Metagenome / Metatranscriptome Family F061140

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061140
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	49 residues
Representative Sequence	MHVNDVFDIIGGILTIALVAVFLTKPNTASDVNAAGGQFTGALKQAEAG
Number of Associated Samples	101
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.12 %
% of genes near scaffold ends (potentially truncated)	12.88 %
% of genes from short scaffolds (< 2000 bps)	59.09 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (49.242 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (15.152 % of family members)
Environment Ontology (ENVO)	Unclassified (23.485 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 54.55% β-sheet: 0.00% Coil/Unstructured: 45.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00041	fn3	7.63
PF01476	LysM	3.82
PF11195	DUF2829	2.29
PF00534	Glycos_transf_1	2.29
PF00877	NLPC_P60	2.29
PF13481	AAA_25	1.53
PF03793	PASTA	0.76
PF08774	VRR_NUC	0.76
PF05345	He_PIG	0.76
PF00589	Phage_integrase	0.76
PF13495	Phage_int_SAM_4	0.76
PF01183	Glyco_hydro_25	0.76
PF13692	Glyco_trans_1_4	0.76
PF09458	H_lectin	0.76
PF04191	PEMT	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	2.29
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.55 %
Unclassified	root	N/A	45.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	49.24 %
Unclassified	root	N/A	45.45 %
Viruses	superkingdom	All Organisms → Viruses	5.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.24 %
Unclassified	root	N/A	45.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	31.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	31.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	31.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	31.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	31.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	31.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Rugosimonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.45 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	31.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.30 %
Rugosimonospora africana	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora → Rugosimonospora africana	1.52 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000651\|AP72_2010_repI_A10DRAFT_1005948	All Organisms → Viruses → Predicted Viral	1640	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1069346	Not Available	555	Open in IMG/M
3300002910\|JGI25615J43890_1001764	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3007	Open in IMG/M
3300003322\|rootL2_10349116	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2038	Open in IMG/M
3300003323\|rootH1_10094314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18123	Open in IMG/M
3300004457\|Ga0066224_1148747	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	737	Open in IMG/M
3300005434\|Ga0070709_10002441	All Organisms → cellular organisms → Bacteria	10068	Open in IMG/M
3300005434\|Ga0070709_10050946	Not Available	2596	Open in IMG/M
3300005435\|Ga0070714_100001053	All Organisms → cellular organisms → Bacteria	19689	Open in IMG/M
3300005435\|Ga0070714_100001121	All Organisms → cellular organisms → Bacteria	19250	Open in IMG/M
3300005435\|Ga0070714_100002557	All Organisms → cellular organisms → Bacteria	13397	Open in IMG/M
3300005435\|Ga0070714_100021833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	5241	Open in IMG/M
3300005435\|Ga0070714_100404699	Not Available	1291	Open in IMG/M
3300005436\|Ga0070713_100022511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	4871	Open in IMG/M
3300005436\|Ga0070713_100040884	All Organisms → Viruses → Predicted Viral	3773	Open in IMG/M
3300005436\|Ga0070713_100105222	Not Available	2451	Open in IMG/M
3300005436\|Ga0070713_100527538	Not Available	1116	Open in IMG/M
3300005436\|Ga0070713_102038552	Not Available	556	Open in IMG/M
3300005437\|Ga0070710_10061813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2134	Open in IMG/M
3300005444\|Ga0070694_100339199	Not Available	1161	Open in IMG/M
3300005458\|Ga0070681_10225175	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1790	Open in IMG/M
3300005529\|Ga0070741_10008095	All Organisms → cellular organisms → Bacteria	21299	Open in IMG/M
3300005529\|Ga0070741_10014945	All Organisms → cellular organisms → Bacteria	13299	Open in IMG/M
3300005530\|Ga0070679_100342386	Not Available	1443	Open in IMG/M
3300005534\|Ga0070735_10112118	All Organisms → Viruses → Predicted Viral	1709	Open in IMG/M
3300005535\|Ga0070684_100181230	Not Available	1915	Open in IMG/M
3300005537\|Ga0070730_10287280	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1079	Open in IMG/M
3300005538\|Ga0070731_10329884	All Organisms → Viruses → Predicted Viral	1013	Open in IMG/M
3300005545\|Ga0070695_101493307	Not Available	562	Open in IMG/M
3300005563\|Ga0068855_100007384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13306	Open in IMG/M
3300005569\|Ga0066705_10020283	Not Available	3411	Open in IMG/M
3300005614\|Ga0068856_100002300	All Organisms → cellular organisms → Bacteria	19701	Open in IMG/M
3300005614\|Ga0068856_100557397	Not Available	1167	Open in IMG/M
3300005712\|Ga0070764_10863130	Not Available	565	Open in IMG/M
3300006052\|Ga0075029_100329172	Not Available	980	Open in IMG/M
3300006175\|Ga0070712_100069109	All Organisms → Viruses → Predicted Viral	2519	Open in IMG/M
3300006175\|Ga0070712_101009314	Not Available	720	Open in IMG/M
3300009012\|Ga0066710_100403913	Not Available	2037	Open in IMG/M
3300009137\|Ga0066709_100093946	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3643	Open in IMG/M
3300009525\|Ga0116220_10021582	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2601	Open in IMG/M
3300009698\|Ga0116216_10362965	Not Available	880	Open in IMG/M
3300009808\|Ga0105071_1017268	Not Available	1006	Open in IMG/M
3300010048\|Ga0126373_10774666	Not Available	1020	Open in IMG/M
3300010048\|Ga0126373_11369237	Not Available	773	Open in IMG/M
3300010048\|Ga0126373_12207452	Not Available	612	Open in IMG/M
3300010373\|Ga0134128_10094628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3398	Open in IMG/M
3300010379\|Ga0136449_103592515	Not Available	588	Open in IMG/M
3300010869\|Ga0126359_1047267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora → Rugosimonospora africana	3363	Open in IMG/M
3300011070\|Ga0138567_1061302	Not Available	565	Open in IMG/M
3300011332\|Ga0126317_10284536	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3797	Open in IMG/M
3300012206\|Ga0137380_10003171	All Organisms → cellular organisms → Bacteria	14268	Open in IMG/M
3300012209\|Ga0137379_10002303	All Organisms → cellular organisms → Bacteria	17714	Open in IMG/M
3300012353\|Ga0137367_11161310	Not Available	518	Open in IMG/M
3300013296\|Ga0157374_10158478	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2204	Open in IMG/M
3300017959\|Ga0187779_10035713	All Organisms → Viruses → Predicted Viral	2872	Open in IMG/M
3300017961\|Ga0187778_10864907	Not Available	620	Open in IMG/M
3300017973\|Ga0187780_10913983	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	637	Open in IMG/M
3300017973\|Ga0187780_11221589	Not Available	551	Open in IMG/M
3300017975\|Ga0187782_11278008	Not Available	575	Open in IMG/M
3300018001\|Ga0187815_10027446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2419	Open in IMG/M
3300020069\|Ga0197907_10689188	Not Available	580	Open in IMG/M
3300020080\|Ga0206350_10558937	Not Available	922	Open in IMG/M
3300020081\|Ga0206354_10128145	Not Available	538	Open in IMG/M
3300021178\|Ga0210408_10509408	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	956	Open in IMG/M
3300021404\|Ga0210389_10049851	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3211	Open in IMG/M
3300021406\|Ga0210386_10025339	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	4642	Open in IMG/M
3300021475\|Ga0210392_10229138	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1308	Open in IMG/M
3300021560\|Ga0126371_10171437	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2247	Open in IMG/M
3300022525\|Ga0242656_1042627	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	765	Open in IMG/M
3300022530\|Ga0242658_1024885	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1113	Open in IMG/M
3300022718\|Ga0242675_1022633	Not Available	897	Open in IMG/M
3300024232\|Ga0247664_1115975	Not Available	623	Open in IMG/M
3300025898\|Ga0207692_10210112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1149	Open in IMG/M
3300025906\|Ga0207699_10001357	All Organisms → cellular organisms → Bacteria	11640	Open in IMG/M
3300025910\|Ga0207684_10002416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18842	Open in IMG/M
3300025915\|Ga0207693_10306811	Not Available	1243	Open in IMG/M
3300025928\|Ga0207700_10001568	All Organisms → cellular organisms → Bacteria	12968	Open in IMG/M
3300025928\|Ga0207700_10018239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	4711	Open in IMG/M
3300025928\|Ga0207700_10229806	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1576	Open in IMG/M
3300025928\|Ga0207700_11110892	Not Available	707	Open in IMG/M
3300025929\|Ga0207664_10016945	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	5329	Open in IMG/M
3300025929\|Ga0207664_10089188	Not Available	2525	Open in IMG/M
3300025949\|Ga0207667_10003580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19198	Open in IMG/M
3300026078\|Ga0207702_10002009	All Organisms → cellular organisms → Bacteria	19718	Open in IMG/M
3300026078\|Ga0207702_10006415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10148	Open in IMG/M
3300026304\|Ga0209240_1000939	All Organisms → cellular organisms → Bacteria	11774	Open in IMG/M
3300026475\|Ga0257147_1005548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1557	Open in IMG/M
3300026514\|Ga0257168_1000013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8420	Open in IMG/M
3300026530\|Ga0209807_1029338	All Organisms → cellular organisms → Bacteria	2649	Open in IMG/M
3300026557\|Ga0179587_10490740	Not Available	805	Open in IMG/M
3300027273\|Ga0209886_1021891	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	957	Open in IMG/M
3300027273\|Ga0209886_1086733	Not Available	505	Open in IMG/M
3300027496\|Ga0208987_1028933	Not Available	969	Open in IMG/M
3300027496\|Ga0208987_1108268	Not Available	507	Open in IMG/M
3300027528\|Ga0208985_1001239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	4169	Open in IMG/M
3300027590\|Ga0209116_1021430	Not Available	1338	Open in IMG/M
3300027857\|Ga0209166_10721422	Not Available	501	Open in IMG/M
3300027869\|Ga0209579_10325857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	829	Open in IMG/M
3300027895\|Ga0209624_10617554	Not Available	718	Open in IMG/M
3300028552\|Ga0302149_1166978	Not Available	574	Open in IMG/M
3300028881\|Ga0307277_10577135	Not Available	505	Open in IMG/M
3300030007\|Ga0311338_11407433	Not Available	648	Open in IMG/M
3300030056\|Ga0302181_10307022	Not Available	703	Open in IMG/M
3300030494\|Ga0310037_10312558	Not Available	667	Open in IMG/M
3300030743\|Ga0265461_14013906	Not Available	501	Open in IMG/M
3300030937\|Ga0138302_1718501	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1039	Open in IMG/M
3300031022\|Ga0138301_1213483	Not Available	639	Open in IMG/M
3300031231\|Ga0170824_107365461	Not Available	761	Open in IMG/M
3300031234\|Ga0302325_11228768	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	994	Open in IMG/M
3300031234\|Ga0302325_11228768	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	994	Open in IMG/M
3300031236\|Ga0302324_103173699	Not Available	542	Open in IMG/M
3300031446\|Ga0170820_11222109	Not Available	601	Open in IMG/M
3300031474\|Ga0170818_112976359	Not Available	540	Open in IMG/M
3300031670\|Ga0307374_10548507	Not Available	604	Open in IMG/M
3300031708\|Ga0310686_111644815	Not Available	737	Open in IMG/M
3300031708\|Ga0310686_119083747	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	732	Open in IMG/M
3300031718\|Ga0307474_10188782	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1566	Open in IMG/M
3300032160\|Ga0311301_10266143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2800	Open in IMG/M
3300032783\|Ga0335079_10231558	Not Available	2039	Open in IMG/M
3300032805\|Ga0335078_10027073	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	8504	Open in IMG/M
3300032893\|Ga0335069_10036863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora → Rugosimonospora africana	6564	Open in IMG/M
3300032893\|Ga0335069_10114830	All Organisms → Viruses → Predicted Viral	3382	Open in IMG/M
3300032893\|Ga0335069_10300582	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1910	Open in IMG/M
3300032895\|Ga0335074_10288002	Not Available	1890	Open in IMG/M
3300032895\|Ga0335074_11035794	Not Available	718	Open in IMG/M
3300032896\|Ga0335075_10025039	All Organisms → cellular organisms → Bacteria	8712	Open in IMG/M
3300032896\|Ga0335075_10185116	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2522	Open in IMG/M
3300032896\|Ga0335075_10318984	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1720	Open in IMG/M
3300032896\|Ga0335075_10899889	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	811	Open in IMG/M
3300032898\|Ga0335072_10764962	Not Available	931	Open in IMG/M
3300032898\|Ga0335072_11506983	Not Available	574	Open in IMG/M
3300033412\|Ga0310810_10054591	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	4859	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.18%
Host-Associated	Host-Associated	6.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.15%
Plants	Host-Associated → Plants	6.82%
Aquatic	Environmental → Aquatic	3.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.61%
Peat	Environmental → Terrestrial → Peat	4.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.55%
Freshwater	Environmental → Aquatic → Freshwater	1.52%
Rhizome	Host-Associated → Plants → Rhizome	1.52%
Marine	Environmental → Aquatic → Marine	0.76%
Sediment	Environmental → Aquatic → Sediment	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.67%
Loam	Environmental → Terrestrial → Soil → Loam	27.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.55%
Sand	Environmental → Terrestrial → Soil → Sand	2.27%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	1.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.76%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Coastal	Environmental → Aquatic → Marine → Coastal	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Clay	Environmental → Terrestrial → Soil → Clay	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	22.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.39%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.55%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	1.52%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	5.30%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.79%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.27%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.27%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.52%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	1.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.76%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.76%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300004457	Marine viral communities from Newfoundland, Canada MC-1	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011070	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 52 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027273	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028552	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A10DRAFT_10059482	3300000651	Forest Soil	MHVNTIMDIFGGVLTIALVATILTKPNTAADVNAAGNQFTGALKQAEAG*
AP72_2010_repI_A001DRAFT_10693464	3300000893	Forest Soil	MHVNTIMDIFGGVLTIALVATILTKPNTAADVNAAGNQFTGALKQ
JGI25615J43890_10017642	3300002910	Grasslands Soil	MHVNDIFDIFGALLVIALVAVILTKKNTARDVSAAGHTFTGALAQAQKG*
rootL2_103491161	3300003322	Sugarcane Root And Bulk Soil	MKVNDFFDVLGGILTIALVATILSKPNTARDIQAAGAAFTGAIREAQS*
rootH1_1009431422	3300003323	Sugarcane Root And Bulk Soil	MKVNDFFDVLGGILTIALVATILSKPNTANDIKAAGAAFTGAIREAQS*
Ga0066224_11487471	3300004457	Marine	MNVNDIWDIFGGILVLALVATILTKPNTASDVNAAGNAFTGAIKAS
Ga0070709_100024413	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VEVNDFFDIVGGLLTIALVAVILTKPNTAADINAAGSQFTAALREAQSG*
Ga0070709_100509463	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MHIDDIFDIFGGLLTIALVAVFLTKPNTAADINAAGSQFTGALKQAQAGQ*
Ga0070714_10000105318	3300005435	Agricultural Soil	MEVNDFFDIVGGLLTIALVAVVLTKPNTAADINAAGNQFTSALREAQSG*
Ga0070714_1000011218	3300005435	Agricultural Soil	MDVHDFWSVIGGILTIALVATILTKPNTAADLNAAGSAFNGALHAAEAGS*
Ga0070714_10000255723	3300005435	Agricultural Soil	MDVHDIWSVIGGILTIALVATILTKPNTAQDISAAGSSFTGALRAAEAGSG*
Ga0070714_1000218338	3300005435	Agricultural Soil	MSVQNFFDIIGGLLTLALVAVILTKPNTASDINAAGNQFTGALKVAQAG*
Ga0070714_1004046992	3300005435	Agricultural Soil	MSVQNFFDIIGALLTIALVAVILTKPNTASDINAAGGQFSGALKVAEAG*
Ga0070713_1000225116	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MEVNDFFDIVGGILTIALVATILTKPNTASDINAAGNQFSAALREAQSG*
Ga0070713_1000408847	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VNVNDIWDIFGGILILALVATILTKPNTAKDVQAAGSAFSGAIKTAEAG*
Ga0070713_1001052221	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	IFDIFGGLLTIALVAVFLTKPNTAADINAAGSQFTGALKQAQAGQ*
Ga0070713_1005275382	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VQNFFDIIGALLTIALVAVILTKPNTASDINAAGGQFSGALKVAEAG*
Ga0070713_1020385523	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MHIDDIFDIFGGLLTIALVAVFLTKPNTAADINAAGSQFTGA
Ga0070710_100618132	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MNVNDIWDIFGGILLLALVATILTKPNTAKDVQAAGSAFSGSIRAAEAG*
Ga0070694_1003391992	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKVNDFFDVLGGILTIALVATILTKPNTARDIKAAGDAFTGAIREAQS*
Ga0070681_102251754	3300005458	Corn Rhizosphere	MQVNDIFDIVGGLLTIALVAVILTKPNTAADINAAGSQFTGALRQAQAG*
Ga0070741_1000809521	3300005529	Surface Soil	MQVNDFFDIFGGLLTLALVATILTKPNTAADVNAVGSQFTGALRQAEAG*
Ga0070741_1001494524	3300005529	Surface Soil	MHVNDWFDIIGGLLTIALVATILTKPNTKGDIQAAGSAFTGALKQAEAG*
Ga0070679_1003423861	3300005530	Corn Rhizosphere	NDIFDIVGGLLTIALVAVILTKPNTAADINAAGSQFTGALRQAQAG*
Ga0070735_101121181	3300005534	Surface Soil	AARSEADPVKVEDVFDIIGGLLTIALVAVFLTKPNTASDVNAVGNQFSGALKTAEAG*
Ga0070684_1001812304	3300005535	Corn Rhizosphere	MKVNDLFDIFGGLLALALVAVFLTKQNTAKDVNAVGNQFTGALKQAEAG*
Ga0070730_102872801	3300005537	Surface Soil	MNVNDFWDIIGGILVLALVATVLTKPNTAGDINAAGGQFTGALKA
Ga0070731_103298842	3300005538	Surface Soil	MQVNDIFDIFGGLLIIALAAVFFTKPNTAQDVNAVGNQFTGALKQAEAG*
Ga0070695_1014933072	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	TPMKVNDFFDVLGGILTIALVATILSKPNTANDIKAAGAAFTGAIREAQS*
Ga0068855_1000073844	3300005563	Corn Rhizosphere	MKVNDFFDVLGGILTIALVATILSKPNTANDIKAAGAAFTGAIKEAQS*
Ga0066705_100202833	3300005569	Soil	VQVNDFFDIVGGLLTIALVATILTKPNTASDINAAGNQFTSALKAAQSG*
Ga0068856_10000230023	3300005614	Corn Rhizosphere	MKVNTIFDIFGAMFTLALVAVFFTKPNTAADVNAVGNQFTGALRVAEAG*
Ga0068856_1005573974	3300005614	Corn Rhizosphere	VHPNDVFDIIGGLLTIALVAVFLTKPNTAKDVNAVGTQFTGALKQAQAG*
Ga0070764_108631303	3300005712	Soil	MHVGDVFDIFGGLLTLAIIATILTKSNTASDINAAGTTFGGAIKDAEAG*
Ga0075029_1003291722	3300006052	Watersheds	MNVNDIWDIFGGILVLALVATILTKQNTASDVNAAGSAFTGAIKQAQAG*
Ga0070712_1000691096	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VKVEDVFDIIGGLLTIALVAVFLSKPNTASDVNAVGNQFSGALKQAEAG*
Ga0070712_1010093144	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MHVNDFFDIIGGLLTLALVAVFFTKPNTASDVNAVGNQFTGALKAAEAG*
Ga0066710_1004039133	3300009012	Grasslands Soil	MQVNDVFDIIGGLLTIALVATILTKPNTASDINAAGSNFTAALKQAQAG
Ga0066709_1000939464	3300009137	Grasslands Soil	MQVNDVFDIIGGLLTIALVATILTKPNTASDINAAGSNFTAALKQAQAG*
Ga0116220_100215823	3300009525	Peatlands Soil	MHVNDVFDIIGGILTIALVAVFLTKPNTASDVNAAGGQFTGALKQAEAG*
Ga0116216_103629652	3300009698	Peatlands Soil	MHLNDWLDIFGGLLTIALVAVFLTKANTASDVNAVGNQFSGALKQAEAG*
Ga0105071_10172683	3300009808	Groundwater Sand	VKVNDFFDVLGGILTIALVATILTKPNTARDIKAAGDAFTGAIREAQS*
Ga0126373_107746662	3300010048	Tropical Forest Soil	MNVNDIFDIFGGILVLALVATILTKPNTAADVNAVGNAFSGSIKTAEAG*
Ga0126373_113692372	3300010048	Tropical Forest Soil	MQVNDFWDLFGGILTIALVAVVLTKQNTSADVGAAGNAFTGALKQAEAG*
Ga0126373_122074522	3300010048	Tropical Forest Soil	MHASDIFDIIAGLLTLALVAVFLTKQNTAKDVNAVGNQFTGALKAAEAG*
Ga0134128_100946283	3300010373	Terrestrial Soil	MRVNDIFDIFGGILVLALVATILTKQNTASDVNAAGNQFTGAIKAAEAG*
Ga0136449_1035925153	3300010379	Peatlands Soil	MNVNDFWDIVGGILVLALIATVLTKPNTAGDINAAGGQFTGALKAAEAG*
Ga0126359_10472675	3300010869	Boreal Forest Soil	MHVNDVFDIFGGLLVIALAAVFLTKPNTAADVNAVGNQFTGALKQAEAG*
Ga0138567_10613024	3300011070	Peatlands Soil	MHVNDVFDIIGAILTIALVAVFLTKPNTASDVNAAGGQFTGALKQAEA
Ga0126317_102845366	3300011332	Soil	MKVSDFFDVIGGILTIALVATILNKSNTAPDLKAAGTAFTGALHEAKA*
Ga0137380_1000317124	3300012206	Vadose Zone Soil	MHVNDVFDIFGGLLTVAVIAVVLTKSNTAKDIQAAGGTFTAALKQAEAG*
Ga0137379_1000230322	3300012209	Vadose Zone Soil	MHVNDIFDIFGGLLTVAIVAVVLTKSNTAKDVQAAGGTFTAALKQAEAG*
Ga0137367_111613102	3300012353	Vadose Zone Soil	MKVNNIFDIFGGLLTLALVATILTKQNTAKDVQAAGAAFTGALKQAEAG*
Ga0157374_101584786	3300013296	Miscanthus Rhizosphere	MHVNDFFDIIGGLFTIALVAVILTKANTAADINAAGGQFTSALKQAQAG*
Ga0187779_100357137	3300017959	Tropical Peatland	MHVNDIMDIFGGLLTIALVAVILTKKNTASDVHAAGSAFTGALKQAEAG
Ga0187778_108649072	3300017961	Tropical Peatland	VNVNDIWDIFGGILVLALVATILTKPNTASDVNAAGNAFSGSIKAAEAG
Ga0187780_109139831	3300017973	Tropical Peatland	VNVNDIWDIFGGILVLALVATILTKPNTASDVNAAGNAFSGSIKADEAG
Ga0187780_112215891	3300017973	Tropical Peatland	REPMHVNDIMDIFGGLLTIALVAVILTKKNTASDVHAAGSAFTGALKQAEAG
Ga0187782_112780083	3300017975	Tropical Peatland	VNVNDIWDIFGGILVLALVAVILTKPNTASDLQAGGNAFSGAIKTAEAG
Ga0187815_100274464	3300018001	Freshwater Sediment	VNVNDFFDIIGGILLLALVAVFLTKPNTASDVNAVGNQFTGALKQAEAG
Ga0197907_106891882	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MKVNDFFDVLGGILTIALVATILSKPNTANDIKAAGAAFTGAIREAQS
Ga0206350_105589373	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MKVHDVLDIFGGLLTLALVAVFLTKPNTASDVNAVGNQFTGALKQAEAG
Ga0206354_101281454	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MKVNDFFDVLGGILTIALVATILSKPNTANDIKAAGAAFTGAIKEA
Ga0210408_105094082	3300021178	Soil	MNVNDIWDIFGGILVLALVATILTKPNTAKDVQAAGSAFSGAIKQAQAG
Ga0210389_100498515	3300021404	Soil	MRVSDIWDIFGGILVLALVATILTKNNTASDVNAAGTQFTGALKAAEAG
Ga0210386_100253394	3300021406	Soil	MNVNDIWDIFGGILVLALVAVILTKQNTASDVNAAGSAFSGAIKAADAG
Ga0210392_102291384	3300021475	Soil	MHANTIMDIFGGILTIALVAVILTKPNTASDITAAGSQFTGALKQAQAGQ
Ga0126371_101714373	3300021560	Tropical Forest Soil	MNVNDIFDIFGGILVLALVATILTKPNTAADVNAVGNAFSGSIKTAEAG
Ga0242656_10426271	3300022525	Soil	MQVNDFFDIIAGLLTIALAAVFLTKPNTANDINAAGNAFTGALRQAQAG
Ga0242658_10248854	3300022530	Soil	VRVNDIFDIFGGLLTLAVIAVILTKPNTASDIQAGGNAFSGALK
Ga0242675_10226333	3300022718	Soil	MGVHDWLDIFGGILTLALVAVFLTKANTATDVNAVGGQFTGAIKQAEAG
Ga0247664_11159754	3300024232	Soil	MQVNDIFDIIGGLLTIALVATILTKPNTAADINAAGTQFTSALRQAQAG
Ga0207692_102101124	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MDVHDFWSVIGGILTIALVATILTKPNTAADLNAAGSAFNGALHAAEAGS
Ga0207699_100013574	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MHIDDIFDIFGGLLTIALVAVFLTKPNTAADINAAGSQFTGALKQAQAGQ
Ga0207684_1000241611	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKVNDFFDVLGGILTIALVATILTKPNTARDIKAAGDAFTGAIREAQS
Ga0207693_103068114	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VKVEDVFDIIGGLLTIALVAVFLSKPNTASDVNAVGNQFSGALKQAEAG
Ga0207700_1000156822	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MDVHDIWSVIGGILTIALVATILTKPNTAQDISAAGSSFTGALRAAEAGSG
Ga0207700_100182393	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MEVNDFFDIVGGILTIALVATILTKPNTASDINAAGNQFSAALREAQSG
Ga0207700_102298061	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VNVNDIWDIFGGILILALVATILTKPNTAKDVQAAGSAFSGAIKTAEAG
Ga0207700_111108922	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VQNFFDIIGALLTIALVAVILTKPNTASDINAAGGQFSGALKVAEAG
Ga0207664_100169458	3300025929	Agricultural Soil	MSVQNFFDIIGGLLTLALVAVILTKPNTASDINAAGNQFTGALKVAQAG
Ga0207664_100891883	3300025929	Agricultural Soil	MSVQNFFDIIGALLTIALVAVILTKPNTASDINAAGGQFSGALKVAEAG
Ga0207667_1000358026	3300025949	Corn Rhizosphere	MKVNDFFDVLGGILTIALVATILSKPNTANDIKAAGAAFTGAIKEAQS
Ga0207702_1000200923	3300026078	Corn Rhizosphere	MKVNTIFDIFGAMFTLALVAVFFTKPNTAADVNAVGNQFTGALRVAEAG
Ga0207702_100064159	3300026078	Corn Rhizosphere	MKVNDLFDIFGGLLALALVAVFLTKQNTAKDVNAVGNQFTGALKQAEAG
Ga0209240_100093912	3300026304	Grasslands Soil	MHVNDIFDIFGALLVIALVAVILTKKNTARDVSAAGHTFTGALAQAQKG
Ga0257147_10055484	3300026475	Soil	VEVNDFFDIIGGLLTLALVATILTKPNTASDINAAGNQFTSALKQAEAG
Ga0257168_100001316	3300026514	Soil	VQVNDFFDIIGGLLTIALVAVILTKPNTASDLNAAGGAFTGALKQAQAG
Ga0209807_10293383	3300026530	Soil	VQVNDFFDIVGGLLTIALVATILTKPNTASDINAAGNQFTSALKAAQSG
Ga0179587_104907404	3300026557	Vadose Zone Soil	MNVHDIWSVIGGILTIALVATILTKGNTASDLNAAGTAFTGALRTAEAGTG
Ga0209886_10218914	3300027273	Groundwater Sand	VKVNDFFDVLGGILTIALVATILTKPNTARDIKAAGDAFTGAIREAQS
Ga0209886_10867331	3300027273	Groundwater Sand	VKVNDFFDVLGGILTIALVATILTKPNTARDIKAAGDAFTGAI
Ga0208987_10289333	3300027496	Forest Soil	MDVKSFWDIVGGILTIALVATILTKPNTAQDLTAAGTTFTSALSAAEAG
Ga0208987_11082682	3300027496	Forest Soil	VQVNDFFDIIGGLLTLALVATFLTKPNTANDVNAAGNAFTGALKQAEAG
Ga0208985_10012393	3300027528	Forest Soil	MNVSDGWDIFGGLLVLALVATVLTKPNTAGDINAAGGQFTGALKAAEAG
Ga0209116_10214302	3300027590	Forest Soil	MHVNDAFDIVGGILTIALVAVFFTKANTATDVNAVGQQFTSALSTAEAG
Ga0209166_107214223	3300027857	Surface Soil	MNVNDFWDIIGGILVLALVATVLTKPNTAGDINAAGGQFTGALKAAEAG
Ga0209579_103258574	3300027869	Surface Soil	MQVNDIFDIFGGLLIIALAAVFFTKPNTAQDVNAVGNQFTGALKQAEAG
Ga0209624_106175542	3300027895	Forest Soil	VHVNDFFDIVGGLLTIALVAVILTKANTSSDVSAAGTTFTQALAQAEKG
Ga0302149_11669782	3300028552	Bog	MHVNDFFDIIGGILTITLVAVFLTKPNTAADVNAAGNQFTGALKQAEAG
Ga0307277_105771352	3300028881	Soil	MKVNDVFDIIGGLLTIALVAVFLTKPNTASDINAVGTQFTGALKQAQAGQ
Ga0311338_114074331	3300030007	Palsa	MKVNDVFDIFGGLLTVAIVAVILTKANTATDVTAAGATFT
Ga0302181_103070222	3300030056	Palsa	MKVNDVFDIFGGLLTVAIVAVILTKANTATDVTAAGATFTSALTAAEAG
Ga0310037_103125583	3300030494	Peatlands Soil	MHLNDWLDIFGGLLTIALVAVFLTKANTASDVNAVGNQFSGALKQAEAG
Ga0265461_140139062	3300030743	Soil	MRVSTVLDIFGGILTIALVAVFLTKPNTASDVNAVGGQFTGALKQAEAG
Ga0138302_17185014	3300030937	Soil	MHVNDIFDIFGGLLTVALIAVILTKPNTANDVQAGGTAFSGALKQAEAG
Ga0138301_12134833	3300031022	Soil	VHVNDVFDIFGGLLTLALVATVLTKANTASDVNAAGTTFTSALKQAEAG
Ga0170824_1073654612	3300031231	Forest Soil	MHVNDFFDIIGGLLTLALVAVFFTKPNTASDVNAVGNQFTGALKAAEAG
Ga0302325_112287682	3300031234	Palsa	MKVNDIWDIFGGLLTLALVATILTKSNTASDLNAAGNQFTGALKQAEAG
Ga0302325_112287683	3300031234	Palsa	VHVNDIFDVIGGILAIALAAVILTKNGTAGDINAAGGAFTGALKTAEAG
Ga0302324_1031736991	3300031236	Palsa	MHVNDIFDIFGGLLLIALAAVFLTKPNTASDVNAVGGQFTGALKQAEAG
Ga0170820_112221092	3300031446	Forest Soil	MHVNDFFDIIGGLLTIALVAVFFTKPNTARDVNAVGNQFTGALKAAEAG
Ga0170818_1129763592	3300031474	Forest Soil	MHVNDFFDIIGGLLTLALVAVFFTKPNTARDVNAVGNQFTGALKAAEAG
Ga0307374_105485073	3300031670	Soil	MADVKVNDFFDIFAAILTIALVAVVLTKKNTATDLQAGGSAFNGAIKQAEAG
Ga0310686_1116448152	3300031708	Soil	FWDIIGGILVLALVATVLTKPNTAGDINAAGGQFTGALKAAEAG
Ga0310686_1190837474	3300031708	Soil	VNVNDFWDIIGGILVLALVATVLTKPNTAGDINAAGGQFTGALKAAEAG
Ga0307474_101887825	3300031718	Hardwood Forest Soil	MNVNDIWDIFGGLLVLAVIATILTKQNTASDVNAAGNAFSGAIKASEAG
Ga0311301_102661433	3300032160	Peatlands Soil	MHVNDVFDIIGGILTIALVAVFLTKPNTASDVNAAGGQFTGALKQAEAG
Ga0335079_102315584	3300032783	Soil	MHVYDVFDIFAGILTIALIAVILSKPNTASDIHATGSAFTSALKQAEAG
Ga0335078_1002707314	3300032805	Soil	VNVNDIWDVLGGILVLALVATILTKPNTAKDINAAGGAFTGAIKQSEAG
Ga0335069_1003686311	3300032893	Soil	MHPNDVFDIIGGLLTIALVAVFLTKPNTAADVNAVGNQFTGALKQAQAG
Ga0335069_101148306	3300032893	Soil	VKVEDVFDIIGGLLTIALVAVFLTKPNTASDVNAVGNQFSGALKQAEAG
Ga0335069_103005824	3300032893	Soil	VNVNDIWDIFGGILVLALVATILTKPNTAKDVQAAGSAFSGAIKQAQAG
Ga0335074_102880023	3300032895	Soil	MHVNDIFDIFGGLLFIALVAVILTKKNTATDVGAAGSAFTGSLKQAEAG
Ga0335074_110357943	3300032895	Soil	MHINDFLDIFGALLVIALVAVFLTKPNTASDVNAVGNQFTGALKQAEAG
Ga0335075_100250399	3300032896	Soil	MHFSDIIDIIGGILTIALVAVFLTKPNTASDVNAVGNQFTGALKTAEAG
Ga0335075_101851166	3300032896	Soil	MHVNDVLDIFGGLLTIALVAVFLTKPNTSSDVNAVGNQFTGALKQAEAG
Ga0335075_103189843	3300032896	Soil	MHVNDVFDIFGGILVLALIATILTKPNTSSDINAAGTQFTGALKTAEAG
Ga0335075_108998894	3300032896	Soil	MHVTDWLDIFGGLLTIALVAVFFTKANTASDVNAVGNQFTGALKQAEAG
Ga0335072_107649623	3300032898	Soil	MQVNDVFDIIGGLLTIGLVATILAKPNTASDINAAGGQFTGALKQAEAG
Ga0335072_115069832	3300032898	Soil	MHAGDIIDILALILTIALAATFLTKPNTASDVNAVGNQFTGAIKQAEAG
Ga0310810_100545914	3300033412	Soil	MKVNTFFDVFGGLLTIALVAVILTKPNTKSVIQASGSAFTGALKQAEAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061140

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences