Basic Information | |
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Family ID | F061313 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 132 |
Average Sequence Length | 51 residues |
Representative Sequence | MNDQNRVLARRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS |
Number of Associated Samples | 88 |
Number of Associated Scaffolds | 130 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 81.82 % |
% of genes near scaffold ends (potentially truncated) | 26.52 % |
% of genes from short scaffolds (< 2000 bps) | 86.36 % |
Associated GOLD sequencing projects | 75 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.27 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (84.091 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (17.424 % of family members) |
Environment Ontology (ENVO) | Unclassified (28.030 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (54.545 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 14.10% β-sheet: 0.00% Coil/Unstructured: 85.90% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.27 |
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Pfam ID | Name | % Frequency in 130 Family Scaffolds |
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PF00664 | ABC_membrane | 2.31 |
PF00005 | ABC_tran | 1.54 |
PF03976 | PPK2 | 0.77 |
PF00072 | Response_reg | 0.77 |
COG ID | Name | Functional Category | % Frequency in 130 Family Scaffolds |
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COG2326 | Polyphosphate kinase 2, PPK2 family | Energy production and conversion [C] | 0.77 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 84.09 % |
All Organisms | root | All Organisms | 15.91 % |
Visualization |
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Habitat | Taxonomy | Distribution |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 17.42% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 13.64% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 6.82% |
Host-Associated | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated | 6.06% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.30% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 5.30% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 4.55% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 4.55% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 3.79% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 3.79% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 3.03% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.03% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 2.27% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.27% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 1.52% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.52% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.52% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 1.52% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 1.52% |
Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 1.52% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.52% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.52% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 0.76% |
Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 0.76% |
Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 0.76% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.76% |
Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil | 0.76% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.76% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.76% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 0.76% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2170459002 | Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm | Environmental | Open in IMG/M |
3300003324 | Sugarcane bulk soil Sample H2 | Environmental | Open in IMG/M |
