Metagenome / Metatranscriptome Family F061326

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061326
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	77 residues
Representative Sequence	MPRGKDKNKDKKTEELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTNDPIGESNY
Number of Associated Samples	106
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.91 %
% of genes near scaffold ends (potentially truncated)	36.36 %
% of genes from short scaffolds (< 2000 bps)	77.27 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.727 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (8.333 % of family members)
Environment Ontology (ENVO)	Unclassified (55.303 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (71.212 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.84% β-sheet: 1.87% Coil/Unstructured: 67.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00834	Ribul_P_3_epim	40.91
PF13414	TPR_11	17.42
PF13432	TPR_16	7.58
PF14559	TPR_19	6.82
PF07676	PD40	6.82
PF13715	CarbopepD_reg_2	2.27
PF14362	DUF4407	0.76
PF01909	NTP_transf_2	0.76
PF13431	TPR_17	0.76
PF04397	LytTR	0.76
PF12706	Lactamase_B_2	0.76
PF13393	tRNA-synt_His	0.76
PF00515	TPR_1	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0036	Pentose-5-phosphate-3-epimerase	Carbohydrate transport and metabolism [G]	40.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.73 %
Unclassified	root	N/A	27.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.73 %
Unclassified	root	N/A	27.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.73 %
Unclassified	root	N/A	27.27 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	63.64 %
Unclassified	root	N/A	27.27 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	63.64 %
Unclassified	root	N/A	27.27 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	63.64 %
Unclassified	root	N/A	27.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	18.18 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	15.15 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	18.18 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	15.15 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	18.18 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	15.15 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	18.18 %
Terrimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas	2.27 %
Flavisolibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavisolibacter	0.76 %
Niabella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niabella	0.76 %
Niastella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella	0.76 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	18.18 %
Terrimonas ferruginea	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas → Terrimonas ferruginea	2.27 %
Niastella koreensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella → Niastella koreensis	0.76 %
Flavisolibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavisolibacter	0.76 %
Niabella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niabella	0.76 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502000\|ACOD_F64RS5002GA18D	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	541	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101395687	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	808	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101398703	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	634	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104530692	Not Available	500	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1055380	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	580	Open in IMG/M
3300000789\|JGI1027J11758_12395558	Not Available	539	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1001486	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	5221	Open in IMG/M
3300002090\|JGI24806J26614_1004681	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	3694	Open in IMG/M
3300002100\|JGI24809J26612_1005566	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3308	Open in IMG/M
3300002100\|JGI24809J26612_1035644	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300004114\|Ga0062593_101086496	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300004463\|Ga0063356_100118423	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas → Terrimonas ferruginea	2930	Open in IMG/M
3300005180\|Ga0066685_10216653	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1316	Open in IMG/M
3300005289\|Ga0065704_10358786	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	800	Open in IMG/M
3300005290\|Ga0065712_10327851	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300005294\|Ga0065705_10756520	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	628	Open in IMG/M
3300005327\|Ga0070658_11365022	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005328\|Ga0070676_10044940	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2572	Open in IMG/M
3300005329\|Ga0070683_100747873	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella → Niastella koreensis	937	Open in IMG/M
3300005330\|Ga0070690_100016704	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4403	Open in IMG/M
3300005332\|Ga0066388_100020389	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas → Terrimonas ferruginea	5777	Open in IMG/M
3300005332\|Ga0066388_101091809	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1350	Open in IMG/M
3300005332\|Ga0066388_102739089	Not Available	900	Open in IMG/M
3300005335\|Ga0070666_10860713	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	669	Open in IMG/M
3300005337\|Ga0070682_101897954	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300005338\|Ga0068868_100416395	Not Available	1162	Open in IMG/M
3300005338\|Ga0068868_101001554	Not Available	764	Open in IMG/M
3300005340\|Ga0070689_100470512	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1072	Open in IMG/M
3300005343\|Ga0070687_100113402	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1538	Open in IMG/M
3300005347\|Ga0070668_100374000	Not Available	1211	Open in IMG/M
3300005355\|Ga0070671_100074183	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas → Terrimonas ferruginea	2842	Open in IMG/M
3300005355\|Ga0070671_101482593	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005365\|Ga0070688_100182631	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1456	Open in IMG/M
3300005535\|Ga0070684_101466797	Not Available	643	Open in IMG/M
3300005544\|Ga0070686_100369592	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300005544\|Ga0070686_101553315	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	559	Open in IMG/M
3300005548\|Ga0070665_101126123	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300005617\|Ga0068859_100143359	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2462	Open in IMG/M
3300005617\|Ga0068859_100203886	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2063	Open in IMG/M
3300005718\|Ga0068866_10051778	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2092	Open in IMG/M
3300005764\|Ga0066903_100999400	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300005841\|Ga0068863_100121175	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2494	Open in IMG/M
3300005841\|Ga0068863_101115228	Not Available	794	Open in IMG/M
3300005985\|Ga0081539_10068454	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1915	Open in IMG/M
3300006163\|Ga0070715_10115994	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300006237\|Ga0097621_100986658	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300006358\|Ga0068871_101198968	Not Available	712	Open in IMG/M
3300006800\|Ga0066660_10325951	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1237	Open in IMG/M
3300006871\|Ga0075434_100094466	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niabella	2995	Open in IMG/M
3300006881\|Ga0068865_101852350	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	546	Open in IMG/M
3300006903\|Ga0075426_10146209	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1704	Open in IMG/M
3300009093\|Ga0105240_11028513	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	880	Open in IMG/M
3300009174\|Ga0105241_12369793	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	529	Open in IMG/M
3300009176\|Ga0105242_11977489	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	625	Open in IMG/M
3300009177\|Ga0105248_10414688	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1516	Open in IMG/M
3300009553\|Ga0105249_10773171	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1023	Open in IMG/M
3300010044\|Ga0126310_10402914	Not Available	975	Open in IMG/M
3300010044\|Ga0126310_11369556	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	575	Open in IMG/M
3300010048\|Ga0126373_10215417	Not Available	1870	Open in IMG/M
3300010359\|Ga0126376_10497188	Not Available	1128	Open in IMG/M
3300010362\|Ga0126377_10928974	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	934	Open in IMG/M
3300010375\|Ga0105239_11526263	Not Available	772	Open in IMG/M
3300010398\|Ga0126383_11054098	Not Available	902	Open in IMG/M
3300010403\|Ga0134123_11477915	Not Available	723	Open in IMG/M
3300011332\|Ga0126317_10554469	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	534	Open in IMG/M
3300011444\|Ga0137463_1005150	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4340	Open in IMG/M
3300011444\|Ga0137463_1023083	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2241	Open in IMG/M
3300012198\|Ga0137364_11217186	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	563	Open in IMG/M
3300012201\|Ga0137365_10065296	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2746	Open in IMG/M
3300012212\|Ga0150985_111639916	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300012212\|Ga0150985_112340650	Not Available	685	Open in IMG/M
3300012212\|Ga0150985_122109940	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1081	Open in IMG/M
3300012354\|Ga0137366_10147604	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1770	Open in IMG/M
3300012469\|Ga0150984_107011731	Not Available	752	Open in IMG/M
3300012469\|Ga0150984_109970644	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1400	Open in IMG/M
3300012469\|Ga0150984_123009782	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1448	Open in IMG/M
3300012960\|Ga0164301_10184296	Not Available	1314	Open in IMG/M
3300012961\|Ga0164302_10216680	Not Available	1190	Open in IMG/M
3300012987\|Ga0164307_11762785	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	525	Open in IMG/M
3300013306\|Ga0163162_13387884	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	509	Open in IMG/M
3300013308\|Ga0157375_10005688	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	10848	Open in IMG/M
3300013308\|Ga0157375_10740910	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1134	Open in IMG/M
3300014325\|Ga0163163_11111112	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	853	Open in IMG/M
3300014745\|Ga0157377_10069868	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2027	Open in IMG/M
3300014969\|Ga0157376_10221522	Not Available	1752	Open in IMG/M
3300015371\|Ga0132258_10953816	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2167	Open in IMG/M
3300015372\|Ga0132256_100144980	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2375	Open in IMG/M
3300015372\|Ga0132256_101926575	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	698	Open in IMG/M
3300015373\|Ga0132257_103738986	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	554	Open in IMG/M
3300015374\|Ga0132255_102709220	Not Available	758	Open in IMG/M
3300015374\|Ga0132255_103864926	Not Available	636	Open in IMG/M
3300017792\|Ga0163161_10072654	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2519	Open in IMG/M
3300017792\|Ga0163161_10809506	Not Available	788	Open in IMG/M
3300017927\|Ga0187824_10253915	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	611	Open in IMG/M
3300018482\|Ga0066669_10072954	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2277	Open in IMG/M
3300021363\|Ga0193699_10166168	Not Available	911	Open in IMG/M
3300021445\|Ga0182009_10479527	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	653	Open in IMG/M
3300021445\|Ga0182009_10491082	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	646	Open in IMG/M
3300025893\|Ga0207682_10509285	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	570	Open in IMG/M
3300025899\|Ga0207642_10252172	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavisolibacter	1002	Open in IMG/M
3300025903\|Ga0207680_10604619	Not Available	784	Open in IMG/M
3300025904\|Ga0207647_10251434	Not Available	1014	Open in IMG/M
3300025905\|Ga0207685_10674941	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	561	Open in IMG/M
3300025913\|Ga0207695_11730101	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	506	Open in IMG/M
3300025920\|Ga0207649_10215970	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1363	Open in IMG/M
3300025931\|Ga0207644_10668887	Not Available	865	Open in IMG/M
3300025931\|Ga0207644_10857121	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	761	Open in IMG/M
3300025932\|Ga0207690_11527086	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	558	Open in IMG/M
3300025937\|Ga0207669_10482573	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	988	Open in IMG/M
3300025938\|Ga0207704_10081553	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2093	Open in IMG/M
3300025938\|Ga0207704_10733104	Not Available	821	Open in IMG/M
3300025944\|Ga0207661_10258080	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1552	Open in IMG/M
3300025945\|Ga0207679_10745691	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	890	Open in IMG/M
3300025949\|Ga0207667_11819300	Not Available	573	Open in IMG/M
3300025960\|Ga0207651_10024476	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3736	Open in IMG/M
3300025986\|Ga0207658_11213856	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	689	Open in IMG/M
3300026067\|Ga0207678_10416713	Not Available	1164	Open in IMG/M
3300026088\|Ga0207641_10359485	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1390	Open in IMG/M
3300026089\|Ga0207648_10275139	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1505	Open in IMG/M
3300026095\|Ga0207676_10471210	Not Available	1187	Open in IMG/M
3300026121\|Ga0207683_11132584	Not Available	726	Open in IMG/M
3300028380\|Ga0268265_11903266	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	602	Open in IMG/M
3300028381\|Ga0268264_10210408	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1785	Open in IMG/M
3300031716\|Ga0310813_11635540	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	602	Open in IMG/M
3300031740\|Ga0307468_101318769	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	658	Open in IMG/M
3300032421\|Ga0310812_10107560	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1153	Open in IMG/M
3300033412\|Ga0310810_10050752	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	5055	Open in IMG/M
3300033412\|Ga0310810_10055354	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	4822	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	57.58%
Environmental	Environmental	42.42%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	56.82%
Terrestrial	Environmental → Terrestrial	39.39%
Aquatic	Environmental → Aquatic	3.03%
Arthropoda	Host-Associated → Arthropoda	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	25.76%
Roots	Host-Associated → Plants → Roots	2.27%
Freshwater	Environmental → Aquatic → Freshwater	1.52%
Sediment	Environmental → Aquatic → Sediment	1.52%
Symbiotic Fungal Gardens And Galleries	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	18.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.18%
Loam	Environmental → Terrestrial → Soil → Loam	12.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.76%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.76%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden	0.76%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	18.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.27%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.52%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Unclassified	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.06%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.03%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.27%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.27%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.27%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.52%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.52%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.76%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified → Fungus Garden	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.76%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502000	Fungus garden microbial communities from Atta colombica in Panama - dump bottom	Host-Associated	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300002090	Soil microbial communities from Manhattan, Kansas, USA - Sample 200um MDA	Environmental	Open in IMG/M
3300002100	Soil microbial communities from Manhattan, Kansas, USA - Sample 500um MDA	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ACODB_7096770	2040502000	Fungus Garden	KKPEEQAKVGDKLPGRNISEQKNIEQTRIENRREADLEDKTPAGDAGVEDNRNEKQADDPIGESNY
INPhiseqgaiiFebDRAFT_1013956871	3300000364	Soil	MPGGKNKNKDKKTDELRDETKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDN
INPhiseqgaiiFebDRAFT_1013987031	3300000364	Soil	MPGGKNKNKDKKTDELRDETKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNP
INPhiseqgaiiFebDRAFT_1045306921	3300000364	Soil	MNKKXKNISEDXKGERIRMEAKISNKMPGRNTSEKSDTEQSRLEKRREAGLEDKTPSGDAGPEDNQNNRQANDPIGETNY*
AP72_2010_repI_A01DRAFT_10553802	3300000579	Forest Soil	MSQSKNKKEQTQKLRNEAKIGGKLPGRNITEESEIEQTRIENRREADLDDKTPSGDGGVEDNMDKPEADDPIGESNY
JGI1027J11758_123955581	3300000789	Soil	MSRGKNKNKNKKTGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLDDKTPGGDGGPEDNPDQ
AP72_2010_repI_A001DRAFT_10014865	3300000893	Forest Soil	MSQSKNKKEQTQKLRNEAKIGGKLPGRNITEESEIEQTRIENRREADLDDKTPSGDGGVEDNMDKP
JGI24806J26614_10046813	3300002090	Soil	MNKKKKNISEDKKGERLRMEAKISNKMPGRNVSEQSDIEQTRVENRRQADLEDKTPAGDTGPEDNKRQANDPIGESNY*
JGI24809J26612_10055663	3300002100	Soil	MNKKKKNISEDKKGARLRMEAKISNKMPGRSTSEKSDIEQTRLENRREAGLEDKAPSGDAGPEDNQKNRQANDPIGETNY*
JGI24809J26612_10356441	3300002100	Soil	MSKRKNKEKKAEELREEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDVPDQRQANDP
Ga0062593_1010864961	3300004114	Soil	MTGRKNNDQGKKTEELRDEAKIGGKLPGHNTSEKADIEQTRIENRRQADLEDKTPGGDGGPEDNPDKRQ
Ga0063356_1001184231	3300004463	Arabidopsis Thaliana Rhizosphere	MARGKSKNKKTDELRDEAKIGGKLPGRNTSEKADIEQARIENRREADLDDKTPGGDGGPEDVPDQRQTNDSVGESNY*
Ga0066685_102166533	3300005180	Soil	MSRSANKNKNKKNKEGREQAKPGDNLPVRNISEQLEIEQTRIENRREADLEDKTHAGDAGVEDNKDVRQANDPIGESNY*
Ga0065704_103587861	3300005289	Switchgrass Rhizosphere	EFLGCLIKLIMPKADDKNKKTENLRDDAKIGDKLPGRNTTEKFDIEQTRTENRREADLEDKTPAGDAGVEDNKNQPEADDPIGESNY*
Ga0065712_103278512	3300005290	Miscanthus Rhizosphere	MSRRKSKDQDKKTDELRDEATIGGNLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPNERQVNDPMGESNY*
Ga0065705_107565202	3300005294	Switchgrass Rhizosphere	MPKADDKNKKTENLRDDAKIGDKLPGRNTTEKFDIEQTRTENRREADLEDKTPAGDAGVEDNKNQPEADDPIGESNY*
Ga0070658_113650222	3300005327	Corn Rhizosphere	FFDKTRNILMSRRKSKDQDKKTDELRDEATIGGNLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTNDPIGESNY*
Ga0070676_100449402	3300005328	Miscanthus Rhizosphere	MPRRKNKNKDKTPEELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQANDPMGESNY*
Ga0070683_1000087914	3300005329	Corn Rhizosphere	LWHEFFDKTRNILMSRRKSKDQDKKTDELRDEATIGGNLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPNERQVKDPMGESNY*
Ga0070683_1007478732	3300005329	Corn Rhizosphere	MSKQKNKQEDKKTDDLRDEAKIGGKLPGRNVSEKAEIEQTRIENRREAGLDDKTPGGDGGPEDNRDQRQADDPIGESNY*
Ga0070690_1000167046	3300005330	Switchgrass Rhizosphere	MPGGKDKNKDKKPGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTDDPIGESNY*
Ga0066388_1000203897	3300005332	Tropical Forest Soil	MPRPEDKNKKTEDLDDDARIGGKLPGRNSTEKFDIEQTRIENRREADLDDKTPAGDAGVEDNKDQPEANDPIGESNY*
Ga0066388_1010918092	3300005332	Tropical Forest Soil	MPRTEDKDKKTGDPRDDAKFGDKLPGPNTTEKFDIEQTRIENRREADLDGKTPAGDAGVEDNKDQPEANDPIGESNY*
Ga0066388_1027390891	3300005332	Tropical Forest Soil	MPKEKDEGKNKRIGELRDEAKIGGKLPGRSTSEKADIEQTRIENRREADLEDKTPGGDGGPEDVPDQRQGDDPGESTY*
Ga0068869_1000628722	3300005334	Miscanthus Rhizosphere	LWHEFFDKTRNILMSRRKSKDQDKKTDELRDEATIGGNLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPNERQVNDPMGESNY*
Ga0070666_108607132	3300005335	Switchgrass Rhizosphere	LRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQANDPMGESNY*
Ga0070682_1018979541	3300005337	Corn Rhizosphere	HEFLTFIRKRFMSRRKDKNKDKTPEELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQANDPMGESNY*
Ga0068868_1004163952	3300005338	Miscanthus Rhizosphere	MSKGKDKNKDKKTGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTDDPIGESNY*
Ga0068868_1010015541	3300005338	Miscanthus Rhizosphere	MAKRSNRGKGKETEELRNEAKIDGKPPGRNTTEKAEIEQTRIENRREADLEDKTPGGDGGPEDNRD
Ga0070689_1004705121	3300005340	Switchgrass Rhizosphere	ELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQANDPMGESNY*
Ga0070687_1001134022	3300005343	Switchgrass Rhizosphere	MPRRKNKNKDKTPEQLRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQANDPMGESNY*
Ga0070668_1003740001	3300005347	Switchgrass Rhizosphere	MSRAKNKKQDKKTEELRDEAKIGGQLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNNERQANDPIGESNY*
Ga0070671_1000741831	3300005355	Switchgrass Rhizosphere	RDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTNDPLGESNY*
Ga0070671_1014825932	3300005355	Switchgrass Rhizosphere	MAKGKNKNKDKKSGELRDEAKIGGKLPGRNVSEKADIEQTRIENRREADLEDKTPGGDGGPEDNRDQRQTDDPIGESNY*
Ga0070688_1001826311	3300005365	Switchgrass Rhizosphere	KRFMPRRKNKNKDKTPEELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQANDPMGESNY*
Ga0070684_1014667971	3300005535	Corn Rhizosphere	MSKQKNKQKDKKTDDLRDEAKIGGKLPGRNVSEKAEIEQTRIENRREAGLDDKTPGGDGGPEDNRD
Ga0070686_1003695921	3300005544	Switchgrass Rhizosphere	MPGGKDKNKDKKPGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTNDPIGESNY*
Ga0070686_1015533151	3300005544	Switchgrass Rhizosphere	MSRAKNKKQDKKTEGLRDEAKIGGQLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNIERQANDPIGE
Ga0070665_1011261231	3300005548	Switchgrass Rhizosphere	MSRRKSKDQDKKTDELRDEATIGGNLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPNERQVKDPMGESNY*
Ga0068859_1001433592	3300005617	Switchgrass Rhizosphere	MSRAKNKKQDKKTEGLRDEAKIGGQLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNNERQANDPIGESNY*
Ga0068859_1002038862	3300005617	Switchgrass Rhizosphere	LRNEAKIDGKPPGRNTTEKAEIEQTRIENRREADLEDKTPGGDGGPEDNRDDRQADDPIGESNY*
Ga0068866_100517783	3300005718	Miscanthus Rhizosphere	MSKGKDKNKDKKTRELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQANDPMGESNY*
Ga0066903_1009994001	3300005764	Tropical Forest Soil	MPGPEEKNKKTKDSRDDAKIGGKLPGRNSTEKFDIEQTRIENRRAADLDDKTPAGDARVEDNKDQPEADDPIGESNY*
Ga0068863_1001211753	3300005841	Switchgrass Rhizosphere	MDTPGNEKRDNKGNELRNEAKIGGKTPGRNVSEKMDIEQTRIENRREADLDDKTPAGDAGVEDNVQPQADDPIGESNY*
Ga0068863_1011152282	3300005841	Switchgrass Rhizosphere	MPRRKNKNKDKTPEQLRDEAKIGGKLPSRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQANDPMGESNY*
Ga0081539_100684541	3300005985	Tabebuia Heterophylla Rhizosphere	MNNKNKKISDDKKGERLRMEAKISNKMPGRNKSEKSDIEQTRLEYRRDADLEDKNPAGDAGPEDSKNVNQENDPMGESNY*
Ga0070715_101159942	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPGGKDKNKDKKTGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTNDPLGESNY*
Ga0097621_1009866581	3300006237	Miscanthus Rhizosphere	KPGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTNDPLGESNY*
Ga0068871_1011989682	3300006358	Miscanthus Rhizosphere	MPRRKNKNKDKTPEELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQANDPMGES
Ga0066660_103259512	3300006800	Soil	MVPPEDKKGKKTTQDLGKEPGIGDKHPGRNANENSDTEQTRIENRREADLEDKTPAGDAGVEDNTDERQANDPIGESNY*
Ga0075434_1000944664	3300006871	Populus Rhizosphere	MNKKNKNISEDKKGERLRMEAKISNKMPGRNVTSKPDIEQTRLENRRELDLEDKTPAGDAGVEDNKTGRQSNDPIGESNY*
Ga0068865_1018523501	3300006881	Miscanthus Rhizosphere	MPGGKDKNKDKKTGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTNDPIGESNY*
Ga0075426_101462091	3300006903	Populus Rhizosphere	MSKSGNKNRNKKSKELPEQAKIGNKLPGRTISEVSEIEQTRIENRREADLEDKTPAGDAGVEDNKNVRQVNDPIGESNY*
Ga0105240_110285132	3300009093	Corn Rhizosphere	MSKEKNKSKDKKTDELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTDDPIGESNY*
Ga0105241_123697931	3300009174	Corn Rhizosphere	KNKEQDRKSEELREEAKIGGKLPGRNVTEKADIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQANDPMGESNY*
Ga0105242_119774891	3300009176	Miscanthus Rhizosphere	MSKEKNKSKDKKTDELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDDTDQRQANDPIGESNY*
Ga0105248_104146881	3300009177	Switchgrass Rhizosphere	NEKIIFMSKGKDKNKDKKTGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTNDPIGESNY*
Ga0105249_107731712	3300009553	Switchgrass Rhizosphere	MPGGKDKNKDKKTGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTDDPIGESNY*
Ga0126310_104029141	3300010044	Serpentine Soil	MSNFGDKNKDKKGRELREEAAIGGEIPGRNTSEKSDIEQTRIENRREADLDDKTPAGDAGAEDNNDQ
Ga0126310_113695562	3300010044	Serpentine Soil	MENSKDKNSDKTGKELREDARIGGKTPGRNVTEQSDIEQTRIENRREADLDDKTPSGDGGPEDVNRNENKDPLGESNY*
Ga0126373_102154172	3300010048	Tropical Forest Soil	MAFISLWHEFFGLLLKMFMKSSKNKKEDKKTNLPGDEAGVGGKLPGWNTSEKEEIEQARVENRREADLDDKTPAGDSGPEDDNNNRQADDPIGESNY*
Ga0126376_104971882	3300010359	Tropical Forest Soil	MPRPEDKDKKTEDLSDDAKIGRRKSTGKFDIERTRIENRREADLEDKTPAGDAGVDDNKEERQADDPIGESNY*
Ga0126377_109289742	3300010362	Tropical Forest Soil	VPTSEDKSKKTDDLGDNAKIGGKFPGRNSAEKFDIEQTRVENRREADLDDKTPAGDAGVEDNKDQPEANDPIGETNY*
Ga0105239_115262632	3300010375	Corn Rhizosphere	MPGGKDKNKDKKPGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTDDPIGES
Ga0126383_110540982	3300010398	Tropical Forest Soil	MNFFGLLLKMFMKRSKNKKEGKKTNQPGDEARIGGKLPGRNTSEKEEIEQARVENRREADLDDKTPAGDSGPEDDNNNRQADDPIGESNY*
Ga0134123_114779152	3300010403	Terrestrial Soil	MSRAKNKKQDKKTEELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQANDPMGESNY*
Ga0126317_105544692	3300011332	Soil	VMSKAKDKNKDQKTEELRDEAKIGGKLPGRNVTEKADIEQTRIENRREADLDDKTPAGDAGPEDDESRQANDPIGESNY*
Ga0137463_10051503	3300011444	Soil	MNKKNISADKKGERLRMEAKISNKAPGRNISEKSDMEQTRIENRREADLEDKTPAGDAGVEDNKDERQANDPIGESNY*
Ga0137463_10230834	3300011444	Soil	LRMEAKISNKAPGRNISEKSDMEQTRIKNRREADLEDKTPDGDAGVEDNKDERQANDPIGESNY*
Ga0137364_112171861	3300012198	Vadose Zone Soil	KTTDELRDEAKIGGKLPGRNGSEKFDIEQTRIENRRQADLEDKTPAGDAGVEDNKDERQEDDPVGESTY*
Ga0137365_100652964	3300012201	Vadose Zone Soil	MSKSGNKKNKQLREEAKIGNEAPGLNTSEQLEAEQTRIENRREADLEDKTPAGDAGVEDNKNVRQANDPIGESNY*
Ga0150985_1116399162	3300012212	Avena Fatua Rhizosphere	LRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQPQANDPIGESNY*
Ga0150985_1123406501	3300012212	Avena Fatua Rhizosphere	KKSEELRDEAKIGGKLPGRNTSEEADIEQTRVENRREADLEDKTPGGDGGPEDNPDQRQANDPIGESNY*
Ga0150985_1221099402	3300012212	Avena Fatua Rhizosphere	MQSEKDKNKNKKAEELRDEAKIGGKLPGRNASEKADIEQTRIENRREADLEDKTPGGDGGPEDVPDSRQTNDPIGESNY*
Ga0137366_101476042	3300012354	Vadose Zone Soil	MSKSGNKKNKQLPEEAKIGNEAPGLNTSEQLEAEQTRIENRREADLEDKTPAGDAGVEDNKDVRRANDPIGESNY*
Ga0150984_1070117311	3300012469	Avena Fatua Rhizosphere	KNKNKNKKSEELRDEAKIGGKLPGRNTSEEADIEQTRVENRREADLEDKTPGGDGGPEDNPDQRQANDPIGESNY*
Ga0150984_1099706441	3300012469	Avena Fatua Rhizosphere	DKNKNKKAEELRDEAKIGGKLPGRNASEKADIEQTRIENRREADLEDKTPGGDGGPEDVPDSRQTNDPIGESNY*
Ga0150984_1230097821	3300012469	Avena Fatua Rhizosphere	KDKNKNKKAEELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQPQANDPIGESNY*
Ga0164301_101842962	3300012960	Soil	MPGGKNKNKNKKTEELRDEAKIGGKLPGRNTSEKAELEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTDDPIGESNY*
Ga0164302_102166802	3300012961	Soil	MPRGKDKNKDKKTEELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTNDPLGESNY*
Ga0164307_117627851	3300012987	Soil	LRDEANIGDKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNNERQANDPIGESNY*
Ga0163162_133878841	3300013306	Switchgrass Rhizosphere	GELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTDDPIGESNY*
Ga0157375_1000568813	3300013308	Miscanthus Rhizosphere	MPGEKDKNKDKKPGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTNDPIGESNY*
Ga0157375_107409102	3300013308	Miscanthus Rhizosphere	MPRRKNKNKDKTPEELRDEAKIGGKLPGRNTSEKAHIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQANDPMGESNY*
Ga0163163_111111122	3300014325	Switchgrass Rhizosphere	DINRKNFMAKRSNRGKKKTDELRNEAKIDGKPPGRNTTEKAEIEQTRIENRREADLEDKTPGGDGGPEDNRDERQADDPIGESNY*
Ga0157377_100698682	3300014745	Miscanthus Rhizosphere	MPRRKNKNKDKTPEELRDEAKISGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQANDPMGESNY*
Ga0157376_102215221	3300014969	Miscanthus Rhizosphere	MAKRSNRGKKKTEELRNEAKIDGKPPGRNTTEKAEIEQTRIENRREADLEDKTPGGDGGPEDNRDDRQADDPIGESNY*
Ga0132258_109538162	3300015371	Arabidopsis Rhizosphere	MSRGKNKNKDKKARELRDEARIGGKLPRRNTSKKADIEQTRIESRREADLEDKTPGGDAGPEDNFDLRQTNDPLGESNY*
Ga0132256_1001449803	3300015372	Arabidopsis Rhizosphere	MSRAKNKKQDKKTEELRDEAKIGGQLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEYNNERQANDPIGESNY*
Ga0132256_1019265752	3300015372	Arabidopsis Rhizosphere	AKTSEELRDEARIGGKLPGRNVTEKADIEQARIENSREADFEDKTPAGDGGPEDNPDQRQTDDPIGESNY*
Ga0132257_1037389861	3300015373	Arabidopsis Rhizosphere	MSRGKNKNKDKKAQELRDEARIGGKLPGRNTSEKADVEQTRIESRREADLEDKTPGGDAGPEDNFDLRQTNDPLGES
Ga0132255_1027092201	3300015374	Arabidopsis Rhizosphere	MSKQKNKGHDKKTEELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGAPEDNPDQPQANDPIGESNY*
Ga0132255_1038649261	3300015374	Arabidopsis Rhizosphere	MSKGKSKDNKTDELRDEAKIGNKLPGRNISEKADIEQTRIENRREADLEDKNPGGDGGPEDNPDQRQADD
Ga0163161_100726544	3300017792	Switchgrass Rhizosphere	MSKEKDKNKDKKPGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTNDPIGESNY
Ga0163161_108095061	3300017792	Switchgrass Rhizosphere	MPRRKNKNKDKTPEELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQANDPMGESNY
Ga0187824_102539151	3300017927	Freshwater Sediment	NFFMSRSRSKKRDRRTEELRNEARIGGELPGRNSSEKADIEQARIEHRREADLDDKTPAGDAGVEDNNVIRTDDPIGESNY
Ga0066669_100729541	3300018482	Grasslands Soil	MSRSANKNKNKKSKEGREQAKPGNKLPGQNISDQSEIEQTRIENRREADLEDKTPAGDAGVEDNKDVRQANDPIGESNY
Ga0193699_101661682	3300021363	Soil	MKKSAGKNKDQKGKELRKEAEIGDKIPGRNITEQSDIEQTRIENRREADVEDKTPAGDGGPEDSGNERQASDPMGETNY
Ga0182009_104795271	3300021445	Soil	LKNLMPGQKHKKQNNQTEELRDEASIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDDPNERQANDPIGESNY
Ga0182009_104910822	3300021445	Soil	MSKSKNKNQDQSSEDLRDEARIGGKLPGRNVSEKADIEQTRIENRREADLDDKTPAGDAGPEDNDQQQANDPIGESNY
Ga0207682_105092852	3300025893	Miscanthus Rhizosphere	GTNFLTQRKNIFMPGGKDKNKDKKPGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNNERQANDPIGESNY
Ga0207642_102521722	3300025899	Miscanthus Rhizosphere	MPGGKDKNKDKKTGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTDDPIGESNY
Ga0207680_106046191	3300025903	Switchgrass Rhizosphere	MPGGKDKNKDKKPGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTDDPIGESNY
Ga0207647_102514341	3300025904	Corn Rhizosphere	MSRRKSKDQDKKTDELRDEATIGGNLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPNERQVKDPMGESNY
Ga0207685_106749411	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	FLLWHEFLTQRKNIFMPGGKDKNKDKKTGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTNDPLGESNY
Ga0207695_117301011	3300025913	Corn Rhizosphere	MSKEKNKSKDKKTDELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTDDPIGESNY
Ga0207649_102159702	3300025920	Corn Rhizosphere	MPGGKDKNKDKKPGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTNDPIGESNY
Ga0207649_103570842	3300025920	Corn Rhizosphere	LWHEFFDKTRNILMSRRKSKDQDKKTDELRDEATIGGNLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPNERQVKDPMGESNY
Ga0207681_109316842	3300025923	Switchgrass Rhizosphere	LWHEFFDKTRNILMSRRKSKDQDKKTDELRDEATIGGNLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPNERQVNDPMGESNY
Ga0207644_106688872	3300025931	Switchgrass Rhizosphere	MAKGKNKNKDKKSGELRDEAKIGGKLPGRNVSEKADIEQTRIENRREADLEDKTPGGDGGPEDNRDQRQTDDPIGESNY
Ga0207644_108571211	3300025931	Switchgrass Rhizosphere	MSRAKNKKQDKKTEGLRDEAKIGGQLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNNERQANDPIGESNY
Ga0207690_115270861	3300025932	Corn Rhizosphere	REEAKIGGKLPGRNVTEKADIEQTRIENRREADLEDKTPGGDGGPEDNPNQREANDPIGESNY
Ga0207669_104825732	3300025937	Miscanthus Rhizosphere	MPRRKNKNKDKTPEQLRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQANDPMGESNY
Ga0207704_100815531	3300025938	Miscanthus Rhizosphere	TEGLHDEAKIGGQLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNNERQANDPIGESNY
Ga0207704_107331041	3300025938	Miscanthus Rhizosphere	MPGGKDKNKDKKTGELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTNDPIGESNY
Ga0207661_102580802	3300025944	Corn Rhizosphere	MSKQKNKQEDKKTDDLRDEAKIGGKLPGRNVSEKAEIEQTRIENRREAGLDDKTPGGDGGPEDNRDQRQADDPIGESNY
Ga0207679_107456912	3300025945	Corn Rhizosphere	MSKQKNKQEDKKTDDLRDEAKIGGKLPGRNVSEKAEIEQTRIENRREAGLDDKTPGGDGGPEDTRDQRQADDSIGESNY
Ga0207667_118193001	3300025949	Corn Rhizosphere	MPRRKNKNKDKTPEELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQAN
Ga0207651_100244763	3300025960	Switchgrass Rhizosphere	MSRRKSKDQDKKTDELRDEATIGGNLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPNERQVNDPMGESNY
Ga0207658_112138562	3300025986	Switchgrass Rhizosphere	KKQDKKTEELRDEAKIGGQLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNNERQANDPIGESNY
Ga0207678_104167131	3300026067	Corn Rhizosphere	MSRRKSKDQDKKTDELRDEATIGGNLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPNE
Ga0207641_103594852	3300026088	Switchgrass Rhizosphere	MAKRSNRGKKKTEELRNEAKIDGKPPGRNTTEKAEIEQTRIENRREADLEDKTPGGDGGPEDNRDDRQADDPIGESNY
Ga0207648_102751392	3300026089	Miscanthus Rhizosphere	MPRGKDKNKDKKTEELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPDQRQTNDPIGESNY
Ga0207676_104712104	3300026095	Switchgrass Rhizosphere	MSRRKSKDQDKKTDELRDEATIGGNLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPNER
Ga0207683_111325841	3300026121	Miscanthus Rhizosphere	MSKGKDKNKDKKTRELRDEAKIGGKLPGRNTSEKDIEQTRIENRREADLEDKTPGGDGGPEDNSDQRQANDPIGESNY
Ga0268265_119032662	3300028380	Switchgrass Rhizosphere	MDIENIIRPKTPEELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPAQRQANDPMGESNY
Ga0268264_102104083	3300028381	Switchgrass Rhizosphere	MSHRKSKDQDKKTEELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNNERQANDPIGESNY
Ga0310813_116355402	3300031716	Soil	MPGRKNKDQDKKTEELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLDDKTPGGDGGPEDNLDARQADD
Ga0307468_1013187691	3300031740	Hardwood Forest Soil	MSRRKNKDQDKKTAQLRDEAKIGGKTPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDVPDQRETNDPMGESNY
Ga0310812_101075601	3300032421	Soil	FIDKTRNILMSRRKSKDQDKKTDELRDEATIGGNLPGRNTSEKADIEQTRIENRREADLEDKTPGGDGGPEDNPNERQVNDPMGESNY
Ga0310810_100507522	3300033412	Soil	MTGRKNNDQGKKTEELRDEAKIDGKLPGHNTSEKADIEQTRIENRRQADLEDKTPGGDGGPEDNPDKRQADDPIGETNY
Ga0310810_100553543	3300033412	Soil	MPGRKNKDQDKKTEELRDEAKIGGKLPGRNTSEKADIEQTRIENRREADLDDKTPGGDGGPEDNLDARQADDPIGESNY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061326

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences