Metagenome / Metatranscriptome Family F061207

Basic Information
Family ID	F061207
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	48 residues
Representative Sequence	AGEADYILSADLKGVKTADGQPVRLVQEVTVHIYNDEREDTGLHLTH
Number of Associated Samples	117
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.152 % of family members)
Environment Ontology (ENVO)	Unclassified (23.485 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.545 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 18.67% Coil/Unstructured: 81.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF13620	CarboxypepD_reg	84.09
PF04011	LemA	3.03
PF00490	ALAD	2.27
PF00416	Ribosomal_S13	0.76
PF08818	DUF1801	0.76
PF01713	Smr	0.76
PF02518	HATPase_c	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	3.03
COG0113	Delta-aminolevulinic acid dehydratase, porphobilinogen synthase	Coenzyme transport and metabolism [H]	2.27
COG0099	Ribosomal protein S13	Translation, ribosomal structure and biogenesis [J]	0.76
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.76
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.76

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.94%
Host-Associated	Host-Associated	6.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.58%
Aquatic	Environmental → Aquatic	11.36%
Plants	Host-Associated → Plants	6.06%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.55%
Freshwater	Environmental → Aquatic → Freshwater	10.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.55%
Peat	Environmental → Terrestrial → Peat	3.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.52%
Sediment	Environmental → Aquatic → Sediment	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.27%
Loam	Environmental → Terrestrial → Soil → Loam	15.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.21%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.82%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.27%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.06%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.79%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.03%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.27%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.27%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.27%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000650	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A1	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022730	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100784483	3300000567	Peatlands Soil	RGEFAQRVPAGEADYIISADLKGVKFTDGTPAHLAQDVTVHVYNEEREDIGLHLTR*
AP72_2010_repI_A1DRAFT_10210531	3300000650	Forest Soil	RWQVISDHRGEFEVQLPPKENDYILSADLKGFKTTDGRQLRLVKEVMVHIYHDERQDVGLHLEF*
JGI12712J15308_100005171	3300001471	Forest Soil	ILTADLKGVKTADGQALHQVGEVKVHVDYDEREDTGLRLAP*
JGI12635J15846_101004744	3300001593	Forest Soil	ESDYILWADLKGFKPADGKPVHLVQQVTVHIYNDEREDTGLHLAH*
JGI25616J43925_101697573	3300002917	Grasslands Soil	QRVPAGECDYILSADLKGFKPADGKPVHLLREVTVHVFNDEREDTGLHLTQ*
Ga0063454_1016878741	3300004081	Soil	ESDYILTADLKNLKAADGKPLRLVQDVTIHVFNDEREDTSLHLTH*
Ga0066678_100671954	3300005181	Soil	AQRLPVGKTDYLVTADLKDFKPNDGKPLHLVQEVTVHIDSDERVDIGLHLTH*
Ga0066388_1007453681	3300005332	Tropical Forest Soil	SDHHGEFEQRLPAREAEYIVWADLKGFKPDDGQPVHLAKEVTVHIYHDERQDIGLHLEH*
Ga0070709_100405671	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	EFEQRLPAGEAEYIVWADLKGFRPDDGQPVHLAKEVTVHIYHDERQDIGLHLEH*
Ga0070713_1004799803	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VWTDLKGYKPEDGKPLHLAKEVTVHIYKDERQDIGLHLEH*
Ga0070711_1014243642	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	WADLKSFKSNNGKALRLVKEVTVHIFGDEREDTGLHLTY*
Ga0070734_101842181	3300005533	Surface Soil	DLKHVKTADGQPVHLVQDVTVHIYNDEREDTGLHLAR*
Ga0070733_112226382	3300005541	Surface Soil	TADLKHFKSADGRPLHLVQDVTVHVYKDEREDTGLHLTH*
Ga0070732_103390621	3300005542	Surface Soil	DHHGEFAQRVPAGESDYILWADLKGFKPADGKPLHLVQEVTVHVYADEREDTGLHLVH*
Ga0070732_109564282	3300005542	Surface Soil	GEAEYILTADLKGIKSVDGKPLHAQEVTVHIYNDEREDTGVHLTH*
Ga0070695_1012088822	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	SDHHGEFAQRLPPGDSDYILSADLKHVKTPDGQPLRLVQEVTIHITGEERVDTGLHLTY*
Ga0070762_102245541	3300005602	Soil	GEADYIVWADLKAFKPADGQPVHLVKEVTVHIYHDERQDIGLHLEH*
Ga0068856_1008254841	3300005614	Corn Rhizosphere	ADLKHVKTADGKPLHLAQEVRVHIYGEEREDTGLHLTY*
Ga0070766_108018981	3300005921	Soil	YSDHRGEFAQRVPPGEADYILTADLKGVKTADGKALHQVSEVKVHVDYDEREDTGLRLAP
Ga0066651_102311941	3300006031	Soil	DHHGEFAQRLPPGDSDYILSADLKHVKTPDGKPLRLVQEVTIHITGEERVDTGLHLTY*
Ga0075015_1009703461	3300006102	Watersheds	HGEFAQRVPAGESDYILWADLKGFKPADGKPLHLVQEVIVHVYGEEREDTGLHLVH*
Ga0070716_1002166521	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	WADLKGYKPADGKPLHLVKEVTVHIYNDERQDIGLHLQH*
Ga0066658_105411552	3300006794	Soil	LKHVKILDGKPLRLPQEVTLHIFGEERVDTGLHLTY*
Ga0099827_116020851	3300009090	Vadose Zone Soil	DLKDFKPNDGKPLHQVQEVTVHIDSDERVDIGLHLTH*
Ga0116222_13142381	3300009521	Peatlands Soil	EADYILSVDLKGIKTADGKPLRLVQEVTVHVYNDEREDTGLHLTF*
Ga0116220_103498221	3300009525	Peatlands Soil	ADLKHFKLADGKRLRLVQEVTVHIYNDERQDTGLHLAFDQP*
Ga0105237_121389861	3300009545	Corn Rhizosphere	DSDYILTVDLKHVKTPDGKPLRLVQEVTIHITGEERVDTGLHLTY*
Ga0116133_10299982	3300009623	Peatland	MGEFAQRVPTGEADYILSADLKGFKTVDGRPLLLVKEVTVHIYQDEREDTGLHLTIEEAGPNK*
Ga0116105_10036733	3300009624	Peatland	MGEFAQRVPTGEADYILSADLKSFKTVDGRPLRLVKEVTVHIYQDEREDTGLHLTIEEAGPNK*
Ga0126380_101007241	3300010043	Tropical Forest Soil	LSADLKHVKSADGRQVRLAKEVTVHIYNEEREDTGLHLTY*
Ga0126380_122720351	3300010043	Tropical Forest Soil	KENDYILSADLKGFKTADGKQLRLVKEVTVHIYHDERQDVGLHLEF*
Ga0126373_108058741	3300010048	Tropical Forest Soil	ATDKPKKIRWEVYSDHHGEFEQRLPAGEGEYIVGADLKGFKPADGQPVHLAKEVTVHIYNDERQDIGLHLEH*
Ga0099796_102647382	3300010159	Vadose Zone Soil	HNGEFAQRVPPGESDYILWADLKGYKPADGKPLRLVQEVTVHVYNDEREDTGLHLTH*
Ga0074044_101804634	3300010343	Bog Forest Soil	AGESDYILWADVKGVKLTDGSHLRAPEVTVHIYNDEREDTGLHLTRQDVAPSHP*
Ga0126370_108921942	3300010358	Tropical Forest Soil	DHHGEFAQRVPVGDCDYILTADLKGVKTKDGQPLLAKEVTVHIYDDEREDTGVNLSHLA*
Ga0126370_109683832	3300010358	Tropical Forest Soil	EFEIQLPPKENDYILSADLKGFKTADGKQLRLVKEVTVHIYHDERQDVGLHLEF*
Ga0126378_126067221	3300010361	Tropical Forest Soil	PAGKGDYIFSADLKDFKPSDGKPLHLVQEVTVHIEGDEHINISLHLTH*
Ga0126379_133142222	3300010366	Tropical Forest Soil	WQVFSDHHGEFEQQLPVGEADYILSADLKDFKTIDGRQLRLVKEVTVHIYHDERQDVGLHLEF*
Ga0150983_117472531	3300011120	Forest Soil	DYILSADLKGVKSVDGKPVHLLKEVTIHIYNDEREDTGLHLTQ*
Ga0137382_112106562	3300012200	Vadose Zone Soil	KGVKTNDGTPLRLVKEVTVHVYKDERVDTGLHLTR*
Ga0137365_107029521	3300012201	Vadose Zone Soil	EFAQRVPAGESDYIISADLKGLKTVDGKPLHLVKEVTVHIYKDEREDTGLHLSY*
Ga0137379_103136393	3300012209	Vadose Zone Soil	GEFAQRVPAGESDYIISADLKGFKAVDGKPLRLVQEVTVHIYKDEREDTGLHLTY*
Ga0137378_103420964	3300012210	Vadose Zone Soil	DYIISADLKGLKTVDGKPLHLVKEVTVHIYKDEREDTGLHLSY*
Ga0150984_1213559011	3300012469	Avena Fatua Rhizosphere	GDSDYILTADLKHVKTLDGKPLRLPQEVTLHIFGEERVDTGLHLTY*
Ga0126375_113030252	3300012948	Tropical Forest Soil	SDHRVEFEIQLPPKENDYILSADLKGFKTADGKQLRLVKEVTVHIYHDERQDVGLHLEF*
Ga0164309_102055001	3300012984	Soil	IVWADLKGFKPADGQPLHLVKEVTVHIYHDERQDIGLHLAH*
Ga0157378_124183122	3300013297	Miscanthus Rhizosphere	QRVPVGEADYILWADLKGVKTNDGTPLRLVKEVTVHVYKDERVDTGLHLTR*
Ga0163162_112270953	3300013306	Switchgrass Rhizosphere	ADLKGVKTLNGSPLQLVQQVTVHMQNDERQDIGLHLK*
Ga0181521_101913462	3300014158	Bog	EFAQRVPAGEADYIVSADLKGVKFTDGTPAHLAQDVTVHVYNEEREDIGLHLTR*
Ga0181523_101251711	3300014165	Bog	MGEFAQRVPAGEADYILSADLKGLKTADGQPLRLVQEVTVHIYNDEREDTGLHLTH*
Ga0181522_103391021	3300014657	Bog	HGEFAQRVPAGEADYILSADLKGVKYDDGTPARLVKEVTVHVYNEEREDTGLHLTR*
Ga0182034_116752951	3300016371	Soil	HGEFEQRLPAGDADYVLSADLKGFKTTDGKQLRLVKEVTVHVYNDERQDVGLHLTF
Ga0182039_107958163	3300016422	Soil	WADLKNFKPADGKPLHLVQEVTVHIYHDERQDVGLHLAH
Ga0187819_100915754	3300017943	Freshwater Sediment	WADLKGFKPADGKPLHLAQEVTVHVYDEEREDTGLHLTH
Ga0187819_103599903	3300017943	Freshwater Sediment	LTADLKHVKSADGQPLHLVQDVTVHVYDDEREDTGLHLTH
Ga0187819_106897481	3300017943	Freshwater Sediment	PAGEADYILSADLKGVKTADGQPVRLVQEVTVHIYNDEREDTGLHLTK
Ga0187817_101327804	3300017955	Freshwater Sediment	ILWADLKGFKPADGKPLHLAQEVTVHVYDEEREDTGLHLTH
Ga0187817_103439871	3300017955	Freshwater Sediment	ADYILWADLKGVKTSDGKPLHLAQEVTVHIYNEEREDTGLHLTH
Ga0187782_101043613	3300017975	Tropical Peatland	PAGEADYVVTADLKGVKFPDGTPVHLAQDVTVHVYNDEREAFSLHLTH
Ga0187782_102246283	3300017975	Tropical Peatland	YILWVDPRDLKDFKTPEGKSLRLVQEVTVHIYNDERADTGLHLTF
Ga0187782_109022872	3300017975	Tropical Peatland	AQRVPAGEADYILTADLKHVKTADGRAVRLAKEVTVHIYNDEREDTGLHLTY
Ga0187883_102338361	3300018037	Peatland	VPTGEADYILSADLKSFKTVDGRPLLLVKEVTVHIYQDEREDTGLHLTIEEAGPNK
Ga0187883_103502051	3300018037	Peatland	LTADLKHFKSPDGKPLRLVQDVTVHVYNDEREDTGLHLTNQ
Ga0187883_104158321	3300018037	Peatland	QRVPPGEADYILTADLKGVKTADGKPLHQVSEVKVHVDYDEREDTGLHLAP
Ga0187855_100558526	3300018038	Peatland	VPPGEADYILTADLKGVKTVDGKPLHQVGEVKVHVDYDEREDAGLHLAP
Ga0187766_101491233	3300018058	Tropical Peatland	DLKGVKTSDGQPLQAKEVTVHVYNDERVDTGLHLSK
Ga0187772_109666032	3300018085	Tropical Peatland	YILSADLKGVKTKDGKPVRLVQEVTVHIYNDEREDTGLHLIY
Ga0187769_109921242	3300018086	Tropical Peatland	DYILSADLKGVKSADGQPLHAEEVTVHVYNDEREDTGLHLIH
Ga0187771_110820942	3300018088	Tropical Peatland	DPKDLKDFKTRDGTPLRPVQEVTVHIYNDERADTGLHLTF
Ga0187800_12747921	3300019278	Peatland	YIISADLKGIKFADGTPARLAKEVTLHVYNDEREDTGLHLTR
Ga0187797_10863813	3300019284	Peatland	EFAQRVPAGEADYIISAEFKGIKFADGTPARLAKEVTLHVYNDEREDTGLHLTR
Ga0210395_107568452	3300020582	Soil	ADYILSADPKGVKTADGKPLHQVSEVKVHVDYDEREDTGLHLAP
Ga0210401_105992611	3300020583	Soil	DLKGVKTADGKALRLVQEVTVHIYHDEREDTGLHLTASN
Ga0210408_102458891	3300021178	Soil	VPAGESDYILSVDLKNVKTADGRPLRLVQEVTVHIYNDEREDTGLHLTY
Ga0210388_110306012	3300021181	Soil	DYILTADIKGVKTADGKPLHQVSEVKVHVDYDEREDTGLHLAP
Ga0210393_108885152	3300021401	Soil	TADLKGVKTADGKALHQVSEVKVHADYDEREDTGLRLAP
Ga0210393_113976331	3300021401	Soil	AQRVPAGEADYILTADLKGVKTADGQSVRLVQEVTVHIYNDEREDTGLHLTH
Ga0210397_112225361	3300021403	Soil	ILWADLKGYRPADGKPLHLVQEVTVHVYFDEREDTGLHLSH
Ga0210394_104239693	3300021420	Soil	QDVVEFAQRVPPGEADYVLTADLKGVKTAGGKPLHLVSEVKVHVDYDEREDTGLHLAE
Ga0210384_118385482	3300021432	Soil	DHLGEFAQRVPVGEADYILTADLKGVKTADGKALRLVQEVTVHIYHDEREDTGLHLTASN
Ga0182009_100284404	3300021445	Soil	YILTADLKHVKTADGKPLRLAQEVTVHVYGEEREDVGLHLTY
Ga0210390_116262532	3300021474	Soil	LPTGEADYILSADLRGFKTADGKPLHLVKEVTVHIYQDEREDTGLHLTVDEAGVPGAPAAGP
Ga0210392_110988252	3300021475	Soil	RVPPGEADYILTADLKGVKTADGQALHQVGEVKVHVDYDEREDTGLRLAP
Ga0210402_100244961	3300021478	Soil	GEADYILSADVKGVKTADGKPLHLVSEVKVHVDYDEREDTGLHLAQ
Ga0210410_103037324	3300021479	Soil	MGEFAQRVPAGESDYILWTDLKGFKSSDGKPVHLVQQVTVHIYNDEREDTGLHLAH
Ga0210410_114083563	3300021479	Soil	PAGEADYILWADLKGVKSADGKPLRLVEQVTVHIYNDEREDTGLHLTH
Ga0242642_10501081	3300022504	Soil	RVPPGEADYILWADLKGYKPADGKPLRLVQEVTVHVYNEEREDTGLHLTH
Ga0242661_10069854	3300022717	Soil	EFAQRVPAGESDYILSVDLKNVKSADGRPLRLVQEVTVHIYNDEREDTGLHLTY
Ga0242654_103062922	3300022726	Soil	SADLKNVKTADGRPLRLVQEVTVHIYNDEREDTGLHLTY
Ga0224570_1018401	3300022730	Rhizosphere	DYILTADLKGVKTADGKALHQVSEVKVHVDYDEREDTGLRLAP
Ga0224564_11356661	3300024271	Soil	EADYVLSADLKGFKTVDGRPLRLVKEVTVHIYQDEREDTGLHLTVDEAGVPGTAAAGP
Ga0207692_104611582	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LSADLKGLKPANGKPVHLVHEVTVHVYNDERQDVGLHLAY
Ga0207692_112041602	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	ADLKHVKTADGKPLRLVQEVTVHIYGEEREDTGLHLTY
Ga0207685_106019201	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	LPAKEAEYVVWADLKGYKPADGKPLHLVKEVTVHIYNDERQDIGLHLQH
Ga0207663_110083032	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PAGDAEYIIWADLKSFKSNNGKALRLVKEVTVHIFGDEREDTGLHLTY
Ga0207663_112349571	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	HGEFEQRLPAKETEYIVWADLKNYKPEDGKPLHLVKEVTVHIYNDERQDIGLHLEH
Ga0207665_103624123	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	RLPAKEAEYVVWADLKGYKPADGKPLHLVKEVTVHIYNDERQDIGLHLQH
Ga0209027_11440662	3300026300	Grasslands Soil	KHVKTLDGKPLRLPQEVTLHIFGEERVDTGLHLTY
Ga0209806_11527801	3300026529	Soil	LKDFKPNDGKPLHLVQEVTVHIDSDERVDIGLHLTH
Ga0208730_10422972	3300027047	Forest Soil	PAGDADYILSADLKNLNSKDGKPLHLVQEITVHVYNDERQDVGLHLAY
Ga0209580_100709784	3300027842	Surface Soil	EFAQRLPAGESDYILTADLKHVKTADGKPLHLAQEVRVHIYGEEREDTGLHLTY
Ga0209465_104720082	3300027874	Tropical Forest Soil	EQRLPAREAEYIVWADLKGFKPDDGQPVHLAKEVTVHIYHDERQDIGLHLEH
Ga0209380_104938273	3300027889	Soil	PAGESEYILTADLKHFKSPDGKPLHLLQEVTVHVYNDEREDTGLHLSH
Ga0222749_105488681	3300029636	Soil	HNGEFAQRVPVGESDYILWADLKGYRPADGKPLHLVQEVTVHVYFDEREDTGLHLSH
Ga0302177_103544802	3300030053	Palsa	VYSDHHGEFAQRVPAGEADYILSADLKGVKSPDGQPIHAADVTVHIYNEEREDTGVHITH
Ga0302182_101804271	3300030054	Palsa	GEFAQRVPPGEADYILTADLKGVKTADGKPLHQASEVKVHVDYDEREDTGLRLAP
Ga0310037_100419241	3300030494	Peatlands Soil	GEFAQRVPAGERDYILSADLKHVKSADGRTLHLVKEVTVHIYNDEREDTGLHLSF
Ga0311356_101546641	3300030617	Palsa	ADLKGVKTADGKPLHQASEVKVHVDYDEREDTGLRLAP
Ga0310038_101326513	3300030707	Peatlands Soil	LKGIKTADGKPLRLVQEVTVHVYNDEREDTGLHLTF
Ga0170834_1113742211	3300031057	Forest Soil	KGLKTADGQPLRLVQEVTVHIYNDEREDTGLHLTH
Ga0265760_103020242	3300031090	Soil	VYSDHRGEFAQRVPPGEADYILTADLKGVKTADGQALHQVGEVKVHVDYDEREDTGLRLA
Ga0170822_149934601	3300031122	Forest Soil	DYILSADLKGLKTTDGRSLRLVKEVTVHIYNDEREDTGLHLTY
Ga0170823_160291432	3300031128	Forest Soil	QRVPAGEADYILTADLKHAKFADGKPLRLPKDVTVHIYNDEREDTGLHLTY
Ga0302307_103157323	3300031233	Palsa	DHRGEFAQRVPPGEADYILTADLKGVKTADGKPLHQVGEVKVHVDYDEREDTGVRLAP
Ga0265332_102396942	3300031238	Rhizosphere	AGEADYILSADLKGVKTADGQPVRLVQEVTVHIYNDEREDTGLHLTH
Ga0265325_101915133	3300031241	Rhizosphere	PAGEADYILSADLKGVKTADGQLVRLVQEVTVHIYHDEREDTGLHLTK
Ga0170819_145061782	3300031469	Forest Soil	ESDYILWADLKGYKPADGKPLRLVQEVTVHVYNDEREDTGLHLTH
Ga0307477_101290044	3300031753	Hardwood Forest Soil	LWADLKGVKSADGKPLRLAQPVTVHIYNDEREDTGLHLTH
Ga0307478_106582313	3300031823	Hardwood Forest Soil	MGEFAQRVPAGEADYILWADLKGVKSADGKPLRLVEQVTVHIYNDEREDTGLHLTH
Ga0306923_119187072	3300031910	Soil	PGKVRWQVVSDHHGEFEQRLPAGDADYVLSADLKGFKTTDGKQLRLVKEVTVHVYNDERQDVGLHLTF
Ga0306921_100557801	3300031912	Soil	WQVVSDHHGEFEQRLPAGDADYVLSADLKGFKTTDGKQLRLVKEVTVHVYNDERQDVGLHLTF
Ga0306921_117948431	3300031912	Soil	DLKGYKPGDGKPLHLVKEVTVHIYNDERQDIGLHLEH
Ga0308175_1002528773	3300031938	Soil	HGEFAQRLPAGESDYILSADLKHVKTADGRSLHLAHEVSVHVYGEEREDVGLHLIY
Ga0310912_102519671	3300031941	Soil	FEQRLPAGDADYVLSADLKGFKTTDGKQLRLVKEVTVHVYNDERQDVGLHLTF
Ga0307479_102888574	3300031962	Hardwood Forest Soil	DHHGEFAQRVPAGESDYILWADLKNFKPSDGKPLHLVQEVTVHVYGDEREDTGLHLTH
Ga0318558_107084472	3300032044	Soil	LKGFKTTDGKQLRLVKEVTVHVYNDERQDVGLHLTF
Ga0307471_1000087286	3300032180	Hardwood Forest Soil	DYILWADLKGFKPADGKPLRLVQEVTVHVYNDERQDVGLHLKH
Ga0335080_102078154	3300032828	Soil	FAQRVPAGEADYILFIDPKGLKTSDGKRLLLPHEVTVHIYNEEREDTGLHLTY
Ga0335070_111019772	3300032829	Soil	KVDYIVYADLKGVKSLDGKPLHLVSEVTVQINNDERQDIGLHLTN
Ga0335081_100946655	3300032892	Soil	DLKGFKTTDGRQLRLVKEVTVHIYHDERQDVGLHLEF
Ga0335077_109123621	3300033158	Soil	DYILSIDSKGIKSADGKSLRLAQEVTVHIYNEEREDTGLHLTY
Ga0314867_127039_2_163	3300033808	Peatland	FAQRVPVGECDYILSADLKGVKSSDGQPLRLLKEVTVHIYNDEREDTGLHLSH

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061207

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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