Metagenome / Metatranscriptome Family F061143

Basic Information
Family ID	F061143
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	39 residues
Representative Sequence	MTATLNFLSRITNEVFESQMQRAARKICERQHYFGGRAA
Number of Associated Samples	96
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.58 %
% of genes near scaffold ends (potentially truncated)	19.70 %
% of genes from short scaffolds (< 2000 bps)	74.24 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Bacteria (64.394 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (19.697 % of family members)
Environment Ontology (ENVO)	Unclassified (43.182 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (72.727 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.22% β-sheet: 0.00% Coil/Unstructured: 44.78%
Feature Viewer

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Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF13419	HAD_2	34.09
PF00724	Oxidored_FMN	30.30
PF13242	Hydrolase_like	8.33
PF00702	Hydrolase	6.06
PF07015	VirC1	2.27
PF00083	Sugar_tr	2.27
PF03776	MinE	2.27
PF13458	Peripla_BP_6	1.52
PF04314	PCuAC	0.76
PF00296	Bac_luciferase	0.76
PF12680	SnoaL_2	0.76
PF07366	SnoaL	0.76
PF03466	LysR_substrate	0.76
PF00589	Phage_integrase	0.76
PF06938	DUF1285	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	30.30
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	30.30
COG0851	Septum formation topological specificity factor MinE	Cell cycle control, cell division, chromosome partitioning [D]	2.27
COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	Cell cycle control, cell division, chromosome partitioning [D]	2.27
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.76
COG2847	Copper(I)-binding protein	Inorganic ion transport and metabolism [P]	0.76
COG3816	Uncharacterized conserved protein, DUF1285 family	Function unknown [S]	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.39 %
Unclassified	root	N/A	35.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.39 %
Unclassified	root	N/A	35.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.39 %
Unclassified	root	N/A	35.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.70 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14.39 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.52 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.61 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.52 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1050760	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300003505\|JGIcombinedJ51221_10026843	All Organisms → cellular organisms → Bacteria	2068	Open in IMG/M
3300004092\|Ga0062389_102934448	Not Available	637	Open in IMG/M
3300004633\|Ga0066395_11004287	Not Available	509	Open in IMG/M
3300005167\|Ga0066672_10917241	Not Available	541	Open in IMG/M
3300005332\|Ga0066388_100044628	All Organisms → cellular organisms → Bacteria → Proteobacteria	4445	Open in IMG/M
3300005332\|Ga0066388_100222367	All Organisms → cellular organisms → Bacteria	2518	Open in IMG/M
3300005332\|Ga0066388_100829054	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300005332\|Ga0066388_103153257	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300005332\|Ga0066388_106786617	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005363\|Ga0008090_10019868	Not Available	564	Open in IMG/M
3300005363\|Ga0008090_14445305	Not Available	972	Open in IMG/M
3300005363\|Ga0008090_15727652	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300005436\|Ga0070713_100235158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1667	Open in IMG/M
3300005454\|Ga0066687_10202070	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300005468\|Ga0070707_100880188	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300005534\|Ga0070735_10290750	All Organisms → cellular organisms → Bacteria → Proteobacteria	986	Open in IMG/M
3300005713\|Ga0066905_101749323	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005764\|Ga0066903_100024962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6543	Open in IMG/M
3300005764\|Ga0066903_100353556	All Organisms → cellular organisms → Bacteria → Proteobacteria	2377	Open in IMG/M
3300005764\|Ga0066903_102651455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	972	Open in IMG/M
3300005764\|Ga0066903_103001601	Not Available	914	Open in IMG/M
3300005764\|Ga0066903_103501791	Not Available	846	Open in IMG/M
3300005764\|Ga0066903_104556785	Not Available	739	Open in IMG/M
3300006028\|Ga0070717_10490578	All Organisms → cellular organisms → Bacteria → Proteobacteria	1109	Open in IMG/M
3300006031\|Ga0066651_10124517	Not Available	1327	Open in IMG/M
3300006050\|Ga0075028_100897083	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300006052\|Ga0075029_100587251	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300006175\|Ga0070712_100004013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9043	Open in IMG/M
3300006755\|Ga0079222_10090767	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300006755\|Ga0079222_10111091	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300006800\|Ga0066660_10489897	Not Available	1032	Open in IMG/M
3300006804\|Ga0079221_10843231	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300006806\|Ga0079220_10007922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3974	Open in IMG/M
3300006893\|Ga0073928_10694482	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300006954\|Ga0079219_10019035	All Organisms → cellular organisms → Bacteria	2502	Open in IMG/M
3300009137\|Ga0066709_103270544	Not Available	590	Open in IMG/M
3300010043\|Ga0126380_11090470	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300010046\|Ga0126384_10078390	All Organisms → cellular organisms → Bacteria	2371	Open in IMG/M
3300010046\|Ga0126384_10192168	Not Available	1609	Open in IMG/M
3300010048\|Ga0126373_10177075	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300010048\|Ga0126373_10219173	All Organisms → cellular organisms → Bacteria → Proteobacteria	1855	Open in IMG/M
3300010048\|Ga0126373_11794648	Not Available	677	Open in IMG/M
3300010048\|Ga0126373_11807523	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300010358\|Ga0126370_10015862	All Organisms → cellular organisms → Bacteria	4200	Open in IMG/M
3300010359\|Ga0126376_10968917	Not Available	848	Open in IMG/M
3300010359\|Ga0126376_11280033	Not Available	752	Open in IMG/M
3300010360\|Ga0126372_10000918	All Organisms → cellular organisms → Bacteria → Proteobacteria	11291	Open in IMG/M
3300010360\|Ga0126372_11019339	Not Available	841	Open in IMG/M
3300010360\|Ga0126372_11762271	Not Available	662	Open in IMG/M
3300010360\|Ga0126372_12954431	Not Available	527	Open in IMG/M
3300010361\|Ga0126378_11381419	Not Available	797	Open in IMG/M
3300010361\|Ga0126378_12119540	Not Available	641	Open in IMG/M
3300010361\|Ga0126378_12665110	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300010366\|Ga0126379_10427251	Not Available	1380	Open in IMG/M
3300010366\|Ga0126379_10634632	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300010376\|Ga0126381_103407756	Not Available	626	Open in IMG/M
3300010376\|Ga0126381_104984961	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300012206\|Ga0137380_10021467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5932	Open in IMG/M
3300012948\|Ga0126375_10003482	All Organisms → cellular organisms → Bacteria	5676	Open in IMG/M
3300015371\|Ga0132258_10110466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6505	Open in IMG/M
3300016319\|Ga0182033_10101893	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300016319\|Ga0182033_12198180	Not Available	503	Open in IMG/M
3300016445\|Ga0182038_11063904	Not Available	718	Open in IMG/M
3300017924\|Ga0187820_1000327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10588	Open in IMG/M
3300017924\|Ga0187820_1000593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7976	Open in IMG/M
3300017927\|Ga0187824_10227305	Not Available	642	Open in IMG/M
3300017932\|Ga0187814_10007934	All Organisms → cellular organisms → Bacteria → Proteobacteria	4207	Open in IMG/M
3300017936\|Ga0187821_10194269	Not Available	778	Open in IMG/M
3300017937\|Ga0187809_10047209	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300017959\|Ga0187779_10497166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	806	Open in IMG/M
3300017961\|Ga0187778_10000435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	29648	Open in IMG/M
3300017961\|Ga0187778_10230296	All Organisms → cellular organisms → Bacteria → Proteobacteria	1186	Open in IMG/M
3300017970\|Ga0187783_10035775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3679	Open in IMG/M
3300017970\|Ga0187783_10205345	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300017970\|Ga0187783_10241025	Not Available	1323	Open in IMG/M
3300017970\|Ga0187783_10241375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1322	Open in IMG/M
3300017973\|Ga0187780_10000050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	88160	Open in IMG/M
3300017974\|Ga0187777_10078216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2154	Open in IMG/M
3300018006\|Ga0187804_10214566	Not Available	824	Open in IMG/M
3300018058\|Ga0187766_10175348	All Organisms → cellular organisms → Bacteria → Proteobacteria	1343	Open in IMG/M
3300018060\|Ga0187765_10084221	All Organisms → cellular organisms → Bacteria → Proteobacteria	1703	Open in IMG/M
3300018064\|Ga0187773_10699155	Not Available	632	Open in IMG/M
3300018085\|Ga0187772_10408332	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300018090\|Ga0187770_10864774	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300019888\|Ga0193751_1000443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	32716	Open in IMG/M
3300020579\|Ga0210407_10188164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1602	Open in IMG/M
3300020581\|Ga0210399_10015676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5978	Open in IMG/M
3300021168\|Ga0210406_10058154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3361	Open in IMG/M
3300021168\|Ga0210406_10481180	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300021420\|Ga0210394_10234854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1604	Open in IMG/M
3300021478\|Ga0210402_10824911	Not Available	853	Open in IMG/M
3300021560\|Ga0126371_10244484	All Organisms → cellular organisms → Bacteria	1906	Open in IMG/M
3300021560\|Ga0126371_11181325	Not Available	902	Open in IMG/M
3300021560\|Ga0126371_12013366	Not Available	695	Open in IMG/M
3300021560\|Ga0126371_12148148	All Organisms → cellular organisms → Bacteria → Proteobacteria	673	Open in IMG/M
3300022557\|Ga0212123_10062933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3266	Open in IMG/M
3300024271\|Ga0224564_1126411	Not Available	525	Open in IMG/M
3300026322\|Ga0209687_1094820	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300026552\|Ga0209577_10260342	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300026979\|Ga0207817_1032915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300027070\|Ga0208365_1001570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2509	Open in IMG/M
3300027090\|Ga0208604_1005784	Not Available	1167	Open in IMG/M
3300027610\|Ga0209528_1020749	All Organisms → cellular organisms → Bacteria → Proteobacteria	1447	Open in IMG/M
3300027645\|Ga0209117_1059874	Not Available	1106	Open in IMG/M
3300027765\|Ga0209073_10104037	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300027787\|Ga0209074_10076592	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300027894\|Ga0209068_10977887	Not Available	503	Open in IMG/M
3300027910\|Ga0209583_10801974	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300027986\|Ga0209168_10267577	All Organisms → cellular organisms → Bacteria → Proteobacteria	844	Open in IMG/M
3300030730\|Ga0307482_1266627	Not Available	542	Open in IMG/M
3300031446\|Ga0170820_10443470	Not Available	516	Open in IMG/M
3300031543\|Ga0318516_10000534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12269	Open in IMG/M
3300031544\|Ga0318534_10507600	Not Available	689	Open in IMG/M
3300031573\|Ga0310915_10078699	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300031573\|Ga0310915_10512039	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300031668\|Ga0318542_10096531	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300031679\|Ga0318561_10495857	Not Available	672	Open in IMG/M
3300031736\|Ga0318501_10199710	Not Available	1046	Open in IMG/M
3300031747\|Ga0318502_10723135	Not Available	602	Open in IMG/M
3300031753\|Ga0307477_10043757	All Organisms → cellular organisms → Bacteria	3075	Open in IMG/M
3300031793\|Ga0318548_10639218	Not Available	517	Open in IMG/M
3300031833\|Ga0310917_10784694	Not Available	643	Open in IMG/M
3300031859\|Ga0318527_10091718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1239	Open in IMG/M
3300031879\|Ga0306919_10106070	Not Available	1986	Open in IMG/M
3300031897\|Ga0318520_10568293	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300031912\|Ga0306921_10000152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	51211	Open in IMG/M
3300031954\|Ga0306926_10234754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2274	Open in IMG/M
3300031954\|Ga0306926_10496453	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300032076\|Ga0306924_12040095	Not Available	590	Open in IMG/M
3300032174\|Ga0307470_11287277	Not Available	598	Open in IMG/M
3300032261\|Ga0306920_100085544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4647	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.24%
Host-Associated	Host-Associated	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.64%
Aquatic	Environmental → Aquatic	10.61%
Plants	Host-Associated → Plants	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.64%
Freshwater	Environmental → Aquatic → Freshwater	6.06%
Sediment	Environmental → Aquatic → Sediment	3.03%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.61%
Loam	Environmental → Terrestrial → Soil → Loam	17.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.03%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.24%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.39%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.30%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.03%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.27%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.64%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	10.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.27%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.27%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10507601	3300000580	Forest Soil	VTATLNFLSRITNQVFESQMQRAAQRICERQQYFSRAA*
JGIcombinedJ51221_100268432	3300003505	Forest Soil	MTATLKFLSRITNEVFESQMQRAAQKICERQHYFGGRAA*
Ga0062389_1029344482	3300004092	Bog Forest Soil	MTATLNFLSRITNEVFESQMQRAARKICERQHYFGGRTA*
Ga0066395_110042872	3300004633	Tropical Forest Soil	MTATLNFLSRITNEVFEAQMRRAARKIRERQHYFGSRTT*
Ga0066672_109172412	3300005167	Soil	MIATLKFLSRITNEVFESQMQRAAQRICERQQYFVRRVA*
Ga0066388_1000446286	3300005332	Tropical Forest Soil	MTATLKFLSRITNEVFESQMQRAAQRICKRQHYFARRAV*
Ga0066388_1002223673	3300005332	Tropical Forest Soil	MTATLNFLSRITNEVFETQMQRAARKICERQHYFGTRTA*
Ga0066388_1008290542	3300005332	Tropical Forest Soil	MTATLNFLSRITNEVFEAQMQRVARKICERQHYFGGRTA*
Ga0066388_1031532572	3300005332	Tropical Forest Soil	MTAATLNFLSRITNKVFESQMQRAARKICERQHYFGGRTA*
Ga0066388_1067866171	3300005332	Tropical Forest Soil	MTATLEFLSRITNEVFESQMQRAARKICERQHYFGARAV*
Ga0008090_100198682	3300005363	Tropical Rainforest Soil	MTATLRFLSRLTNDVFEAQMQRAARKICERQHYFAGRIV*
Ga0008090_144453052	3300005363	Tropical Rainforest Soil	MIATLKFLSRVTNEIFESRMQREAEKISERQHYFGRRAS*
Ga0008090_157276522	3300005363	Tropical Rainforest Soil	MTATLNFLSRITNEVFESQMQRVARKICERQHYFGGRAA*
Ga0070713_1002351582	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTATLNFLSRITNEVFESQMQRAARKICERQHYFGARTA*
Ga0066687_102020702	3300005454	Soil	MIATLKFLSRITDQVFEAQMQRAAQRICERQQYFVRRAA*
Ga0070707_1008801882	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MIATLKFLSRITNEVFESRMQRAAQRICERQQYFVRRAA*
Ga0070735_102907502	3300005534	Surface Soil	MTTTLKFLSRLTNEVFEAQMQRAARKICERQHYFGAHTA*
Ga0066905_1017493231	3300005713	Tropical Forest Soil	MTAATLNFLSRITNEVFETQMQRAARKICERQHYFGGRTA*
Ga0066903_1000249627	3300005764	Tropical Forest Soil	MTATLSFLSRITNQVFELQMQRAAQRICERQHYFGRAA*
Ga0066903_1003535562	3300005764	Tropical Forest Soil	MTATLNFLSRITNEVFESQMQRAARKICERQHYFGGRAA*
Ga0066903_1026514552	3300005764	Tropical Forest Soil	MIATLNFLSRITNEVFESQMQRAARKICERQHYFGGRTA*
Ga0066903_1030016011	3300005764	Tropical Forest Soil	MTATLNFLSCITNQVFELQMQRAAKRICERQQYFSRAA*
Ga0066903_1035017911	3300005764	Tropical Forest Soil	ATGSTPMTATLKFLSRITNEVFESQMQRAARKICERQHYFGARAV*
Ga0066903_1045567851	3300005764	Tropical Forest Soil	MIATLKFLSRIADNVFESQMQRAAQKICERQYYFGRLA*
Ga0070717_104905782	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MIATLKFLSRITDQVFESQMQRAAKRICERQQYFVRRAA*
Ga0066651_101245172	3300006031	Soil	MTATLKFLSRITNEVFELQMQRVARKISERQHYFARTA*
Ga0075028_1008970832	3300006050	Watersheds	MIATLKFLSRITDQVFESQMQRAAQRICERQQYFVRRAA*
Ga0075029_1005872512	3300006052	Watersheds	MTATLNFLSRITNEVFESQMQRAAQKICERQHYFGGRAA*
Ga0070712_10000401310	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTATLNFLSRITNEVFESQMQRAARKICERQHYFGTRTA*
Ga0079222_100907672	3300006755	Agricultural Soil	MTATLNFLSRITNEVFESQMQRAARKICERQHYFGRTA*
Ga0079222_101110912	3300006755	Agricultural Soil	MTATLNFLSRITNEVFELQMQRVARKISERQHYFARTA*
Ga0066660_104898972	3300006800	Soil	MIATLKFLSRITNEVFESQMQRAAQRICERQQYFVRHAA*
Ga0079221_108432312	3300006804	Agricultural Soil	MTATLKYLSRLTDEFFEAQMQRVARKICERQHYFGRTA*
Ga0079220_100079224	3300006806	Agricultural Soil	MTATLNFLSRITNEVFQSQMQRAARKICERQHYFGRTA*
Ga0073928_106944822	3300006893	Iron-Sulfur Acid Spring	MIATLKFLNRITNEVFESQMQRAAQRICERQQYFVRRAA*
Ga0079219_100190352	3300006954	Agricultural Soil	MTATLNFLSRITNEVFESQMQRAARKICERQHYFGHTA*
Ga0066709_1032705441	3300009137	Grasslands Soil	MIASLKFLSRITDQVFESQMQRAAQRICERQQYFVRRAA*
Ga0126380_110904702	3300010043	Tropical Forest Soil	MTAATLNFLSRITNEVFETQMQRAARKICERQHYFGG
Ga0126384_100783901	3300010046	Tropical Forest Soil	MTATLNFLSRITNQVFESQMQRAAQRICERQQYFSRAA*
Ga0126384_101921682	3300010046	Tropical Forest Soil	MTAATLNFLSRITNKVFESQMQRAARKICERQHYFGGHTA*
Ga0126373_101770752	3300010048	Tropical Forest Soil	MTATLNFLSRITNEVFEAQMRRAARKIRERQHYFGGRTT*
Ga0126373_102191732	3300010048	Tropical Forest Soil	MIATLKFLSRIADDVFESQMQRAARKICERQFYFGRLA*
Ga0126373_117946482	3300010048	Tropical Forest Soil	MIATLNFLSRITNEVFESQMQRVARKICERQHYFGGRTA*
Ga0126373_118075232	3300010048	Tropical Forest Soil	MTATLRFLTRITNAVFEFHMQRVAREICERQQYFGRVA*
Ga0126370_100158623	3300010358	Tropical Forest Soil	MTATLNFLSRITNEVFESQMQRVARKICERQHYFGGRTA*
Ga0126376_109689172	3300010359	Tropical Forest Soil	MTATLNFLSRITNQVFELQMQRAAQTICERQQYFSRAA*
Ga0126376_112800331	3300010359	Tropical Forest Soil	MTATLNFLSRITNEVFESQMQRAARKMCERQHYFGGRAA*
Ga0126372_100009188	3300010360	Tropical Forest Soil	MTATLNFLSRITNEVFEAQMRRAARKIRERQHYFASRTT*
Ga0126372_110193392	3300010360	Tropical Forest Soil	TGSTAMTATLKFLSRITNEVFESQMQRAAQRICKRQHYFARRAV*
Ga0126372_117622712	3300010360	Tropical Forest Soil	MTATLSFLSRITNQVFELQMQRAARRICERQQYFGRAA*
Ga0126372_129544312	3300010360	Tropical Forest Soil	MIATLNFLSRITNEVFESQMQRAARKICERQHYFGGRAA*
Ga0126378_113814192	3300010361	Tropical Forest Soil	TGSIPMTATLNFLSRITNEVFESQMQRAARKICERQHYFGGRTA*
Ga0126378_121195402	3300010361	Tropical Forest Soil	TATLNFLSRITNQVFESQMQRAAQRICERQQYFSRAA*
Ga0126378_126651101	3300010361	Tropical Forest Soil	MTAATLNFLSRITNEVFETQMQRAARKICERQHYFGGHSA*
Ga0126379_104272513	3300010366	Tropical Forest Soil	MTATLNFLSRITNEVFESQMQRAARKICERQHYFGGRTT*
Ga0126379_106346322	3300010366	Tropical Forest Soil	MTAATLNFLSRITNEVFETQMQLAARKICERQHYFGGRTA*
Ga0126381_1034077561	3300010376	Tropical Forest Soil	GSTTMIATLKFLSRIADDVFESQMQRAARKICERQFYFGRLA*
Ga0126381_1049849611	3300010376	Tropical Forest Soil	MTATLNFLSRITNEVFETHMQRAARKICERQHYFGGRTA*
Ga0137380_100214675	3300012206	Vadose Zone Soil	MTATLKFLSRITNEVFESQMQRAAQRICERQQYFVRRAA*
Ga0126375_100034827	3300012948	Tropical Forest Soil	MTAATLNFLSRITNEVFETQMQRAARKICERQHYFGGHTA*
Ga0132258_1011046610	3300015371	Arabidopsis Rhizosphere	MTATLKFLSRITNEVFESQMQRAARKICERQHYFGARAV*
Ga0182033_101018932	3300016319	Soil	MTATLNFLSRITNEVFESQMQRAARKICERQHYFGGRTV
Ga0182033_121981802	3300016319	Soil	MIAAPRSLGQVTNEIFESQMQRAARKICEHQQYFGHRAS
Ga0182038_110639043	3300016445	Soil	MIATLKLLGRVTNEIFESQMQRAAKQISERQHYFVRRGR
Ga0187820_10003275	3300017924	Freshwater Sediment	MTATLNFLSRITNEVFESRMQRAARKICERQHYFGGRTA
Ga0187820_10005935	3300017924	Freshwater Sediment	MFATLKFLGRVTNEIFESRMQRAARKISERQHYFGRRPRS
Ga0187824_102273052	3300017927	Freshwater Sediment	MTATLKFLSRITNEVFESQMERAARKICERQHYFGGRAA
Ga0187814_100079344	3300017932	Freshwater Sediment	MTATLNFLSRITNEVFESQMQRAARKICERQHYFGGRTA
Ga0187821_101942692	3300017936	Freshwater Sediment	MTATLNFLSRITNEVFESQMQRAARKICERQHYFGRTA
Ga0187809_100472092	3300017937	Freshwater Sediment	MFAALKFLGRVTNDIFESRMQRAARKISERQNFFSRPAR
Ga0187779_104971662	3300017959	Tropical Peatland	MTATLNFLSRITNEMFESQMQRAARKICERQHYFGGRTA
Ga0187778_1000043511	3300017961	Tropical Peatland	MFATLKYLGRVTNEIFESRMQRAARKISERQHFFGRRAR
Ga0187778_102302962	3300017961	Tropical Peatland	MIAALKFLGQVTNEIFESQMQRAARKICERQHYFGHRAS
Ga0187783_100357755	3300017970	Tropical Peatland	MFAALKFLGRVTNEIFESRMQRAARKIGERRHFFGRRAR
Ga0187783_102053452	3300017970	Tropical Peatland	MAEPPMIGTLKFLGRVTNEIFESQMRRAARKISERQHFFGRRPRS
Ga0187783_102410251	3300017970	Tropical Peatland	ERPMIATLKLLGRVTNEIFESQMQRAAKQISERQHYFVRRGR
Ga0187783_102413752	3300017970	Tropical Peatland	MIATLKLLGRVTNEIFESQMQRAAKQISERQHYFGRR
Ga0187780_1000005050	3300017973	Tropical Peatland	MFATLKYLGRVTNEIFESRMQRAARKTSERQHFFGRRAR
Ga0187777_100782161	3300017974	Tropical Peatland	MIAALKFLGRVTNEIFESRMQSAARKISERQHYFGRRSS
Ga0187804_102145662	3300018006	Freshwater Sediment	MFATLKFLGRVTSEIFESRMQRAARKISERQHYFGRRPRS
Ga0187766_101753482	3300018058	Tropical Peatland	MIATLKFLSRFTNEVFEAQMQRAARKIRERQHYFGGRTA
Ga0187765_100842212	3300018060	Tropical Peatland	MFATLKFFRRVTNEIFESQMQRAARKISERQHYFGRRPR
Ga0187773_106991551	3300018064	Tropical Peatland	MAATLNFLSRITNEVFETQMQRVARKICERQHYFGGRTA
Ga0187772_104083322	3300018085	Tropical Peatland	MIATLKFLGRVTNEIFESQMRRAARKISERQHFFGRRPRS
Ga0187770_108647741	3300018090	Tropical Peatland	PPMIAALKFLGQVTNEIFESQMQRAARKICERQHYFGHRAS
Ga0193751_100044325	3300019888	Soil	MTATLKFLNRITNEVFESQMQRAAQRICERQQYFIRRVA
Ga0210407_101881642	3300020579	Soil	MIATLKFLSRITDQVFESQMQRAAQRICERQQCFVRRAA
Ga0210399_100156768	3300020581	Soil	MTATLNFLSRITNEVFESRMRRAARKICERQHYFGTHTA
Ga0210406_100581546	3300021168	Soil	TGSTPMTATLNFLSRITNEVFESRMQRAARKICERQHYFGTHTA
Ga0210406_104811803	3300021168	Soil	VTATLNFLSRITNEVFESRMQRAARKICERQHYFGTHTA
Ga0210394_102348543	3300021420	Soil	ITPMTATLKFLSRITNEVFESQMQRAAQKICERQHYFGGRAA
Ga0210402_108249112	3300021478	Soil	MTATLKFLSRITNEVFESQMQRAAQKICERQHYFGGRAA
Ga0126371_102444842	3300021560	Tropical Forest Soil	MIATLKFLSRIADDVFESQMQRAARKICERQFYFGRLA
Ga0126371_111813252	3300021560	Tropical Forest Soil	TGSTAMTATLKFLSRITNEVFESQMQRAAQRICKRQHYFARRAV
Ga0126371_120133661	3300021560	Tropical Forest Soil	MTATLNFLSRITNEVFESQMQRVARKICERQHYFGGRTA
Ga0126371_121481482	3300021560	Tropical Forest Soil	MIATLKFLSRIADDVFESQMQRAARKICERQSYFGRLA
Ga0212123_100629332	3300022557	Iron-Sulfur Acid Spring	MIATLKFLNRITNEVFESQMQRAAQRICERQQYFVRRAA
Ga0224564_11264111	3300024271	Soil	MIAALKFLGRVTNEIFESRMQRAARKISERQHYFGRRAYS
Ga0209687_10948202	3300026322	Soil	MIATLKFLSRITDQVFEAQMQRAAQRICERQQYFVRRAA
Ga0209577_102603421	3300026552	Soil	MIATLKFLSRITDQVFESQMQRAAQRICERQQYFVRRAA
Ga0207817_10329152	3300026979	Tropical Forest Soil	MIAALRSLGQVTNEIFESQMQRAARKICEHQQYFGHRAS
Ga0208365_10015702	3300027070	Forest Soil	MTATLNFLSRITNEVFESRMQRAARKICERQHYFGSHAA
Ga0208604_10057841	3300027090	Forest Soil	TATLNFLSRITNEVFESRMQRAARKICERQHYFGTHTA
Ga0209528_10207492	3300027610	Forest Soil	MIATLKFLKRITNEVFESQMQRAAQRICERQQYFIRRVA
Ga0209117_10598742	3300027645	Forest Soil	MIATLKFLNRITNEVFESQMQRAAQRICERQQYFIRRVA
Ga0209073_101040372	3300027765	Agricultural Soil	MTATLNFLSRITNEVFQSQMQRAARKICERQHYFGRTA
Ga0209074_100765922	3300027787	Agricultural Soil	MTATLNFLSRITNEVFELQMQRVARKISERQHYFARTA
Ga0209068_109778872	3300027894	Watersheds	VTPMTATLKFLSRITNEVFESQMQRAAQKICERQHYFGGRAA
Ga0209583_108019742	3300027910	Watersheds	MTATLKFLSRITNEVFESQMQRAAQKICERQHYFGGRA
Ga0209168_102675772	3300027986	Surface Soil	MTTTLKFLSRLTNEVFEAQMQRAARKICERQHYFGAHTA
Ga0307482_12666271	3300030730	Hardwood Forest Soil	RDYRTGITPMTATLKFLSRITNEVFESQMQRAAQKICERQHYFGGRAA
Ga0170820_104434701	3300031446	Forest Soil	TMIATLKFLSRITDQVFESQMQRAAQRICERQQYFVRRAA
Ga0318516_1000053412	3300031543	Soil	MTATLKFLSRITNEVFESQMQRAAQRICKRQHYFARRAV
Ga0318534_105076001	3300031544	Soil	AMTATLKFLSRITNEVFESQMQRAAQRICKRQHYFARRAV
Ga0310915_100786994	3300031573	Soil	MTATLNFLSRITNEVFESQMQRAAREICERQHYFGGRAA
Ga0310915_105120392	3300031573	Soil	MTATLNFLSRITNEVFESRMQRAARKICERQHYFGGRAA
Ga0318542_100965312	3300031668	Soil	MTATLNFLSRITNEVFESQMQRAARKICERRHYFGGRAA
Ga0318561_104958571	3300031679	Soil	PMTATLNFLSRITNEVFESQMQRAARKICERQHYFGGRAA
Ga0318501_101997101	3300031736	Soil	MTATLQFLTRITNAVFESHMQRVAREICERQQYFGRVA
Ga0318502_107231352	3300031747	Soil	APGTGSTPMTATLNFLSRITNEVFESQMQRAAREICERQHYFGGRAA
Ga0307477_100437572	3300031753	Hardwood Forest Soil	MTATLNFLSRITNEVFESRMQRAARKICERQHYFGTHTA
Ga0318548_106392182	3300031793	Soil	MIATLKFLSRIADDVFESQMQRAARKICERQYYFGRPA
Ga0310917_107846941	3300031833	Soil	ATLNFLSRITNEVFESQMQRAARKICERRHYFGGRAA
Ga0318527_100917181	3300031859	Soil	GSTPMTATLNFLSRITNEVFESQMQRAAREICERQHYFGGRAA
Ga0306919_101060701	3300031879	Soil	MTATLNFLSRITNEVFESQMQRAARKICERQHYFGGRAA
Ga0318520_105682931	3300031897	Soil	MTATLNFLSRITNEVFESQMQRAARKICERRHYFGGRA
Ga0306921_100001522	3300031912	Soil	VTATLNFLSRITNQVFESQMQRAARRICERQQYFSRAA
Ga0306926_102347541	3300031954	Soil	TTMIATLKFLSRIADDVFESQMQRAARKICERQYYFGRPA
Ga0306926_104964532	3300031954	Soil	MTATLNFLSRITNEVFESQMRRAARKIRERQHYFGGRTT
Ga0306924_120400951	3300032076	Soil	VNGIRRYGAPLIATLKLLGRVTNEIFESQMQRAAKQISERQHYFVRRGR
Ga0307470_112872772	3300032174	Hardwood Forest Soil	MTATMNFLSRITNEVFESRMQRAARKICERQHYFGTHTA
Ga0306920_1000855443	3300032261	Soil	MIAAPRSLGQVTNEIFESMQRAARKICEHQQYFGHRAS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061143

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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