NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F060588

Metagenome Family F060588

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F060588
Family Type Metagenome
Number of Sequences 132
Average Sequence Length 40 residues
Representative Sequence SHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNIC
Number of Associated Samples 17
Number of Associated Scaffolds 132

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.56 %
% of genes near scaffold ends (potentially truncated) 94.70 %
% of genes from short scaffolds (< 2000 bps) 81.06 %
Associated GOLD sequencing projects 17
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (88.636 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms
(95.454 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)



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Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 55.00%    β-sheet: 0.00%    Coil/Unstructured: 45.00%
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510152025303540SHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNICSequenceα-helicesβ-strandsCoilSS Conf. score
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Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



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Phylogeny

NCBI Taxonomy

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All Organisms
Unclassified
11.4%88.6%
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Associated Scaffolds





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Environmental Properties

Associated Habitat Types

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Marine Gutless Worms Symbiont
Marine Gutless Worms Symbiont
Marine Gutless Worms
3.0%95.5%
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Associated Samples


Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0049095_1015083023300003774Marine Gutless Worms SymbiontSHAGPATWSALPDNVRTVADPVKFEKLLKSNYMRMAFSVC*
Ga0056135_1010021313300005652Marine Gutless Worms SymbiontSHAGPSTWNTLPDNIRTVADPVKFRELLKSHYFNAAFNIC*
Ga0056134_1048259623300005970Marine Gutless Worms SymbiontTWNTLPDNIRTVADPVKFRKLLKSHYFNAAFNIC*
Ga0056108_140625513300008215Marine Gutless Worms SymbiontPSTWNTLPDNTRTVADPVKFRKLLKSHYFNAAFNIR*
Ga0056108_146533313300008215Marine Gutless Worms SymbiontGPSTWNTLPDNIRTVADPVKFRKLLKSHYFNAAFNIC*
Ga0126333_109595023300010290Marine Gutless WormsSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFSQAFNTC*
Ga0126333_109611013300010290Marine Gutless WormsFSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFSQAFNIC*
Ga0126333_109689523300010290Marine Gutless WormsAFSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFSQAFNIR*
Ga0126333_110518623300010290Marine Gutless WormsAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNIC*
Ga0126333_117866123300010290Marine Gutless WormsERAFSHAGPATWNALSDHIRTVADPVKFRKLLKSHYFSEAFNTC*
Ga0126333_119116113300010290Marine Gutless WormsPATWNALPDLIRTVADPVKFRKLLKSHYFSQAFNAC*
Ga0126333_120697813300010290Marine Gutless WormsAGPATWNALPDHIRTVADPVKFRKLLKSHYFSRALNIC*
Ga0126333_122091913300010290Marine Gutless WormsAFSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFSRAFNIC*
Ga0126333_127740913300010290Marine Gutless WormsSHAGPATWNALPDHIRTVADPVMFRKLLKSHHFSQAFNTC*
Ga0126326_102299013300010292Marine Gutless WormsAFSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNIG*
Ga0126326_111253313300010292Marine Gutless WormsERAFSHAGPATWNALPDHIRTVADPVKFRKLLKSIYFSQAFNI*
Ga0126326_111284213300010292Marine Gutless WormsTKFGERAFSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFCQAFNIC*
Ga0126326_115630613300010292Marine Gutless WormsPATWNALPDHIRTVADPVKFRKLLKSHYFSQACNIC*
Ga0126326_117566513300010292Marine Gutless WormsGPATWNALPDHIRIVADPVKFRKLLKSLYFSQAFNIC*
Ga0126326_118657513300010292Marine Gutless WormsPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNIC*
Ga0126326_120782613300010292Marine Gutless WormsPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFKIC*
Ga0126326_122558013300010292Marine Gutless WormsGPATWNALPDHIRTVADPVKFRKLLKSLYFSQAF*
Ga0126326_123246313300010292Marine Gutless WormsMQVCTSLQKFGERAFSHAGPATWNALPDNIRTVADPVKFRKLLKSLY
Ga0126326_133622613300010292Marine Gutless WormsSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNIC*
Ga0126326_135424823300010292Marine Gutless WormsATWNALPDHIRTVADPVKFRKLLKSLYFSQAFNIC*
Ga0126326_138281713300010292Marine Gutless WormsGPATWNALPDHIRTVADPVKFRKLLKSHCFSQAFNIC*
Ga0126332_1001212913300010294Marine Gutless WormsAFSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFSQAFNR*
Ga0126332_1002650413300010294Marine Gutless WormsMRVHRPATWNALPDHIRTVADPVKFRKLLKSLYFSQAFNIC*
Ga0126332_1003967413300010294Marine Gutless WormsATWNALPDNIRTVADPVKFRKLLKSLYFSQAFNIC*
Ga0126332_1010218013300010294Marine Gutless WormsSHAGPAAWNALPDHIRTVADPVQFRKLLKSHYFCQAFNIC*
Ga0126332_1011003113300010294Marine Gutless WormsTWNALPDHIRTVADPVKFRKLLKSLYFSQAFNIW*
Ga0126332_1011588813300010294Marine Gutless WormsGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNIC*
Ga0126332_1015649313300010294Marine Gutless WormsGERAFSHAGPATWNALPDNIRTVADPVKFRKLLKSHYFSQACNIC*
Ga0126332_1016450923300010294Marine Gutless WormsAFSHAGPATWNALPDHIRTVADPVKFRKLLKSLYFSQAFNTC*
Ga0126332_1020583713300010294Marine Gutless WormsAFSHAGPATWNALPDHIRTVADPVKFRKLLKSHCFSQAFNIC*
Ga0126332_1023044113300010294Marine Gutless WormsAFSHAGPATWNALPDHIRTVADPVMFRKLLKSHYFSQAFNSC*
Ga0126332_1027452413300010294Marine Gutless WormsRAFSHGGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNTC*
Ga0126332_1027512413300010294Marine Gutless WormsATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNIC*
Ga0126332_1028053213300010294Marine Gutless WormsGERAFSHAGPATWNAVPDLIRTVADPVKFRKLLKSLYFSQAFNIC*
Ga0126332_1032628113300010294Marine Gutless WormsGPATWNALPDHIRTVADPVKFRKLLKSHYFTQAFNIC*
Ga0126332_1035959813300010294Marine Gutless WormsFSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNIC*
Ga0126332_1036269313300010294Marine Gutless WormsERAFSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFSQAF*
Ga0126332_1036847513300010294Marine Gutless WormsPATWNALPDHIRTVTDPVKFRKLLKSHYFSQAFNIC*
Ga0126334_1000807533300010295Marine Gutless WormsMVLTCFYEHAGPATWNALPDHMRTVADPVKFRKLLKSLYFSQAFNIC*
Ga0126334_1004787353300010295Marine Gutless WormsRAFSHAGPATWNALPDHIRTVADPVKFRKLLKSLYFSQAFKIC*
Ga0126334_1005487743300010295Marine Gutless WormsRAFSHADPATWNAMPDTIRTVADPVQFRKLHKSLYFSEAFDIF*
Ga0126334_1009419913300010295Marine Gutless WormsHAGRATWNALPDHIRTVADPVKFRKLLKSNYFSQAFNIC*
Ga0126334_1011594113300010295Marine Gutless WormsRAGVLTWNALPDHIRTVADPVKFRELLKSHYFSQAFNIC*
Ga0126334_1012231233300010295Marine Gutless WormsAGPATWNALPDHIRTVADAVKFRKLLKSHYFSQAFNIC*
Ga0126334_1017959013300010295Marine Gutless WormsAFSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNIR*
Ga0126334_1026485213300010295Marine Gutless WormsATWNALPDNIRTVADPVKFRKLLKSLYFSQAFNI*
Ga0126334_1028759013300010295Marine Gutless WormsHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNIC*
Ga0126334_1031222923300010295Marine Gutless WormsAWNALPDHIRTVADPVKFRKLLKSQYFSQAFNIC*
Ga0126334_1035190413300010295Marine Gutless WormsSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSRAFNIR*
Ga0126334_1035571723300010295Marine Gutless WormsPATWNALPDHIRTVADPVKFQKLLKSHYFSQACNIC*
Ga0126334_1037040113300010295Marine Gutless WormsATWNALPDNVRTVADPVKFRKLLKSLYFSQAFNIC*
Ga0126334_1039970713300010295Marine Gutless WormsSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFSQAFNIC*
Ga0126334_1040556533300010295Marine Gutless WormsSHAGPATWNALPDHIRTVADPVKFRKLLKSLYFSQAFNIC*
Ga0126325_1002288633300010298Marine Gutless WormsMIASGERAFSRAGPATWNALPDHIRTVADPVKFRKLLKSLYFSQAFNIR*
Ga0126325_1004985423300010298Marine Gutless WormsSHAGPATWNALPDHIRTVADPVKFRKLLKSLYFSQAFNTC*
Ga0126325_1005314443300010298Marine Gutless WormsATWNALPDNIRTMADPVKFRKLLKSLYFSQAFNI*
Ga0126325_1010741113300010298Marine Gutless WormsSHAGRPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNIC*
Ga0126325_1014610413300010298Marine Gutless WormsAFSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNI*
Ga0126325_1022153813300010298Marine Gutless WormsRAFSHAGPATWNALPDHIRTVADPVKFRKLLKSHCFSQASNIR*
Ga0126325_1022633413300010298Marine Gutless WormsAFSHAGPATWNALPDHIRTVADPVKFRKLLKSLYFSQAFNIS*
Ga0126325_1029001113300010298Marine Gutless WormsERAFSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSRAFNIW*
Ga0126325_1033720513300010298Marine Gutless WormsGERAFSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFSQGFNIC*
Ga0126325_1036153113300010298Marine Gutless WormsHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSHAFNIW*
Ga0126325_1039474313300010298Marine Gutless WormsATWNALPDHIRTVADPVKFRKLLKSHCFSQAFNTR*
Ga0126325_1039697713300010298Marine Gutless WormsAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQASNIC*
Ga0126325_1044186213300010298Marine Gutless WormsPATWNARPDHIRTVADPVKFRKKLLKSHYFTQVFNIC*
Ga0126331_102316513300010314Marine Gutless WormsFSRAGPATWNALPDHIRTVADPVKFRKLLKSLYFSQAFNIC*
Ga0126331_103210033300010314Marine Gutless WormsTWNALLDHIRTVADPVKFQKLLKSHYFCQAFNIC*
Ga0126331_105369813300010314Marine Gutless WormsAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNI*
Ga0126331_112439013300010314Marine Gutless WormsFSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSEAFNIC*
Ga0126331_128619513300010314Marine Gutless WormsPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFDIG*
Ga0126331_134080613300010314Marine Gutless WormsAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNTC*
Ga0126331_134749213300010314Marine Gutless WormsTWNALPDHIRTVADPVKFRKLLKSLYFSQAFNIC*
Ga0136654_104805013300010315Marine Gutless WormsSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNI*
Ga0136654_104955113300010315Marine Gutless WormsFSHAGPATWNALPDHIHTVADPVKFRKLLKSHYFSQAFNIC*
Ga0136654_110599023300010315Marine Gutless WormsGPATWNALPDHIRTVADPVKFRKLLKSHYFSEAFNTC*
Ga0136654_111206313300010315Marine Gutless WormsRAFSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNIR*
Ga0136654_111697613300010315Marine Gutless WormsHAGPATWNALPDHIRTVADPVKFRKLLKSIYFSQAFNI*
Ga0136654_119173923300010315Marine Gutless WormsFGERAFSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFSQSFNIC*
Ga0136654_120950223300010315Marine Gutless WormsASPATWNALPDNIRTVADPVKFRKLLKSLCFSQAFNI*
Ga0136654_128742313300010315Marine Gutless WormsGPATWNALPDHIRTVADPVKFRKLLKSLYFSQAFITC*
Ga0136654_134948613300010315Marine Gutless WormsGPATWNALPDHICTVADPVKFRKLLKSHYFSQAFDIC*
Ga0136654_135565713300010315Marine Gutless WormsTWNALPDHIRTVADPVKFQKLLKSLYFGQAFNIC*
Ga0136654_136912913300010315Marine Gutless WormsAFSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNTC*
Ga0126328_1003054313300010377Marine Gutless WormsKFGERAFSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFS*
Ga0126328_1020579923300010377Marine Gutless WormsFGERAFSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNIC*
Ga0126328_1042389913300010377Marine Gutless WormsRAFSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFITC*
Ga0126330_1000792513300010378Marine Gutless WormsSHAGPATWNALPDHIRTVADPVKFRKLLKSYYFSEAFNIC*
Ga0126330_1002099133300010378Marine Gutless WormsFGERAFSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFSLAFNIC*
Ga0126330_1011859333300010378Marine Gutless WormsRAFSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNRPIC*
Ga0126330_1019873513300010378Marine Gutless WormsSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNIR*
Ga0126330_1020181623300010378Marine Gutless WormsHGCTHAGLATWNALPDHIRTVADPVQFQKLLKSRYFSQVFNSC*
Ga0126330_1022375113300010378Marine Gutless WormsAFSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFSQVFNIC*
Ga0126330_1024757913300010378Marine Gutless WormsHAGPATWNALPDHIRTVADPVKFRKLLKSLYFSQDF*
Ga0126330_1031431713300010378Marine Gutless WormsHAGPVTWNALSDNIRTVADPVKFRKLLKSLYFSQVFNIC*
Ga0126330_1036937713300010378Marine Gutless WormsGPATWNALPDHIRTVADPVKFRKLLKSLYFSQAFNICSFFGF*
Ga0126327_1009262323300011190Marine Gutless WormsFSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFSQAFNI*
Ga0126327_1011514023300011190Marine Gutless WormsRAFSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFSQAFKF*
Ga0126327_1016768623300011190Marine Gutless WormsATWNALPDNIRTVADPVKFRKLLESLYFSQAFNIC*
Ga0126327_1017362923300011190Marine Gutless WormsAFSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNNG*
Ga0126327_1017943813300011190Marine Gutless WormsTWNALPDNIRTVADPVKFQKLLKSLYFGQAFNIC*
Ga0126327_1019253323300011190Marine Gutless WormsGPATWNALPDHIRTVADPVKFRKLLKSRYFSQAFNIC*
Ga0126327_1019990113300011190Marine Gutless WormsPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNVC*
Ga0126327_1024231813300011190Marine Gutless WormsSHAGPATWKALPDHIRTVADPVKFRKLLKSHYFSQAFNIC*
Ga0126327_1025423213300011190Marine Gutless WormsFSHAGPATWNTLPDHIRTVADPVKFRKLLKSLYFSQAFNI*
Ga0126327_1027453813300011190Marine Gutless WormsFSHAGPATWNALPDHIRTVTDPVKFRKLLKSHYFSQAFNIC*
Ga0126327_1027489713300011190Marine Gutless WormsAGPVTWNALPDHIRTVADPVKFRKLLKSHNFSQAFNTC*
Ga0126327_1029136613300011190Marine Gutless WormsSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSGAFNIC*
Ga0126327_1031497813300011190Marine Gutless WormsTWNALPDHIRTVANPVKFRKLLKSHYFSQAFNIC*
Ga0126327_1032687813300011190Marine Gutless WormsERAFSHAGPATWNALPDHIRTVTDPVKFRKLLKSHYFIQAFNIC*
Ga0126327_1041730713300011190Marine Gutless WormsFSHAGPATWNALSDHIRTVADPVKFRKLLKSLYFSQAFNIC*
Ga0126329_1000481633300012273Marine Gutless WormsHADPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFDT*
Ga0126329_1003060723300012273Marine Gutless WormsMRAFSHAGPATWNALPDHIRTVADPVKFRKLLKSLYFSQAF
Ga0126329_1008785113300012273Marine Gutless WormsAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQVFNIC*
Ga0126329_1010825813300012273Marine Gutless WormsFGERTFSHAGPATWNALPDHIRTVADPVKFRKLLKSHYFSQAFNIC*
Ga0126329_1010993013300012273Marine Gutless WormsSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFSQAFNIR*
Ga0126329_1012854823300012273Marine Gutless WormsATWNALPDNIRTVADPVKFRKLLKSLYFSQAFNSC*
Ga0126329_1016383113300012273Marine Gutless WormsAFSHAGPATWYALPDHIRTVADPVKFPKLLKSHYFSQAFNTC*
Ga0126329_1017278713300012273Marine Gutless WormsRAFSHAGPATWNALPDHIRTVADPVKFRKLLKSLYFSQAFIIC*
Ga0126329_1024616213300012273Marine Gutless WormsHAGPATWNALPDNIRTVADPVKFRKLLKSLYFSQAFNIC*
Ga0126329_1026972123300012273Marine Gutless WormsERAFSHAGPATWNALPDNIRTVADPVKFRKLLKSLYFSQACNI*
Ga0126329_1030021613300012273Marine Gutless WormsHAGPATWNALPDHIRTVADPVKFRKLLKSHYFTQAFNIC*
Ga0126329_1030945613300012273Marine Gutless WormsMRGPATWNALPDHIRTVADPVQFRKLLKSHYFSQAFN
Ga0126329_1036424113300012273Marine Gutless WormsRAFSHVGHATWNALPDNIRTVADPVKFRKLLKSLCFNQAFNIC*
Ga0126329_1041488613300012273Marine Gutless WormsGPATWNALPDHIRTVADPVKFRKLLKSHYFSRAFNIR*
Ga0126335_107601613300012887Marine Gutless WormsAGPATWNALPDHIRTVADPVKFRKLLKSHFFSQAFNIC*
Ga0209637_103862413300027584Marine Gutless Worms SymbiontAGPSTWNALPDNIRTVADPVKFRKLLKSYYFTRAYDVH


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