3300003579 | Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only) | Host-Associated | Open in IMG/M |
3300004153 | Grasslands soil microbial communities from Hopland, California, USA (version 2) | Environmental | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300004799 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
3300004800 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
3300004801 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Environmental | Open in IMG/M |
3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Environmental | Open in IMG/M |
3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
3300005526 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 | Environmental | Open in IMG/M |
3300005529 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1 | Environmental | Open in IMG/M |
3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Host-Associated | Open in IMG/M |
3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
3300005575 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 | Environmental | Open in IMG/M |
3300005587 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 | Environmental | Open in IMG/M |
3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Environmental | Open in IMG/M |
3300006041 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 | Environmental | Open in IMG/M |
3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Environmental | Open in IMG/M |
3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
3300006755 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter | Environmental | Open in IMG/M |
3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
3300007788 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 | Environmental | Open in IMG/M |
3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300010396 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2 | Environmental | Open in IMG/M |
3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
3300011332 | Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
3300017930 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5 | Environmental | Open in IMG/M |
3300018433 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116 | Environmental | Open in IMG/M |
3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020076 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) | Environmental | Open in IMG/M |
3300020077 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020080 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300021151 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026334 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes) | Environmental | Open in IMG/M |
3300026527 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes) | Environmental | Open in IMG/M |
3300027821 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
3300027910 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes) | Environmental | Open in IMG/M |
3300030841 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 EcM (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030853 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 Emin (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030854 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 SO (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030916 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030917 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 Emin (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300031057 | Oak Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031446 | Fir Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031474 | Fir Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
3300033475 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC | Environmental | Open in IMG/M |
3300033486 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
E1_08296100 | 2170459002 | Grass Soil | MNDHNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS |
soilH2_102677413 | 3300003324 | Sugarcane Root And Bulk Soil | MNDQNRVLARRGARDLTGEEVEQVCGGFRTATKCSVTAAGAIDGDLHECS* |
Ga0007429J51699_10931703 | 3300003579 | Avena Fatua Rhizosphere | MMKGENMNDHNRVLARRGARDLTEQEVEQVCGGLRTATKCSVTAAGAIDGDLHECS* |
Ga0063455_1000006554 | 3300004153 | Soil | MNDHNRVLARRGARDLTEQEVEQVCGGLRTATKCSVTAAGAIDGDLHECS* |
Ga0062595_1000120873 | 3300004479 | Soil | MNDQNRVLARRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS* |
Ga0062595_1004807863 | 3300004479 | Soil | MDERRNTMNDQNRVLARRGARDLTEQEIEKVCGGLRTATKCSLTAAGAIDGDLHECS* |
Ga0062595_1013043052 | 3300004479 | Soil | MNDQNRVLVRRGARDLTGEEVEQVCGGLKTATKCSVTAAGKIDGDLHECS* |
Ga0058863_100125093 | 3300004799 | Host-Associated | MNDQNRVLARRGARDLNEKEINQVCGGLRTATKCSLTAAGALDGDLHECS* |
Ga0058863_100760312 | 3300004799 | Host-Associated | MNDQNRVLARRGARDLTEQEIEKVCGGLRTATKCSLTAAGAIDGDLHECS* |
Ga0058863_1009259811 | 3300004799 | Host-Associated | MNDKNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS* |
Ga0058863_119657382 | 3300004799 | Host-Associated | MNDHNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS* |
Ga0058861_101126832 | 3300004800 | Host-Associated | MMKGENTMNDQNRVLARRGARDLTEQEIEKVCGGLRTATKCSLTAAGAIDGDLHECS* |
Ga0058861_101699103 | 3300004800 | Host-Associated | MKDQNRVLVRRGARDLSGEEVEQVCGGLRTATKCTLTLAGASDGDTHSECGADIA* |
Ga0058861_120272992 | 3300004800 | Host-Associated | MNDQNRVLIRRGARDLTEQEVEQVCGGLRTATKCSVTAAGAIDGDLHECS* |
Ga0058860_115175194 | 3300004801 | Host-Associated | MNDQNRVLIRRGARDLNEQEVEQVCGGLRTATKCSVTAAGAIDGDLHECS* |
Ga0070692_113620742 | 3300005345 | Corn, Switchgrass And Miscanthus Rhizosphere | RVLARRGARDLNEKEINQVCGGLRTATKCSLTAAGALDGDLHECS* |
Ga0070709_101056704 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLARRGARDLDEHEMDQVCGGLRTATKCSVTPAGAIDGDLFHSECGSPDQ* |
Ga0070709_101056707 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MNNHNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGKIDGDLHECS* |
Ga0070709_105237163 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS* |
Ga0070709_114493152 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | ERRTSMNDQNRVLARKGARDLTEKEVEQVCGGLRTATKCSVTAAGSIDGDLHECS* |
Ga0070709_117392941 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | FNGPDDERRNTMNDQNRVLARKGARDLTGEEVEQVCGGLKTATKCSVTAAGKIDGDLHECS* |
Ga0070714_1003405404 | 3300005435 | Agricultural Soil | MSDQNRVLARRGARDLTGEEVEQVCGGLRTATKCSVTAAGKIDGDLHECS* |
Ga0070714_1015799221 | 3300005435 | Agricultural Soil | MNDQNRVLARRGARDLTGEEVEQVCGGLRTATKCSVTAAGAIDGDLHECS* |
Ga0070713_1012151153 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLIRRGARDMTEQEVEQVCGGLRTATKCSVTAAGAIDGDLHECS* |
Ga0070710_103189151 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLARRGARDLTGEEVEQVCGGLRTATKCSVTAAGKIDGDLHECS* |
Ga0070711_1019011641 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MKGENTMNDQNRVLVRRGARDLTGEEVEQVCGGLRTATKCSVTPAGAIDGDLHECS* |
Ga0073909_100756065 | 3300005526 | Surface Soil | MTKGEKSMNDQNRVLVRRGARVLNEEEVEEVCGGLRTATKCTLTIAGAIDGDLHSECGGDV* |
Ga0073909_100824854 | 3300005526 | Surface Soil | MNEQSRVLIRQGARELNEQEVKQVCGGLRTATKCTVTAAGAIDGDLHECS* |
Ga0070741_1002362410 | 3300005529 | Surface Soil | MRDNDRVLARRGARDLDEKEVEQVAAGLRTTTKCSLVATTRDGDVFLGEC* |
Ga0068853_1000616196 | 3300005539 | Corn Rhizosphere | MNDHNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTASGAIDGDLHECS* |
Ga0068855_1016426283 | 3300005563 | Corn Rhizosphere | MNDQNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHE |
Ga0066702_100539584 | 3300005575 | Soil | MNDHNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGTIDGDLHECS* |
Ga0066654_104068871 | 3300005587 | Soil | GARDLTEQEVEQVCGGLRTATKCTVTAAGAIDGDLHECS* |
Ga0068856_1013670313 | 3300005614 | Corn Rhizosphere | MNDQNRVLVRRGARVLNEEEVEEVCGGLRTATKCTLTIAGAIDGDLHSECGGDVVA* |
Ga0068852_1009048123 | 3300005616 | Corn Rhizosphere | MNDQNRVLARRGARDLTEQEIEKVCGGLRTATKCSLTAAGAID |
Ga0066903_1011419273 | 3300005764 | Tropical Forest Soil | MNDQDRVLIRRGARDLSGEEVEQVCGGLRTATKCTVTVGGASDGDTHSECGADIA* |
Ga0066903_1026227902 | 3300005764 | Tropical Forest Soil | MNHDSRVLVRKGARVLNDEEVAEVCGGLRTATKCSLTPAGAIDGDAHSECGGDI* |
Ga0070717_102367694 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLARRGARDMTEQEVEKVCGGLRTATKCSVTAAGAIDGDLHECS* |
Ga0070717_102831995 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | PMMKGENTMNDQNRVLARRGARDLTEQEIEKVCGGLRTATKCSLTAAGAIDGDLHECS* |
Ga0070717_103112431 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLMRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS* |
Ga0070717_110159692 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLLRQGARDLTLEEVQVVNGGLHTATKCSIIAPHSFDGDPGECGQW* |
Ga0070717_112062031 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLIRRGARDLTGEEVEQVCGGLKTATKCSVTAAGKIDGDLHECS* |
Ga0070717_119148932 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLARRGARDLTENEIEQVCGGLRTATKCSLTAAGTIDGDLHDCS* |
Ga0075023_1000085292 | 3300006041 | Watersheds | MNDQNRVLLRRGARDLSGEEVEQVCGGLRTATKCTVTVGGASDGDTHSECGADIA* |
Ga0070715_103672002 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLARRGARDLNEKEIDQVCGGLRTATKCSLTAAGSLDGDLHECS* |
Ga0070716_1001030942 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLARKGARDLTGEEVEQVCGGLKTATKCSVTAAGKIDGDLHECS* |
Ga0070712_1002318567 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDHNRVLARRGARDLDEHEIVQVAGGLRTATKCSVTPAGAL |
Ga0070712_1018058811 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLLRQGARDLTLEEVQVVNGGLHTATKCSITATGSFDGDPGECGQW* |
Ga0079222_106123901 | 3300006755 | Agricultural Soil | MNNHNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS* |
Ga0079221_108262122 | 3300006804 | Agricultural Soil | MNDQNRVLARRGARYLTGEEVEQVCGGLRTATKCSVTAAGAIDGDLHECS* |
Ga0079220_108657703 | 3300006806 | Agricultural Soil | MNDQNRVLVRRGARVLNEEEVEEVCGGLRTATKCTLTIAGAIDGDLHSECGGDV* |
Ga0079219_110820241 | 3300006954 | Agricultural Soil | IKGENTMNDQNRVLARKGARDLTGEEVEQVCGGLRTATKCSVTAAGKIDGDLHECS* |
Ga0099795_102346992 | 3300007788 | Vadose Zone Soil | MNDHNRVLVRRGARDLTEQEVEQVCGGLRTATKCTVTAAGAIDGDLHECS* |
Ga0105245_1000199817 | 3300009098 | Miscanthus Rhizosphere | MKDHNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS* |
Ga0126370_116858282 | 3300010358 | Tropical Forest Soil | MNDQNRVLVRRGARDLNGEEVEQVCGGLKTATKCSVTAAGKIDGDLHECS* |
Ga0126377_125954672 | 3300010362 | Tropical Forest Soil | MDQNNRVLGRWGARELSGEEVEQVCGGLRTATKCTVTLGGASDGDTHSECGADIA* |
Ga0105239_107719621 | 3300010375 | Corn Rhizosphere | MDPMMEGESNMNDQDRVLARRGARDLTGEEVEKVCGGLRTATKCSLTAAGAIDGDLHECS |
Ga0134126_107242933 | 3300010396 | Terrestrial Soil | LVRRGARDLNEQEVEKVCGGLRTATKCSVTAAGAIDGDLHEC* |
Ga0134126_117428751 | 3300010396 | Terrestrial Soil | RVLVRRGARDLNEQEVEKVCGGLRTATKCSVTAAGAIDGDLHEC* |
Ga0126383_100650797 | 3300010398 | Tropical Forest Soil | MNDQNRVLARRGARDLTGEEIEKVCGGLRTATKCSLTAAGKIDGDLHECS* |
Ga0126317_110501996 | 3300011332 | Soil | MMKGEKIMNDQNRVLARRGARDLNEKEIDQVCGGLRTATKCSLTAAGSLDGDLHECS* |
Ga0150985_1054933991 | 3300012212 | Avena Fatua Rhizosphere | MQDQNRVLARKGARDVTEQEVEQVCGGIRTATKCTLTAAGALDGDLHECS* |
Ga0150985_1063695862 | 3300012212 | Avena Fatua Rhizosphere | MNDHNRVLVRRGARDLTGKEVEQVCGGLRTATKCSVTVAGAIDGDLHECS* |
Ga0150985_1071511399 | 3300012212 | Avena Fatua Rhizosphere | MMKGENIMNDQNRVLARRGARDLTEQEIEKVCGGLRTATKCSLTAAG |
Ga0150985_1139631912 | 3300012212 | Avena Fatua Rhizosphere | MNDQSRVLIRQGARELNEKEVEQVCGGLRTVTKCSLTAAGALDGDVHLGEC* |
Ga0150984_1089038111 | 3300012469 | Avena Fatua Rhizosphere | MMKGENIMNDQNRVLARRGARDLTEQEIEKVCGGLRTATKCSLTAAGAIDGDLHECS* |
Ga0164300_102797062 | 3300012951 | Soil | MNDQNRVLARKGARDLTGEEVEQVCGGLRTATKCSVTAAGKIDGDLHECS* |
Ga0164300_105016451 | 3300012951 | Soil | MNDQNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAI |
Ga0126369_129611632 | 3300012971 | Tropical Forest Soil | ARSADPMNERRKNMNNQSRVLIRQGARELNEKEVEQVCGGLRTATKCSVTAAGVIDGDLHECS* |
Ga0164309_113296263 | 3300012984 | Soil | MNDQNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGKIDGDLHECS* |
Ga0164308_104364042 | 3300012985 | Soil | MNDQNRVLIRRGARDITEEEVEQVCGGLRTATKCSVTAAGKIDGDLHECS* |
Ga0164308_118491012 | 3300012985 | Soil | MKGEITMNDKNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS* |
Ga0164307_114680811 | 3300012987 | Soil | MNDQNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGK |
Ga0187825_100743793 | 3300017930 | Freshwater Sediment | MDDKNRVLVRRGARDMTEQEVEKVCGGLRTATKCSVTAAGAIDGDLHECS |
Ga0066667_113844762 | 3300018433 | Grasslands Soil | MSDQNRVLARRGARDLTGEEVEQVCGGLRTATKCSVTAAGAIDGDLHECS |
Ga0197907_102047491 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLLRRGARDLDKQEIALVAGGLRTATKCSVTPAGAIDGDTFHSECGSPDL |
Ga0197907_107278797 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLIRRGARDLTEQEVEQVCGGLRTATKCSVTAAGAIDGDLHECS |
Ga0197907_108493764 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLARRGARDLTEQEIEKVCGGLRTATKCSLTAAG |
Ga0197907_111969771 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | RDLTEQEIEKVCGGLRTATKCSLTAAGAIDGDLHECS |
Ga0206356_101697912 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLARRGARDLTEQEIEKVCGGLRTATKCSLTAAGAIDGDLHECS |
Ga0206349_14690141 | 3300020075 | Corn, Switchgrass And Miscanthus Rhizosphere | VLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS |
Ga0206355_13627392 | 3300020076 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDHNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTASGAIDGDLHECS |
Ga0206355_15914302 | 3300020076 | Corn, Switchgrass And Miscanthus Rhizosphere | LIGPNDERRNTMNDQNRVLARRGARDLNEKEINQVCGGLRTATKCSLTAAGALDGDLHEC |
Ga0206355_17236733 | 3300020076 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLARRGARDLSEKEVEQVCGGLRTATKCSVTAAGAIDGDLHEC |
Ga0206351_105821993 | 3300020077 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQDRVLARRGARDLTGEEVEKVCGGLRTATKCSLTAAGAIDGDLHECS |
Ga0206352_102259831 | 3300020078 | Corn, Switchgrass And Miscanthus Rhizosphere | MKGENTMNDQNRVLARRGARDLTEQEIEKVCGGLRTATKCSLTAAGAIDGDLHECS |
Ga0206352_103427386 | 3300020078 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLARRGARDLTEQEIEKVCGGLRTATKCSLTAAGAIDGDLH |
Ga0206352_104500162 | 3300020078 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS |
Ga0206350_109196303 | 3300020080 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLARRGARDLTEQEIEKVCGGLRTATKCSLTAAGAIDGD |
Ga0206350_109700103 | 3300020080 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLARRGARDLNEKEINQVCGGLRTATKCSLTAAGALDGDLHECS |
Ga0206350_112463663 | 3300020080 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLARRGARDLTEQEIEKVCGGLRTATKCSLTAAGAIDG |
Ga0206354_110968772 | 3300020081 | Corn, Switchgrass And Miscanthus Rhizosphere | MDERRNTMNDQNRVLARRGARDLTEQEIEKVCGGLRTATKCSLTAAGAIDGDLHECS |
Ga0206353_114729632 | 3300020082 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLARRGARDLTEQEIEKVCGGLRTATKCSLTAAGALDGDLHECS |
Ga0179584_12184492 | 3300021151 | Vadose Zone Soil | MNDQNRVLVRRGARDLTGEEVEQVCGGLRTATKCSVTAAGAIDGDLHECS |
Ga0126371_101996052 | 3300021560 | Tropical Forest Soil | MNDPNRVLLRRGARDMTENEVQQVCGGLRTVTKCSVTPAGAIDGDTFHSECGSPDQ |
Ga0126371_104078521 | 3300021560 | Tropical Forest Soil | RRKSMNDQNRVLVRRGARDLNEQEVEKVCGGLRTATKCSLTAAGTIDGDLHEC |
Ga0126371_104088113 | 3300021560 | Tropical Forest Soil | MKDINRVLARRGARDLDEKEVEQVAGGLRTTTKCSLVASTRDGDVLLGEC |
Ga0126371_125134342 | 3300021560 | Tropical Forest Soil | MSDTNRVLARRGARDLDEKEVEQVAGGLRTTTKCSLVASTRDGDTFLGEC |
Ga0126371_136263552 | 3300021560 | Tropical Forest Soil | MRDNDRVLARRGARDLDEQEVEQVLGGLRTTTKCSLVATTRDGDTFLGEC |
Ga0207692_106921411 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | RSTDPNDEGRNTMNDQNRVLARKGARDLTGEEVEEVCGGLRTATKCSVTAAGKIDGDLHECS |
Ga0207685_103429682 | 3300025905 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLARRGARDLNEKEIDQVCGGLRTATKCSLTAAGSLDGDLHECS |
Ga0207695_116457841 | 3300025913 | Corn Rhizosphere | MKGEITMNDKNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS |
Ga0207693_102092405 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | MNDQNRVLARRGARDLTGEEVEKVCGGLKTATKCSVTAAGKIDGDLHECS |
Ga0207663_109458412 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | TKRRMSMNDHNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS |
Ga0207660_107198691 | 3300025917 | Corn Rhizosphere | NHERRITMNDKNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS |
Ga0207652_103903233 | 3300025921 | Corn Rhizosphere | MNDKNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS |
Ga0207687_1000307311 | 3300025927 | Miscanthus Rhizosphere | MKDHNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS |
Ga0207702_113613322 | 3300026078 | Corn Rhizosphere | MNDQNRVLVRRGARVLNEEEVEEVCGGLRTATKCTLTIAGAIDGDLHSECGGDVVA |
Ga0207698_113927583 | 3300026142 | Corn Rhizosphere | DLTEQEIEKVCGGLRTATKCSLTAAGAIDGDLHECS |
Ga0209377_12443161 | 3300026334 | Soil | MKDQNRVLVRRGARDLSGEEVEQVCGGLRTATKCTLTLAGASDGDTHSECGADIA |
Ga0209059_12537262 | 3300026527 | Soil | MNNQNRVLARKGARDLTEKEVEQVCGGLRTATKCSVTAAGAIDGDLHECS |
Ga0209811_100229553 | 3300027821 | Surface Soil | MNDQNRVLIRRGARDLNEQEVEQVCGGLRTATKCSVTAAGAIDGDLHECS |
Ga0209811_101342552 | 3300027821 | Surface Soil | MTKGEKSMNDQNRVLVRRGARVLNEEEVEEVCGGLRTATKCTLTIAGAIDGDLHSECGGD |
Ga0209488_103827673 | 3300027903 | Vadose Zone Soil | MKDHNRVLVRRGARDLTEQEVEQVCGGLRTATKCAVTAAGAIDGDLHECS |
Ga0209583_100265825 | 3300027910 | Watersheds | MNDQNRVLLRRGARDLSGEEVEQVCGGLRTATKCTVTVGGASDGDTHSECGADIA |
Ga0075384_114500652 | 3300030841 | Soil | MNDQNRVLARRGARDLDENEIERVAGGLRTATKCSVTPAGALDGDTFHSECGSPDQ |
Ga0075372_110142184 | 3300030853 | Soil | MNDQDRVLIRRGARDMTEQEVEQVAGGLRTATKCTLTAAGALDGD |
Ga0075385_114478642 | 3300030854 | Soil | MNDQDRVLIRRGARDMTEQEVEQVAGGLRTATKCTLTAAGALDGDLHECS |
Ga0075385_115383621 | 3300030854 | Soil | MKDQNRVLARRGARDLDENEIERVAGGLRTATKCSVTPAGALDGDTFHSECGSPDQ |
Ga0075386_120624504 | 3300030916 | Soil | MNDQNRVLARRGARDLNEQEIDQVCGGLRTATKCIFSAAGALHGDLHECS |
Ga0075382_118002561 | 3300030917 | Soil | MKDQNRVLARRGARDLDEHEIERVAGGLRTATKCSVTPAGALDGDTFHSECGSPDQ |
Ga0075382_118002562 | 3300030917 | Soil | MNDQNRVLARRGARDLDEHEIDQVCGGLRTATKCSLTAAGALDGDLHECS |
Ga0170834_1105706361 | 3300031057 | Forest Soil | EKSMNDQNRVLVRRGARDLTEKEVEQVCGGLRTATKCSVTAAGKIDGDLHECS |
Ga0170834_1106078432 | 3300031057 | Forest Soil | MKDQNRVLARRGARDLDENEIERVAGGLRTATKCSVTPAGALDGDT |
Ga0170824_1087302592 | 3300031231 | Forest Soil | MNDQNRVLARRGARDLNEQEIDQVCGGLRTATKCSLTAAGALDGDLHECS |
Ga0170820_136514721 | 3300031446 | Forest Soil | MGPIMKGENTMSDQNRVLARRGARDLTGEEVEQVCGGLRTATKCSVTAAGKIDGDLHECS |
Ga0170818_1023389293 | 3300031474 | Forest Soil | MSDQNRVLARRGARDLTGEEVERVCGGLRTATKCSVTAAGKIDGDLHECS |
Ga0170818_1082268391 | 3300031474 | Forest Soil | EGEKSMNDQNRVLMRRGARDLTEKEVEQVCGGLRTATKCSVTAAGKIDGDLHECS |
Ga0307469_116479312 | 3300031720 | Hardwood Forest Soil | MNDQSRVLVRRGARDLSGEEVEQVCGGLRTATKCTLTVAGASDGDTHSECGADIA |
Ga0307479_121189882 | 3300031962 | Hardwood Forest Soil | MNEQNRVLVRRGARDLTGEEVEQVCGGLRTATKCSVTAAGAIDGDLHECS |
Ga0310811_101142273 | 3300033475 | Soil | MNDQNRVLVRRGARDLTGEEVEQVCGGLKTATKCSVTAAGKIDGDLHECS |
Ga0316624_102253782 | 3300033486 | Soil | MNDQNRVLLRRGARDLTGEEVEQVCGGLRTATKCSVTAAGSIDGDLHECS |
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