/M
3300031799\|Ga0318565_10175586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1041	Open in IMG/M
3300031819\|Ga0318568_10458338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	795	Open in IMG/M
3300031819\|Ga0318568_10640864	Not Available	661	Open in IMG/M
3300031831\|Ga0318564_10490538	Not Available	534	Open in IMG/M
3300031845\|Ga0318511_10607738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300031880\|Ga0318544_10245613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300031893\|Ga0318536_10411125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	683	Open in IMG/M
3300031896\|Ga0318551_10354723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	830	Open in IMG/M
3300031897\|Ga0318520_10976028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → unclassified Kitasatospora → Kitasatospora sp. OK780	535	Open in IMG/M
3300031910\|Ga0306923_10562816	Not Available	1283	Open in IMG/M
3300031910\|Ga0306923_11201341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	810	Open in IMG/M
3300031910\|Ga0306923_11336311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300031912\|Ga0306921_12272886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	569	Open in IMG/M
3300031945\|Ga0310913_10443664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	922	Open in IMG/M
3300031946\|Ga0310910_10290372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1285	Open in IMG/M
3300031947\|Ga0310909_11344940	Not Available	573	Open in IMG/M
3300032001\|Ga0306922_11002003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	862	Open in IMG/M
3300032008\|Ga0318562_10013672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4080	Open in IMG/M
3300032008\|Ga0318562_10798364	Not Available	540	Open in IMG/M
3300032055\|Ga0318575_10542338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	590	Open in IMG/M
3300032060\|Ga0318505_10226895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	877	Open in IMG/M
3300032066\|Ga0318514_10344205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	789	Open in IMG/M
3300032076\|Ga0306924_10501491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1382	Open in IMG/M
3300032076\|Ga0306924_10859009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1007	Open in IMG/M
3300032205\|Ga0307472_100089381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2079	Open in IMG/M
3300032895\|Ga0335074_11476646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 3214.6	543	Open in IMG/M
3300032954\|Ga0335083_11184687	Not Available	593	Open in IMG/M
3300032955\|Ga0335076_10271454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1588	Open in IMG/M
3300033289\|Ga0310914_11520079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	573	Open in IMG/M
3300033290\|Ga0318519_10963951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	529	Open in IMG/M
3300033805\|Ga0314864_0159502	Not Available	577	Open in IMG/M
3300033806\|Ga0314865_052692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1047	Open in IMG/M
3300034820\|Ga0373959_0108656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	667	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.74%
Host-Associated	Host-Associated	5.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.74%
Plants	Host-Associated → Plants	5.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.50%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.45%
Loam	Environmental → Terrestrial → Soil → Loam	10.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.75%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.01%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.50%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.75%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.75%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.75%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_106504682	3300001593	Forest Soil	SSDLGGIYFAVQGSYEQQFVNANQQALNVAVREYKAAFAKELSKLPALLRTVSATPALPGFKGGKPPHGQIVKPGVTATPSPTRSAG*
Ga0062595_1006671971	3300004479	Soil	VADANCTLSSDLSGVYFAVQGSYEQQFVSANRQALDAGVRRYKAAFAKELKEMPALLRTTSATPNLLGPRPGHHGGQRGTAKPSPSQS*
Ga0066395_109184822	3300004633	Tropical Forest Soil	AVQANYEQQFVSANQQALDAGVREYKAAFAKAIKTMPKLLQATSATPNLLGPRPSHHGGRRGTAKPSPSHS*
Ga0066672_108081352	3300005167	Soil	TSDLAGIYFAVQANYEQQFVSANQQALNAGVREYKAAFAKALKTMPTLLQATSAVPNLPGPAAHHGKHGHSAKPSPSHS*
Ga0066388_1001118425	3300005332	Tropical Forest Soil	GIYFAVQADYEQQFVSANQQALNAGVRQYKAAFAKALKAMPTLLQTASVTPDLPGPPPGHHGKHSGAVKPSPSHS*
Ga0066388_1056060031	3300005332	Tropical Forest Soil	QIAMAVADANCTLSSDLAGIYFAVQASYERQFVSANQQALDAAVRQYKAAFAKALKTMPALLRTTSATPNLLGPHRPGHHGSNGGTATPSPGHS*
Ga0070709_100395783	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAVADANCTLSSDLSGIYFAVQASYEQQFVSANQQALNAAVRQYKAAFAQALKTMPALLRAASDTPSLPGPRRTGQPGGHGHTAKPSPSHS*
Ga0070714_1007854981	3300005435	Agricultural Soil	YEKQFVSANQQALNAGVRKYKAAFAHELKTMPILLQTTSATPNLPGPTRPAHHGGHGGTAKPSPNSPAGG*
Ga0070705_1000956801	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LSGIYFAVQASYEQQFVSANQQALNAAVRQYKAAFAQALKTMPALLRAASDTPSLPGPRRTGQPGGHGHTAKPSPSHS*
Ga0070741_100575355	3300005529	Surface Soil	TAAQNQAQIAMAVADAKCTLTSDLAGIYFAVQASYEQQFVTANQQALNAGVREYKAAFAKTLKSLPTLLQTTSAVPNLPGPARPKHHGSPSPTATPSPSRS*
Ga0070696_1001844311	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	QIAMAVADANCTLSSDLSGIYFAVQASYEQQFVSANQQALNAAVRQYKAAFAQALKTMPALLRAASDTPSLPGPRRTGQPGGHGHTAKPSPSHS*
Ga0070762_100085411	3300005602	Soil	GGPPGPPTAAQNKTQIAMAVADADCTLSSDLGGIYFAVQANYEQQFVTANQQALNAGVRQYKAAFAHALKTLPALLQAASATLNLPGPAGHGRPGPAHSKTPAPRASG*
Ga0070717_119294852	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	EKQFVSASQQALGAGVAEYEAAFAHALKIMPTLLQTTPAVPNVPGPARHGHRGGRHGAAKPSPSNS*
Ga0070712_1012732342	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	QNQAQIAMAVADANCTLSSDLSGIYFAVQASYEQQFVSANQQALNAAVRQYKAAFAQALKTMPALLRAASDTPSLPGPRRTGQPGGHGHTAKPSPSHS*
Ga0070712_1015029663	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	PGQPTAAQNQTQIAMAVADANCTLSSDLSGVYFAVQASYEKQFVSANQQALNAGIRKYKAAFAHALKTMPALLQTTSATPNLPGPPRGHHGKHGAPKPSPSHS*
Ga0079222_101062321	3300006755	Agricultural Soil	AVADANCTLSSDLSGVYFAVQASYEKQFVSANQQALNAGVRKYKAAFAKELKEMPALLRTTSATPNLIGPRPSGHHHGSAKPSPSQS*
Ga0079220_100340831	3300006806	Agricultural Soil	QIAMAVADANCTLSSDLSGVYFAVQGNYEQQFVSANRQALDAGVRRYKAAFAKELKEMPALLRTTSATPNLLGPRPGHHGGQRRTAKPSPSQS*
Ga0075425_1001445602	3300006854	Populus Rhizosphere	MAVAGANCTLSSDLSGIYFAVQASYEQQFVSANQQALNAAVRQYKAAFARALKTMPALLRAASAAPSLPGPRRPGQHGGHGHTAKPSPSHS*
Ga0075434_1026300911	3300006871	Populus Rhizosphere	SYEQQFVSANQQALNAGVRKYKAAFAKELKDMPALLRTTSATPNLIGPGPRGHHGGRHGAASPSPSHT*
Ga0126374_108167001	3300009792	Tropical Forest Soil	NTTGLPGPPTAAQNSTQIAMAVADANCTLSSDLAGIYFAVQANYEQQFVSANKLALDAGVREYKAAFAKELKALPALLQTTSATPNLPGPPPGHHPGQHSTAKPSPSHS*
Ga0126380_103742082	3300010043	Tropical Forest Soil	MLTRHEQFMAAQHPEALADANCTLSSDLSGIYFAVQADYEQQFVSASQQALNAGVRQYKAAFAKALKAMPTLLQTASVTPDPPGPPPGHHGKHSGAVKPSPSHS*
Ga0126384_118381801	3300010046	Tropical Forest Soil	NCTLSSDLAGIYFAVQASYEQQFVSANQQALDAAVRQYKAAFAHALKTMPALLRTTSATPNLPGPPPPGHQGRNGHAATPSPSHS*
Ga0126373_101524681	3300010048	Tropical Forest Soil	AVQANYEQQFVSANQQALNAGIREYKAAFTKALKDLPRLLQTTSATPNLPGPPPGHHGRHGGTVKPSPSHS*
Ga0126373_107847711	3300010048	Tropical Forest Soil	QANYEQQFVSANKQALDAGVREYKAAFAKALKTLPALLQTTSATPNLPRPPSPGHHAKPSRTAKPSPSHS*
Ga0134062_102351672	3300010337	Grasslands Soil	MAVADANCTLSSDLAGIYFAVQANYEQQFVSANQQALNAGVREYKAAFAKAIKTLPALLRTTSATPNLLGPSRRGHHAGNGGTAKPSPSHS*
Ga0126370_112028821	3300010358	Tropical Forest Soil	DLAGIYFAVQASYEQQFVSANQQALNAGVRQYKAAFAKALKTLPALLRTTSATPNLSGPAPAGHRGRPGNTAKPSPGHS*
Ga0126370_119183301	3300010358	Tropical Forest Soil	IYFAVQANYEQQFVSANQQALDAGVRQYQAAFANALKTLPALLRTASATPNLLRPARPGHHGRRGTAAKPSPSRSGRPSA*
Ga0126376_100879832	3300010359	Tropical Forest Soil	MLTRHEQFTTAQHPEALADANCTLSSDLSGIYFAVQADYEQQFVSASQQALSAGVRQYKAAFAKALKAMPTLLQTASDTPDLPGPPPGHHGKHSGAVKPSPSHS*
Ga0126376_131421461	3300010359	Tropical Forest Soil	NSTQIAMAVADANCTLSSDLAGIYFAVQANYEQQFVSANQQALNAAVRQYKAAFAKALKTMPALLRTASATPSLPGPPPPGQHGKNGGTATPSPSRS*
Ga0126372_102095602	3300010360	Tropical Forest Soil	MAPQHHPRRRARRGRHVRRGRTQILILTRHEQFTAAQHPEALADANCTLSSDLSGIYFAVQADYEQQFVSANQQALNAGVRQYKAAFAKALKAMPTLLQTASVTPGLPGPPPGHHGKHSGAVKPSPSHS*
Ga0126372_106828901	3300010360	Tropical Forest Soil	SYEQQFVSANKQALDAGVREYKAAFAKTLKTLPALLQTTSATPNLPRPPSPGHHAKPGGTSKPSPSHS*
Ga0126372_113211491	3300010360	Tropical Forest Soil	TQIAMAVADANCTLSSDLAGIYFAVQASYERQFVSANQQALDAAVRQYKAAFAKALKTMPALLRTTSATPNLAGPHRPGHHGRNGGTATPSPGHS*
Ga0126372_119961442	3300010360	Tropical Forest Soil	DANCTLSSDLAGIYFAVQASYEQQFVTANQQALNAGVREYKAAFAKALKTLPALLRTTSAAPNLLGPSRPGHHGGNGGTAKPSPGHS*
Ga0126378_106878641	3300010361	Tropical Forest Soil	MLTRHEQFTTAQHPEALADANCTLSSDLSGIYFAVQADYEQQFVSASQQALSAGVRQYKAAFAKALKAMPTLLQTASDTPNLPGPPPGHHGKHSGAVKPSPSHS*
Ga0126378_108141851	3300010361	Tropical Forest Soil	NCTLSSDLAGIYFAVQANYEQQFVSANQQALNAGVREYKAAFAKAVKTLPALLRTASAAPSLPRPAQPGHHATHSSAAKPSPTHS*
Ga0126378_124843502	3300010361	Tropical Forest Soil	KTQIAMAVADANCTLSSDLAGIYFAVQASYEQQFVSANQQALDAAVRQYKAAFAHALKTMPALLRTTSATPNLPGPPPPGHQGRNGHAATPSPSHS*
Ga0126377_108411232	3300010362	Tropical Forest Soil	MLTRHEQFTTAQHPEALADANCTLSSDLSGIYFAVQADYEQQFVSASQQALSAGVRQYKAAFAKALKAMPTLLQTASDTPDLSGPPPGHHGKHSGAVKSSPSHS*
Ga0126379_103587801	3300010366	Tropical Forest Soil	LSSDLAGIYFAVQASYEQQFVTANQQALNAGVREYKAAFAKALKTLPALLRTTSAAPNLLGPSRPGHHGGNGGTAKPSPGHS*
Ga0126379_110018241	3300010366	Tropical Forest Soil	MLTRHEQFTTAQHPEALADANCTLSSDLSGIYFAIQADYEQQFVSASQQALSAGVRQYKAAFAKALKAMPTLLQTASVTPDLPGPPPGHHGKHSGAVKSSPSHS*
Ga0126379_120305301	3300010366	Tropical Forest Soil	MAVADANCTLSSDLAGIYFAVQANYEQQFVSANQQALNAAVRQYKAAFAKALKTMPALLRTASATPSLPGPPPPGQHGKNGGTATPSPSRS*
Ga0126379_130321881	3300010366	Tropical Forest Soil	SAQIAMAVADANCTLSSDLAGIYFAVQANYEQQFVTANQQALNAGVREYKAAFAKALKTLPALLRTTSATPNLLGPTRPGHHGGNGGTAKPSPSHS*
Ga0134128_102315031	3300010373	Terrestrial Soil	PWAQAGPGAEPFRPARRTDPEQNQAQIAMAVADANCTLSSDLSGIYFAVQASYEQQFVSANQQALNAAVRQYKAAFAQALKTMPALLRAASDTPSLPGPRRTGQPGGHGHTAKPSPSHS*
Ga0105239_115579062	3300010375	Corn Rhizosphere	TLSSDLSGIYFAVQASYEQQFVSANQQALTAAVRQYKAAFARALKTMPALLRAASAAPSLAGPRRPGQHGRHGHTAKPSPSHS*
Ga0126381_1007946574	3300010376	Tropical Forest Soil	MLTRHEQFTTAQHPEALADANCTLSSDLSGIYFAVQADYEQQFVSASQQALSAGVRQYKAAFAKALKAMPTLLQTASDTPDLSGPPPGHHGKHSGAVKPSPSHS*
Ga0126381_1014403011	3300010376	Tropical Forest Soil	TTGPPGPPTAAQNSTQIAMAVADANCTLSSDLAGIYFAVQADYEQQFVSANQQALDAGVREYKAAFAKAIRTMPKLLQATPATPNLLGPRPSHHGGRSGAAKPSPGHS*
Ga0126381_1027660442	3300010376	Tropical Forest Soil	AQNKTQIAMAVADANCTLSSDLSGIYFAVQANYEQQFVSANQQALNAGVREYKAAFARALKAMPTLLQTASVTPNLPGPPAGHHGRHSGAAKPSPSHS*
Ga0126381_1040029001	3300010376	Tropical Forest Soil	QNKQQIAMAVADANCTLSSDLAGIYFAVQANYEQQFVSANKQALDAGVREYKAAFAKEIKALPTLLQTTSATPNLIVPGRPGHHGTAKPSPSHT*
Ga0134127_117005812	3300010399	Terrestrial Soil	AVADANCTLSSDLSGIYFAVQASYEQQFVSANQQALNAAVRQYKAAFAQALKTMPALLRAASDTPSLPGPRRTGQPGGHGHTAKPSPSHS*
Ga0126350_107773201	3300010880	Boreal Forest Soil	KAQIAMAVADANCTLTSDLAGIYFAVQANYEQQFVTANQQALDAGIREYKAAFAKALKTMPTMLQTTSATPNLPGPASPGHHGRHGHSARPSPSHS*
Ga0137366_112365051	3300012354	Vadose Zone Soil	YFAVQANYEQQFVSANQQALNAAVRQYKAAFAKALKTLPALLRTTSATPNLPGPPPPGHHGEHHSTAKPSPSHS*
Ga0137398_105092382	3300012683	Vadose Zone Soil	AGIYFAVQANYEQQFVSANQQALNAGVREYKAAFAKALKTMPTLLQATSAVPNLPGPAGHHGKHGHSAKPSPSHS*
Ga0126369_102180753	3300012971	Tropical Forest Soil	AQIAMAVADANCTLSTDLAGIYFAVQANYEQQFVTANQQALNAGVREYKAAFAKALKTLPALLQTTSATPNLPRPPSPGHHAKPRGTSKPSPSHS*
Ga0126369_107818622	3300012971	Tropical Forest Soil	MLTRHEQFTTAQHPEALADANCTLSSDLSGIYFAVQADYEQQFVSASQQALSAGVRQYKAAFAKALKAMPTLLQTASVTPDLPGPPPGRHGKHSGAVKSSPSHS*
Ga0126369_134475641	3300012971	Tropical Forest Soil	FAVQASYEQQFVSANQQALNAGVRQYKAAFAKALKTLPALLRTTSATPNLSGPAPAGHRGRQGNTAKPSPGQS*
Ga0157378_100599911	3300013297	Miscanthus Rhizosphere	MAVADANCTLSSDLSGIYFAVQASYEQQFVSANQQALNAAVRQYRAAFARALKTMPALLRAASAALSLPGPRRPGQPA
Ga0182041_112369471	3300016294	Soil	DANCTLSSDLAGIYFAVQASYEQQFVSANKQALDAGVREYKASFAKELKALPTLLQTTSATPNLIGPVRPGHHGTAKPSPSPS
Ga0182033_116727962	3300016319	Soil	VYFAVQANYEQQFVSANKQALDAGVREYKAAFAKALKTMPALLRTTSATPNLIGPRAGHHGGHGGGAKPSPSHS
Ga0182035_108576671	3300016341	Soil	QANYEQQFVSANQQALDAGVREYKAAFAKELKDLPTLLQTTSAVPNLLAPSQHGHHGKGGGTASPSPSHS
Ga0182032_101026201	3300016357	Soil	LSSDLAGIYFAVQANYEQQFVSANKQALDAGVREYKASFAKELKALPTLLQTTSATPNLIGPVRPGHHGTAKPSPSPS
Ga0182037_107754272	3300016404	Soil	GPPGAPAPGQNQAQIAMAVADANCTLSSDLAGIYFAVQADYEQQFVSANRQALDAGVREYKAAFAKAIKTMPELLQATSATPNLLGPRPSHHGGRSGTAKPSPSHS
Ga0210395_107033201	3300020582	Soil	QANYERQFVSANQQALNAGVREYKAAFAKAIKTMPRLLQTTSATPNLPGPLAGHHGGRHGAAKPSPSHS
Ga0210395_111664141	3300020582	Soil	YFAVQTSYEKQFVSANQQALNAGIREYKAAFAHLLKTMPTLLQTTSATPNLAGPPGAGHRGKRPGAVKPSPSHS
Ga0210388_115985171	3300021181	Soil	VQTSYEKQFVSANQQALNAGIREYKAAFAKTIKDLPSLLQTTSATPNLFGPPPPGHHGHHGTPTPAPSHS
Ga0210397_108228912	3300021403	Soil	QNKTQIAMAVADADCTLSSDLGGIYFAVQANYEQQFVTANQQALNAGVRQYKAAFAHALKTLPALLQAASATLNLPGPAGHGRPGPAHSKTPAPRASG
Ga0210383_103636412	3300021407	Soil	PNNPPSQPTAAQDKEQIAMAVADANCTLSSDLSGVYFAVQTSYEKQFVSASQQSLNAGIREYKAAFAHELKTMPALLQTTSATPNLLGPPPPGHRRGHHGLAKPSPSHS
Ga0210384_116101991	3300021432	Soil	TPSAPTAAQNKTQIAMAVADAHCTLTSDLGGIYFAVQANYERQFVSANQQALNAGVREYKAAFAKAIKTMPRLLQTTSATPNLPGPLAGHHGAKPSPSHS
Ga0210390_103089642	3300021474	Soil	SDLSGVYFAVQTSYEKQFVSASQQSLNAGIREYKAAFAHELKTMPALLQTTSATPNLLGPPPPGHRGRHHGLANPSPSHS
Ga0210390_107505642	3300021474	Soil	CTLSSDLAGIYFAVQANYEQQFVSANQQALSAGVREYKAAFAKALKAMPALLQTTSATPNLPGPPRARHRGGHTSTGKPSPSQS
Ga0210390_115211782	3300021474	Soil	AVADANCTLTSDLSGIYFAVQANYEKQFVSTNQQALNAGIREYKAAFAHTLKILPALLQTTSAVPNLPGPPPPGHRGAHHSTAKPSSSTS
Ga0210402_115106942	3300021478	Soil	DLSGIYFAVQASYEQQFVSANQQALNAAVRQYKAAFARALKTMPALLRAASAALSLPGPRRPGQPAGHGHTAKPSPSHS
Ga0126371_115985201	3300021560	Tropical Forest Soil	VQADYEQQFVSASQQALSAGVRQYKAAFAKALKAMPTLLQTASDTPNLPGPPPGHHGKHSGAVKSSPSHS
Ga0126371_118570022	3300021560	Tropical Forest Soil	SSDLAGIYFAVQANYEQQFVSANQQALDAGVRQYKAAFAKELKDLPTLLQTTSAVPNLLGPSQHGHHGKGGGTAKPSPSNS
Ga0207693_113241861	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	QNQTQIAMAVADANCTLSSDLSGVYFAVQASYEKQFVSANQQALNAGIRKYKAAFAHALKTMPALLQTTSATPNLPGPPRGHHGKHGAPKPSPSHS
Ga0207663_106466262	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AMAVADANCTLSSDLSGIYFAVQASYEQQFVSANQQALNAAVRQYKAAFAKALKDLPTLLQTTSAVPNLPGPPRPRQHGGNGGTAKPSPSHS
Ga0207641_106588602	3300026088	Switchgrass Rhizosphere	MAVADANCTLSSDLSGIYFAVQASYEQQFVSANQQALNAAVRQYKAAFAQALKTMPALLRAASDTPSLP
Ga0207683_117750721	3300026121	Miscanthus Rhizosphere	MAVADANCTLSSDLSGIYFAVQASYEQQFVSANQQALNAAVRQYKAAFAQALKTMPALLRAASDTPSLPG
Ga0209177_101887761	3300027775	Agricultural Soil	VADANCTLSSDLSGVYFAVQANYEKQFVSANQQALNAGIRQYKAAFAKTLKDMPTLLQTTSAVPNLPGPPSRGHHGRHGTAKPSPSPSS
Ga0307497_104324952	3300031226	Soil	DANCTLTSDLAGIYFAVQANYEQQFVSANQQALNAGVREYKAAFAKALKTMPALLRTTSATPNLPGPPPGHRGRHSRSAKPSPSHS
Ga0318534_103465142	3300031544	Soil	LSSDLAGIYFAVQANYEQQFVSANQQALNAGVREYKAAFAKALKTLPALLRTASAAPSLPGPPPPGHHATHSSAAKPSPTHS
Ga0318541_105719701	3300031545	Soil	YFAVQASYEKQFVSANQQALNAGIREYKAAFAKELKTMPTLLQTTSAVPNLPGPHPAGHHGKNGTAKPSPSHS
Ga0318571_101822922	3300031549	Soil	VQANYEQQFVTANQQALNAGVREYKAAFAKALRTLPALLRTTSATLNLPGPPRPGHHGGNGGTAKPSPSHS
Ga0318573_106398302	3300031564	Soil	AVQANYEQQFVSANKQALDAGVREYKASFVKELKALPTLLQTTSATPNLIGPVRPGHHGTAKPSPSPS
Ga0318515_103866361	3300031572	Soil	VQANYEQQFVSANQQALNAGVRQYKAAFAKALKTLPGQLRTASATPSLPGPPPPGHHAAHSSAAKPSPGCRMVPSAMMSPPVTIVS
Ga0318555_103249221	3300031640	Soil	SDLAGVYFAVQASYEKQFVSANQQALNAGIREYKAAFAKELKTMPTLLQTTSAVPNLPGPHPAGHHGKNGTAKPSPSHS
Ga0318574_101794563	3300031680	Soil	QIAMAVADANCTLSSDLAGIYFAVQANYEQQFVTANQQALNAGVREYKAAFAKALRTLPALLRTTSATLNLPGPPRPGHHGGNGGTAKPSPSHS
Ga0318572_104059092	3300031681	Soil	AVQANYEQQFVSANKQTLDAGVREYKAAFAKALKTMPALLRTTSATPNLIGPRAGHHGGHGSGAKPSPSHT
Ga0310686_1168811002	3300031708	Soil	LTSDLAGIYFAVQANYEQQFVGANQQALNAGVREYKAAFAKVLKTMPTLLQTTSATPNLIGPPPPGHHGGHHGAPTPSPSHS
Ga0306917_102337323	3300031719	Soil	IAMAVADANCTLSSDLAGIYFAVQANYEQQFVSANKQALDAGVREYKAAFAKELKALPALLRTTSGTPNLIGPRRSSHHGAGKPSPSPS
Ga0318493_104540232	3300031723	Soil	VGPPGAPTAAQNSAQIAMAVADANCTLSSDLAGIYFAVQANYEQQFVTANQQALNAGVREYKAAFAKALRTLPALLRTTSATLNLPGPPRPGHHGGNGGTAKPSPSHS
Ga0318493_106245901	3300031723	Soil	QIAMAVADANCTLSSDLAGIYFAVQANYEQQFVSANKQALDAGVREYKASFVKELKALPTLLQTTSATPNLIGPVRPGHHGTAKPSPSPS
Ga0318501_106005461	3300031736	Soil	PPAPPTAAQNKQQIAMAVADANCTLSSDLAGIYFAVQANYEQQFVSANKQALDAGVREYKASFVKELKALPTLLQTTSATPNLIGPVRPGHHGTAKPSPSPS
Ga0318502_103561342	3300031747	Soil	DADCTLSSDLAGIYFAVQANYEQQFVSANQQALNAGVRQYKAAFAKALKTLPGQLRTASATPSLPGPPPPGHHAAHSSAAKPSPGCRMVPSAMMSPPVTIVS
Ga0318502_106741721	3300031747	Soil	SDLAGIYFAVQANYEQQFVSANKQALDAGVREYKAAFAKALKALPALLQTTSATINLIGPARPGHHGTAKPSPSHS
Ga0318494_106395171	3300031751	Soil	SSDLAGIYFAVQANYEQQFVSANKQALDAGIREYKAAYAKELKALPTLLQTTSATPNLIGPPASHHGRQHSTAKPSPSQS
Ga0318554_102040291	3300031765	Soil	CTLSSDLAGIYFAVQANYEQQFVSANQQALNAGVREYKAAFAKALKTLPALLRTASATPSLPGPPPPGHHAAHSSAAKPSPTHT
Ga0318546_106173832	3300031771	Soil	QQIAMAVADANCTLSSDLAGIYFAVQANYEQQFVSANKQALDAGVREYKASFAKELKALPTLLQTTSATPNLIGPVRPGHHGTAKPSPSPS
Ga0318547_100524355	3300031781	Soil	YFAVQANYEQQFVSANKQALDAGVREYKAAFAKELKALPTLLQTTSATPNLIGPLRPGHHGTAKPSPSPS
Ga0318547_104488302	3300031781	Soil	MAVADANCTLSSDLAGIYFAVQANYEQQFVSANQQALNAGIREYKAAFAHALKTMPTLLQTASVTPNLPGPPHGHHGRHPGAGKPSPSHS
Ga0318550_102843802	3300031797	Soil	ANYEQQFVSANQQALNAGVRQYKAAFAKALKTLPGQLRTASATPSLPGPPPPGHHAAHSSAAKPSPGCRMVPSAMMSPPVTIVS
Ga0318523_101680782	3300031798	Soil	LSSDLAGIYFAVQANYEQQFVTANQQALNAGVREYKAAFAKALRTLPALLRTTSATLNLPGPPRPGHHGGNGGTAKPSPTS
Ga0318565_101755861	3300031799	Soil	VADANCTLSSDLAGIYFAVQANYEQQFVSANKQALDAGVREYKAAFAKELKALPTLLQTTSATPNLIGPVRPGHHGTAKPSPSPS
Ga0318568_104583382	3300031819	Soil	LSSDLSGVYFAVQASYEKQFVSANQQALNAGIREYKAAFAKELKTMPTLLQTTSAVPNLPGPHPAGHHGKNGTAKPSPSHS
Ga0318568_106408642	3300031819	Soil	MAVADANCTLSSDLAGIYFAVQANYEQQFVSANKQALDAGVREYKASFVKELKALPTLLQTTSATPNLIGPPPGHHRGQHSTAKPSPSHS
Ga0318564_104905381	3300031831	Soil	QANYEQQFVSANQQALDAGVREYKAAYAKELKNLPTLLQTTSAVPNLLAPSQHGHHGKGGGTASPSPSHS
Ga0318511_106077382	3300031845	Soil	LAGIYFAVQANYEQQFVSANQQALNAGVRQYKAAFAKALKTLPGQLRTASATPSLPGPPPPGHHAAHSSAAKPSPTHT
Ga0318544_102456131	3300031880	Soil	AVADANCTLSSDLAGVYFAVQANYEQQFVSANKQALDAGVREYKAAFAKELKALPTLLQTTSATPNLIGPLRPGHHGTAKPSPSPS
Ga0318536_104111251	3300031893	Soil	AQNSTQIAMAVADANCTLSSDLAGIYFAVQANYEQQFVSANQQALNAGIREYKAAFAHALKTMPTLLQTASVTPNLPGPPHGHHGRHPGAGKPSPSHS
Ga0318551_103547231	3300031896	Soil	NKQQIAMAVADANCTLSSDLAGIYFAVQASYEQQFVSANKQALDAGVREYKASFAKELKALPTLLQTTSATPNLIGPVRPGHHGTAKPSPSPS
Ga0318520_109760281	3300031897	Soil	AQNRAQIAMAVADANCTLSSDLAGIYFAVQANYEQQFVSANQQALNAGIREYKAAFAHALKTMPTLLQTASVTPNLPGPPHGHHGRHPGAGKPSPSHS
Ga0306923_105628161	3300031910	Soil	AVADANCTLSSDLAGIYFAVQANYEQQFVTANQQALNAGVREYKAAFAKALRTLPALLRTTSATLNLPGPPRPGHHGGNGGTAKPSPTS
Ga0306923_112013411	3300031910	Soil	TIGPSTPTAAQNRAQIAMAVADANCTLSSDLAGIYFAVQANYEQQFVSANQQALNAGIREYKAAFAHALKTMPTLLQTASVTPNLPGPPHGHHGRHPGAGKPSPSHS
Ga0306923_113363111	3300031910	Soil	YYEQQFVSANKQALDAGIREYKAAYAKELKALPTLLQTTSATPNLIGPPASHHGRQHSTAKPSPSQS
Ga0306921_122728862	3300031912	Soil	TLSSDLAGIYFAVQANYEQQFVSANQQALNAGVREYKAAFAKALKTLPALLRTASAAPSLPGPPPPGHHATHSSAAKPSPTHS
Ga0310913_104436642	3300031945	Soil	QANYEQQFVSANQQALDAGIREYKAAFAKAIKTMPELLQATSATPNLLGPRPSHHGGRSGTAKPSPSHS
Ga0310910_102903721	3300031946	Soil	ADANCTLSSDLAGIYFAVQANYEQQFVSANKQALDAGVREYKAAFAKELKALPALLRTTSGTPNLIGPRRSSHHGAGKPSPSPS
Ga0310909_113449402	3300031947	Soil	SDLAGIYFAVQANYEQQFVTANQQALNAGVREYKAAFAKALKTLPALLRTTSATPNLLGPTRPGHHGGNGGTAKPSPSHS
Ga0306922_110020032	3300032001	Soil	DADCTLSSDLAGIYFAVQANYEQQFVSANQQALNAGVREYKAAFAKALKTLPALLRTASATPSLPGPPPPGHHAAHSSAAKPSPGCRMVPSAMMSPPVTIVS
Ga0318562_100136721	3300032008	Soil	AVADANCTLSSDLAGIYFAVQADYEQQFVSANRQALDAGVREYKAAFAKAIKTMPELLQATSATPNLLGPRPSHHGGRSGTAKPSPSHS
Ga0318562_107983641	3300032008	Soil	CTLSSDLAGIYFAVQANYEQQFVSANKQALDAGVREYKASFVKELKALPTLLQTTSATPNLIGPPPGHHRGQHSTAKPSPSHS
Ga0318575_105423382	3300032055	Soil	CTLSSDLAGIYFAVQANYEQQFVSANKQALDAGVREYKASFAKELKALPTLLQTTSATPNLIGPVRPGHHGTAKPSPSPS
Ga0318505_102268951	3300032060	Soil	AGIYFAVQANYEQQFVSANQQALNAGVRQYKAAFAKALKTLPGQLRTASATPSLPGPPPPGHHAAHSSAAKPSPGCRMVPSAMMSPPVTIVS
Ga0318514_103442052	3300032066	Soil	LAGIYFAVQANYEQQFVSANKQTLDAGVREYKAAFAKALKTMPALLRTTSATPNLIGPRAGHHGGHGSGAKPSPSHT
Ga0306924_105014912	3300032076	Soil	QIALAVADANCTLSSDLAGIYFAVQANYEQQFVSANQQALDAGIREYKAAFAKAIKTMPELLQATSATPNLLGPRPSHHGGRSGTAKPSPSHS
Ga0306924_108590091	3300032076	Soil	PAPPTAAQNKQQIAMAVADANCTLSSDLAGIYFAVQANYEQQFVSANKQALDAGIREYKAAYAKELKALPTLLQTTSATPNLIGPPASHHGRQHSTAKPSPSQS
Ga0307472_1000893812	3300032205	Hardwood Forest Soil	MAVADANCTLSSDLSGIYFAVQASYEQQFVSANQQALTAAVRQYKAAFARALKTMPALLRAASAAPSLPGPRRPGQHGRHGHTAKPSPSHS
Ga0335074_114766461	3300032895	Soil	NKAQIAMAVADANCTLSSDLAGIYFAVQASYEQQFVSANQQALNAGVRAYKAAFATALKTMPTLLRTTSATPNLPGPPQPGHHGEHRGTAKPSPSHS
Ga0335083_111846872	3300032954	Soil	GAPTAAQNQQQIAMAVADANCTLSSDLAGIYFAVQASYEQQFVSANQQALNAGVRQYKAAFAKELKALPALLRTTSATLSPLGPSRPGHHGRHGAAAKPSPSHS
Ga0335076_102714541	3300032955	Soil	PGPFTQPGQPTAAQNKTQIAMAVADANCTLTSDLSGIYFAVQASYEQQFVTANQQALNAGVQAYKAAFAKALKTMPTLLRTTSATPNVPGPPLPGHHGGHNGTAKPSPSHS
Ga0310914_115200791	3300033289	Soil	VADANCTLSSDLAGVYFAVQANYEQQFVSANKQALDAGVREYKAAFAKELKALPTLLQTTSATPNLIGPLRPGHHGTAKPSPSPS
Ga0318519_109639512	3300033290	Soil	ISPPGPPTAAQNKQQIAMAVADANCTLSSDLAGIYFAVQANYEQQFVSANKQALDAGVREYKASFVKELKALPTLLQTTSATPNLIGPVRPGHHGTAKPSPSPS
Ga0314864_0159502_59_334	3300033805	Peatland	MAVADANCTLASDLAGIYFAVQANYEQQFVTANQQALNAGVREYKAAFAKALKTLPALLRTTSATPNLLGPSQRGHHGGNGGTAKPSPSHS
Ga0314865_052692_181_456	3300033806	Peatland	MAVADANCTLASDLAGIYFAVQASYEQQTVSANQQALDAGVRQYKAAFAKALKTLPALLRAASATPNLLGLPRPGDRGRPGRAARPSPSHF
Ga0373959_0108656_431_667	3300034820	Rhizosphere Soil	LSGIYFAVQASYEQQFVSANQQALNAAVRQYKAAFAQALKTMPALLRAASDTPSLPGPRRTGQPGGHGHTAKPSPSHS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060200

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences