Metagenome / Metatranscriptome Family F060922

Basic Information
Family ID	F060922
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	46 residues
Representative Sequence	DERKWRNVSKIIPGDWGKVGSGWLVQPLLNRIARCGSGGRIHQFL
Number of Associated Samples	101
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	93.94 %
% of genes from short scaffolds (< 2000 bps)	96.97 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water (25.758 % of family members)
Environment Ontology (ENVO)	Unclassified (25.758 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (28.030 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.18% β-sheet: 0.00% Coil/Unstructured: 80.82%
Feature Viewer

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300001448\|JGI20219J14954_1004858	Not Available	779	Open in IMG/M
3300001448\|JGI20219J14954_1004908	Not Available	776	Open in IMG/M
3300005644\|Ga0075036_1041653	Not Available	751	Open in IMG/M
3300006426\|Ga0075037_1064876	Not Available	813	Open in IMG/M
3300006933\|Ga0081247_1013137	Not Available	781	Open in IMG/M
3300006935\|Ga0081246_1025121	Not Available	707	Open in IMG/M
3300007219\|Ga0075025_1010214	Not Available	748	Open in IMG/M
3300007219\|Ga0075025_1032297	Not Available	804	Open in IMG/M
3300009221\|Ga0103849_1021783	Not Available	822	Open in IMG/M
3300009225\|Ga0103851_1031991	Not Available	839	Open in IMG/M
3300009225\|Ga0103851_1065513	Not Available	627	Open in IMG/M
3300009225\|Ga0103851_1075326	Not Available	592	Open in IMG/M
3300009225\|Ga0103851_1075649	Not Available	591	Open in IMG/M
3300009230\|Ga0103855_10040418	Not Available	834	Open in IMG/M
3300009230\|Ga0103855_10040420	Not Available	834	Open in IMG/M
3300009235\|Ga0103857_10043859	Not Available	837	Open in IMG/M
3300009235\|Ga0103857_10044726	Not Available	831	Open in IMG/M
3300009235\|Ga0103857_10114042	Not Available	560	Open in IMG/M
3300009239\|Ga0103858_10073131	Not Available	833	Open in IMG/M
3300009243\|Ga0103860_10047072	Not Available	849	Open in IMG/M
3300009243\|Ga0103860_10047339	Not Available	847	Open in IMG/M
3300009243\|Ga0103860_10050628	Not Available	825	Open in IMG/M
3300009243\|Ga0103860_10064518	Not Available	748	Open in IMG/M
3300009243\|Ga0103860_10103370	Not Available	618	Open in IMG/M
3300009247\|Ga0103861_10024287	Not Available	843	Open in IMG/M
3300009247\|Ga0103861_10025980	Not Available	823	Open in IMG/M
3300009247\|Ga0103861_10026162	Not Available	821	Open in IMG/M
3300009247\|Ga0103861_10045046	Not Available	670	Open in IMG/M
3300009247\|Ga0103861_10070675	Not Available	567	Open in IMG/M
3300009249\|Ga0103862_1021032	Not Available	830	Open in IMG/M
3300009249\|Ga0103862_1035249	Not Available	675	Open in IMG/M
3300009254\|Ga0103867_1010889	Not Available	854	Open in IMG/M
3300009257\|Ga0103869_10068585	Not Available	836	Open in IMG/M
3300009257\|Ga0103869_10070581	Not Available	827	Open in IMG/M
3300009261\|Ga0103870_1017359	Not Available	832	Open in IMG/M
3300009352\|Ga0103865_1003542	Not Available	831	Open in IMG/M
3300009352\|Ga0103865_1003712	Not Available	815	Open in IMG/M
3300009384\|Ga0103868_1006317	Not Available	828	Open in IMG/M
3300009387\|Ga0103871_1009065	Not Available	759	Open in IMG/M
3300009580\|Ga0115596_1113497	Not Available	640	Open in IMG/M
3300009581\|Ga0115600_1002303	Not Available	814	Open in IMG/M
3300010072\|Ga0127428_111203	Not Available	805	Open in IMG/M
3300010084\|Ga0127461_1070392	Not Available	682	Open in IMG/M
3300010085\|Ga0127445_1098775	Not Available	501	Open in IMG/M
3300010088\|Ga0127476_1090734	Not Available	540	Open in IMG/M
3300010092\|Ga0127468_1078009	Not Available	758	Open in IMG/M
3300010102\|Ga0127453_1104362	Not Available	524	Open in IMG/M
3300010107\|Ga0127494_1069714	Not Available	746	Open in IMG/M
3300010110\|Ga0126316_1032382	Not Available	543	Open in IMG/M
3300010113\|Ga0127444_1050172	Not Available	758	Open in IMG/M
3300010138\|Ga0115595_1034095	Not Available	636	Open in IMG/M
3300010140\|Ga0127456_1048343	Not Available	757	Open in IMG/M
3300010895\|Ga0138113_172490	Not Available	664	Open in IMG/M
3300011046\|Ga0138600_156693	Not Available	505	Open in IMG/M
3300011054\|Ga0138523_1094485	Not Available	508	Open in IMG/M
3300011064\|Ga0138525_1053728	Not Available	512	Open in IMG/M
3300011074\|Ga0138559_1084182	Not Available	520	Open in IMG/M
3300011079\|Ga0138569_1131596	Not Available	561	Open in IMG/M
3300011083\|Ga0138560_1132410	Not Available	755	Open in IMG/M
3300011086\|Ga0138564_1196205	Not Available	788	Open in IMG/M
3300011282\|Ga0138293_123832	Not Available	513	Open in IMG/M
3300011340\|Ga0151652_10195366	Not Available	519	Open in IMG/M
3300011340\|Ga0151652_10372448	Not Available	512	Open in IMG/M
3300011340\|Ga0151652_12613495	Not Available	823	Open in IMG/M
3300011340\|Ga0151652_12692181	Not Available	523	Open in IMG/M
3300011340\|Ga0151652_14051188	Not Available	749	Open in IMG/M
3300012386\|Ga0134046_1150973	Not Available	738	Open in IMG/M
3300012388\|Ga0134031_1050506	Not Available	730	Open in IMG/M
3300012399\|Ga0134061_1219795	Not Available	561	Open in IMG/M
3300012469\|Ga0150984_109287665	Not Available	708	Open in IMG/M
3300012754\|Ga0138278_1056918	Not Available	810	Open in IMG/M
3300012768\|Ga0138276_1165656	Not Available	808	Open in IMG/M
3300012776\|Ga0138275_1063316	Not Available	579	Open in IMG/M
3300019199\|Ga0187789_1134853	Not Available	500	Open in IMG/M
3300019199\|Ga0187789_1293183	Not Available	520	Open in IMG/M
3300019211\|Ga0187799_1237320	Not Available	699	Open in IMG/M
3300019232\|Ga0180114_1360343	Not Available	697	Open in IMG/M
3300019234\|Ga0172288_1407156	Not Available	575	Open in IMG/M
3300019241\|Ga0187793_1006753	Not Available	718	Open in IMG/M
3300019241\|Ga0187793_1066215	Not Available	778	Open in IMG/M
3300019245\|Ga0187791_1135352	Not Available	700	Open in IMG/M
3300019245\|Ga0187791_1357206	Not Available	694	Open in IMG/M
3300019245\|Ga0187791_1390928	Not Available	771	Open in IMG/M
3300019245\|Ga0187791_1483738	Not Available	705	Open in IMG/M
3300019249\|Ga0184648_1145510	Not Available	704	Open in IMG/M
3300019252\|Ga0172286_1545906	Not Available	709	Open in IMG/M
3300019254\|Ga0184641_1006753	Not Available	764	Open in IMG/M
3300019265\|Ga0187792_1140630	Not Available	527	Open in IMG/M
3300019273\|Ga0187794_1052228	Not Available	730	Open in IMG/M
3300019273\|Ga0187794_1767669	Not Available	649	Open in IMG/M
3300020068\|Ga0184649_1288111	Not Available	729	Open in IMG/M
3300020078\|Ga0206352_11025047	Not Available	812	Open in IMG/M
3300020080\|Ga0206350_11426988	Not Available	803	Open in IMG/M
3300020081\|Ga0206354_10180435	Not Available	513	Open in IMG/M
3300021286\|Ga0179583_1004214	Not Available	785	Open in IMG/M
3300021329\|Ga0210362_1353017	Not Available	811	Open in IMG/M
3300021856\|Ga0213850_1232146	Not Available	543	Open in IMG/M
3300021858\|Ga0213852_1149228	Not Available	674	Open in IMG/M
3300022154\|Ga0213929_1034943	Not Available	517	Open in IMG/M
3300022161\|Ga0213931_1040253	Not Available	562	Open in IMG/M
3300030546\|Ga0247646_1177910	Not Available	596	Open in IMG/M
3300030830\|Ga0308205_1065505	Not Available	505	Open in IMG/M
3300030831\|Ga0308152_103213	Not Available	831	Open in IMG/M
3300030902\|Ga0308202_1161264	Not Available	505	Open in IMG/M
3300030903\|Ga0308206_1192892	Not Available	513	Open in IMG/M
3300030904\|Ga0308198_1027380	Not Available	797	Open in IMG/M
3300030905\|Ga0308200_1049028	Not Available	785	Open in IMG/M
3300030905\|Ga0308200_1148435	Not Available	540	Open in IMG/M
3300030923\|Ga0138296_1392120	Not Available	528	Open in IMG/M
3300030939\|Ga0138303_1167086	Not Available	663	Open in IMG/M
3300031022\|Ga0138301_1186093	Not Available	579	Open in IMG/M
3300031058\|Ga0308189_10143663	Not Available	811	Open in IMG/M
3300031081\|Ga0308185_1030439	Not Available	651	Open in IMG/M
3300031082\|Ga0308192_1038965	Not Available	683	Open in IMG/M
3300031093\|Ga0308197_10477888	Not Available	506	Open in IMG/M
3300031096\|Ga0308193_1026685	Not Available	775	Open in IMG/M
3300031125\|Ga0308182_1006948	Not Available	814	Open in IMG/M
3300031422\|Ga0308186_1010956	Not Available	789	Open in IMG/M
3300031505\|Ga0308150_1026232	Not Available	634	Open in IMG/M
3300031524\|Ga0302320_11612986	Not Available	630	Open in IMG/M
3300034447\|Ga0370544_22767	Not Available	515	Open in IMG/M
3300034480\|Ga0314789_009096	Not Available	794	Open in IMG/M
3300034644\|Ga0370548_038977	Not Available	809	Open in IMG/M
3300034659\|Ga0314780_080654	Not Available	710	Open in IMG/M
3300034662\|Ga0314783_056725	Not Available	750	Open in IMG/M
3300034673\|Ga0314798_045911	Not Available	805	Open in IMG/M
3300034680\|Ga0370541_016697	Not Available	795	Open in IMG/M
3300034681\|Ga0370546_032985	Not Available	744	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.24%
Host-Associated	Host-Associated	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.52%
Aquatic	Environmental → Aquatic	47.73%
Plants	Host-Associated → Plants	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.76%
Freshwater	Environmental → Aquatic → Freshwater	46.97%
Marine	Environmental → Aquatic → Marine	0.76%
Peat	Environmental → Terrestrial → Peat	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.15%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	25.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	11.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.30%
Lake	Environmental → Aquatic → Freshwater → Lake	2.27%
Creek	Environmental → Aquatic → Freshwater → Creek	1.52%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.58%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	25.76%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	11.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.09%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.03%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.03%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	1.52%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.52%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.76%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	25.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.85%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	9.09%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	5.30%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.30%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	4.55%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	3.79%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.03%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	1.52%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.52%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.52%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.76%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001448	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk Metatranscriptome	Environmental	Open in IMG/M
3300005644	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_053 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006426	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_054 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006933	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A100I (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300006935	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007219	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaT_SC_2013 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009221	Microbial communities of water from Amazon river, Brazil - RCM2	Environmental	Open in IMG/M
3300009225	Microbial communities of water from Amazon river, Brazil - RCM4	Environmental	Open in IMG/M
3300009230	Microbial communities of water from Amazon river, Brazil - RCM8	Environmental	Open in IMG/M
3300009233	Microbial communities of water from Amazon river, Brazil - RCM9	Environmental	Open in IMG/M
3300009235	Microbial communities of water from Amazon river, Brazil - RCM10	Environmental	Open in IMG/M
3300009239	Microbial communities of water from Amazon river, Brazil - RCM11	Environmental	Open in IMG/M
3300009243	Microbial communities of water from Amazon river, Brazil - RCM13	Environmental	Open in IMG/M
3300009247	Microbial communities of water from Amazon river, Brazil - RCM14	Environmental	Open in IMG/M
3300009249	Microbial communities of water from Amazon river, Brazil - RCM15	Environmental	Open in IMG/M
3300009252	Microbial communities of water from Amazon river, Brazil - RCM16	Environmental	Open in IMG/M
3300009254	Microbial communities of water from Amazon river, Brazil - RCM20	Environmental	Open in IMG/M
3300009257	Microbial communities of water from Amazon river, Brazil - RCM22	Environmental	Open in IMG/M
3300009261	Microbial communities of water from Amazon river, Brazil - RCM23	Environmental	Open in IMG/M
3300009352	Microbial communities of water from Amazon river, Brazil - RCM18	Environmental	Open in IMG/M
3300009384	Microbial communities of water from Amazon river, Brazil - RCM21	Environmental	Open in IMG/M
3300009387	Microbial communities of water from Amazon river, Brazil - RCM24	Environmental	Open in IMG/M
3300009580	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009581	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_9_15_A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009586	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_11_14_A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010072	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010084	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010085	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010088	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010092	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010102	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010107	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010110	Soil microbial communities from Illinois, USA to study soil gas exchange rates - BV-IL-AGR metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010113	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010138	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010140	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010895	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011046	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 68 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011054	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 1 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011064	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 2 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011074	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 40 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011079	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 54 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011083	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 45 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011086	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 49 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011282	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaT_SC_2012 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012388	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012754	Freshwater microbial communities from Lake Montjoie, Canada - M_130821_M_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012768	Freshwater microbial communities from Lake Montjoie, Canada - M_130710_M_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012776	Freshwater microbial communities from Lake Montjoie, Canada - M_130207_X_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019199	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019211	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019232	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019234	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019241	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019245	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019252	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019265	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019273	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020068	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021286	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021329	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.625 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021856	Metatranscriptome of freshwater microbial communities from post-fracked creek in Pennsylvania, United States - LL:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022154	Metatranscriptome of freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 1-17 MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022161	Metatranscriptome of freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 3-17 MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030546	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb11 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030831	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_141 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030939	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031081	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031082	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031125	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031422	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031505	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_139 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300034447	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_119 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034480	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20219J14954_10048581	3300001448	Wetland	DVSGIIPGDWGKVGSGWLVQPLSNRIARFGGGGRIHQFL*
JGI20219J14954_10049081	3300001448	Wetland	NGDAGWNESARPDVSGIIPGDWGKVEPGWLVQPLSSRIARDGGGGRIHQFL*
Ga0075036_10416532	3300005644	Permafrost Soil	QEVTDERKWLKVSKIIPGDWGMVGSGWLVQPLLNRTARCGGGGRIHQFL*
Ga0075037_10648762	3300006426	Permafrost Soil	PRQEVTDERKWLKVSKIIPGDWGMVGSGWLVQPLLNRTARCGGGGRIHQFL*
Ga0081247_10131371	3300006933	Tropical Rainforest Soil	VSRIIPGDWGKVESGWLVQPLARPEAKVMAGGRIHQFL*
Ga0081246_10251211	3300006935	Tropical Rainforest Soil	SRIIPGDWGKVESGWLVQPLARPEAKVMAGGRIHQFL*
Ga0075025_10102141	3300007219	Watersheds	NVSKIIPGDWGKVAAGWLRQPLSNRIARCGGGGRIHQFLWPVRAGQ*
Ga0075025_10322972	3300007219	Watersheds	DERKWRNVSKIIPGDWGKVGSGWLVQPLSNRIARCGSGGRIHQFL*
Ga0103849_10217831	3300009221	River Water	ERILKNVSKIIPGDWGMVGPGWLAQPLSNRIARCGGGGRIHQFL*
Ga0103851_10319911	3300009225	River Water	AVDERTLKNVSRIIPGDWGTVGPGWLAQPLSSWIERSGSGGRIHQFL*
Ga0103851_10655132	3300009225	River Water	VDERRSLVVSRIIPGNWGKVEPGWLVQPLLNRIARSGSGGRIHQFL*
Ga0103851_10753261	3300009225	River Water	VKLTQNVSRIIPGDWGKVGSGWLVQPLSNRAARCGGGGKIHQFL*
Ga0103851_10756491	3300009225	River Water	KLAQNVSRIIPGDWGKVRSGWLVQPLLKRIARCGSGGRIHQFL*
Ga0103855_100404181	3300009230	River Water	AVDERTLKNVSKIIPGDWGMVGPGWLAQPLSNRIAGCGGGGRIHQFL*
Ga0103855_100404201	3300009230	River Water	AVDERTLKDVSRIIPGDWGTVGPGWLAQPLSSCIERCGGGGRIHQFL*
Ga0103856_100377791	3300009233	River Water	LLAADESLSRNVSEIIPGDWGKVGSGWLIRLLSNRGASCDGGRIHQFL*
Ga0103857_100438592	3300009235	River Water	AVDERTLKNVSRIIPGDWGTVGPSWLAQPLSSRIERSGSGGRIHQFL*
Ga0103857_100447261	3300009235	River Water	RKWLNISKIIPGDWGKVESGWLVQPLLNRTARCGSGGRIHQFL*
Ga0103857_101140421	3300009235	River Water	IIPGDWGKVESGWLVQLLKNRIARSGGGGRIHQFL*
Ga0103858_100731311	3300009239	River Water	ERILKNVSKIIPGDWGMVGPGWLAQPLSNRIAGCGGGGRIHQFL*
Ga0103860_100470721	3300009243	River Water	PRWLAVDERTLKNVSKIIPGDWGMVGPGWLAQPLSNRIAGCGGGGRIHQFL*
Ga0103860_100471871	3300009243	River Water	FGWRWIIPSQNVSEIIPGDWGKVGPGWSVQPLASRIARCGGGRIHQFL*
Ga0103860_100473391	3300009243	River Water	WCKVKLTQNVSRIIPGDWGKVGSGWLVQPLSNRAARRGGGGRIHQFL*
Ga0103860_100506281	3300009243	River Water	DERKWRNVSKIIPGDWGKVGSGWLVQPLLKRIARSGSGGRIHQFL*
Ga0103860_100645181	3300009243	River Water	VTVNRLKLVVSKIIPGDWGKVGPGWLAQLLSQRVERFAVGGRIHQFL*
Ga0103860_101033701	3300009243	River Water	PRWLAVDERTLKNVSKIIPGDWGMVGPGWLAQPLSNRIAGCGSGGRIHQFL*
Ga0103861_100242871	3300009247	River Water	DERTLKNVSKIIPGDWGMVGPGWLAQPLSNRIAGCGGGGRIHQFL*
Ga0103861_100259801	3300009247	River Water	ERKWLNISKIIPGDWGKVESGWLVQPLLNRIARCGSGGRIHQFL*
Ga0103861_100261621	3300009247	River Water	DERTLKNVSRIIPGDWGKVGLGWLAQPLLKRTAGCGRGRIHQFL*
Ga0103861_100450461	3300009247	River Water	RWLAVDERILKNVSKIIPGDWGMVGPGWLAQPLSNRIAGCGGGGRIHQFL*
Ga0103861_100706751	3300009247	River Water	VKLTQNVSRIIPGDWGKVGSGWLVQPLSNRAARRGGGGRIHQFL*
Ga0103862_10210321	3300009249	River Water	AVDERTLKNVSKIIPGDWGMVGPGWLAQPLSNRIAGCGSGGRIHQFL*
Ga0103862_10352491	3300009249	River Water	RKWRNVSKIIPGDWGKVGSGWLVQPLLKRIARSGSGGRIHQFL*
Ga0103863_100295971	3300009252	River Water	KPVQNVSEIIPGDWGKVGSGWLVQPLLSRTARCGGGGRIHQFL*
Ga0103867_10108891	3300009254	River Water	EPRWLAVDERTLKNVSKIIPGDWGMVGPGWLAQPLSNRIAGCGGGGRIHQFL*
Ga0103869_100685851	3300009257	River Water	VTDERKWRNVSKIIPGDWGKVGSGWLVQPLLKRIARFGSGGRIHQFL*
Ga0103869_100705812	3300009257	River Water	DERKWLNISKIIPGDWGKVESGWLVQPLLNRIARCGSGGRIHQFL*
Ga0103870_10173591	3300009261	River Water	VDERILKNVSKIIPGDWGMVGPGWLAQPLSNRIAGCGGGGRIHQFL*
Ga0103865_10035421	3300009352	River Water	VDERTLKNVSKIIPGDWGMVGPGWLAQPLSNRIAGCGGGGRIHQFL*
Ga0103865_10037121	3300009352	River Water	KWLNVSKIIPGDWGKVGSGWLIQPLLNRTARCGSGGRIHQFL*
Ga0103868_10063171	3300009384	River Water	ERTLKNVSKIIPGDWGMVGPGWLAQPLSNRIAGCGGGGRIHQFL*
Ga0103871_10090651	3300009387	River Water	LEVSKIIPGDWGKVGSGWLIQPLSNRIARCGGGGRIHQFL*
Ga0115596_11134971	3300009580	Wetland	RPDVSRIIPGDWGKVESGWLVQPLLNRIARCGGGGRIHQFL*
Ga0115600_10023031	3300009581	Wetland	PKWLARDESSRLDVSGIIPGDWGKVESGWLVQPLLNQIARFGGGGRIHQFL*
Ga0115591_11740631	3300009586	Wetland	VDESSPQNVSEIIPGDWGKVGSGWLVQPLSNHGASRGSGGRIHQFL*
Ga0127428_1112031	3300010072	Grasslands Soil	KETRWSVTNERMAPDISKIIPGDWGKVEPGWLVGPLWTPAETPGGGGRIHQFL*
Ga0127461_10703921	3300010084	Grasslands Soil	PNVSKIIPGDWGKAGSGWLATPLSNRAARFASGGRIHQFL*
Ga0127445_10987751	3300010085	Grasslands Soil	TDERKWRNVSKIIPGDWGKVGSGWLVQPLLNRTARCGSGGRIHQFL*
Ga0127476_10907341	3300010088	Grasslands Soil	RVEADERKPPNVSKIIPGDWGKAEPGWLARPLSSRSESSGSGGRIHQFL*
Ga0127468_10780091	3300010092	Grasslands Soil	TDERKWRNVSKIIPGDWGKVGSGWLVQPLLNRIARCGSGGRIHQFL*
Ga0127453_11043621	3300010102	Grasslands Soil	RKPPNVSKIIPGDWGKAEPGWLARPLSSRSESFGSGGRIHQFL*
Ga0127494_10697141	3300010107	Grasslands Soil	RIIPGDWGKVESGWLVQPLWTPFSRTGGGGRIHQFL*
Ga0126316_10323821	3300010110	Soil	TEVPANLAIFRIIPGDWGKVESGWLVQPLWTPFSRTGGGGRIHQFL*
Ga0127444_10501721	3300010113	Grasslands Soil	AAAVNRLTLSVSRINPGDWGKVGSGWLVQLLQERIARFGGGGRIHQFL*
Ga0115595_10340951	3300010138	Wetland	RLDVSGIIPGDWGKVESGWLVQPLLNQIARFGGGGRIHQFL*
Ga0127456_10483431	3300010140	Grasslands Soil	DERKWRNVSKIIPGDWGKVGSGWLVQPLLNRIARCGSGGRIHQFL*
Ga0138113_1724901	3300010895	Grasslands Soil	ERKWRNVSKIIPGDWGKVGSGWLVQPLLNRTARCGSGGRIHQFL*
Ga0138600_1566931	3300011046	Peatlands Soil	ELRRVVTDERKWLNVSKIIPGDWGKVGSGWLVQPLPNHAARCGGGGRIHQFL*
Ga0138523_10944851	3300011054	Peatlands Soil	PRRVVTDERKWLNVSKIIPGDWGKVGSGWLVQPLPNHAARCGGGGRIHQFL*
Ga0138525_10537281	3300011064	Peatlands Soil	VVTDERKWLNVSKIIPGDWGKVGSGWLVQPLPNHAARCGGGGRIHQFL*
Ga0138559_10841821	3300011074	Peatlands Soil	NVSRIIPGDWGKVGSGWLVQPLSNRIARCGGGGRIHQFL*
Ga0138569_11315961	3300011079	Peatlands Soil	GRTATVNKLALDFSKIIPGDWGKVGSGWLVQPLSNRIARCGGGGRIHQFL*
Ga0138560_11324101	3300011083	Peatlands Soil	PRRVVTDERKWLNVSKIIPGDWGKVGSGWLVQPLSNRIARCGGGGRIHQFL*
Ga0138564_11962051	3300011086	Peatlands Soil	RVVTDERKWLNVSRIIPGDWGKVGSGWLVQPLPNHAARCGGGGRIHQFL*
Ga0138293_1238321	3300011282	Watersheds	EVTDERKWLNVSKIIPGDWGKVGPGWLVQPLLNRIARCGSGGRIHQFL*
Ga0151652_101953661	3300011340	Wetland	ELRWSVTDERKWLDVSRIIPGYWGKVGSGWLVQPLLKRGASRGGGGRIHQFL*
Ga0151652_103724481	3300011340	Wetland	NVSKIIPGDWGKVGSGWLVQPLLNRIARFGSGGRIHQFL*
Ga0151652_126134951	3300011340	Wetland	AEEILPQNVSKIIPGDWGKVGSGWLLQPLLSRIARFGGGGRIHQFL*
Ga0151652_126921811	3300011340	Wetland	AGWNESARPDVSGIIPGDWGKVEPGWLVQPLSSRIARYGGGGRIHQFL*
Ga0151652_140511881	3300011340	Wetland	QNVSKIIPGDWGKVAAGWLRQPLSNRIARCGGGGRIHQFLWPVRAGQ*
Ga0134046_11509731	3300012386	Grasslands Soil	EADERKPPNVSKIIPGDWGKAESGWLAQPLWNRIEGLEEGGSIHQFL*
Ga0134031_10505061	3300012388	Grasslands Soil	DERKWRNVSKIIPGDWGKVGSGWLVQPLLNRTARCGSVGRIHQFL*
Ga0134061_12197951	3300012399	Grasslands Soil	APRRVEADERKPPNVSKIIPGDWGMAESGWLARPLLSRIARFGSGGRIHQFL*
Ga0150984_1092876651	3300012469	Avena Fatua Rhizosphere	FRIIPGDWGKVESGWLVQPLWTPFSRTGGGGRIHQFL*
Ga0138278_10569181	3300012754	Freshwater Lake	PRQEVTDERKWLRVSKIIPGDWGKVESGWLVQPLLNRTARCGSGGRIHQFL*
Ga0138276_11656561	3300012768	Freshwater Lake	QEVTDERKWLRVSKIIPGDWGKVESGWLVQPLLNRTARCGSGGRIHQFL*
Ga0138275_10633161	3300012776	Freshwater Lake	PRQEVTDERKWLRVSKIIPGDWGKVESGWLVQPLLNRTARCGSGGRIHRFL*
Ga0187789_11348531	3300019199	Peatland	RWSAVDESSRLDVSGIIPGDWGTVGTGWLVKPLSNRIARSGGGGRIHQFL
Ga0187789_12931831	3300019199	Peatland	SRIIPGDWGKVESGWLVQPLARPEAKVMAGGRIHQFL
Ga0187799_12373201	3300019211	Peatland	TVMDERKSLVVSRIIPGDWGKVESGWLAWPLLSRTARCGSGGRIHQFL
Ga0180114_13603431	3300019232	Groundwater Sediment	QRRVEADERKPPNVSKIIPGDWGKAESGWLARPLSSPVARPGGGGSIHQFL
Ga0172288_14071561	3300019234	Wetland	PKWLARDESSRLDVSGIIPGDWGKVESGWLVQPLLNQIARFGGGGRIHQFL
Ga0187793_10067531	3300019241	Peatland	RIIPGDWGKVEPGWLVQPLSNRTARCGGGGRIHQFL
Ga0187793_10662151	3300019241	Peatland	TAADERKLPGVSRIIPGDWGKVESGWLAWPLSSRTARCGSGGRIHQFL
Ga0187791_11353521	3300019245	Peatland	VSRIIPGDWGKVESGWLAWPLSNRIARCGGGGRIHQFL
Ga0187791_13572061	3300019245	Peatland	KVKLARNVPRIIPGDWGKVGSGWLVQPLLNHIARCGTGGRIHQFL
Ga0187791_13909281	3300019245	Peatland	LDVSGIIPGDWGKVGSGWLVQPLLNRIARSGGGGRIHQFL
Ga0187791_14837381	3300019245	Peatland	VSRIIPGDWGKVESGWLVQPLARPEAKVMAGGRIHQFL
Ga0184648_11455101	3300019249	Groundwater Sediment	REVTDERKWRNVSKIIPGDWGKVGSGWLIQPLSNRIARCGSGGRIHQFL
Ga0172286_15459061	3300019252	Wetland	RLDVSGIIPGDWGKVESGWLVQPLSNRVARCGGGGRIHQFL
Ga0184641_10067531	3300019254	Groundwater Sediment	LRWSVTDERMKLDVSRIIPGDWGKVGSGWLVQLLLNQIARSDGGGRIHQFL
Ga0187792_11406301	3300019265	Peatland	VGESSRLDVSGIIPGDWGKVGSGWLVQPLLNRIARSGGGGRIHQFL
Ga0187794_10522282	3300019273	Peatland	SRIIPGDWGKVESGWLVQPLLNRTARCGSGGRIHQFL
Ga0187794_17676691	3300019273	Peatland	AAVIERLRPNVSRIIPGDWGKVGPGWLVQLLLNQIARFGSGGRIHQFL
Ga0184649_12881111	3300020068	Groundwater Sediment	VTDERKWRNVSKIIPGDWGKVGSGWLIQPLSNRIARCGSGGRIHQFL
Ga0206352_110250471	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	EPRREVTDERKCPNVSKIIPGDWGKVGSGWLIQPLSNRTARFGSGGRIHQFL
Ga0206350_114269881	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	LTDERKWRNVSKIIPGDWGKVGSGWLVQPLLNRTARCGSGGRIHQFL
Ga0206354_101804351	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	PRREVTDERKWRNVSKIIPGDWGKVGSGWLIQPLLKRTARFGSGGSIHQFL
Ga0179583_10042141	3300021286	Vadose Zone Soil	EPGRKVTDERKWLKVSKIIPGDWGKVRSGWLIEPLLKRTARFGSGGRIHQFL
Ga0210362_13530171	3300021329	Estuarine	QRWLVVDESLPQNVSKIIPGDWGKVGSGWLVQPLLNRIARCGSGGRIHQFL
Ga0213850_12321461	3300021856	Watersheds	EQRWLAADENLSQNVLKIIPGDWGKVGSGWLVQPLLNRIARFGSGGRIHQFL
Ga0213852_11492281	3300021858	Watersheds	IIPGDWGKVGSGWLVQPLSNRIARFGGGGRIHQFL
Ga0213929_10349432	3300022154	Freshwater	EPRRKVTDERKWLKVSKIIPGDWGKVRSGWLIEPLLNRAARFGSGGRIHQFL
Ga0213931_10402531	3300022161	Freshwater	LRWLVADEGLSQNVSEIIPGDWGKVGSGWLVQPLSNCGASCSSGGRIHQFL
Ga0247646_11779101	3300030546	Soil	REVTDERKWRNVSKIIPGDWGKVGSGWLVQPLLNRTARCGSGGRIHQFL
Ga0308205_10655052	3300030830	Soil	LRWSVTDERMKLDVSRIIPGDWGKVGSGWLVQLLLNPIARWDSGGRIHQFL
Ga0308152_1032131	3300030831	Soil	LRWSVTDERMKLDVSRIIPGDWGKVGSGWLVQLLLNPISRLDSGGRIHQFL
Ga0308202_11612641	3300030902	Soil	REVTDERKCPNVSKIIPGDWGKVGSGWLVQPLSNRTARFGSGGRIHQFL
Ga0308206_11928921	3300030903	Soil	REVTDERKWRNVSKIIPGDWGKVGSGWLIQPLLNRTARCGSGGRIHQFL
Ga0308198_10273801	3300030904	Soil	LRWSVTDERMKLDVSRIIPGDWGKVGSGWLVQLLLNPIARLDSGGRIHQFL
Ga0308200_10490281	3300030905	Soil	LRWSVTDERMKLDVSRIIPGDWGKVGSGWLVQLLLNQIARSDVGGRIHQFL
Ga0308200_11484351	3300030905	Soil	PRRKVTDERKCPNVSKIIPGDWGKVGSGWLVQPLPNQAARFGSGGRIHQFL
Ga0138296_13921201	3300030923	Soil	REVTDERKWPNVLKIIPGDWGKVGSGWLVQPLLNRIARCGSGGRIHQFL
Ga0138303_11670861	3300030939	Soil	RREVTDERKWRNVSKIIPGDWGKVGSGWLVQPLLNRIARCGSGGRIHQFL
Ga0138301_11860932	3300031022	Soil	KIIPGDWGKVGSGWLVQPLLNRIARYGSGGRIHQFL
Ga0308189_101436631	3300031058	Soil	RREVTDERKWRNVSKIIPGDWGKVGSGWLIQPLLNRTARCGSGGRIHQFL
Ga0308185_10304391	3300031081	Soil	LRWSVTDERMKLYVSRIIPGDWGKVGSGWLVQLLLNPIARLDRGGRIHQFL
Ga0308192_10389651	3300031082	Soil	NVSKIIPGDWGKVGSGWLVQPLSNQAARFGSGGRIHQFL
Ga0308197_104778881	3300031093	Soil	VTDERMKLDVSWIIPGDWGKVGSGWLVQLLLNQIARSDVGGRIHQFL
Ga0308193_10266851	3300031096	Soil	VTDERMKLDVSRIIPGDWGKVGSGWLVQLLLNPIARWDGGGRIHQFL
Ga0308182_10069481	3300031125	Soil	LRWSVTDERMKLDVSRIIPGDWGKVGSGWLVQLLLNPIARLDRGGRIHQFL
Ga0308186_10109561	3300031422	Soil	VTDERMKLDVSRIIPGDWGKVGSGWLVQLLLNQIARSDGGGRIHQFL
Ga0308150_10262321	3300031505	Soil	VTDERMKLGVSRIIPGDWGKVGSGWLVQLLLNSIARLDSGGRIHQFL
Ga0302320_116129861	3300031524	Bog	MPVADARKLRVLRRIIPGNWGKVESGWLVQPLLTRSARSGSGGIIHQFLCRRSRAVS
Ga0370544_22767_359_487	3300034447	Soil	MKLDVSRIIPGDWGKVGSGWLVQLLLNQIARSDGGGRIHQFL
Ga0314789_009096_1_150	3300034480	Soil	REVTDERKWRNVSKIIPGDWGKVGSGWLVQPLLKRIARSGSGGRIHQFL
Ga0370548_038977_32_160	3300034644	Soil	MKLDVSRIIPGDWGKVGSGWLVQLLLNQIARSGGGGRIHQFL
Ga0314780_080654_3_152	3300034659	Soil	REVTDERKWRNVSKIIPGDWGKVGSGWLVQPLLNCAAGCGSGGRIHQFL
Ga0314783_056725_1_138	3300034662	Soil	EVPVNLAIFRIIPGDWGKVESGWLVQPLWTPFSRTGGGGRIHQFL
Ga0314798_045911_1_150	3300034673	Soil	REVTDERKWRNVSKIIPGDWGKVGSGWLVQPLLKRTARCDSGGRIHQFL
Ga0370541_016697_648_776	3300034680	Soil	MKLDVSRIIPGDWGKVGSGWLVQLLLNPIARWDSGGRIHQFL
Ga0370546_032985_30_158	3300034681	Soil	MKLDVSRIIPGDWGKVGSGWLVQLLLNPIARLDSGGRIHQFL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F060922

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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