Metagenome / Metatranscriptome Family F060368

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F060368
Family Type	Metagenome / Metatranscriptome
Number of Sequences	133
Average Sequence Length	56 residues
Representative Sequence	MTTEEWFDALTAELLAQSPFRGSEYFKRFASGSLSREQVWGHIAQHYLLIAWF
Number of Associated Samples	112
Number of Associated Scaffolds	133

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.66 %
% of genes near scaffold ends (potentially truncated)	98.50 %
% of genes from short scaffolds (< 2000 bps)	93.98 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.496 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (24.060 % of family members)
Environment Ontology (ENVO)	Unclassified (36.842 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.872 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.38% β-sheet: 0.00% Coil/Unstructured: 50.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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SCOP family	SCOP domain	Representative PDB	TM-score
c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain	d1lc0a1	1lc0	0.59911
c.37.1.8: G proteins	d4lv5b_	4lv5	0.58857
e.10.1.1: Prokaryotic type I DNA topoisomerase	d1mw9x_	1mw9	0.58724
a.113.1.1: DNA repair protein MutS, domain III	d1wb9a1	1wb9	0.58119
d.144.1.0: automated matches	d6m0ua_	6m0u	0.57945

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 133 Family Scaffolds
PF01425	Amidase	32.33
PF01661	Macro	9.02
PF04185	Phosphoesterase	9.02
PF07746	LigA	3.76
PF05036	SPOR	3.01
PF00753	Lactamase_B	3.01
PF04392	ABC_sub_bind	1.50
PF01717	Meth_synt_2	1.50
PF13403	Hint_2	1.50
PF03118	RNA_pol_A_CTD	1.50
PF03330	DPBB_1	1.50
PF12867	DinB_2	1.50
PF01979	Amidohydro_1	0.75
PF02775	TPP_enzyme_C	0.75
PF01936	NYN	0.75
PF00248	Aldo_ket_red	0.75
PF13650	Asp_protease_2	0.75
PF04909	Amidohydro_2	0.75
PF07589	PEP-CTERM	0.75
PF01547	SBP_bac_1	0.75
PF12697	Abhydrolase_6	0.75
PF00815	Histidinol_dh	0.75
PF13442	Cytochrome_CBB3	0.75

COG ID	Name	Functional Category	% Frequency in 133 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	32.33
COG2110	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	Translation, ribosomal structure and biogenesis [J]	9.02
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	9.02
COG0202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	Transcription [K]	1.50
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	1.50
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.50
COG0141	Histidinol dehydrogenase	Amino acid transport and metabolism [E]	0.75
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.50 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.50 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.50 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	39.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.01 %
Unclassified	root	N/A	1.50 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	39.10 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.26 %
Unclassified	root	N/A	1.50 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.75 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	38.35 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.50 %
Unclassified	root	N/A	1.50 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	28.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.50 %
Unclassified	root	N/A	1.50 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.75 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	28.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.50 %
Unclassified	root	N/A	1.50 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_10869029	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300001431\|F14TB_101539945	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300004463\|Ga0063356_104791747	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005171\|Ga0066677_10412166	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300005172\|Ga0066683_10046715	All Organisms → cellular organisms → Bacteria	2545	Open in IMG/M
3300005172\|Ga0066683_10533821	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	716	Open in IMG/M
3300005172\|Ga0066683_10570379	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300005174\|Ga0066680_10365938	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	918	Open in IMG/M
3300005174\|Ga0066680_10656343	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300005175\|Ga0066673_10009816	All Organisms → cellular organisms → Bacteria	4050	Open in IMG/M
3300005180\|Ga0066685_10449037	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	895	Open in IMG/M
3300005181\|Ga0066678_10427830	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	879	Open in IMG/M
3300005332\|Ga0066388_102677922	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	909	Open in IMG/M
3300005332\|Ga0066388_104175746	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005406\|Ga0070703_10336988	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005440\|Ga0070705_101487012	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300005446\|Ga0066686_10511798	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300005446\|Ga0066686_11103618	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005447\|Ga0066689_10197083	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300005518\|Ga0070699_100475888	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1133	Open in IMG/M
3300005536\|Ga0070697_100370434	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1239	Open in IMG/M
3300005536\|Ga0070697_101664263	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	571	Open in IMG/M
3300005549\|Ga0070704_100201582	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300005558\|Ga0066698_10482805	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	843	Open in IMG/M
3300005558\|Ga0066698_10532918	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300005558\|Ga0066698_10742615	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	642	Open in IMG/M
3300005560\|Ga0066670_10951694	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300005598\|Ga0066706_11337337	Not Available	541	Open in IMG/M
3300005713\|Ga0066905_100489124	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300005713\|Ga0066905_101841849	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	559	Open in IMG/M
3300005764\|Ga0066903_107790531	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300006032\|Ga0066696_11013443	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	528	Open in IMG/M
3300006034\|Ga0066656_10131124	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300006049\|Ga0075417_10762117	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	500	Open in IMG/M
3300006163\|Ga0070715_10796786	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	573	Open in IMG/M
3300006196\|Ga0075422_10445023	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300006794\|Ga0066658_10259277	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	930	Open in IMG/M
3300006796\|Ga0066665_10468233	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1037	Open in IMG/M
3300006797\|Ga0066659_10590224	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300006800\|Ga0066660_10032847	All Organisms → cellular organisms → Bacteria	3212	Open in IMG/M
3300006845\|Ga0075421_100462372	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1514	Open in IMG/M
3300006845\|Ga0075421_100905081	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300006846\|Ga0075430_100606755	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300006847\|Ga0075431_101881804	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	554	Open in IMG/M
3300006854\|Ga0075425_100330250	All Organisms → cellular organisms → Bacteria	1756	Open in IMG/M
3300006871\|Ga0075434_100759433	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300006903\|Ga0075426_10586282	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300006969\|Ga0075419_11397433	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	522	Open in IMG/M
3300007076\|Ga0075435_101663196	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	560	Open in IMG/M
3300007255\|Ga0099791_10196760	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300009088\|Ga0099830_10243525	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1421	Open in IMG/M
3300009100\|Ga0075418_10305319	All Organisms → cellular organisms → Bacteria	1697	Open in IMG/M
3300009147\|Ga0114129_10446090	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1698	Open in IMG/M
3300009156\|Ga0111538_11813046	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300009162\|Ga0075423_10269229	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300009162\|Ga0075423_10502936	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300009162\|Ga0075423_12296558	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300009815\|Ga0105070_1070822	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300010047\|Ga0126382_10312576	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300010301\|Ga0134070_10089148	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300010303\|Ga0134082_10231472	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	762	Open in IMG/M
3300010323\|Ga0134086_10015925	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2363	Open in IMG/M
3300010323\|Ga0134086_10435476	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300010333\|Ga0134080_10054810	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300010337\|Ga0134062_10702648	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	531	Open in IMG/M
3300010358\|Ga0126370_11515822	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300010360\|Ga0126372_11988408	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300010362\|Ga0126377_13426692	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300010366\|Ga0126379_11209068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	862	Open in IMG/M
3300010398\|Ga0126383_12168755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	642	Open in IMG/M
3300011271\|Ga0137393_11146187	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	660	Open in IMG/M
3300012096\|Ga0137389_11061611	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	694	Open in IMG/M
3300012200\|Ga0137382_10224979	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1295	Open in IMG/M
3300012208\|Ga0137376_11752057	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300012211\|Ga0137377_10954731	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300012351\|Ga0137386_10287576	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1183	Open in IMG/M
3300012356\|Ga0137371_11178681	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573	Open in IMG/M
3300012361\|Ga0137360_11025662	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300012410\|Ga0134060_1265255	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1263	Open in IMG/M
3300012922\|Ga0137394_10306121	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1358	Open in IMG/M
3300012929\|Ga0137404_11275142	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	677	Open in IMG/M
3300012944\|Ga0137410_11795926	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	541	Open in IMG/M
3300012972\|Ga0134077_10279148	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300012976\|Ga0134076_10018540	All Organisms → cellular organisms → Bacteria	2450	Open in IMG/M
3300012976\|Ga0134076_10434214	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300012977\|Ga0134087_10573963	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	580	Open in IMG/M
3300013306\|Ga0163162_13107421	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300014150\|Ga0134081_10306026	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M
3300014157\|Ga0134078_10028905	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300014157\|Ga0134078_10398520	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	617	Open in IMG/M
3300014968\|Ga0157379_12245706	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300015053\|Ga0137405_1251496	All Organisms → cellular organisms → Bacteria	1855	Open in IMG/M
3300015264\|Ga0137403_11497282	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300015358\|Ga0134089_10550896	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300017656\|Ga0134112_10432578	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	548	Open in IMG/M
3300017659\|Ga0134083_10057062	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300018082\|Ga0184639_10438963	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	669	Open in IMG/M
3300018468\|Ga0066662_11969123	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300020003\|Ga0193739_1124748	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	636	Open in IMG/M
3300020109\|Ga0194112_11038189	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300025318\|Ga0209519_10150381	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300025905\|Ga0207685_10123578	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300026324\|Ga0209470_1179522	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	915	Open in IMG/M
3300026325\|Ga0209152_10375133	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300026326\|Ga0209801_1037447	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2265	Open in IMG/M
3300026334\|Ga0209377_1040337	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2153	Open in IMG/M
3300026342\|Ga0209057_1230943	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300026532\|Ga0209160_1303817	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300026536\|Ga0209058_1270295	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	589	Open in IMG/M
3300026548\|Ga0209161_10571123	Not Available	506	Open in IMG/M
3300026550\|Ga0209474_10181309	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1354	Open in IMG/M
3300026550\|Ga0209474_10454096	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300027655\|Ga0209388_1047033	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300027655\|Ga0209388_1210491	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300027695\|Ga0209966_1064207	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	797	Open in IMG/M
3300027873\|Ga0209814_10072621	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1447	Open in IMG/M
3300027909\|Ga0209382_10931677	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	912	Open in IMG/M
3300027909\|Ga0209382_11520798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
3300028711\|Ga0307293_10268172	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	542	Open in IMG/M
3300031455\|Ga0307505_10655104	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031543\|Ga0318516_10194238	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300031681\|Ga0318572_10297757	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300031720\|Ga0307469_10062052	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2423	Open in IMG/M
3300031720\|Ga0307469_11040311	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300031720\|Ga0307469_11584747	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300031769\|Ga0318526_10071849	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300031892\|Ga0310893_10596476	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031911\|Ga0307412_10880615	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300031995\|Ga0307409_101626947	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300031995\|Ga0307409_102228971	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300032002\|Ga0307416_101935577	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300032068\|Ga0318553_10300737	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300032782\|Ga0335082_10279496	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.95%
Host-Associated	Host-Associated	21.05%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.44%
Plants	Host-Associated → Plants	21.05%
Aquatic	Environmental → Aquatic	1.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.26%
Freshwater	Environmental → Aquatic → Freshwater	0.75%
Sediment	Environmental → Aquatic → Sediment	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.80%
Loam	Environmental → Terrestrial → Soil → Loam	12.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.26%
Lake	Environmental → Aquatic → Freshwater → Lake	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.75%
Sand	Environmental → Terrestrial → Soil → Sand	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.02%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.26%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.75%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	24.06%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.04%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	12.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.02%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.26%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.26%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.50%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.75%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020109	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400m	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_108690291	3300000363	Soil	MTTEAWFDGLTAELLAQSPFRRSDYFKRFASGALRREQVWAHIAQHYLLIAWFP
F14TB_1015399452	3300001431	Soil	MTTESWYEGLTAELLARSPFRQSGYFKRFAAGTLSREQVWGHIVQHYLLIAAFP
Ga0063356_1047917472	3300004463	Arabidopsis Thaliana Rhizosphere	MTNEEWYEALTQELLAQSPFRRSEYFKRFASGTLTTEQVWGHIGQWYFLIAWFPRIFSGI
Ga0066677_104121661	3300005171	Soil	MTTTTEQWFDSLIAELLAQNPFRRSEYFKRFASGSLSREQVWGHIAQHY
Ga0066683_100467151	3300005172	Soil	MTTEAWFDALTGELLARSPFRASEYFKRFAAGALTREQVWAHIAQHYLLIAW
Ga0066683_105338212	3300005172	Soil	MTTEEWFDALTAELLAQSPFRGSEYFKRFASGSLSREQVWGHIAQHYLLIAWF
Ga0066683_105703791	3300005172	Soil	MTPEAWFDGLTAELLARSPFRRSEYFRRFAAGTLSRDQVWGHISQHY
Ga0066680_103659382	3300005174	Soil	MTNEEWFEGVTSELVARSPFRRSEYFKRFASGALPTAQAWVHLSQHYLLIAWFPRIFSGIHARC
Ga0066680_106563432	3300005174	Soil	MTPEEWFEALTAELLARSPFRRSDYFKRFADGALSREQVWGHVAQHYLLV
Ga0066673_100098161	3300005175	Soil	MTTEDWFDALTAELLQQSPFRRSEYFRRFASGALSRADVWGHIAQHYLLIAW
Ga0066685_104490371	3300005180	Soil	MTNEEWFEGVTSELVARSPFRRSEYFKRFASGALPTAQAWVHLSQHYLLIAWFPRIF
Ga0066678_104278301	3300005181	Soil	MTNEEWFEGVTSELVARSPFRRSEYFKRFASGALPTAQAWVHLSQHYLLIA
Ga0066388_1026779223	3300005332	Tropical Forest Soil	MTTEEWYDGLTASLLADSPFRRSDYFKRFASGTLTREQVWGHIAQHYLLIAWFP
Ga0066388_1041757461	3300005332	Tropical Forest Soil	MTTEEWFDTLTGELLARNPFRTSEYFKRFAAGALTREQVWAHIAQHYLLIAWFPRIF
Ga0070703_103369881	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTTEQWFDSLIAELLAQNPFRRSEYFKRFASGSLRREQVWGHIAQHYLLIAWFPRIFS
Ga0070705_1014870122	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTTEEWYDALTAELLAQSPFRRSEYFKRFASGTLSGAQVWSHIAQHY
Ga0066686_105117982	3300005446	Soil	MTTAEWFDALTAELLAQSPFRRSEYFKRFASGALTREQVWSHIAQHYLLIAWFP
Ga0066686_111036182	3300005446	Soil	MTPEAWFDGLTAELLARSPFRRSEYFRRFAAGTLSRDQVWGHISQHYLLIAEF
Ga0066689_101970833	3300005447	Soil	MTNEEWFDRVTAELVAQSPFRRSEYFKRFAAGALTKDQAWIHLAQHYLLIAWFPRIFS
Ga0070699_1004758883	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTTEDWFEALTAELLAQSPFRRSEYFTRFASGALSREQVWAHISQHYLLIAW
Ga0070697_1003704341	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTTEDWFEALTAELLAQSPFRRSEYFTRFASGALSREQVWAHISQHYLLIAWFPRIFSGI
Ga0070697_1016642631	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTTEEWYEGLTAALLAESPFRRSDYFKRFASGTLTREQIWGHIAQHYLLIAW
Ga0070704_1002015821	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTTESWYDGLTAELLARSPFRQSGYFKRFAAGTLTREQVWGHIGQHYLLIEAF
Ga0066698_104828051	3300005558	Soil	MTNEEWFETLTAELLAQSPFRRSEYFKRFASGALTREQVWGHIGQWYFLIAWFPRIFSG
Ga0066698_105329181	3300005558	Soil	MTTTTEQWFDSLIAELLAQNPFRRSEYFKRFASGSLSREQVWGHIAQHYLLIAW
Ga0066698_107426151	3300005558	Soil	MTTEEWFEGLTASLLAESPFRRSDYFKRFASGALTREQVWGHIAQHYLLI
Ga0066670_109516941	3300005560	Soil	MTTEDWFEGLTAELLAQSPFRGSEYFRRFAAGTLSREQVWGHIAQHYLL
Ga0066706_113373371	3300005598	Soil	MTNEEWFDRVTAELVAQSPFRRSEYFKRFAAGALTKDQAWIHLAQHYLLIAWFPRIFSGI
Ga0066905_1004891242	3300005713	Tropical Forest Soil	MTTEEWYDSLTAELLAHNPFRHSEYFKRFAGGSLSREQVWGHIAQ
Ga0066905_1018418492	3300005713	Tropical Forest Soil	MTNEEWFEGVTSELVARSPFRRSEYFKRFASGALPRSQAWIHLSQHYLLIAWFPRIFS
Ga0066903_1077905312	3300005764	Tropical Forest Soil	VTTEEWYDSLTQELLAQNPFRRSEYFKRFSAGSLSREQVWGHIAQHYLLIAWFPRIFSGIHTRCE
Ga0066696_110134432	3300006032	Soil	MTTEDWFDALTAELLQQSPFRRSEYFRRFASGALSRADVWGHIAQHYLLIAWFPRIFSGIHTRC*
Ga0066656_101311241	3300006034	Soil	MTTEEWYEGVTASLLAESPFRRSDYFKRFASGSLTREQVWGHIAQHYLLIAWFPRIFSGIHTRCDD
Ga0075417_107621171	3300006049	Populus Rhizosphere	MTTEEWHDGLTDALLAESPFRRSDYFKRFASGTLTREQIWGHIAQHYLLIAWFPRIFSGI
Ga0070715_107967861	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MNTEQWFEPLRDELLARNPFRGSEYFKRFAAGTLTREQAWGHIAQHYLLVAWFPRIFS
Ga0075422_104450232	3300006196	Populus Rhizosphere	MTTEEWFDTLTGELLARNPFRTSEYFKRFAAGTLTREQVWAHIAQHY
Ga0066658_102592771	3300006794	Soil	MTTEEWYEAVIASLLAESPFRRSDYFKRFASGSLTREQVWGHIAQHYLLIA
Ga0066665_104682331	3300006796	Soil	MTTEEWYEAVIASLLAESPFRRSDYFKRFASGSLTREQVWGHIAQHYLLIAWFPRI
Ga0066659_105902243	3300006797	Soil	MTNEEWFEGVTSELVARSPFRRSEYFKRFASGALPTAQAWVHLSQHYLLIAWFPRIFS
Ga0066660_100328471	3300006800	Soil	MTTEEWYEAVIASLLAESPFRRSDYFKRFASGSLTREQVWGHIAQHYLLIAW
Ga0075421_1004623723	3300006845	Populus Rhizosphere	MTTEEWYDGLTATLLAESPFRRSDYFKRFASGTLTREQIWGHIAQHYL
Ga0075421_1009050812	3300006845	Populus Rhizosphere	MTTEEWFDALVAELLAQNPFRRSEYFKRFASGSLTREQVWGHIAQHYLLIAWFPRIFSGIHTRC
Ga0075430_1006067551	3300006846	Populus Rhizosphere	MTTEEWYEGLTAELLAQSPFRGSEYFKRFASGSLTREQVWGHIAQHYLL
Ga0075431_1018818042	3300006847	Populus Rhizosphere	MTTEEWYDGLTATLLAESPFRRSDYFKRFASGTLTREQIWGHIAQHYLLIAWF
Ga0075425_1003302501	3300006854	Populus Rhizosphere	MTTEQWFDSLTAELLAQNPFRRSEYFKRFAAGSLSREQVWGHIAQHYLLIAW
Ga0075434_1007594331	3300006871	Populus Rhizosphere	MTTEQWFDSLTAELLAQNPFRRSEYFKRFAAGSLSREQVWGHIAQHYLLIAWFPRIFSGIHTRC
Ga0075426_105862822	3300006903	Populus Rhizosphere	MTTEQWFDALVAELLAQNPFRRSEYFKRFAAGSLSREQVWGHIAQHYLLIAWFPRIFSGIHTRCD
Ga0075419_113974332	3300006969	Populus Rhizosphere	MTTEQWYDALTAELLARSPFRESDYFKRFAAGALTREQVWGHMGQHYMIITWFPRIFSGI
Ga0075435_1016631962	3300007076	Populus Rhizosphere	MTTEAWYEGVTAALLAESPFRRSDYFKRFASGTLTREQVWGHIAQHYL
Ga0099791_101967602	3300007255	Vadose Zone Soil	MTPEEWFETLTGELLAGSPFRRSEYFKRFANGALSREQVWGHIAQHYLLVAWFPRIFSGIHARC
Ga0099830_102435252	3300009088	Vadose Zone Soil	MTNEEWFDGVTAELVKQSPFRHSEYFQRFAAGKLAKEQAWIHLAQHYLLIAWFPRIFSGIHSRCEDL*
Ga0075418_103053192	3300009100	Populus Rhizosphere	MAMTTEEWFDALVAELLAQNPFRRSEYFKRFASGSLTREQVWGHIAQHYLLIAWFPRIFSGIHTRC
Ga0114129_104460901	3300009147	Populus Rhizosphere	MTTEEWHDGLTDALLAESPFRRSDYFKRFASGTLTREQLWGHIAQHYLLIAWF
Ga0111538_118130462	3300009156	Populus Rhizosphere	MTTEQWFDSLTAELLAQNPFRRSEYFKRFAAGSLSREQVWGHIAQHYLLIAWFPRIFSGI
Ga0075423_102692292	3300009162	Populus Rhizosphere	MTTEQWFDSLTAELLAQNPFRRSEYFKRFAAGSLSREQVWGHIAQHYLLIAWFPR
Ga0075423_105029361	3300009162	Populus Rhizosphere	MNNEVWFEDVTAELLARSPFRQSEYFKRFAAGLLTTEQAWVHLAQHYLLIAWFPRIFSGIHSRCE
Ga0075423_122965581	3300009162	Populus Rhizosphere	MTTEAWYEGLTAELLARSPFRRSEYFKRFASGTLTREQVWAHIAQHYLLIAWFPRI
Ga0105070_10708222	3300009815	Groundwater Sand	MMTEEWFDTLTAELLAQSPFRRSEYFKRFASGTLTHEQVWGHIAQHYLLIAWFPRIFSGI
Ga0126382_103125761	3300010047	Tropical Forest Soil	MTTEEWYDSLTAELLAQNPFRRSEYFKRFAGGSLSREQVWGHIAQHYLLIAWFPRIFS
Ga0134070_100891482	3300010301	Grasslands Soil	MTPEEWFEALTAELLARSPFRRSDYFKRFADGALSREQVWGHVA
Ga0134082_102314721	3300010303	Grasslands Soil	MTTDEWYGGVTAALLAESPFRRSDYFKRFASGTLTREQVWGHIAQHYLLIAWFPRIFS
Ga0134086_100159254	3300010323	Grasslands Soil	MTTENWFEALTAELLAQSPFRRSEYFTRFASGALSREQVWAHISQHYLLIAWF
Ga0134086_104354762	3300010323	Grasslands Soil	MTPEEWFEALTAELLARSPFRRSDYFKRFADGALSREQVWGHV
Ga0134080_100548101	3300010333	Grasslands Soil	MTTEEWFDVLTAELLARSPFRCSEYFRRFAAGALSRDQVWAHISQHYLLIA
Ga0134062_107026481	3300010337	Grasslands Soil	MTTEDWFEGLTAELLAQSPFRGSEYFRRFAAGTLSREQVWGHIAQHYLLIAW
Ga0126370_115158221	3300010358	Tropical Forest Soil	MTTEEWFDTLTGELLARNPFRTSEYFKRFAAGTLTREQVWAHIAQHYLLIAWFPRIFSG
Ga0126372_119884081	3300010360	Tropical Forest Soil	MTTEEWYDSLTAELLAQNPFRGSEYFKRFSAGSLSREQVWGHIAQHYLLIAWF
Ga0126377_134266922	3300010362	Tropical Forest Soil	MTSEEWFDGVTQELLAQSPFRRSEYFKRFASGALTREQVWGHIGQWYFLIAWFPRIFSGIHA
Ga0126379_112090681	3300010366	Tropical Forest Soil	MTADWFDGVKAELLVQNPFRRSEYFRRFASGALTREQAWGHISQWYFLICWF
Ga0126383_121687551	3300010398	Tropical Forest Soil	MTADWFDGVKAELLAQNPFRKSEYFRRFASGALSREQAWGHISQWYFLICWFPRM
Ga0137393_111461871	3300011271	Vadose Zone Soil	MTTEDWFEALTAELLAQSPFRRSEYFTRFASGALSREQVWAHISQHYLLIAWFPRIFSGIHTRCEDV
Ga0137389_110616112	3300012096	Vadose Zone Soil	MTTEEWYEAVTATLLAESPFRRSDYFKRFASGTLTREQVWGHIAQHYLLI
Ga0137382_102249793	3300012200	Vadose Zone Soil	MTTEDWFEGLTAELLAQSPFRGSEYFRRFAAGTLSRDQVWGHISQHYLLIAEFPRIFSGIHT
Ga0137376_117520571	3300012208	Vadose Zone Soil	MTPEAWFDGLTAELLARSPFRRSEYFRRFAAGTLSRDQVWGHISQHYL
Ga0137377_109547311	3300012211	Vadose Zone Soil	MTNEEWFETLTAELLAQSPFRRSEYFKRFASGALTREQVWGHIGQWYFLIAWFPRIFSGIHAR
Ga0137386_102875761	3300012351	Vadose Zone Soil	LTAELLAQSPFRRSEYFTRFASGALSREQVWAHISQHYLLIAWFPRIF
Ga0137371_111786811	3300012356	Vadose Zone Soil	MTTDEWYGGVTAALLAESPFRRSDYFKRFASGTLTREQVWGHIAQHYL
Ga0137360_110256622	3300012361	Vadose Zone Soil	MTTEQWFDSLTAELLAQNPFRRSEYFKRFSAGSLSREQVWGHIAQ
Ga0134060_12652553	3300012410	Grasslands Soil	MTTENWFEALTAELLAQSPFRRSEYFTRFASGALSREQVWAHISQHYLLIAWFPRIFSGIHTRCDD
Ga0137394_103061213	3300012922	Vadose Zone Soil	MTTEEWFDALTGELLARSPFRASEYFKRFAAGALTREQVWAHIAQHY
Ga0137404_112751421	3300012929	Vadose Zone Soil	MTTDEWYGGVTAALLAESPFRRSDYFKRFASGTLTKDQVWGHIAQHYLLIAW
Ga0137410_117959262	3300012944	Vadose Zone Soil	MTTEQWFDSLTAELLAQNPFRRSEYFKRFSSGSLTLEQVWAHIAQHYLLIAWFPRIFSGIHTRCD
Ga0134077_102791482	3300012972	Grasslands Soil	MTTEQWFDALTAELLAQSPFRRSEYFKRFASGALTREQVWGHIAQHYLLIAWFPRIFSG
Ga0134076_100185401	3300012976	Grasslands Soil	MTTEEWYEGVTASLLAESPFRRSDYFKRFASGSLTREQVWGHIAQHYLLIAWFPR
Ga0134076_104342142	3300012976	Grasslands Soil	MTTTTEQWFDSLIAELLAQNPFRRSEYFKRFASGSLSREQVWGHIAQHYLLIAWFPR
Ga0134087_105739632	3300012977	Grasslands Soil	MTTAEWYEAVIASLLAESPFRRSDYFKRFASGSLTREQVWGHIAQHYLLIAWFPEAKRL
Ga0163162_131074211	3300013306	Switchgrass Rhizosphere	MTSEEWFDGITEELLAQSPFRRSEYFKRFASGTLTREQVWGHIGQWYFLIAWFPRIFSGIHARCDD
Ga0134081_103060261	3300014150	Grasslands Soil	MTNEEWFEGVTSELVARSPFRRSEYFKRFASGALPTAQAWVHLSQHYLLIAWFPRIFSG
Ga0134078_100289051	3300014157	Grasslands Soil	MTPEAWFDGLTAELLARSPFRRSEYFRRFAAGTLSRDQVWGHISQHYLLIAEFPRIFS
Ga0134078_103985201	3300014157	Grasslands Soil	MTTEDWFEGLTAELLAQSPFRGSEYFRRFAAGTLSREQVWGHIAQHYLLIAWF
Ga0157379_122457061	3300014968	Switchgrass Rhizosphere	MTTEQWFDSLTAELLAQNPFRRSEYFKRFAAGSLGREQVWGHIAQHYLLIAWFPR
Ga0137405_12514963	3300015053	Vadose Zone Soil	MTTEAWYEGVTATLLAESPFRRSDYFKRFASGTLTREQVWGHIAQHYLLIAWFPRIFSGIHTR
Ga0137403_114972822	3300015264	Vadose Zone Soil	MTPEEWFEALTAELLARSPFRRSEYFKRFADGALSREQVWGHIAQHYLL
Ga0134089_105508961	3300015358	Grasslands Soil	MTTEQWFDSLTADLLAQNPFRRSEYFKRFASGSLSREQVWGHIAQHYLLIAWFPRIFSGIHTRCED
Ga0134112_104325781	3300017656	Grasslands Soil	MTTENWFEALTAELLAQSPFRRSEYFTRFASGALSREQVWAHISQHYLLIAW
Ga0134083_100570621	3300017659	Grasslands Soil	MTNEEWFEGVIAELVAHSPFRRSEYFKRFASGALPKPQAWVHLSQHYLLIAWFPRIFSGIHARCEDLDVRK
Ga0184639_104389631	3300018082	Groundwater Sediment	MTTEDVMTTEEWYDTLTAELLAQSPFHRSDYFKRFASGDLSREQVWGHIAQHYLLIAWFPRIFSGIHARCE
Ga0066662_119691232	3300018468	Grasslands Soil	MTTEQWFDSLTADLLAQNPFRRSEFFKRFASGSLSRDQVWGHIAQHYLLIAWF
Ga0193739_11247481	3300020003	Soil	MTTESWYDALTAELLARSPFRQSGYFKRFAAGTLTREQVWGHIAQ
Ga0194112_110381891	3300020109	Freshwater Lake	MTNEEWFDAVTHELLARSPFRRSEYFKRFASGALTKDQVWGHMAQHYMIITWFPRI
Ga0209519_101503813	3300025318	Soil	MTTEEWYEALTQELLAQSPFRRSEYFKRFAAGTLSREQVWGHIAQHYLLIAWFPR
Ga0207685_101235782	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTTEQWFDSLTAELLAQNPFRRSEYFKRFAAGSLSREQVWGHIGQHYLLIAWFPRIFS
Ga0209470_11795223	3300026324	Soil	MTTEDWFEGLTAELLAQSPFRGSEYFRRFAAGTLSREQVWGHIAQHYLLIAWFPRIFSGIHT
Ga0209152_103751332	3300026325	Soil	MTTEEWFDSLTAELLARNPFRRSEYFKRFASGSLSREQVWGHIAQ
Ga0209801_10374475	3300026326	Soil	MTNEQWFDGVIGELVAQSPFRRSEYFKRFASGALPTAQAWVHLSQHYLLIAWFPRIFSG
Ga0209377_10403374	3300026334	Soil	MTNEQWFDGVIGELVARSPFRRSEYFKRFASGALPTAQAWVHLSQHYLLIAWFPRIFSGIHARCEELEVRKDCARHLL
Ga0209057_12309432	3300026342	Soil	MTTEEWFDSLTAELLAQNPFRRSEYFKRFASGSLSREQVWGHIAQHYLLIAWFPRIFSGIHT
Ga0209160_13038171	3300026532	Soil	MTTEEWYEGVTAALLAESPFRRSDYFKRFASGTLTREQVWGHIAQHYLLIAWFPRI
Ga0209058_12702951	3300026536	Soil	MTNEEWFDRVTAELVAQSPFRRSEYFKRFAAGALTKDQAWIHLAQHYLLIAWFPRIFSGIHSRC
Ga0209161_105711232	3300026548	Soil	MTNEEWFDRVTAELVAQSPFRRSEYFKRFAAGALTKDQAWIHLAQHYLLIAWFPRIFSGIHSRCESLE
Ga0209474_101813092	3300026550	Soil	MTTEEWYEAVIASLLAESPFRRSDYFKRFASGSLTREQVWGHIAQHYLLIAWFPRIFSGIHTRCDELDV
Ga0209474_104540961	3300026550	Soil	MTTEDWFDALTAELLQQSPFRRSEYFRRFAAGTLSRDQVWGHISQHYLLIAE
Ga0209388_10470331	3300027655	Vadose Zone Soil	MTNEEWFEGVTSELVARSPFRRSEYFKRFASGALPTAQAWVHLSQHYLLIAWFPRIFSGIHARCDDLDARKDCAR
Ga0209388_12104911	3300027655	Vadose Zone Soil	MTPEEWFETLTGELLAGSPFRRSEYFKRFANGALSREQVWGHIAQ
Ga0209966_10642072	3300027695	Arabidopsis Thaliana Rhizosphere	MTNEEWYDALTAELLARSPFRESDYFKRFAAGALTREQVWGHMGQHYMIITWFPRIFSGI
Ga0209814_100726213	3300027873	Populus Rhizosphere	MTTEEWYEGLTASLLAESPFRRSDYFKRFASGTLTREQIWGHIAQHY
Ga0209382_109316773	3300027909	Populus Rhizosphere	MTTEEWYDGLTATLLAESPFRRSDYFKRFASGTLTREQIWGHIAQHYLLIAW
Ga0209382_115207981	3300027909	Populus Rhizosphere	MTNEEWFEALTQELLAQSPFRQSEYFKRFASGTLTREQVWCHIGQWYFLIAWFPR
Ga0307293_102681721	3300028711	Soil	MTTESWYDTLTAELLAQSPFRQSGYFKRFAAGTLSREQVWGHIGQHYLLIEAFPRIFS
Ga0307505_106551042	3300031455	Soil	MTTEQWFDSLTAELLAQNPFRRSEYFKRFSAGSLSREQVWGHIAQHYLLIAWF
Ga0318516_101942381	3300031543	Soil	MTTDEWYDSLTAELLAQNPFRRSEYFKRFSAGTLSREQVWGHIAQHYLLIA
Ga0318572_102977573	3300031681	Soil	MTTDEWYDSLTAELLAQNPFRRSEYFKRFSAGTLSREQVWGHIAQHYFLIAW
Ga0307469_100620521	3300031720	Hardwood Forest Soil	MTTEQWFDSLIAELLAQNPFRRSEYFKRFASGSLSREQVWGHIAQHYLLI
Ga0307469_110403111	3300031720	Hardwood Forest Soil	MTTEVWFDALTGELLAQSPFRASEYFKRFAAGALTREQVWAHIAQHYLLIA
Ga0307469_115847471	3300031720	Hardwood Forest Soil	MTNDEWFEALTQELLAQSPFRRSEYFKRFASGTLTKDEVWSHIGQWYFLI
Ga0318526_100718491	3300031769	Soil	MTTDEWYDSLTAELLAQNPFRRSEYFKRFSAGTLSREQVWGHIAQHYFL
Ga0310893_105964762	3300031892	Soil	MTTEQWFDSLTAELLAQNPFRRSEYFKRFAAGSLSREQVWGHIAQHYLLIAWFPRIFSGIHTRCED
Ga0307412_108806152	3300031911	Rhizosphere	MTNEEWFEALTQELLAQSPFRRSEYFKRFASGALTREQVWGHMAQHYLIIA
Ga0307409_1016269472	3300031995	Rhizosphere	MTTEEWFDGLTAELLAQSPFRRSDYFKRFASGTLTREQVWAHIAQHYLLIAWFPRI
Ga0307409_1022289712	3300031995	Rhizosphere	MTTEAWFDGLTAELLAQSPFRRSDYFKRFASGALSREQVWAHIAQHYLLIAWFPRIFSGIHTRCEE
Ga0307416_1019355772	3300032002	Rhizosphere	MSTEEWFDVLTHELLAQSPFRRSEYFKRFASGSLTKEQVWGHMA
Ga0318553_103007371	3300032068	Soil	MTTDEWYDSLTAELLAQNPFRRSEYFKRFSAGTLSREQVWGHIAQHYLL
Ga0335082_102794962	3300032782	Soil	MTTEQWFDALTAELLAQNPFRRSEYFKRFASGSLSREQVWGHIAQHYLLIAWVPRIFSG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060368

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences