Metagenome Family F061179

Basic Information
Family ID	F061179
Family Type	Metagenome
Number of Sequences	132
Average Sequence Length	81 residues
Representative Sequence	GAQEISVVAESSLNVPYKLVLVNPSGVALQTVDATNGTAVLNSTVSQSGTYLIKVVNVSLGPLQFTVTATPLVCR
Number of Associated Samples	105
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	1.52 %
% of genes from short scaffolds (< 2000 bps)	1.52 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.697 % of family members)
Environment Ontology (ENVO)	Unclassified (37.879 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.152 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 46.60% Coil/Unstructured: 53.40%
Feature Viewer

Powered by Feature Viewer

SCOP family	SCOP domain	Representative PDB	TM-score
b.18.1.0: Galactose-binding domain-like	d3jqwa_	3jqw	0.83
b.135.1.1: Superantigen (mitogen) Ypm	d1pm4a_	1pm4	0.8
b.14.1.0: Calpain large subunit, middle domain (domain III)	d1dkva5	1dkv	0.77
b.18.1.36: Galactose-binding domain-like	d1nqja_	1nqj	0.77
b.18.1.36: Galactose-binding domain-like	d5ikua1	5iku	0.77

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF08240	ADH_N	3.79
PF03734	YkuD	1.52
PF00903	Glyoxalase	0.76
PF13517	FG-GAP_3	0.76
PF00069	Pkinase	0.76
PF01839	FG-GAP	0.76
PF01061	ABC2_membrane	0.76
PF02638	GHL10	0.76
PF12079	DUF3558	0.76
PF13620	CarboxypepD_reg	0.76
PF13088	BNR_2	0.76
PF01551	Peptidase_M23	0.76
PF05635	23S_rRNA_IVP	0.76
PF02371	Transposase_20	0.76
PF01433	Peptidase_M1	0.76
PF00111	Fer2	0.76
PF12706	Lactamase_B_2	0.76
PF00801	PKD	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.03
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.52
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.52
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	0.76
COG1649	Uncharacterized lipoprotein YddW, UPF0748 family	Function unknown [S]	0.76
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.76

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300010360\|Ga0126372_12717290	Not Available	547	Open in IMG/M
3300012944\|Ga0137410_11712292	Not Available	553	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.48%
Host-Associated	Host-Associated	25.76%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.70%
Plants	Host-Associated → Plants	25.76%
Aquatic	Environmental → Aquatic	3.79%
Solid Waste	Engineered → Solid Waste	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.36%
Sediment	Environmental → Aquatic → Sediment	3.03%
Freshwater	Environmental → Aquatic → Freshwater	0.76%
Cave	Environmental → Terrestrial → Cave	0.76%
Grass	Engineered → Solid Waste → Grass	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.48%
Loam	Environmental → Terrestrial → Soil → Loam	20.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.27%
Ice	Environmental → Aquatic → Freshwater → Ice	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%
Composting	Engineered → Solid Waste → Grass → Composting	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	19.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	17.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.06%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.30%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.03%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.27%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.27%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.52%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.52%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.76%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300024284	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_01158430	2170459021	Switchgrass, Maize And Mischanthus Litter	MPPGASEISVVVESTLAVPFKLLLINPSGLTVQTVDASNGIAVINAPVTQSGTYVIKVVNVSLGPLQFTTTATPLVQR
JGI25406J46586_100850312	3300003203	Tabebuia Heterophylla Rhizosphere	QSGTASSGQTLSTNYDMPSGSQEISVVVESTVAVPFKLLMVNPSGLTVQTVDAANGIAIIDMPVTQSGTYVIKVVNLSVGPLQFTTTATPLVQR*
Ga0062589_1002582253	3300004156	Soil	ISSQPTAGPGATSNQSGTASAGQTATGGLMVPAGAQEISIVTESTLNVPYKLVLVNPTGLTLQTVDAVNGVAVLNASVTQSGTYFIKVVNVSLGPLQFTMTATPLVHR*
Ga0066398_100634031	3300004268	Tropical Forest Soil	NTTTQSNSVSAGQTSATGLMVPAGAQEISVVAESTVNVPYKLVLVNPSGVAIQTVDAANGVAVLNSTVSQNGTYVIKVVNVSLGPLQFSVTATPLVCR*
Ga0062595_1013411342	3300004479	Soil	SSLAVPFKLLMIDPSGLTVQTVDASNGIAVIDAPVTQGGTYVIKVVNLSVGPLQFTTTATPLVQR*
Ga0062594_1012883581	3300005093	Soil	VVAASSLNVPYKLVLVNPSGVALQTVDATNGVAVLNSTVNQSGTYLIKVVNVSLGPLQFTVTATPLVSR*
Ga0070676_109057321	3300005328	Miscanthus Rhizosphere	SGNVSSGQTSNTNYTMPPGSEEISLVVESTLAVPFKLLMVNPSGLTVQTVDASNGIAVIDMPVTQSGTYIIKVVNLSVGPLQFTTTATPLVQR*
Ga0068869_1019210631	3300005334	Miscanthus Rhizosphere	AISAGQTSSSGVTVPSSATEISVVAESTLNVPYKLVLVNPSGVTLQTVDAVNGVAVLNSSVSQSGTYLIKVVNVSLGPLQFTVTSTPTIRR*
Ga0068869_1019987822	3300005334	Miscanthus Rhizosphere	SGPGNTTNQSGNVSGGQTSNTNYNMPSGSQQISVVVESTLAVPFKLLMVNPSGLTVQTVDASNGIAVIDMPVTQSGTYIIKVVNLSVGPLQFTTTATPLVQR*
Ga0070687_1013268681	3300005343	Switchgrass Rhizosphere	NSAISSQPTTGPGATSSQSNSVSAGQTATGGLAVPAGAQEISVVTESTVNVPYKLVLLNPSGVTLQTVDAVNGVAVLNAPVTQSGTYLIKVVNVSLGPLQFTVTATPLVCR*
Ga0070705_1013126782	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	TGPGATSSQSNSVSAGQTATGGLAVPAGAQEISVVTESTVNVPYKVVLLNPSGVTLQTVDAVNGVAVLNAPVTQSGTYLIKVVNVSLGPLQFTVTATPLVCR*
Ga0070705_1017055451	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	GPGNTTNQSGNVSSGQTSNTNYTMPPGSEEISVVVESTLAVPFKLLMVNPSGLTVQTVDASNGIAVIDMPVTQSGTYIIKVVNLSVGPLQFTTTATPLVQR*
Ga0070694_1007457192	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	TTGPGATSSQSNSVSAGQTATGGLAVPAGAQEISVVTESTVNVPYKLVLLNPSGVTLQTVDAVNGVAVLNAPVTQSGTYLIKVVNVSLGPLQFTVTATPLVCR*
Ga0070708_1006683192	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	AMVAVAVYALPLAAGTASTGQTASTNYQMPSGSQEISVVAEASLNVPFKLALVNPSGLTLQTVDAVNGTAVLNATVSQSGVYVIKVINVSLGPLQFTTTATPLVTR*
Ga0070708_1007070171	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVAVAVYALPLAAGTASTGQTSSSNYQMPSGSPEISVVAEASLNVPFKLALVNPSGLTLQTVDAVNGTAVLNATVSQSGVYVIKVINVS
Ga0070708_1013876322	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GSQEISVVAESSLNVPFKLVLVNPSGLTLQTVDASNGTAVLDTSVTQSGIYVIKVINVSLGPLQFTTTVTPLVSR*
Ga0066686_109448771	3300005446	Soil	VSAGQSSLSGLTMPAGAQEISVVAESSVNVPFKLVLLNPSSVTLQTVDAANGTAVLNSAVSQTGTYVVKVVNVSLGPLQFTVTATPLVCR*
Ga0068867_1002730503	3300005459	Miscanthus Rhizosphere	EISVVTESTVNVPYKLILVNPSGVTLQTVDAVNGVAVLNAPVTQSGTYLIKVVNVSLGPLQFTMTATPFVCR*
Ga0070706_1004042102	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MVAVAVYALPLAAGTASTGQTASTNYQMPSGSQEISVVAEASLNVPFKLALVNPSGLTLQTVDAVNGTAVLNATVSQSGVYVIKVINVSLGPLQFTTTATPLVTR*
Ga0070706_1008275511	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ISVVAESSLDVPYKLVLINPSGVALQTVDASNGVAVLNSTVNQSGIYVIKVVNVSLGPLQFTVTATPLVCR*
Ga0070707_1013245022	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VPAGAQEISVVAESSLDVPYKLVLINPSGVALQTVDASNGVAVLNSTVNQSGIYVIKVVNVSLGPLQFTVTATPLVCR*
Ga0070707_1013639882	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VAVAVYALPLAAGTASTGQTASTNYQMPSGSQEISVVAEASLNVPFKLALVNPSGLTLQTVDAVNGTAVLNATVSQSGVYVIKVINVSLGPLQFTTTATPLVTR*
Ga0070679_1019885421	3300005530	Corn Rhizosphere	TNQSGSAAAGQTSNTNYQMPSGSREISVAAESTLAVPFKLVLVDPSGVSLQTADSVSGIATLSRPVTQGGVYVIKVVNLTLGPLQFKVTATPTVQR*
Ga0070697_1002964761	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTLVACGMKDNEPAQHRASAGQTSTNYSMPAGAQEISIVAESSLNVPVKLVLVNPSGVAMQTVDASNGTAVLYSTVSQNGRFVIKVVNVSLGPLQFTVTATPLVCR*
Ga0070686_1012723081	3300005544	Switchgrass Rhizosphere	SSASAGQTATGGLTVPAGAQEISVVTESTVNVPYKLILVNPSGVTLQTVDAVNGVAVLNAPVTQSGTYLIKVVNVSLGPLQFTMTATPFVCR*
Ga0070695_1001820271	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	GSQEISVVAESSLNVPFKLALVNPSGLTLQTVDASNGTAVLNASVTQTGVYVLKVINVSLGSLQFTTTTTPLVKR*
Ga0070696_1013538092	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	PGNTSNQSSSVSAGQSASKQYQLQSGSEQISIVAESNLNVPFKLLLVDPSGLTLQTVDSVGGMAVLDRPVTQSGLYVIKVVNLSLGPLQITTTTTPLVKR*
Ga0070704_1002617671	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ISVVTESTVNVPYKLILVNPSGVTLQTVDAVNGVAVLNAPVTQSGTYLIKVVNVSLGPLQFTMTATPFVCR*
Ga0070704_1015030381	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	GSKEISVVVESTLAVPFKLLLINPSGLTVQTVDAANGTAVIDAPVTQSGTYVIKVVNVSIGPLQFTTTATPLVQR*
Ga0066694_101607761	3300005574	Soil	GAQEISVVAESSLNVPYKLVLVNPSGVALQTVDATNGTAVLNSTVSQSGTYLIKVVNVSLGPLQFTVTATPLVCR*
Ga0068856_1018604051	3300005614	Corn Rhizosphere	YNMPSGSKEISVVVESTLAVPFKLLLINPSGLTVQTVDAANGTAVIDAPVTQGGTYVIKVVNVSIGPLQFTTTATPLVQR*
Ga0068866_106052342	3300005718	Miscanthus Rhizosphere	PYKLILVNPSGVTLQTVDAVNGVAVLNAPVTQSGTYLIKVVNVSLGPLQFTMTATPFVCR
Ga0068858_1008212571	3300005842	Switchgrass Rhizosphere	LAVPFKLLMVNPSGLTVQTVDASNGIAVIDMPVTQSGTYIIKVVNLSVGPLQFTTTATPLVQR*
Ga0081539_100281124	3300005985	Tabebuia Heterophylla Rhizosphere	AGTQEISVVTESTVAVPYKLVLVSPSGVALQTVDATNGVAVLNAPVTQGGTYLIKVVNVSLGPLQFTVTATPLVCR*
Ga0066656_103097681	3300006034	Soil	VSAGQTSSSGLTMPAGAQEISVVAEASLNVPYKLVLVNPSGVAVQTVDPSNGVAVLNSTVSQSGAYLIKVVNVSLGPLQFTVTATPLVKR*
Ga0066656_103200631	3300006034	Soil	EISVVAESSLNVPYKLVLVNPSGVALQTVDATNGTAVLNSTVSQSGTYLIKVVNVSLGPLQFTVTATPLVCR*
Ga0066656_103582473	3300006034	Soil	LSSNYQMQSGSQEISVVAESNVNVPFKLALVNPSGLTLQTVDATNGTAVLNASVTQTGIYVIKVVNVSLGPLLFTTTTTPLVKR*
Ga0070716_1014027211	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	SSTGFTVPAGAQEISVLAESSLNVPYKLVLVNPSGVAVQTVDASNGVAVLNSTVNQGGIYVIKVVNVSLGPLQFTVTATPLVCR*
Ga0079222_101282831	3300006755	Agricultural Soil	VPFKLVLVNPSGLTLQTVDAVNGVAVLNSSVSQSGTYLIKVVNVSLGPLQLTVTATPTIRR*
Ga0079220_106296031	3300006806	Agricultural Soil	VPAGAQEISIVTESTVNVPYKLILVNPSGVTLQTVDAVNGVAVLNAPVTQSGTYLIKVVNVSLGPLQFTVTATPFVCR*
Ga0075433_105186201	3300006852	Populus Rhizosphere	PFKIAIVNPSGVTLQTVDAVGGIATINQSVTQNGSYVIKVVNVSLGPIQFTTTVTPRVTR
Ga0075425_1030000322	3300006854	Populus Rhizosphere	GAQEISVVTESTVNVPYKLVLLNPSGVTLQTVDAVNGVAVLNAPVTQSGTYLIKVVNVSLGPLQFTVTATPLVCR*
Ga0075434_1023055591	3300006871	Populus Rhizosphere	EISVVAESSVNVPYKLVLVNPSGVALQTVDASNGVAVLNSTVSQSGTYIIKVVNVSLGPLQFTVTATPLVCR*
Ga0075424_1010411472	3300006904	Populus Rhizosphere	TSGPGGTTNQSNSVGAGQSGSNQYQMQSGSQEISIVAESNLNVPFKLLLVDPSGLTVQTVDAVGGMAVIDRPVTQGGLYVIKVVNLSLGPLQITTTTTPLVRR*
Ga0075435_1016867662	3300007076	Populus Rhizosphere	VNVPYKLVLLNPSGVTLQTVDAVNGVAVLNAPVTQSGTYLIKVVNVSLGPLQFTLTATPLVCR*
Ga0075435_1017205851	3300007076	Populus Rhizosphere	QEISVVVESTLAVPFKLLLISPSGLTVQTVDSSNGIAVVNAPVTQSGTYVIKVVNLNVGPLQFTTTATPLVQR*
Ga0099829_110643071	3300009038	Vadose Zone Soil	SDEQVQSGSQQISVVAESSLNVPFKLVLVDPTGVTLQTVDATNTMAVLNAPVTRSGVYVIKLINVSLGPLQFTLTTTPTVVR*
Ga0099830_110717121	3300009088	Vadose Zone Soil	AGAQEISVVAESSLNVPYKLVLINPSGVALQTVDASNGVAVLNSTVNQSGIYVIKVVNVSLGPLQFTVTATPLVCR*
Ga0099828_102419013	3300009089	Vadose Zone Soil	YSMPSGSQEISVVAESSLNVPFKLVLVNPSGLTLQTVDASNGTAVLDTSVTQSGIYVIKVINVSLGPLQFTTTVTPLVSR*
Ga0099827_103959301	3300009090	Vadose Zone Soil	KLVLVNPSGVALQTVDASNGVAVLNSTVNQSGTYLIKVVNVSLGPLQFTVTATPLVCR*
Ga0099827_109223792	3300009090	Vadose Zone Soil	VPFKVVLVDPSGLTLQTADSSGGMAVINQSVTQGGIYVIKVVNLSLGPLQFTTTTTPLVTR*
Ga0066709_1029390522	3300009137	Grasslands Soil	PFKLALVDPSGLTLQTVDAASNGMAVLNAPVTQSGVYVIKVINLSLGPLRFTVTATPLVSR*
Ga0099792_107557431	3300009143	Vadose Zone Soil	NVPYKLVLVNPSGVAVQTVDASNGVAVLNSTVNQSGLYLIKVVNVSLGPLQFTVTATPLVCR*
Ga0114129_119059881	3300009147	Populus Rhizosphere	AGQTANSSYQPPSGSSEMTVTVESTLNVPFKIAIVNPSGVTLQTVDAVGGIATINQSVTQNGSYVIKVVNVSLGPIQFTTTVTPRVTR*
Ga0105241_100987421	3300009174	Corn Rhizosphere	GGQTSNTNYNMPSGSQQISVVVESTLAVPYKLLLVNPSGLTVQIVDASNGIAVIDAPVTQAGVYVIKVVNLSVGPLQFTTTATPLVQR*
Ga0105242_131216001	3300009176	Miscanthus Rhizosphere	YKLVLVNPSGVTLQTVDAVNGVAVLNSSVSQSGTYLIKVVNVSLGPLQFTVTSTPTIRR*
Ga0126384_103746002	3300010046	Tropical Forest Soil	MPSGSQEISVVVESSLAVPFKLLMINPSGLTVQTVDASNGIAVIDAPVTQGGTYVIKVVNLSVGPLQFTTTATPLVQR*
Ga0126376_119962011	3300010359	Tropical Forest Soil	NAISAGQTSSLGVTVPSSATEISVVSESTLNIPYKLVLVNPSGVTLQTVDAVNGMAALNTNVSQSGAYLIKVVNVSLGPLQLTLTSTPLVKR*
Ga0126372_127172901	3300010360	Tropical Forest Soil	SGVVYVDGFCLQNSVSSAQPTTGPGATTNQSNSVSAGQTASSGFTVPVGAQEISVVAESTLNVPYKLVLVNPSGVAVQTIDASNGVAVLNSTVSQSGVYVIRVVNVSLGSLQFTVTATPLVCR*
Ga0126377_124104852	3300010362	Tropical Forest Soil	MPSGASEISVVVESTLAVPFKLLLINPSGVTVQTVDASNGIAVIDAPVTQGGTYVIKVVNLSVGPLQFTTTATPLVQR*
Ga0126377_134422101	3300010362	Tropical Forest Soil	QEISVVAESTVNVPYKLVLVNPSGVAIQTVDAANGVAVLNSTVSQNGTYVIKVVNVSLGPLQFSVTATPLVCR*
Ga0134128_118290402	3300010373	Terrestrial Soil	VPAGAQEISVLAESSLNVPYKLVLVNPSGLAVQTVDASNGVAVLNSTVSQGGTYIIKVVNVSLGPLQFTVTATPLVCR*
Ga0134124_125124441	3300010397	Terrestrial Soil	SGASEVSVVVESTLGVPFKLLLINPSGLTVQTVDASNGIAVVDAPVTQSGTYVIKVVNLSLGPLEIWSVATPLVSR*
Ga0134124_129151531	3300010397	Terrestrial Soil	GNTTNQSGSAAAGQTSNTNYQMPSGSREISVAAESTLAVPFKLVLVDPSGVSLQTADSVSGIATLSRPVTQGGVYVIKVVNLTLGPLQFKVTATPTVQR*
Ga0134122_108268781	3300010400	Terrestrial Soil	NVPFKIALLNPSGVTLQMVDSAAGIATISQPVTQGGTYVIKVVNVSLGPNQFTMTTTPVVQR*
Ga0134122_121273531	3300010400	Terrestrial Soil	ESTLAVPYKLLLVNPSGLTVQIVDASNGIAVIDAPVTQAGVYVIKVVNLSVGPLQFTTTATPLVQR*
Ga0137389_104096321	3300012096	Vadose Zone Soil	VIAESSLNVPYKLVLVNPSGVAVQTVDASNGVAVLNSTVSQSGTYLIKVINVSLGPLQFTVTATPLVCR*
Ga0137388_107152691	3300012189	Vadose Zone Soil	QPTTGPGSTTTQLSSVSAGQTSNSGFTVPAGAQEISVVAESSLNVPYKLVLINPSGVALQTVDASNGVAVLNSTVNQSGIYVIKVVNVSLGPLQFTVTATPLVCR*
Ga0137399_100306811	3300012203	Vadose Zone Soil	QTSSSGFTVPAGAQEISVVAESSLNVPYKLVLVNPSGVAVQTVDASNGVAVLNSTVNQSGIYLIKVVNVSLGPLQFTVTATPLVCR*
Ga0137362_103679972	3300012205	Vadose Zone Soil	AGAQEISVTAEASLNVPFKVVLVAPSGLTLQTADAVAGIATISSPVTQGGVYVIKVVNLSLGPLQFTATTTPTVQR*
Ga0137379_102138933	3300012209	Vadose Zone Soil	SQQVSVVAESSLNVPFKLALVNPSGVTLQTVDAANGIAVLNASVTQSGVYVIKVINVSLGPLQFTTTVTPLVTR*
Ga0137386_104096362	3300012351	Vadose Zone Soil	MQSGSQQISVVDESSVNVPFKLALVSPSGLTLQTVDASNGTAVLNASVTQSGIYVIKVINVSLGPLQFTTTITPLVGR*
Ga0137386_109144031	3300012351	Vadose Zone Soil	YQMQGGSQQVSVVAESSLNVPFKLALVNPSGVTLQTVDAANGIAVLNASVTQSGVYVIKVINVSLGPLQFTTTVTPLVTR*
Ga0137367_109944661	3300012353	Vadose Zone Soil	PGNTTNQSSNVLAGKTASSNYPMQSGSQEISVVAESSLNVPFKLVLVNPSGLALQTVDASNGIAVINTPVTQSGIYVIKVVNVSLGPLQFTVTATPLVTR*
Ga0137366_104327532	3300012354	Vadose Zone Soil	ISVVAESSLNVPFKLVLVNPSGLALQTVDASNGIAVINTPVTQSGIYVIKVVNVSLGPLQFTVTATPLVTR*
Ga0137369_104534231	3300012355	Vadose Zone Soil	GSQEISVTAESSLAVPFKLVLVDPSGLTLQTADSVSGIATISRPVTQGGVYVIKVVNLSLGPLQFTTTTTPTIKR*
Ga0137375_104110272	3300012360	Vadose Zone Soil	SSSNYQLPSGSQEISVVAESSLAVPFKLVLVDPSGLTLQTADSVSGIATISRPVTQDGVYVVRVVNLSLGQLQFTATTTPTIKR*
Ga0137360_101371433	3300012361	Vadose Zone Soil	TTNQSSNVSAGQTSGGNYQMQSGSQEISVVAESSLNVPFKLVLVNPSGLALQTVDASNGIAVINTSVTQGGTYVIKVVNVSLGPLQFNVTATPLVSR*
Ga0137390_103689082	3300012363	Vadose Zone Soil	ESSLNVPFKLVLVDPSGLTLQTVDASNGTAVLDTSVTQSGIYVIKVINVSLGPLQFTTTVTPLVSR*
Ga0136614_100476521	3300012684	Polar Desert Sand	SNYAMPSNSQEVSVVAESSVNVPFKLILLNPVGLTLQTAEASSGMAVLNVPVSQGGVYVIKVVNLSLGPLQFTTTTTPTVRR*
Ga0137396_102312011	3300012918	Vadose Zone Soil	QQGTASAGSTSSSNYQMSPGTSEISVVTESSLDVPFKLVLVDPTGLTLTTVDSSAGVAVLNAPVTQGGVYVIKVVNLSLGPLQFTTTTTPLVQR*
Ga0137410_117122921	3300012944	Vadose Zone Soil	VALAAAPAAGPGSTTNQAGSVSAGQTSSASYQPQTGSQEMSITVEATLNVPFKIALVSPSGLTLQTVDSVAGIGTLNQPVTQGGTYVIKVVNVSLGPLQFTTTVTPLVSR*
Ga0134076_102631511	3300012976	Grasslands Soil	NQSSTASAGQTSSSNYQMQSGSQEISVVAESNVNVPFKLALVNPSGLTLQTVDATNGTAVLNASVTQTGIYVIKVVNVSLGPLQFTTTTTPLVKR*
Ga0134076_105317981	3300012976	Grasslands Soil	NQASNVSAGQTSTSGFTMPAGAQEISVVAESSLNVPYKLVLVNPSGVALQTVDATNGTAVLNSTVSQSGTYLIKVVNVSLGPLQFTVTATPLVCR*
Ga0164305_103015432	3300012989	Soil	PPPGSQELAVSAESNLNVPFKLMLVDPAGLTLQSADSQGGIATVSKPVTPGGLYVIKVVNLSLGPFQFTTTITPTVRR*
Ga0157371_108581211	3300013102	Corn Rhizosphere	QTSSSGVTVPSSATEISVVAESTLNVPYKLVLVNPSGVTLQTVDAVNGVAVLNSSVSQSGTYLIKVVNVSLGPLQFTVTSTPTIRR*
Ga0157378_115453141	3300013297	Miscanthus Rhizosphere	ASTSSYQMQPGAQELSIAAESSADVPFKLLVLDPQGLTLQTATASAGSAVLNVPVTQTGVYVIKVVNLSLGPLQFTTTTTPTVRR*
Ga0157372_108052481	3300013307	Corn Rhizosphere	NYNMPSGSQQISVVVESTLAVPFKLLLINPSGLTVQTIDASNGIAVIDAPVTQGGTYVIQVVNLSVGPLQFTTTATPLVQR*
Ga0157372_124258741	3300013307	Corn Rhizosphere	NSVSAGQSASKQYQLQSGSEQISIVAESNLNVPFKLLLVDPSGLTLQTVDSVGGMAVLDRPVTQSGLYVIKVVNLSLGPLQITTTTTPLVKR*
Ga0137418_102794792	3300015241	Vadose Zone Soil	TTNQPGTASAGNTSSSNYQMPPGTREISVVTESSLDVPFKLVLVDPTGLTLTTVDSSAGVAVLNAPVTQGGVYVIKVVNLSLGPLQFTTTTTPLVQR*
Ga0137409_106175551	3300015245	Vadose Zone Soil	NVPFKLALVNPSGLTLQTVDASNGTAVLNASVTQTGVYVIKVINVSLGPLQFTTTTTPLVKR*
Ga0137403_100278531	3300015264	Vadose Zone Soil	AQPTSGPGTTTNQASTVSAGQTSTSGFTMPASAQEISVVAASSLNVPYKLVLVNPSGVAVQTVDASNGVAVLNSTVNQSGTYLIKVVNVSLGPLQFTVTATPLVCR*
Ga0137403_116303751	3300015264	Vadose Zone Soil	GQTASNNYQMQSGAQEISLSAESSLNVPFKVVLVAPSGLTLQTADSVAGIATISSPVTQGGVYVIRVVNLSLGPLQFTVTATPTVQR*
Ga0134089_102498432	3300015358	Grasslands Soil	NVSYKLVLVNPSGVALQTVDATNGTAVLNSTVSQSGTYLIKVVNVSLGPLQFTVTATPLVCR*
Ga0132258_124927771	3300015371	Arabidopsis Rhizosphere	ALAVPSGATEISVVAESTLNVPYKLVLVNPSGVTLQTVDASNGVAVLNSSVSQSGAYVVKVVNVSLGPLQFTVTATPLVTR*
Ga0132257_1000213071	3300015373	Arabidopsis Rhizosphere	TLNVPYKLVLVNPSGVTLQTVDAVNGVAVLNSSVSQSGTYLLKVVNVSLGPLQFTVTSTPTIRR*
Ga0132257_1007212573	3300015373	Arabidopsis Rhizosphere	NVPFKLVLVNPSGLTLQTVDAVNGVAVLNSSVSQSGTYLIKVVNVSLGPLQLTVTATPTIRR*
Ga0134083_104621472	3300017659	Grasslands Soil	SGLTMPAGAQEISVVAEASLNVPYKLVLVNPSGVAVQTVDPSNGVAVLNSTVNQSGAYLIKVVNVSLGPLQFTVTATPLVKR
Ga0184604_101697402	3300018000	Groundwater Sediment	EISVVAASSLNVPYKLVLVNPSGVALQTVDAANGVAVLNSTVNQSGPYLIKVVNVSLGPLQFTVTATPLVSR
Ga0184621_103613861	3300018054	Groundwater Sediment	PFKVVLVDPSGLSLQTADSVSGIATISRPVTQGGVYVIKVVNLTLGPLQFKVTATPTVQR
Ga0184619_101766991	3300018061	Groundwater Sediment	TGPGTTTNQSSSVSAGQTSTSGFTMPAGAQEISIVAASSLNVPYKLVLVNPSGVALQTVDASNGVAVLNSTVNQSGTYLIKVVNVSLGPLQFTVTATPLVYR
Ga0187892_104662611	3300019458	Bio-Ooze	LNVPFKLVLVNPSGLTLQTVDAVNGIAVLDAPVTQSGVYVIKVINVSLGPLQFTTTTTPSVNR
Ga0190267_111699401	3300019767	Soil	SLNLPFRLVLVDPSGLALASADASNGIATISRPVTQGGVYVIKVVNLSVGSLQITTTTTPLVKR
Ga0193747_10490942	3300019885	Soil	MPSGSQEISVVAEASLNVPFKLALVNPSGLTLQTVDATNGTAVLNASVTQTGVYVIKVINVSLGSLQFTDHRHASG
Ga0224452_10307952	3300022534	Groundwater Sediment	MPAGAQEISVVAESSLNVPYKLVLVNPSGVALQTIDAKNGVAVLNSPVSQGGTYLIKVVNVSLGPLQFTVTATPLVCR
Ga0247671_10804962	3300024284	Soil	KTSSTGFAMPTGSQEISVVAESTLNVPFKLTLVNPSGLTLQTVDASNGTAVLNASVTQTGTYVIKVINVSLGPLQFTTTVTPLVAR
Ga0207653_101794082	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	GNTTNQSGNASIGQTSSTNYNMPSGSQQISVVVESTLAVPFKLLLINPSGLTVQTIDASNGIAVIDAPVTQGGTYVIQVVNLSVGPLQFTTTATPLVQR
Ga0207688_105078222	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VPAGDQEISVVTESTVNVPYKLVLLNPSGVTLQTVDAVNGVAVLNAPVTQSGTYLIKVVNVSLGPLQFTVTATPLVCR
Ga0207684_104231781	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SLDVPYKLVLINPSGVALQTVDASNGVAVLNSTVNQSGIYVIKVVNVSLGPLQFTVTATPLVCR
Ga0207684_108576821	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	PSTGPGTTTNQPGNVSAGQTSSTGFTVPAGAQEISVLAESSLNVPYKLVLVNPSGVAVQTVDASNGVAVLNSTVNQGGIYVIKVVNVSLGPLQFTVTATPLVCR
Ga0207684_113187792	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	ESSLNIPFKLVLVGPSGLTLQTADASSGIAVINTPVTQGGIYVIKVVNLSLGPLQFTTTTTPLVTR
Ga0207646_100054034	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MVAVAVYALPLAAGTASTGQTASTNYQMPSGSQEISVVAEASLNVPFKLALVNPSGLTLQTVDAVNGTAVLNATVSQSGVYVIKVINVSLGPLQFTTTATPLVTR
Ga0207646_109087221	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AESSLDVPYKLVLINPSGVALQTVDASNGVAVLNSTVNQSGIYVIKVVNVSLGPLQFTVTATPLVCR
Ga0207665_100742592	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VLAESSLNVPYKLVLVNPSGVAVQTVDASNGVAVLNSTVNQGGIYVIKVVNVSLGPLQFTVTATPLVCR
Ga0207677_118857081	3300026023	Miscanthus Rhizosphere	LVLVNPSGVTLQTVDAVNGVAVLNSSVSQSGTYLIKVVNVSLGPLQFTVTSTPTIRR
Ga0207703_107262951	3300026035	Switchgrass Rhizosphere	GSEEISVVVESMLAVPFKLLMVNPSGLTVQTVDASNGIAVIDMPVTQSGTYIIKVVNLSVGPLQFTTTATPLVQR
Ga0207648_103224991	3300026089	Miscanthus Rhizosphere	EISVVTESTVNVPYKLILVNPSGVTLQTVDAVNGVAVLNAPVTQSGTYLIKVVNVSLGPLQFTMTATPFVCR
Ga0207648_115137772	3300026089	Miscanthus Rhizosphere	FKLLLVDPKGLTLQTVDATAGMAVLNMPVSQTGVYVIKVVNLSLGPLQFTTTTTPTVKR
Ga0209472_11561991	3300026323	Soil	NVSYKLVLVNPSGVALQTVDATNGTAVLNSTVSQSGTYLIKVVNVSLGPLQFTVTATPLVCR
Ga0209157_13747871	3300026537	Soil	VSAGQSSLSGLTMPAGAQEISVVAESSVNVPFKLVLLNPSSVTLQTVDAANGTAVLNSAVSQTGTYVVKVVNVSLGPLQFTVTATPLVCR
Ga0209056_105083022	3300026538	Soil	EISVVAESSVNVPFKLALVNPSGLTLQTIDAVNGTAVLNASVTQSGVYVIKVINVSLGPLQFTTTTTPLVSR
Ga0209073_101838211	3300027765	Agricultural Soil	VPAGAQEISIVTESTVNVPYKLILVNPSGVTLQTVDAVNGVAVLNAPVTQSGTYLIKVVNVSLGPLQFTVTATPFVCR
Ga0209701_101161173	3300027862	Vadose Zone Soil	AQEISVVAESSLNVPYKLVLINPSGVALQTVDASNGVAVLNSTVNQSGIYVIKVVNVSLGPLQFTVTATPLVCR
Ga0268264_116880351	3300028381	Switchgrass Rhizosphere	EEISVVAESSLAVPFKLLMVNPSGLTVQTVDASNGIAVIDMPVTQSGTYIIKVVNLSVGPLQFTTTATPLVQR
Ga0268264_118702631	3300028381	Switchgrass Rhizosphere	YKLVLVNPSGLTLQTVDAVNGVAVLNSSVSQSGTYLIKVVNVSLGPLQFTVTSTPTIRR
Ga0268264_123353551	3300028381	Switchgrass Rhizosphere	SVSAGQTSSSGFTMPAGAQEISVVAESSLNIPYKLVLVNPSGVALQTVNATNGVAVLNSSVSPGGTYLIKVVNVSLGPLSFTVTATPMVCR
Ga0310813_103120431	3300031716	Soil	TESTVAVPYKLVLVNPSGLALQTVDATNGVAVLNVPVTQSGTYLIKVVNVSLGPLQFTVTATPFVRR
Ga0310813_114323531	3300031716	Soil	ISSQPTTGPGATSSQSNSVSAGQTATGGLTVPAGAQEISVVTESTVNVPYKLVLVNPSGLTLQTVDATNGVAVLNAPVTQSGTYLIKVVNVSLGPLQFTVTATPLVCR
Ga0307405_120328831	3300031731	Rhizosphere	NQAGSAAAGQTSSSNYQPQSGSQEISVSAESNLNVPFKVVLVDPSGVLLQTADSVSGIATISQPVTQGGIYVIKVVNLSLGPLQFTVTTTPTVRR
Ga0307471_1011837031	3300032180	Hardwood Forest Soil	PTTGPGTTTNQSSSVSAGQTSTSGFTMPAGAQEISVVAESTVNVPYKLLLVNPSGVALQSVDATSGVAVLNSTVSQSGTYLIKVVNVSLGPLQFTVTATPLVCR
Ga0307471_1017196063	3300032180	Hardwood Forest Soil	KLVLVNPSGVTLQTVDAVNGVAVLNSSVSQSGTYLIKVVNVSLGPLQFTVTSTPTIRR
Ga0307472_1010079822	3300032205	Hardwood Forest Soil	AESSVNVPFKLALVNPSGLTLQTVDAVNGTAVLNSSVTQTGVYVIKVINVSLGPLQFTTTSTPLVTR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061179

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign