Metagenome / Metatranscriptome Family F061167

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061167
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	92 residues
Representative Sequence	VATASSGADALAMMRRQLFDALVMDCAQDTLDILNFTAKAQGLQPSLAVFLADEWGDELVTGLEELGHVLTMLEDDECARLAVESRLA
Number of Associated Samples	89
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.00 %
% of genes near scaffold ends (potentially truncated)	31.06 %
% of genes from short scaffolds (< 2000 bps)	58.33 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.273 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (12.879 % of family members)
Environment Ontology (ENVO)	Unclassified (39.394 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.485 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.48% β-sheet: 0.00% Coil/Unstructured: 40.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF11154	DUF2934	11.36
PF09364	XFP_N	8.33
PF13620	CarboxypepD_reg	6.82
PF03544	TonB_C	6.82
PF00072	Response_reg	3.03
PF03706	LPG_synthase_TM	3.03
PF06050	HGD-D	1.52
PF00691	OmpA	1.52
PF12831	FAD_oxidored	0.76
PF02734	Dak2	0.76
PF04055	Radical_SAM	0.76
PF16193	AAA_assoc_2	0.76
PF11645	PDDEXK_5	0.76
PF00903	Glyoxalase	0.76
PF16576	HlyD_D23	0.76
PF09335	SNARE_assoc	0.76
PF00069	Pkinase	0.76
PF01070	FMN_dh	0.76
PF13231	PMT_2	0.76
PF04185	Phosphoesterase	0.76
PF01370	Epimerase	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	6.82
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	3.03
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.03
COG1775	Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB	Amino acid transport and metabolism [E]	1.52
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.76
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.76
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.76
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.76
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.27 %
Unclassified	root	N/A	47.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.27 %
Unclassified	root	N/A	47.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.27 %
Unclassified	root	N/A	47.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	35.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.52 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	17.42 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.42 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.76 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.42 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.09 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.76 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.76 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.42 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.76 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.76 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.76 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.42 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.76 %
Pseudomonas stutzeri group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group	0.76 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.76 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.42 %
Pseudomonas stutzeri subgroup	species subgroup	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group → Pseudomonas stutzeri subgroup	0.76 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.76 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.76 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.42 %
Pseudomonas stutzeri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group → Pseudomonas stutzeri subgroup → Pseudomonas stutzeri	0.76 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.76 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.76 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101410245	Not Available	910	Open in IMG/M
3300000567\|JGI12270J11330_10128746	Not Available	1008	Open in IMG/M
3300000955\|JGI1027J12803_108088192	Not Available	521	Open in IMG/M
3300003219\|JGI26341J46601_10000063	All Organisms → cellular organisms → Bacteria	30127	Open in IMG/M
3300003368\|JGI26340J50214_10062891	Not Available	999	Open in IMG/M
3300004091\|Ga0062387_100980937	Not Available	646	Open in IMG/M
3300004152\|Ga0062386_100423946	Not Available	1074	Open in IMG/M
3300005435\|Ga0070714_100538197	All Organisms → cellular organisms → Bacteria → Acidobacteria	1117	Open in IMG/M
3300005436\|Ga0070713_100237128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1660	Open in IMG/M
3300005437\|Ga0070710_11453519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group → Pseudomonas stutzeri subgroup → Pseudomonas stutzeri	514	Open in IMG/M
3300005439\|Ga0070711_100953840	Not Available	734	Open in IMG/M
3300005554\|Ga0066661_10051856	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	2351	Open in IMG/M
3300005568\|Ga0066703_10013765	All Organisms → cellular organisms → Bacteria	3991	Open in IMG/M
3300005598\|Ga0066706_10877308	Not Available	701	Open in IMG/M
3300005995\|Ga0066790_10191756	Not Available	874	Open in IMG/M
3300006028\|Ga0070717_10036836	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3970	Open in IMG/M
3300006052\|Ga0075029_100001057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15767	Open in IMG/M
3300006052\|Ga0075029_100130071	Not Available	1534	Open in IMG/M
3300006059\|Ga0075017_100067945	All Organisms → cellular organisms → Bacteria	2427	Open in IMG/M
3300006059\|Ga0075017_101114518	Not Available	617	Open in IMG/M
3300006086\|Ga0075019_10483688	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300006086\|Ga0075019_10618778	Not Available	680	Open in IMG/M
3300006162\|Ga0075030_101048187	Not Available	642	Open in IMG/M
3300006174\|Ga0075014_100006302	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3860	Open in IMG/M
3300006174\|Ga0075014_100469711	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300006642\|Ga0075521_10011073	Not Available	3484	Open in IMG/M
3300007982\|Ga0102924_1006328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11150	Open in IMG/M
3300009632\|Ga0116102_1003278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6274	Open in IMG/M
3300009641\|Ga0116120_1056922	Not Available	1334	Open in IMG/M
3300010339\|Ga0074046_10000812	All Organisms → cellular organisms → Bacteria	28656	Open in IMG/M
3300010339\|Ga0074046_10017354	All Organisms → cellular organisms → Bacteria	5128	Open in IMG/M
3300010339\|Ga0074046_10027584	All Organisms → cellular organisms → Bacteria	3898	Open in IMG/M
3300010339\|Ga0074046_10189450	Not Available	1297	Open in IMG/M
3300010341\|Ga0074045_10259005	Not Available	1148	Open in IMG/M
3300010343\|Ga0074044_10782095	Not Available	623	Open in IMG/M
3300010379\|Ga0136449_100335890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2726	Open in IMG/M
3300010379\|Ga0136449_100569023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1942	Open in IMG/M
3300010379\|Ga0136449_101546774	Not Available	1012	Open in IMG/M
3300014489\|Ga0182018_10070597	All Organisms → cellular organisms → Bacteria → Acidobacteria	2088	Open in IMG/M
3300014491\|Ga0182014_10000048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	114591	Open in IMG/M
3300014491\|Ga0182014_10007989	All Organisms → cellular organisms → Bacteria	10937	Open in IMG/M
3300014491\|Ga0182014_10017654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6285	Open in IMG/M
3300014838\|Ga0182030_10999673	Not Available	736	Open in IMG/M
3300015373\|Ga0132257_101629230	Not Available	826	Open in IMG/M
3300015373\|Ga0132257_103350620	Not Available	583	Open in IMG/M
3300015374\|Ga0132255_100443971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1897	Open in IMG/M
3300015374\|Ga0132255_104016561	Not Available	624	Open in IMG/M
3300016750\|Ga0181505_10065339	All Organisms → cellular organisms → Bacteria	9718	Open in IMG/M
3300016750\|Ga0181505_11098791	Not Available	599	Open in IMG/M
3300017925\|Ga0187856_1002702	All Organisms → cellular organisms → Bacteria → Acidobacteria	12845	Open in IMG/M
3300017934\|Ga0187803_10067687	Not Available	1405	Open in IMG/M
3300017938\|Ga0187854_10038945	All Organisms → cellular organisms → Bacteria → Acidobacteria	2447	Open in IMG/M
3300017941\|Ga0187850_10020180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3854	Open in IMG/M
3300017941\|Ga0187850_10193843	Not Available	933	Open in IMG/M
3300017943\|Ga0187819_10131316	Not Available	1493	Open in IMG/M
3300017946\|Ga0187879_10060489	All Organisms → cellular organisms → Bacteria	2213	Open in IMG/M
3300017948\|Ga0187847_10001300	All Organisms → cellular organisms → Bacteria → Acidobacteria	22908	Open in IMG/M
3300017955\|Ga0187817_10418650	Not Available	855	Open in IMG/M
3300017972\|Ga0187781_10054206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2758	Open in IMG/M
3300017972\|Ga0187781_10185390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1466	Open in IMG/M
3300017972\|Ga0187781_10902945	Not Available	643	Open in IMG/M
3300017972\|Ga0187781_11097916	Not Available	583	Open in IMG/M
3300017975\|Ga0187782_10009572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7149	Open in IMG/M
3300018030\|Ga0187869_10021056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3722	Open in IMG/M
3300018037\|Ga0187883_10027721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3090	Open in IMG/M
3300018040\|Ga0187862_10342742	Not Available	931	Open in IMG/M
3300018040\|Ga0187862_10508223	Not Available	724	Open in IMG/M
3300018062\|Ga0187784_10060311	All Organisms → cellular organisms → Bacteria	3074	Open in IMG/M
3300018062\|Ga0187784_10159987	All Organisms → cellular organisms → Bacteria → Acidobacteria	1839	Open in IMG/M
3300018062\|Ga0187784_10247660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1450	Open in IMG/M
3300018062\|Ga0187784_10395784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1117	Open in IMG/M
3300018062\|Ga0187784_10660155	Not Available	838	Open in IMG/M
3300018085\|Ga0187772_10486689	Not Available	868	Open in IMG/M
3300018085\|Ga0187772_11304378	Not Available	537	Open in IMG/M
3300018086\|Ga0187769_10027823	All Organisms → cellular organisms → Bacteria → Acidobacteria	3811	Open in IMG/M
3300018086\|Ga0187769_10318535	Not Available	1164	Open in IMG/M
3300018088\|Ga0187771_10057994	All Organisms → cellular organisms → Bacteria	3033	Open in IMG/M
3300018090\|Ga0187770_10153343	Not Available	1756	Open in IMG/M
3300018090\|Ga0187770_10927270	Not Available	699	Open in IMG/M
3300019787\|Ga0182031_1292712	Not Available	1253	Open in IMG/M
3300020580\|Ga0210403_10022115	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5079	Open in IMG/M
3300020581\|Ga0210399_10986200	Not Available	679	Open in IMG/M
3300021478\|Ga0210402_10084077	All Organisms → cellular organisms → Bacteria	2836	Open in IMG/M
3300021861\|Ga0213853_10956197	Not Available	1557	Open in IMG/M
3300022557\|Ga0212123_10008428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15721	Open in IMG/M
3300022881\|Ga0224545_1000650	All Organisms → cellular organisms → Bacteria	7391	Open in IMG/M
3300023090\|Ga0224558_1000011	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	247018	Open in IMG/M
3300023090\|Ga0224558_1004817	All Organisms → cellular organisms → Bacteria	10253	Open in IMG/M
3300023090\|Ga0224558_1005753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8923	Open in IMG/M
3300023090\|Ga0224558_1012049	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5094	Open in IMG/M
3300023090\|Ga0224558_1154618	Not Available	732	Open in IMG/M
3300025878\|Ga0209584_10163767	Not Available	841	Open in IMG/M
3300025915\|Ga0207693_10510553	Not Available	938	Open in IMG/M
3300025915\|Ga0207693_11295686	Not Available	545	Open in IMG/M
3300025916\|Ga0207663_10359688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1104	Open in IMG/M
3300025929\|Ga0207664_10245967	All Organisms → cellular organisms → Bacteria → Acidobacteria	1559	Open in IMG/M
3300025929\|Ga0207664_10719706	Not Available	898	Open in IMG/M
3300026309\|Ga0209055_1202005	Not Available	608	Open in IMG/M
3300026317\|Ga0209154_1222307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300027783\|Ga0209448_10114508	Not Available	903	Open in IMG/M
3300027812\|Ga0209656_10001861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13761	Open in IMG/M
3300027812\|Ga0209656_10043786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2572	Open in IMG/M
3300027825\|Ga0209039_10033970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2432	Open in IMG/M
3300027854\|Ga0209517_10092493	Not Available	2062	Open in IMG/M
3300027905\|Ga0209415_10935248	Not Available	585	Open in IMG/M
3300027911\|Ga0209698_10026801	All Organisms → cellular organisms → Bacteria → Acidobacteria	5347	Open in IMG/M
3300027911\|Ga0209698_10593353	Not Available	852	Open in IMG/M
3300027911\|Ga0209698_10668316	Not Available	793	Open in IMG/M
3300027915\|Ga0209069_10388506	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	762	Open in IMG/M
3300029903\|Ga0247271_103172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3400	Open in IMG/M
3300029922\|Ga0311363_10610598	Not Available	1065	Open in IMG/M
3300030659\|Ga0316363_10012977	All Organisms → cellular organisms → Bacteria	4842	Open in IMG/M
3300031226\|Ga0307497_10413120	Not Available	647	Open in IMG/M
3300031718\|Ga0307474_11029204	Not Available	652	Open in IMG/M
3300031720\|Ga0307469_11363171	Not Available	675	Open in IMG/M
3300032160\|Ga0311301_11107681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1029	Open in IMG/M
3300032782\|Ga0335082_10025389	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6331	Open in IMG/M
3300032805\|Ga0335078_12324983	Not Available	560	Open in IMG/M
3300032829\|Ga0335070_10005240	All Organisms → cellular organisms → Bacteria → Acidobacteria	15224	Open in IMG/M
3300032829\|Ga0335070_11451492	Not Available	626	Open in IMG/M
3300032893\|Ga0335069_10058648	All Organisms → cellular organisms → Bacteria → Acidobacteria	5005	Open in IMG/M
3300032893\|Ga0335069_10531294	Not Available	1359	Open in IMG/M
3300032893\|Ga0335069_11113563	Not Available	869	Open in IMG/M
3300032897\|Ga0335071_10002674	All Organisms → cellular organisms → Bacteria	18949	Open in IMG/M
3300033402\|Ga0326728_10000012	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	850090	Open in IMG/M
3300033402\|Ga0326728_10004025	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	44261	Open in IMG/M
3300033402\|Ga0326728_10023897	All Organisms → cellular organisms → Bacteria	11136	Open in IMG/M
3300033402\|Ga0326728_10255537	Not Available	1662	Open in IMG/M
3300033402\|Ga0326728_10908267	Not Available	623	Open in IMG/M
3300033405\|Ga0326727_10089454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4182	Open in IMG/M
3300033405\|Ga0326727_10261203	Not Available	1769	Open in IMG/M
3300033982\|Ga0371487_0035759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3079	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.97%
Host-Associated	Host-Associated	3.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.91%
Aquatic	Environmental → Aquatic	31.06%
Plants	Host-Associated → Plants	3.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.55%
Freshwater	Environmental → Aquatic → Freshwater	19.70%
Peat	Environmental → Terrestrial → Peat	11.36%
Sediment	Environmental → Aquatic → Sediment	9.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.03%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.52%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	28.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	18.18%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.85%
Loam	Environmental → Terrestrial → Soil → Loam	7.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.03%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	23.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.15%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.30%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.03%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.27%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.52%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.52%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.52%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	12.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	9.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.09%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.06%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.06%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.06%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	6.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.30%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	4.55%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	4.55%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.03%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.27%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.52%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.52%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.52%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.52%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.76%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.76%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1014102451	3300000364	Soil	VATASMAADALAMMRRRIFDVLVMDCARDTLNIQNFTANAQGLQPSLALFLADEWGDDLATGLEEFGDVLTMLEDDECARLAVESRMG*
JGI12270J11330_101287462	3300000567	Peatlands Soil	MMRQRRHDVVTTSRRADALAMMRGQSFDALVMDCAQDXVDILNFTAKAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEFARLKVESLMA*
JGI1027J12803_1080881922	3300000955	Soil	MRRRIFDVLVMDCARDTLNIQNFTANAQGLQPSLALFLADEWGDDLATGLEEFGDVLTMLEDDECARLAVESRMG*
JGI26341J46601_100000633	3300003219	Bog Forest Soil	MATASSGADALAMMRRQIFDVLVMDCAQDTLDIQKFTAKAQGLQPSLAVFLADEWGDELANGLEELGNVLTMLEDDERVRLAVESEIA*
JGI26340J50214_100628912	3300003368	Bog Forest Soil	VTTSRRADALAMMRGQSFDALVMDCAQDTLDIVSFTARAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEFARLKVESLMA*
Ga0062387_1009809371	3300004091	Bog Forest Soil	VPNKYVDMMRQRGHDVVTTSRSADALAMMRGQSFDALVMDCAQDTVDILDFTAKAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEFARLKVESLMA*
Ga0062386_1004239461	3300004152	Bog Forest Soil	QRGHDVATASSGTDALAMMRRQIFDAFVMDCAHDTLDILNFTAKAQGLQPSLAVFLADEWGDELLTGLEELGHVLTMLEDDECVRLSVESRIV*
Ga0070714_1005381972	3300005435	Agricultural Soil	DPGSVHGKNVEIIRQRGHDVATASSRADAFAMMRRQVFDALVIDCAQDTLDIQNFTAQAQGLQPSVAVFLSEDWVDELALCLEEFGYVLTMSADDECARLTIESRMA*
Ga0070713_1002371283	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RRQVFDALVIDCAQDTLDIQNLVTKAQGLQPSVAVFLSEDWGDELALCLEEFGYVLTMSADDECARLTIESRMA*
Ga0070710_114535191	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	CESVHAKYVDIIRQQGHDVTTASSGAHALVLMRRRIFDVLVMDCAQDTLDIQNFTAKAQGLQPSLAVFLADEWGDELVTGLGEFGHVLTMLEDDECARLAAESRIG*
Ga0070711_1009538402	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ESVHAKYVDIIRQQGHDVTTASSGAHALELMRRQIFDVLVMDCAQDTLDIQNFTAKAQGLQPSLAVFLADEWGDELVTGLGEFGHVLTMLEDDECARLAAESRIG*
Ga0066661_100518563	3300005554	Soil	VEAASSGADAFIIMRRQIFDALVMDCAQDTLDIQNFTAKAQGLQPSLALFFADEWGDELATGLEELGHVLTMLEDDGCARLAVQSRMA*
Ga0066703_100137651	3300005568	Soil	QIFDALVMDCAQDTLDIQNFTAKAQGLQPSLALFFADEWGDELATGLEELGHVLTMLEDDGCARLAVQSRMA*
Ga0066706_108773081	3300005598	Soil	TKILYFNPESVYGKYVDVIRPRGHDVEAASSGADAFIIMRRQIFDALVMDCAQDTLDIQNFTAKAQGLQPSLALFFADEWGDELATGLEELGHVLTMLEDDGCARLAVQSRMA*
Ga0066790_101917562	3300005995	Soil	VTTASSGPDTFAMMRRQIFDILVMDCAQDTLDILNFTAKAQGLQPSLAVFLADEWGDELVTGVEEFGHVLTMLEDDECAMLAVESQMA*
Ga0070717_100368364	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VATASSRADAFAMMRRQVFDALVIDCAQDTLDIQNFTAQAQGLQPSVAVFLSEDWVDELALCLEEFGYVLTMSADDECARLTIESRMA*
Ga0075029_10000105720	3300006052	Watersheds	VVTTTKGADALALMRRQSFDALVMDFTQETVDILNFTTKACGLQPSLAVFLADEWGDELTTGLEELSHVLMMLEDDELARLKVESQTACQ*
Ga0075029_1001300713	3300006052	Watersheds	MMRQRGHEVLTTTTVAEALAIMRKLSFDALVMDCAQDTLDIVSFTARAHGLQPSLALFFADEWGDELATGLEELTHVLTMLEDDEFVRLKVESLMA*
Ga0075017_1000679452	3300006059	Watersheds	VTASSGVDALAMMRRQIFDALVMDCAQDRLDILNFTAKAQGLQPSLAVFLADEWGDELITSLEDLGHVLTMLEDDECARLAVESR*
Ga0075017_1011145182	3300006059	Watersheds	VLTTTTVAEALAIMRKLSFDALVMDCAQDTLDIVSFTARAHGLQPSLGVFLTHEWGDELATGLEELTHVLTMLEDDEFVRLKVESLMA*
Ga0075019_104836882	3300006086	Watersheds	VVTASSGVDALAMMRRQIFDALVMDCAQDRLDILNFTAKAQGLQPSLAVFLADEWGDELATGLEELGHVLTMLEDDECARLAVESRIAACPSP*
Ga0075019_106187782	3300006086	Watersheds	MRQRGHDVVTTSRCADALAMMRGQSFDAFVMDCAQDAVDILNFTVKAHGLQPSLAVFLADEWGDDLATGLEELTHVLTMLEDDEFARLEVESLMA*
Ga0075030_1010481872	3300006162	Watersheds	VATASSSADALAMMRGQIFDVLVMDCTQDTLDIQNFTAKAQGLQPSLAVFLADEWGDELVSGLEELGHVLTMLEDDECARLAVESRMT*
Ga0075014_1000063026	3300006174	Watersheds	MRERGHNVVTTTKGADALALMRRQSFDALVMDFTQETVDILNFTTKACGLQPSLAVFLADEWGDELTTGLEELSHVLMMLEDDELARLKVESQTACQ*
Ga0075014_1004697112	3300006174	Watersheds	VVTASSGVDALAMMRRQIFDALVMDCAQDRLDILNFTAKAQGLQPSLAVFLADEWGDELVTGFEELGHVLMMLEDDEDVPGLPLRAGWRDAER*
Ga0075521_100110731	3300006642	Arctic Peat Soil	LYFNPESVHGKYVDIIRQRGHDVTTASSGPDTFAMMRRQIFDVLVMDCAQDTLDILNFTAKAQGLQPSLAVFLADEWGDELVTGVEEFGHVLTMLEDDECAMLAVESQMA*
Ga0102924_10063282	3300007982	Iron-Sulfur Acid Spring	MRRQIFDAIVIDCAQDTLDMQHFTAKAQGLQPSLAVFLADEWGDELASGLEELGHLLTMLEDDECALLV*
Ga0116102_10032787	3300009632	Peatland	MRERGHNVVTTTKGTDALALMRRQSFDALVMDFTQETVDIINFTTKACGLQPSLAVFLADEWGDELATGLEELSHVLTMLEDDELARLKVESRTA*
Ga0116120_10569222	3300009641	Peatland	VVTASSGVDALAMMRRQIFDALVIDCAQDSLDIQNFTARAQGLQPSLAVFLADEWGDELATGMEELGHVLTMLEDDECARLAVESR*
Ga0074046_1000081223	3300010339	Bog Forest Soil	MTILYLNPEPIPSKCVDTLRERGHNVVTTSKGADALALMRRQCFDALVMDFTQETVDILNFATKACGLQPSLAVFLADEWGDELATGLEELSRVLAMLEDDELARLKVESRTA*
Ga0074046_100173544	3300010339	Bog Forest Soil	MMRQRGHDVVTTSRSADALAMMRGQSFDALVMDCAQDTVDILDFTAKAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEFARLKVESLMA*
Ga0074046_100275843	3300010339	Bog Forest Soil	VAATSSGVDALAMMRRQIFDALVIDCAPDRLDIQNFTAKAQGLQPSLAVFLADEWGDELVIGLEELGHVLTMLEDDECAMLAVESR*
Ga0074046_101894502	3300010339	Bog Forest Soil	MLRQRGHDVVTTRRRADALAMMRGQTFDALVMDCAQDAVDILNFTAKAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEFARLKVESLMV*
Ga0074045_102590051	3300010341	Bog Forest Soil	RQRGHDVAATSSGVHALAMMRRQIFDALEIDCAPDRLDIQNFTAKAQGLQPSLAVFLADEWGDELVTGLEELGHVLTMLEDDECAMLAVESR*
Ga0074044_107820952	3300010343	Bog Forest Soil	MMRQRGHDVVTTSRSADALAMMRGQSFDALVMDCAQDTVDILDFTAKAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDE
Ga0136449_1003358901	3300010379	Peatlands Soil	VVVASSGVDALAMMRRQIFDALVIDCAPDRLDIQNFTAKAQGLQPSLAVFLADEWGDELVTGLEELGHVLTMLEDDECAMLA
Ga0136449_1005690233	3300010379	Peatlands Soil	MMRQRRHDVVTTSRRADALAMMRGQSFDALVMDCAQDAVDILNFTAKAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEFARLKVESLMA*
Ga0136449_1015467741	3300010379	Peatlands Soil	LAMMRRQIFDVLVMDCAQDTLDILNFTAKAQGLQPSLAVFFADEWGDELVAGLEELGHVLTMLEDDECARLAIESRIAACSSPASS*
Ga0182018_100705976	3300014489	Palsa	MRERGHNVVTTTKGADALALMRRQSFDALVMDFTQETVDIINFTTKACGLQPSLAVFLADEWGDELATGLEELSHVLTMLEDDELARLKVESRTA*
Ga0182014_1000004881	3300014491	Bog	MKILYFDPESVHGKYIKILRQRGHDVATASSCADAFAMMRRQVFDVLVMDCAQDTLDILNFTAKAHGLQPLLAVFLGDEWGDELVTGLEELRNVLTMLEDDECARLAVEGRMA*
Ga0182014_100079897	3300014491	Bog	VATASSGSGALAIMRRQIFDALVMDCAQDRLDILNFTAKAQGLQPSLAVFLADEWGDELATGLEELGHVLTMLEDDECARLAVESRTG*
Ga0182014_100176546	3300014491	Bog	MMRQRGHDVVTTSRRADALAMMRGQSFDALVMDGAQDAVDILNFTAKAHGLQPSLAVFLADEWGDELATGLEEFTHVLTMLEDDEFARLKVESLMA*
Ga0182030_109996731	3300014838	Bog	YFNPESVHGKYVDIIRQRGHDVATASSGIDALAMMHRQIFDALVMDCPQDTLDIVSFTARAHGLQPSLAVFLADEWGAELATGLEELTHVLTMLEDDEFARLKVESLMA*
Ga0132257_1016292301	3300015373	Arabidopsis Rhizosphere	VATASIAADALAMMRRRIFDVLVMDCARDTLDIQNFTAKAQGLQPSLALFLADEWGDDLATGLEEFGDVLTMLEDDECARLAVESRMG*
Ga0132257_1033506202	3300015373	Arabidopsis Rhizosphere	ESVDSKYVDIIRERGHDQATASIGADALAMMRRQLFDALVMDCPQDTLDIQTFTAKAQGLQPSLAVFLADEWGDELITGLEEFGHVLTMLEDDECARLAVESRMA*
Ga0132255_1004439712	3300015374	Arabidopsis Rhizosphere	VATAISGADAFAMMRRQIFDALVMDCAQDTLDIQNFTAKAQGLQPSLAVFLADEWGDELVTGLEEFGHVLTMLEDDECARLAVESRMG*
Ga0132255_1040165611	3300015374	Arabidopsis Rhizosphere	RFGEGVRTKVIYFNPESVHSKYVDIIRQQGHDVATASIAADALAMMRRRIFDVLVMDCARDTLDIQNFTAKAQGLQPSLALFLADEWGDDLATGMEEFGDVLTMLEDDECARLAVESRMG
Ga0181505_100653396	3300016750	Peatland	MMRQRGHDVVTTSRPADALAMMRGQTFDALVMDCAQDAVDIVSFTARAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEFARLKVESLMA
Ga0181505_110987911	3300016750	Peatland	TTSRPADALAMMRGQSFDALVMDCAQDAVDIVNFTAKAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEFAMLGVESLMA
Ga0187856_10027027	3300017925	Peatland	VVTTTKGTDALALMRRQSFDALVMDFTQETVDIINFTTKACGLQPSLAVFLADEWGDELATGLEELSHVLTMLEDDELARLKVESRTA
Ga0187803_100676873	3300017934	Freshwater Sediment	MMRQRGHDVVTTSRRADALAMMRGQSFDALVMDCAQDTVDILKFTAKAHGLQPSLAVFFADEWGDELATGLEELTHVLTMLEDDEFARLKVESLMA
Ga0187854_100389453	3300017938	Peatland	VVTTTKGTDALALMRRQSFDALVMDFTQETVDILNFTTKACGLQPSLAVFLADEWGDELATGLEELSHVLTMLEDDELARLKVESRTA
Ga0187850_100201804	3300017941	Peatland	VVTASSGVDALAMMRRQIFDALVIDCAQDSLDIQNFTARAQGLQPSLAVFLADEWGDELATGMEELGHVLTMLEDDECARLAVESR
Ga0187850_101938432	3300017941	Peatland	VVTTTKGTDALALMRRQSFDALVMDFTQETVDIINFTTKACGLQPSLAVFLADEWGDELATGLEELSHVLTMLEDD
Ga0187819_101313162	3300017943	Freshwater Sediment	MKILYFNPELVDGKYVDIIRQRGHDVATASIGADALAMMSGQSFDALVMDCAQDTMDIQNFTAKAHGLQPSLAVFLADEWGDELATGLEELTQVLTMLEDDEFARLKVESLMA
Ga0187879_100604892	3300017946	Peatland	VVTTTKGTDALALMRRQSFDALVMDFTQETVDIINFTTKACGLQPSLAVFLADEWGDELATGLEELSHVLMMLEDDELARLKVESPIACQ
Ga0187847_1000130020	3300017948	Peatland	MWATASSGADTLAMMRGQIFNALVMDSGQDRLDIQNFTAKAQGLQPSLAVFLVDEWGDELVTGLEELGHELTMLEECAMLAVEPDSCLSIARS
Ga0187817_104186502	3300017955	Freshwater Sediment	VATASIGADALAMMSGQSFDALVMDCVQDTVDILNFTARAHGLQPSLAVFLADEWGNELATGLEELTHVLTMLEDDEFARLEVESLRV
Ga0187781_100542063	3300017972	Tropical Peatland	VATASSGTDALAMMRNQIFDVLVMDCAQDTLDTLNFTAKAQGLQPSLAVFLADEWGEELATGLEELGHVLTMLEDDECARLAVESQRA
Ga0187781_101853902	3300017972	Tropical Peatland	MIRQRGHDVATTSTGAEALAMMRKQCFDALVMDCAQDTVDIVNITTKAHGLQPSLAVFLADEWGDELTTGLEELTHVLTMLEDDEFARLKVQSLMA
Ga0187781_109029451	3300017972	Tropical Peatland	VLTTTTGVEALAIMRKLSFDALVIDCPQDTLDILNLTTRAHGLQPSLAVFLADEWGDELATGLEDLTHVLTMLEDDEFAMMKTESSMV
Ga0187781_110979161	3300017972	Tropical Peatland	IIRGRGHDVATASSGADALAMMRRQIFDVLVMDCAQDTLDTLNLTAKAQGLQPSLAVFLADEWGEELPTGLEELGHVLTMLEDDECARLAVENQRV
Ga0187782_100095723	3300017975	Tropical Peatland	MMRRQCFDALVMDCAQDTVDILNFTTKAHGLQPSLAVFLADEWGDELATGLEDLTHVLTMLEDDEFARLKVGSVMA
Ga0187869_100210561	3300018030	Peatland	DALAMMRRQIFDALVIDCAQDSLDIQNFTARAQGLQPSLAVFLADEWGDELATGMEELGHVLTMLEDDECARLAVESR
Ga0187883_100277211	3300018037	Peatland	MRERGHNVVTTTKGTDALALMRRQSFDALVMDFTQETVDILNFTTKACGLQPSLAVFLPDEWGDELATGLEELSHVLMMLEDDELARL
Ga0187862_103427421	3300018040	Peatland	VVTTTKGTDALALMRRQSFDALVMDFTQETVDILNFTTKACGLQPSLAVFLADEWGDELATGLEELSHVLMMLEDDELARLSSLWCKSGT
Ga0187862_105082232	3300018040	Peatland	YLNIIRQRGHDVVTASSGVDALAMMRRQIFDALVIDCAQDSLDIQNFTARAQGLQPSLAVFLADEWGDELATGMEELGHVLTMLEDDECARLAVESR
Ga0187784_100603115	3300018062	Tropical Peatland	MMRQRGHEVVTTSTAGDALAIMRRRSFDALVIDGEQDTVDVVLLTGKAQGLQPSLAVFLADEWGDELATGLEELIHVLAMLEDDEFARLKVEARMA
Ga0187784_101599873	3300018062	Tropical Peatland	VATASSGTDALAMMRNQIFDVLVMDCAQNTVDTLNFTAKAQGLQPSLAVFLADEWGEELATGLEELGHVLTMLEDDECARLAVESQRA
Ga0187784_102476601	3300018062	Tropical Peatland	VLTTTTGAEALSIMRQLSFDALVIDCPQDTVDILNFTAKAHGLQPSLAVFLADEWGDELATGLEDLTHVLTMLEDDEFAMLKMESLMV
Ga0187784_103957843	3300018062	Tropical Peatland	MRLQGHQVLTTTTGIEALAIMRKLSFDALVIDCPQDTVDILNLTTRAHGLQPSLAVFLADEWGDELATGLEDLTHVLTMLEDDEFAMMKTESLMV
Ga0187784_106601553	3300018062	Tropical Peatland	GLDVVTTSCSTDALAMMRTQIFDALVIDCAQDMLDIVNFTAKSQGLQPSLAVFHADEWGEELATGLEELAHVLTMVLDDEFARLAVESQRAYAER
Ga0187772_104866891	3300018085	Tropical Peatland	VLTTTTGVEALAIMRKLSFDALVIDCPQDTVDILNLTTKAHGLQPSLAVFLADEWGDELATGLEDLTHVLTMLEDDEFAMLKTESLMV
Ga0187772_113043781	3300018085	Tropical Peatland	MRGQSFDALVMECAQETVDIPGFTSKAHGLQPSLAVFLADEWGDELATGLEELVHVLTMLEDDEFARLKVESLVASGYAAQQ
Ga0187769_100278234	3300018086	Tropical Peatland	VATASSGTDALAMMRKQIFDVLVMDCAQDTLDTLNFTAKAQGLQPSLAVFLADEWGEELATGLEELGHALTMLEDDECARLAVESQRA
Ga0187769_103185352	3300018086	Tropical Peatland	MRQRGHEVVTTSTAGDALAIMRRQSFDALVIDCEQDTVDVVLLTGKAQGLQPSLAVFLADEWGDELATGLEELIHVLAMLEDDEFARLKVEARMA
Ga0187771_100579942	3300018088	Tropical Peatland	MMRQRGHEVVTTSTAGDALAIMRRQSFDALVIDCEQDTVDVVLLTGKAQGLQPSLAVFLADEWGDELATGLEELIHVLAMLEDDEFARLKVEARMA
Ga0187770_101533433	3300018090	Tropical Peatland	MMRQRGHEVVTTSTAGDALAIMRRQSFDALVIDCEQDTVDVVLLTGKAQGLQPSLAVFLADEWGDELATGLEELIHVLAMLEDD
Ga0187770_109272701	3300018090	Tropical Peatland	VATTSSRADAFALMRRQIFDALVMDCAQDTLDTLNFTTKAQGLQPSLAVFLADEWGPELATGLEELGHVLTMLEDDECARLAVESRIV
Ga0182031_12927122	3300019787	Bog	VATASSGIDALAMMHRQIFDALVMDCAQDTLDILAFTAKAQGLQPSLAVFLADEWGDELLPGLEALGHVLTMLEDDECAMLAVESRMA
Ga0210403_100221155	3300020580	Soil	VATTSNSADALAMMRSQIFDALVIDSAQDMLDIQNFTAKAQGLQPSLAVFLADEWGDELAAGLEEFGHVLTMLEDDECARIAVESRSIHAAQQRLAF
Ga0210399_109862001	3300020581	Soil	IRQRGHDVATASSASDALAMMRRQIFDALVMDCAQDMLDIQNFTAMAQGLQPSIAVFLDDDWGDELVTGLGEFGHVLTMLEDDECARLAVESRSIHAAQQ
Ga0210402_100840773	3300021478	Soil	MKILFFNPESVHGRYVDVIRHRGHDVATASSGADALAMMHGQIFDALVMDSAQEAVDILNFTAKAHGLQPSLAVFLADEWGDELATGLEELTHVLKMLEDDEFARLEVESLMA
Ga0213853_109561973	3300021861	Watersheds	VVTTTKGADALALMRRQSFDALVMDFTQETVDILNFTTKACGLQPSLAVFLADEWGDELTTGLEELSHVLMMLEDDELARLKVESQTACQ
Ga0212123_100084283	3300022557	Iron-Sulfur Acid Spring	MRRQIFDAIVIDCAQDTLDMQHFTAKAQGLQPSLAVFLADEWGDELASGLEELGHLLTMLEDDECALLV
Ga0224545_100065011	3300022881	Soil	VVTTTKGADALALMRRQSFDALVMDFTQETVDIINFTTKACGLQPSLAVFLADEWGDELATGLEELSHVLTMLEDDELARLKVESRTA
Ga0224558_1000011197	3300023090	Soil	MKILYFDPESVHGKYIKILRQRGHDVATASSCADAFAMMRRQVFDVLVMDCAQDTLDILNFTAKAHGLQPLLAVFLGDEWGDELVTGLEELRNVLTMLEDDECARLAVEGRMA
Ga0224558_10048173	3300023090	Soil	MMRGQSFDALVMDGAQDAVDILNFTAKAHGLQPSLAVFLADEWGDELATGLEEFTHVLTMLEDDEFARLKVESLMA
Ga0224558_100575310	3300023090	Soil	VVATNRPADALAMMRGQCFDALVMDCAQDAVDILNFTVKAHGLQPSLAVFLADEWGDDLATGLEELTHVLTMLEDDEFARLEVESLMA
Ga0224558_10120496	3300023090	Soil	VATASSGSGALAIMRRQIFDALVMDCAQDRLDILNFTAKAQGLQPSLAVFLADEWGDELATGLEELGHVLTMLEDDECARLAVESRTG
Ga0224558_11546181	3300023090	Soil	MMRQRGHDVVTTSRGADALAMMRGQSFDALVMDCPQDTLDIVSFTARAHGLQPSLAVFLADEWGAELATGLEELTHVLTMLEDDEFARLKVESLMA
Ga0209584_101637671	3300025878	Arctic Peat Soil	ILYFNPESVHGKYVDIIRQRGHDVTTASSGPDTFAMMRRQIFDVLVMDCAQDTLDILNFTAKAQGLQPSLAVFLADEWGDELVTGVEEFGHVLTMLEDDECAMLAVERQMA
Ga0207693_105105532	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VATASSGADALAMMRRQIFDALVIDSAQDMLDIQNFTAKAQGLQPSLAVFLADEWGDELAAGLEEFGHVLTMLEDDECARLAVESRSIHAAQQ
Ga0207693_112956862	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RRPIFDALVMDCEQDTLDILNFTAKAQGLQPSLAVFLADEWGDELVTGLEELGHVLTMLEDDECARLAVESRMA
Ga0207663_103596882	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSASSGAHALELMRRQIFDVLVMDCAQDTLDIQNFTAKAQGLQPSLAVFLADEWGDELVTGLGEFGHVLTMLEDDECARLAAESRIG
Ga0207664_102459672	3300025929	Agricultural Soil	TEANCVREPVGGVRTKILYFDPESVHGKNVDIIRQRGHDVATASSRADAFAMMRRQVFDALVIDCAQDTLDIQNFTAQAQGLQPSVAVFLSEDWVDELALCLEEFGYVLTMSADDECARLTIESRMA
Ga0207664_107197061	3300025929	Agricultural Soil	LYFNPESVHGKYVDIIRQRGHDVANASSAAHALAMMRKRIFDVVVMDCARDTLDIQNFTAKVQGLQPSLALFLADEWGDDLATGLEEFGDVLKMLEDDECARLAVESRMG
Ga0209055_12020051	3300026309	Soil	VEAASSGADAFIIMRRQIFDALVMDCAQDTLDIQNFTAKAQGLQPSLALFFADEWGDELATGLEELGHVLTMLEDDGCARLAVQSRMA
Ga0209154_12223072	3300026317	Soil	VEAASSGADAFIIMRRQIFDALVMDCAQDTLDIQNFTAKAQGLQPSLALFFADEWGDELATGLEELGHVLTMLEDDGCARL
Ga0209448_101145081	3300027783	Bog Forest Soil	RQRGHDVVTTSRSADALAMMRGQSFDALVMDCAQDTVDILDFTAKAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEFAMLEVESLMA
Ga0209656_1000186116	3300027812	Bog Forest Soil	MATASSGADALAMMRRQIFDVLVMDCAQDTLDIQKFTAKAQGLQPSLAVFLADEWGDELANGLEELGNVLTMLEDDERVRLAVESEIA
Ga0209656_100437864	3300027812	Bog Forest Soil	MMRQRGHDLVTTSRRADALAMMRGQSFDALVMDCAQDTLDIVSFTARAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEFARLKVESLMA
Ga0209039_100339703	3300027825	Bog Forest Soil	MMRQRGHDVVTTSRRADALAMMRGQSFDALVMDCAQDTVDILNFTAKAHGLQPSVAVFLADEWGDELATGLEELGHVLTMLEDDEFARLKVESLMA
Ga0209517_100924933	3300027854	Peatlands Soil	VVTTSRRADALAMMRGQSFDALVMDCAQDAVDILNFTAKAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEFARLKVESLMA
Ga0209415_109352481	3300027905	Peatlands Soil	MMRQRRHDVVTTSRRADALAMMRGQSFDALVMDCAQDAVDILNFTAKAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLED
Ga0209698_100268017	3300027911	Watersheds	MMRQRGHEVLTTTTVAEALAIMRKLSFDALVMDCAQDTLDIVSFTARAHGLQPSLGVFLTHEWGDELATGLEELTHVLTMLEDDEFVRLKVESLMA
Ga0209698_105933532	3300027911	Watersheds	HDVVTTSRRADALALMRGQSFDALVMDCAQDAVDIMNFTAKAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEFARLEVESLMA
Ga0209698_106683161	3300027911	Watersheds	VATASSSADALAMMRGQIFDVLVMDCTQDTLDIQNFTAKAQGLQPSLAVFLADEWGDELVSGLEELGHVLTMLEDDECARLAVESRMT
Ga0209069_103885062	3300027915	Watersheds	MMRRQIFDALVMDCAQDTLDIQNFTAKAQGLQPSLAVFLADEWGDELVTGLGEFGHVLTMLEDDECARLAAESRIG
Ga0247271_1031723	3300029903	Soil	MMRQRGHDVVTTSRHADALAMMRGQSFDALVMDCAQDAVDILNFTAKAHSLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEFAMLKVESLMA
Ga0311363_106105982	3300029922	Fen	VATASSGADALAMMRRQIFDVLVMDCAQDTLDILNFTAKAQGLQPSLAVFLADEWGDELATGLEELGHVLTMLEDDECARLAVENRIV
Ga0316363_100129774	3300030659	Peatlands Soil	MMRQRGHDVVTTSRRVDALAMMRGQSFDALVMDCAQDTVDILNFTAKAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEFARLKVESLMA
Ga0307497_104131202	3300031226	Soil	VTTPSSGTHALVLMRRQIFDVLVMDCALDTLDVQHFTAKAQGLQPSLAVFHAGEWGDELVTGLGEFGHVLTMLEDDECARLAAESRIG
Ga0307474_110292041	3300031718	Hardwood Forest Soil	VATASSGADALAMMRRQLFDALVIDCAQDALDIQTFTAKAQGLQPSLAVFLADEWGDELVTGLEEFEHVLTILEDDECARLGAESRIG
Ga0307469_113631712	3300031720	Hardwood Forest Soil	PESVHGKHVDIIRRRGHDVATASSGADALAMMRRQLFDALVIDCAQDALDIQTFTAKAQGLQPSLAVFLADEWGDELVTGLEEFEHVLTMLEDDECARLGAESRIG
Ga0311301_111076813	3300032160	Peatlands Soil	VVASSGVDALAMMRRQIFDALVIDCAPDRLDIQNFTAKAQGLQPSLAVFLADEWGDELVTGLEELGHVLTMLEDDECA
Ga0335082_100253896	3300032782	Soil	MMRRQIFDALVIDCAHDTLDILNFTAKAQGLQPSLAVFLADEWGDDLATGLEEFAHVLTMLEDDECARLAVEQRTA
Ga0335078_123249831	3300032805	Soil	FNPEPVRGKCVNLFRLRGQDVFTASTGTEALAMMRRQIFDALVMDCAEDTLNILNFTAKAQGLQPSLAVFLADDWGDELGTGLEELGHVLTMLEDDECARLALENRTANTAGCPG
Ga0335070_1000524013	3300032829	Soil	MRQRGHEVATASSSTDALAMMRAQIFDAMVMDCSQDTLDIPNFTAKAQGLQPSLAVFVAEEWGNALATGLEELAPVLRMLEDDECARLAVENGLMSASLFH
Ga0335070_114514921	3300032829	Soil	MRILYFNAELVDGKYVDIIRQRGHVVATASSGADALAMMRRQIFDALVIDRAQDTLDTRNFTAKAQGLQPSLAVFLGGEWGDELATGLEEFEHVLTMLEDDECARLAVESRMA
Ga0335069_100586484	3300032893	Soil	MMRREIFDALVIDCAHDTLDILNFTVKAQGPQPSLAVFLADEWGDELATGLETFAHVLTMLEDDECTRLAVEESIT
Ga0335069_105312943	3300032893	Soil	MRRQIFDALVIDCAHDTLDILNFTAKAQGLQPSLAVFLADEWGDDLATGLEEFAHVLTMLEDDECARLA
Ga0335069_111135631	3300032893	Soil	HFSPQPATGESVDVIRQQGYDVTTATSAAQALAIMRGQMFDAMVVDTSQDSLDILNFTAKAQGLQPSLAVFFADEWGDELAIGLKDFGSVLTMLQDDECTRLAVSG
Ga0335071_1000267417	3300032897	Soil	VATASSGADALAMMRRQLFDALVMDCAQDTLDILNFTAKAQGLQPSLAVFLADEWGDELVTGLEELGHVLRMLEDDECARLGLRAV
Ga0326728_10000012446	3300033402	Peat Soil	MARASSGADALAMMRTQIFDVLVMDCAQGTLDIQNFTAKAQGLQPSLAVFLADEWGDELATGLEELGNVLTMLEDDERVRLAVESRIA
Ga0326728_100040254	3300033402	Peat Soil	VATASSGADALAMMRRQLFDALVMDCAQDTLDILNFTAKAQGLQPSLAVFLADEWGDELVTGLEELGHVLTMLEDDECARLAVESRLA
Ga0326728_1002389710	3300033402	Peat Soil	MMRQQGHDVVTTSRHVDALAMMRGQSFDALVMDCAQDAVDILNFTAKAHGLQPSLSVFFADEWGDELATGLEELTHVLTMLEDDEFARLKVESLMA
Ga0326728_102555371	3300033402	Peat Soil	MMRQRGHDVVTTSRRADALAMMRGQSFDTLVMECAQDTVDILNFTAKAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEFARLKVESLMACRKAAIKPSQIDLWPLQVQASGWE
Ga0326728_109082672	3300033402	Peat Soil	MMRQQGHDVVTTSRRADALTIMRGQSFDAFVMDCAQDAVDILDFTAKAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEF
Ga0326727_100894545	3300033405	Peat Soil	MMRQRGHDVVTTSRGADALAMMREQSFDALVMDCAQDTLDIVSFTARAHGLQPSLAVFLADEWGDELATGLEELTHVLRMLEDDEFARLKVESLMA
Ga0326727_102612031	3300033405	Peat Soil	MMRQRGHDVVTTSRRADALAMMRGQSFDTLVMECAQDTVDILNFTAKAHGLQPSLAVFLADEWGDELATGLEELTHVLTMLEDDEFARLKVESLMA
Ga0371487_0035759_2736_3077	3300033982	Peat Soil	TKILYFNPESVHGKYVDIIRQRGHDVATASSGADALAMMRRQLFDALVMDCAQDTLDILNFTAKAQGLQPSLAVFLADEWGDELVTGLEELGHVLTMLEDDECARLAVESRLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061167

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences