Metagenome / Metatranscriptome Family F061330

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061330
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	64 residues
Representative Sequence	MKTARKKPTAAKLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLIRERQ
Number of Associated Samples	70
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.56 %
% of genes near scaffold ends (potentially truncated)	28.79 %
% of genes from short scaffolds (< 2000 bps)	88.64 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.273 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (28.788 % of family members)
Environment Ontology (ENVO)	Unclassified (46.212 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.485 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.58% β-sheet: 20.88% Coil/Unstructured: 61.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF14022	DUF4238	2.27
PF13356	Arm-DNA-bind_3	1.52
PF04226	Transgly_assoc	1.52
PF07045	DUF1330	1.52
PF00589	Phage_integrase	1.52
PF01066	CDP-OH_P_transf	1.52
PF13505	OMP_b-brl	1.52
PF03401	TctC	0.76
PF05402	PqqD	0.76
PF11146	DUF2905	0.76
PF04392	ABC_sub_bind	0.76
PF03797	Autotransporter	0.76
PF12883	DUF3828	0.76
PF07859	Abhydrolase_3	0.76
PF00378	ECH_1	0.76
PF17201	Cache_3-Cache_2	0.76
PF02265	S1-P1_nuclease	0.76
PF13467	RHH_4	0.76
PF13414	TPR_11	0.76
PF00239	Resolvase	0.76
PF03721	UDPG_MGDP_dh_N	0.76
PF10090	HPTransfase	0.76
PF01799	Fer2_2	0.76
PF13417	GST_N_3	0.76
PF12072	RNase_Y_N	0.76
PF00884	Sulfatase	0.76
PF12973	Cupin_7	0.76
PF13924	Lipocalin_5	0.76
PF04317	DUF463	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	1.52
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	1.52
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.52
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	1.52
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.52
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.76
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.76
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.76
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.76
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.76
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.76
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.76
COG3106	Ras-like GTP-binding stress-induced protein YcjX, DUF463 family	Signal transduction mechanisms [T]	0.76
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.27 %
Unclassified	root	N/A	47.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.27 %
Unclassified	root	N/A	47.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.27 %
Unclassified	root	N/A	47.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.36 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	18.18 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.12 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	17.42 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.79 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.52 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.76 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.76 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	17.42 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.27 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.76 %
unclassified Xanthobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae	0.76 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.76 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.76 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.76 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	17.42 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	0.76 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.76 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	0.76 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.76 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.76 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.76 %
Nitrobacter hamburgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	0.76 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	17.42 %
Bradyrhizobium sp. CCGUVB1N3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	0.76 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	0.76 %
Nitrobacter hamburgensis X14	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	0.76 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	0.76 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.76 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	0.76 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.76 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	17.42 %
Anaeromyxobacter diazotrophicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter diazotrophicus	0.76 %
Bradyrhizobium sp. CCGUVB1N3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	0.76 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	0.76 %
Nitrobacter hamburgensis X14	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	0.76 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.76 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	0.76 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.76 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16620511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1203	Open in IMG/M
2088090014\|GPIPI_17393505	All Organisms → cellular organisms → Bacteria → Proteobacteria	2351	Open in IMG/M
2228664022\|INPgaii200_c0689964	Not Available	668	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101539599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2643	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101947364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1085	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1004251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2315	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1089995	Not Available	538	Open in IMG/M
3300000955\|JGI1027J12803_101052296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	963	Open in IMG/M
3300000955\|JGI1027J12803_106590459	Not Available	926	Open in IMG/M
3300001867\|JGI12627J18819_10323111	Not Available	623	Open in IMG/M
3300004479\|Ga0062595_100366949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1012	Open in IMG/M
3300004479\|Ga0062595_101009268	Not Available	716	Open in IMG/M
3300004479\|Ga0062595_101829318	Not Available	578	Open in IMG/M
3300005179\|Ga0066684_10121315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1628	Open in IMG/M
3300005332\|Ga0066388_100334954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2159	Open in IMG/M
3300005332\|Ga0066388_100386283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2046	Open in IMG/M
3300005332\|Ga0066388_100540421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	1796	Open in IMG/M
3300005332\|Ga0066388_101302465	Not Available	1253	Open in IMG/M
3300005332\|Ga0066388_101690654	Not Available	1119	Open in IMG/M
3300005332\|Ga0066388_102645523	Not Available	915	Open in IMG/M
3300005332\|Ga0066388_103448305	Not Available	807	Open in IMG/M
3300005332\|Ga0066388_104105431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	742	Open in IMG/M
3300005332\|Ga0066388_105338585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	652	Open in IMG/M
3300005332\|Ga0066388_106696361	Not Available	580	Open in IMG/M
3300005332\|Ga0066388_106928773	Not Available	570	Open in IMG/M
3300005332\|Ga0066388_106997384	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300005332\|Ga0066388_107048090	Not Available	565	Open in IMG/M
3300005339\|Ga0070660_101185023	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300005435\|Ga0070714_100023329	All Organisms → cellular organisms → Bacteria → Proteobacteria	5081	Open in IMG/M
3300005435\|Ga0070714_100889025	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300005435\|Ga0070714_101096276	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300005436\|Ga0070713_100162521	All Organisms → cellular organisms → Bacteria	1994	Open in IMG/M
3300005436\|Ga0070713_100774939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	918	Open in IMG/M
3300005437\|Ga0070710_10055684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2236	Open in IMG/M
3300005451\|Ga0066681_10965642	Not Available	509	Open in IMG/M
3300005560\|Ga0066670_10137945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1412	Open in IMG/M
3300005713\|Ga0066905_100217229	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300005764\|Ga0066903_100065661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4586	Open in IMG/M
3300005764\|Ga0066903_100866498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1628	Open in IMG/M
3300005764\|Ga0066903_101092671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1469	Open in IMG/M
3300005764\|Ga0066903_101255081	Not Available	1380	Open in IMG/M
3300005764\|Ga0066903_101339657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	1340	Open in IMG/M
3300005764\|Ga0066903_101855122	Not Available	1153	Open in IMG/M
3300005764\|Ga0066903_102140840	Not Available	1077	Open in IMG/M
3300005764\|Ga0066903_102636581	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter diazotrophicus	974	Open in IMG/M
3300005764\|Ga0066903_103207563	Not Available	884	Open in IMG/M
3300005764\|Ga0066903_103450485	Not Available	852	Open in IMG/M
3300005764\|Ga0066903_103836894	Not Available	807	Open in IMG/M
3300005764\|Ga0066903_103961140	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300005764\|Ga0066903_104088109	Not Available	782	Open in IMG/M
3300005764\|Ga0066903_104190358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M
3300005764\|Ga0066903_104300425	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300005764\|Ga0066903_104755061	Not Available	722	Open in IMG/M
3300005764\|Ga0066903_105147815	Not Available	692	Open in IMG/M
3300005764\|Ga0066903_106777831	Not Available	595	Open in IMG/M
3300005764\|Ga0066903_106881839	Not Available	590	Open in IMG/M
3300005764\|Ga0066903_107142542	Not Available	578	Open in IMG/M
3300005764\|Ga0066903_107413048	Not Available	566	Open in IMG/M
3300005764\|Ga0066903_108205135	Not Available	534	Open in IMG/M
3300005764\|Ga0066903_108387529	Not Available	528	Open in IMG/M
3300006163\|Ga0070715_10028137	All Organisms → cellular organisms → Bacteria	2251	Open in IMG/M
3300006173\|Ga0070716_100050927	All Organisms → cellular organisms → Bacteria	2352	Open in IMG/M
3300006175\|Ga0070712_100626059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	913	Open in IMG/M
3300006755\|Ga0079222_10658476	Not Available	817	Open in IMG/M
3300006755\|Ga0079222_12434234	Not Available	525	Open in IMG/M
3300006794\|Ga0066658_10505099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M
3300006796\|Ga0066665_10931885	Not Available	670	Open in IMG/M
3300006806\|Ga0079220_10223539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1106	Open in IMG/M
3300006845\|Ga0075421_100720536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1157	Open in IMG/M
3300006847\|Ga0075431_100647005	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300006854\|Ga0075425_101253506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	841	Open in IMG/M
3300006854\|Ga0075425_101275037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	834	Open in IMG/M
3300006871\|Ga0075434_100614793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1106	Open in IMG/M
3300006871\|Ga0075434_101324161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis → Nitrobacter hamburgensis X14	731	Open in IMG/M
3300006871\|Ga0075434_101869077	Not Available	607	Open in IMG/M
3300006904\|Ga0075424_100506965	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300006904\|Ga0075424_101022666	Not Available	881	Open in IMG/M
3300006904\|Ga0075424_102164020	Not Available	586	Open in IMG/M
3300006954\|Ga0079219_12097643	Not Available	541	Open in IMG/M
3300009100\|Ga0075418_12026667	Not Available	627	Open in IMG/M
3300009156\|Ga0111538_11851675	Not Available	759	Open in IMG/M
3300009162\|Ga0075423_11629594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300009792\|Ga0126374_10587312	Not Available	820	Open in IMG/M
3300010046\|Ga0126384_10671018	Not Available	915	Open in IMG/M
3300010046\|Ga0126384_11490571	Not Available	633	Open in IMG/M
3300010048\|Ga0126373_10660063	Not Available	1102	Open in IMG/M
3300010048\|Ga0126373_12120238	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300010358\|Ga0126370_10349946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1194	Open in IMG/M
3300010358\|Ga0126370_11642169	Not Available	616	Open in IMG/M
3300010360\|Ga0126372_10606491	Not Available	1051	Open in IMG/M
3300010360\|Ga0126372_11758394	Not Available	662	Open in IMG/M
3300010361\|Ga0126378_12399032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300010362\|Ga0126377_10339090	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300010366\|Ga0126379_10878475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	998	Open in IMG/M
3300010366\|Ga0126379_10911454	Not Available	982	Open in IMG/M
3300010376\|Ga0126381_100518871	All Organisms → cellular organisms → Bacteria → Proteobacteria	1683	Open in IMG/M
3300010376\|Ga0126381_101145053	Not Available	1124	Open in IMG/M
3300010398\|Ga0126383_11944330	Not Available	676	Open in IMG/M
3300010863\|Ga0124850_1063110	Not Available	1141	Open in IMG/M
3300010999\|Ga0138505_100070393	Not Available	517	Open in IMG/M
3300012198\|Ga0137364_10225710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1378	Open in IMG/M
3300012971\|Ga0126369_10254473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	1730	Open in IMG/M
3300012971\|Ga0126369_11403457	All Organisms → cellular organisms → Bacteria → Proteobacteria	788	Open in IMG/M
3300012989\|Ga0164305_11238588	Not Available	649	Open in IMG/M
3300015357\|Ga0134072_10251430	Not Available	637	Open in IMG/M
3300015371\|Ga0132258_10516183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2990	Open in IMG/M
3300018431\|Ga0066655_10867697	Not Available	616	Open in IMG/M
3300018433\|Ga0066667_10640402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	888	Open in IMG/M
3300018482\|Ga0066669_10798382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300021168\|Ga0210406_10117624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2249	Open in IMG/M
3300021560\|Ga0126371_13235097	Not Available	551	Open in IMG/M
3300022726\|Ga0242654_10326310	Not Available	571	Open in IMG/M
3300025898\|Ga0207692_10025582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2759	Open in IMG/M
3300025905\|Ga0207685_10179389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	981	Open in IMG/M
3300025905\|Ga0207685_10772253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300025915\|Ga0207693_10740865	Not Available	760	Open in IMG/M
3300025916\|Ga0207663_10532657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	916	Open in IMG/M
3300025928\|Ga0207700_10047387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	3185	Open in IMG/M
3300025929\|Ga0207664_10301827	Not Available	1409	Open in IMG/M
3300025929\|Ga0207664_10906837	All Organisms → cellular organisms → Bacteria → Proteobacteria	791	Open in IMG/M
3300028784\|Ga0307282_10043382	Not Available	1988	Open in IMG/M
3300028784\|Ga0307282_10160980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1065	Open in IMG/M
3300028784\|Ga0307282_10254211	Not Available	844	Open in IMG/M
3300028784\|Ga0307282_10450764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	624	Open in IMG/M
3300028793\|Ga0307299_10158525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	852	Open in IMG/M
3300028819\|Ga0307296_10722995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	544	Open in IMG/M
3300028828\|Ga0307312_10741719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300028828\|Ga0307312_10966222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300028875\|Ga0307289_10268924	Not Available	701	Open in IMG/M
3300028875\|Ga0307289_10299590	Not Available	662	Open in IMG/M
3300030902\|Ga0308202_1100770	Not Available	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.64%
Host-Associated	Host-Associated	11.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.64%
Plants	Host-Associated → Plants	11.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.61%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.45%
Loam	Environmental → Terrestrial → Soil → Loam	42.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.85%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	29.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.03%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	28.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01564690	2088090014	Soil	MIGRLSLVGMSKRTNPKKPAKSWRVIIMRSRGELLGYVEALDRERAEAVAIKLFALDDDPRRRLLTERL
GPIPI_02039410	2088090014	Soil	MKIAKRKPTAPKLRSWRVVIMRSRGEYLGSVEAPDRERAEAVAIKQFESDQDQRRRLLIRERQ
INPgaii200_06899642	2228664022	Soil	KKPANLRSWRVIIIRGKGEYLGSVEAPDCDRAEAVAIKQFALDDDQRRRLLIRERD
INPhiseqgaiiFebDRAFT_1015395991	3300000364	Soil	KPANLRSWRVIIIRGKGEYLGSVEAPDCDRAEAVAIKQFALDDDQRRRLLIRERD*
INPhiseqgaiiFebDRAFT_1019473642	3300000364	Soil	VSWRTHPKKPAXVRSWRVHHRRSRGEYLGSVEAPDRERAVGVAIKQFDLDQDQQAVLLIRERP*
AF_2010_repII_A01DRAFT_10042512	3300000580	Forest Soil	VSRRTNPKQPLRSWRVIIMRSKGEHIGTVEAPDCERAEAVAIKQFDLDRDQRSRLLIRERQ*
AF_2010_repII_A100DRAFT_10899951	3300000655	Forest Soil	SCRTCPMKTARKKPTAAKLRSWRVIIMRSKGEHIGTVEAPDRERAEAVAIKQFALDDHQRSRLLIRSR*
JGI1027J12803_1010522962	3300000955	Soil	VSWRTHPKKPANVRSWRVHHRRSRGEYLGSVEAPDRERAVGVAIKQFDLDQDQQAVLLIRERP*
JGI1027J12803_1065904592	3300000955	Soil	ACHTSAMKTARKKPTAPNLRSWRVIIMRSRGEYLGSVEAPDRERAEAVAIKQFDLNQDQRGRLLVRTPIIALQ*
JGI12627J18819_103231111	3300001867	Forest Soil	VAYVCWRVAYPKRKKPIPAKLRSWRVIIVRSKGEYLGSVEAPDRERAKAVAVKLFDLDQDQRSRLLIRERM*
Ga0062595_1003669491	3300004479	Soil	MIGRLSLVGMSKRTNPKKPAKSWRVIIMRSRGELLGYVEALDRERAEAVAIKLFALDDDPRRRLLTERL*
Ga0062595_1010092682	3300004479	Soil	MKIAKRKPTAPKLRSWRVVIMRSRGEYLGSVEAPDRERAEAVAIKQFESDQDQRRRLLIRERQ*
Ga0062595_1018293181	3300004479	Soil	YLARVSRRTNPKKPASLRSWRVIIMRSRGEYLGSVEAPDRVRAEAVAIKLFELDQDQRRRRLIREQV*
Ga0066684_101213151	3300005179	Soil	DVIALHRARARLNTPYNLRSWRVVIIRSKGEYLGSVEAPDRERAGAAAIKQFDLDQDQRRRQLIRERS*
Ga0066388_1003349542	3300005332	Tropical Forest Soil	VPPRKITKQRPTAAKLRSWRVTIIRKHGQYLGTVEAPDCERAEAVAIKQFALDDDQRSRLLIRERP*
Ga0066388_1003862831	3300005332	Tropical Forest Soil	VSKRTNPKKPPRSWRVIIIRSKGEHLGSVEAPDRERAAAVAIKQFALDDDQRSRLLIRERL*
Ga0066388_1005404214	3300005332	Tropical Forest Soil	MISARKKSTTAKLRSWRVIIMRSKGEHLGTVEAPDRERAEAGAVKAFGLDADQRGRLLIRERQ*
Ga0066388_1013024651	3300005332	Tropical Forest Soil	MKTARKKPTAASLRSWRVIIIRAKGEYLGSVEAPDRERAEVVAIKQFALDDDQRSRLLIRERQ*
Ga0066388_1016906542	3300005332	Tropical Forest Soil	MKGARKKPASANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRKRP*
Ga0066388_1026455231	3300005332	Tropical Forest Soil	VRAEIILCSPKGRSPWRVIIIRSKGEYLGSVEAPDRERAAAVAIKQFDLDPDQRGRMLIRERL*
Ga0066388_1034483052	3300005332	Tropical Forest Soil	MKTARKKPTAAKLRSWRVIIMRSRGEHIGTVEAPDRERAEAAAIKQFALDDDQRSRLLIRERQP*
Ga0066388_1041054312	3300005332	Tropical Forest Soil	MKGARKKPTAANMRSWRVIIIRSKGEYLGSVEVPAGDRAEAIAIKQFDDQRSRLLNPGAALTGLRYRSG*
Ga0066388_1053385851	3300005332	Tropical Forest Soil	FVPGPRPRRPAAANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRERL*
Ga0066388_1066963611	3300005332	Tropical Forest Soil	MSRRTDPKKPANLRSWRVIIMRSKGEHIGTVEAPDREMAEAVAIKQFDLDQDQRRRLLSGSGFNRALT*
Ga0066388_1069287731	3300005332	Tropical Forest Soil	MKGVRKKPTAAKLRSWRVIIMRSKGEYLGSVEAPDREKAEAVAIKQFDLDQDQ
Ga0066388_1069973841	3300005332	Tropical Forest Soil	VHRAMPPRKITRQRPTAAKLRSWRVIIIRSKGEYFGSVEAPDRERAQAVAIKQFALDNDQRSRLLIRERL*
Ga0066388_1070480901	3300005332	Tropical Forest Soil	MLRPAPKKKKTTPTKLRSWRVIIMRSKGEHIGTVEAPDRERAEAVAVKQFELGQDQRRRLLIRERL*
Ga0070660_1011850231	3300005339	Corn Rhizosphere	LSGHYFGGVSSRTNLKKPANLRSWRVIIRRSRGEYLGSVEAPDRQRAEAVAIKQFELDDDQRRRLLIRERL*
Ga0070714_1000233294	3300005435	Agricultural Soil	VSRRTNPKKPASLRSWRVIIMRSRGEYLGSVEAPDRVRAEAVAIKLFELDQDQRRRRLIREQV*
Ga0070714_1008890252	3300005435	Agricultural Soil	MFGAMSRRTKPKKPANLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLIRLR*
Ga0070714_1010962762	3300005435	Agricultural Soil	GVSRRTNPKKPANLRSWRVIIRRSRGEYLGSVEAPDRQRAEAVAIKQFELDDDQRRRLLIRERL*
Ga0070713_1001625211	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSRRTKPKKPANLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLI
Ga0070713_1007749392	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSQKKKPAAANLRRWRVIIIRSEGEYLGSVEAPDRERAEAVTTKLFDLDQDQRSRLLIRERL*
Ga0070710_100556842	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLTTVSRRTNPKKPANLRSWRVIIRRSRGEYLGSVEAPDRQRAEAVAIKQFELDDDQRRRLLIRERL*
Ga0066681_109656421	3300005451	Soil	MKTARKMPTVTNLRSWAVTIIRSKGEYLDSVEAPRERAEAVAVKQFDLDQDQRSRLLIRERL*
Ga0066670_101379454	3300005560	Soil	MKGIRKKLAANLRSCCVIIIRSKGEYLGSVEAPRERAEAVAIKQFDLDQEQRSRLLIRKRA*
Ga0066905_1002172293	3300005713	Tropical Forest Soil	VSKRTNSPKPANLRSWRVIIIRSKGEYLGSVEAPDREKAEAVAIKQFALDDDQRSRLLIRERP*
Ga0066903_1000656618	3300005764	Tropical Forest Soil	VSQRTRLKKPAKLRSWRVIIMRSKGEHIGTVEAPDRERAEAVAIKQFALDDHQRSRLLIRSR*
Ga0066903_1008664983	3300005764	Tropical Forest Soil	MKTARKKPTAAKLRSWRVIIMRSKGEHIGTVEAPDRERAEAVAVKQFELDRDQRRRLLIRERL*
Ga0066903_1010926713	3300005764	Tropical Forest Soil	VPKRTHPKKPPRSWRVIIIRSKGEYLGSVEALDRERAEAIAIKQFALDNDQRSRLLIRERP*
Ga0066903_1012550812	3300005764	Tropical Forest Soil	MKTPKNITRQKPAAAKLRSRRVIIIRSKGEHLGTVEAPDRERAEAVAIKEFALDGDQRSRLLIRERH*
Ga0066903_1013396572	3300005764	Tropical Forest Soil	VRPCSVLRISIMSRRTHPKEPANLRSWRVIIMRSKGEHIGTVEAPDRQRAEAVAIKQFELDQDQRRRLLIRERL*
Ga0066903_1018551222	3300005764	Tropical Forest Soil	MLQRTGWIHRAVSPKKITRQRPAAANLRSWRVIIIRSKREYPGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRERT*
Ga0066903_1021408401	3300005764	Tropical Forest Soil	VPPRKITRQRPTAANLRSWRVIIIRSKGEYLGSVEAPNRERAEAVAVKEFGLDAEQRGRLLIREQS*
Ga0066903_1026365812	3300005764	Tropical Forest Soil	MKGARKKPAAANLRSWRVIIMRSRGEHIGTVEAPDRERAEAVAIKQFALDDDQRSRLLIRERL*
Ga0066903_1032075633	3300005764	Tropical Forest Soil	VSKRAKPRNPAQQRSWRVVLIRAKREHLGVVQAPDRERAEAVAIKEFGLDKRGRLLIREQS*
Ga0066903_1034504852	3300005764	Tropical Forest Soil	VSRRIPLKKPTKLRSWRVIIMRSKGEHIGTVEAPDRERAEAVAIKQFELDQNQRRRLLIRERL*
Ga0066903_1038368943	3300005764	Tropical Forest Soil	MKDAGEKPAAANLRSWRAIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRERL*
Ga0066903_1039611401	3300005764	Tropical Forest Soil	MKGARNKPAAAKLRSWRVIIIGSRGEYLASVEAPDRERAEAVAIKQFALDDDQRSRLLIRERL*
Ga0066903_1040881092	3300005764	Tropical Forest Soil	VSKRTDPKKPPRSWRVIIIRSKGEHLGSVEAPDRERAEAVAIRQFALDDDQRSRLLIRERQ*
Ga0066903_1041903582	3300005764	Tropical Forest Soil	PAAANLRSWRVIIIRSKGEHLGTVEAPDRERAEAVAVKRFALDDDQRSRLLIRERQ*
Ga0066903_1043004251	3300005764	Tropical Forest Soil	VSKRNPQKPANLRSWRVIIIRSRGEYLGSVEAPDRDRAEAVAVKQFALDADQRRRLLIRERL*
Ga0066903_1047550613	3300005764	Tropical Forest Soil	MYAAVLRPAPKKKKTTAAKLRSWRVIIMRSKGEHIGTVEAPDRERAEAVAIKQFALDGDQRRRLLIRERS*
Ga0066903_1051478153	3300005764	Tropical Forest Soil	LSTEEGLKPAANLRSWRVIVIRNKGEYLGSVEAPDRERVEAVAIKQFALDDDQRSRLLIRERP*
Ga0066903_1067778312	3300005764	Tropical Forest Soil	CGHYLASVSRRIPLKKLTKLRSWRVIIMRSKGEHIGTVEAPDRERAEVVAIKQFDLDQERRRRLLIRERV*
Ga0066903_1068818392	3300005764	Tropical Forest Soil	MQHGRDMKAPNKSKRVAAKLRSWRVIIMRSKGEHIGTVEAPDRERAEAAAIKQFDLDQDQRRRLLIRERH*
Ga0066903_1071425422	3300005764	Tropical Forest Soil	MSRRTDPKKPANLRSWRVIIMRSKGEHIGTVEAPDREMAEAVAIKQFDLDQDQQRRLLSGSGFNRALT*
Ga0066903_1074130481	3300005764	Tropical Forest Soil	MKGVRKKPTATHLRSWRVIIMRSKGEYLGSVEAPDREKAEAVAIKQFDLDQDQRGRLLILERL*
Ga0066903_1082051351	3300005764	Tropical Forest Soil	MKTARKKPTAAKLRSWRVIIMRSKGEHIGTVEAPDRERAEAVAIKQFALDDHQRSRLLIRSR*
Ga0066903_1083875291	3300005764	Tropical Forest Soil	LSTNDGRTKENPNLRSWRVIIIRSKGEYAPSRERPEAVAIKQFALEDDQCSRLLIRERQ*
Ga0066652_1003724581	3300006046	Soil	LQGPVPAHYLAAVSPRKITRQRPAAAKLRSWAVTIIRSKGEYLGSVEAPDREQAETVAIKQFDLDQDQRSRLLIRERL*
Ga0070715_100281372	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKTARKKPTAAKLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLIRLR*
Ga0070716_1000509272	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MFGAMSRRTKPKKPANLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLIRERQ*
Ga0070712_1006260593	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKPAGKKPAAANPRSWRVIIIRSKGEYLGSVEAPDRERAAAVAIKQFQLDTDQRSRLLIRERV*
Ga0079222_106584762	3300006755	Agricultural Soil	MKAPNKTTKSKRVAAKLRSWRVIIMRHRGEHLGTVEAPERERAELVAVKLFDLDDDRRRRLLIRERS*
Ga0079222_124342342	3300006755	Agricultural Soil	VSSRTNLKKPANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAVKQFDLDQDQRSRLLIRERV*
Ga0066658_105050993	3300006794	Soil	MKGIRKKLAANLRSCCVIIIRSKGEYLGSVEHPRERAEAVAIKQFDLDQEQRSRLLIRKRA*
Ga0066665_109318851	3300006796	Soil	MYDGVLRSPRNKPTAAKLRSWAVTIILGKGEYLGSVEAPDRERAEAVAIKQFELDQDQRRRLLIRERP*
Ga0079220_102235392	3300006806	Agricultural Soil	MSKRIRPQKPPNLRSWRVIIIRSKGEYLGSVEAPDRERAELVAVKLFDLDRGQRSRLLIRERQ*
Ga0075421_1007205362	3300006845	Populus Rhizosphere	VSSRTNLKKPANLRSWRVIIIRSKGEYLGSIEAPDRERAEAVAIKQFALDQDQRRRVLIRERQ*
Ga0075431_1006470052	3300006847	Populus Rhizosphere	KLRSWRVIIMRSRGEYLGSLEAPDREKAEAVAIKLFALDGDQRRRLPIV*
Ga0075425_1012535061	3300006854	Populus Rhizosphere	PTAAKLRSWRVIIMRSKGENLGIVEALDRERAEAVAIKLFDLDQDQRSRLLIRERL*
Ga0075425_1012750372	3300006854	Populus Rhizosphere	MLTTVSRRTNPKKPANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAVKQFDLDQDQRSRLLIRERV*
Ga0075434_1006147933	3300006871	Populus Rhizosphere	VSQRTRLKKSAKLRSWRVVIMRSRGEYLGSVEAPDREKAEAVAIKLFALDGDQRRRLPIV
Ga0075434_1013241611	3300006871	Populus Rhizosphere	AAKLRSWRVIIMRHRGEHLGTVEAPNCKRAEAVAVKLFDLDHDQRRRLLIRERL*
Ga0075434_1018690772	3300006871	Populus Rhizosphere	MKTARKKPTAAKLRSWRVIVMRSRGEYLGSVEAPDREKAESVAIKLFALDDDQRSRLLILERL*
Ga0075424_1005069653	3300006904	Populus Rhizosphere	MKTARKKPTAAKLRSWRVIIMRSKGENLGIVEALDRERAEAVAIKLFDLDQDQRSRLLIRERL*
Ga0075424_1010226662	3300006904	Populus Rhizosphere	MKTAKRKPTAPKLRSWRVIIMRSRGEYLGSVEAPDREKAEAVAIKLFALDGDQRRRLPIV
Ga0075424_1021640202	3300006904	Populus Rhizosphere	VSSRTNLKKPANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAVKQFDLDQEQRSRLLIRERQ*
Ga0079219_120976432	3300006954	Agricultural Soil	GTKPANLRSWRVIIMRSRESERAEAVAIKQFGLDQDQRLRLLIRERQ*
Ga0075418_120266671	3300009100	Populus Rhizosphere	MKTAKRKPTAPKLRSWRVIIMRSRGEYLGSVEAPDREKAEAVAIKLFDLDQDQRGRLLILERQ*
Ga0111538_118516752	3300009156	Populus Rhizosphere	MKTARKKPTAAKLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLIRERQ*
Ga0075423_116295942	3300009162	Populus Rhizosphere	LLERWSLVTKRVQKRTAAKLRSWRVIIMRRKGEYLGSVEAPDRERAEAVAVKQFDLDQDQRSRLLIRERV*
Ga0126374_105873122	3300009792	Tropical Forest Soil	VSKRTNSPKPANLRSWHVIITRSKGEYLGSVEAPDRERAEAVAIKQFALDDDHRSRLLIRERP*
Ga0126384_106710181	3300010046	Tropical Forest Soil	MSRRTHPKEPANLRSWRVIIMRSKGEHIGTVEAPDRQRAEAVAIKQFELDQDQRRRLLIRERL*
Ga0126384_114905712	3300010046	Tropical Forest Soil	ANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDHRSRLLIRERP*
Ga0126373_106600633	3300010048	Tropical Forest Soil	VSKRTNPQKLLRSWRVIITRSKGEYLGSVEAPDRERAEAVAIKPFALDDDQRSRLLIRERP*
Ga0126373_121202382	3300010048	Tropical Forest Soil	VSRRIPLKKPTKLRSWRVIIMRSKGEHIGTVEAPDRERAKTVAVKQLELDQDQRRRLLIRERQ*
Ga0126370_103499461	3300010358	Tropical Forest Soil	TRHICYSLLCGDYLARVSRRIPLKKPTKRRSWRVIIMRSKGEHIGTVEAPDRERAEAVAIRQFELDQDQRRRLLIRERQ*
Ga0126370_116421691	3300010358	Tropical Forest Soil	VSKRTNPKKPANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRSRLLIRERV*
Ga0126372_106064912	3300010360	Tropical Forest Soil	VSKRTNSPKPANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDHRSRLLIRERP*
Ga0126372_117583941	3300010360	Tropical Forest Soil	MKGARKKPTAANMRSWRVIIIRSKGEYLGSVEVPAGDRAEAIAIKQFDNQRSRLLNPGAALTGLRYRSG*
Ga0126378_123990321	3300010361	Tropical Forest Soil	LSTLLKRTHPQKPPRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRERP*
Ga0126377_103390902	3300010362	Tropical Forest Soil	VSKRTNSSKPANLRSWRVIITRSKGEYLGSVEAPDRERAEAVAIKQFALDDDHRSRLLIRERP*
Ga0126379_108784752	3300010366	Tropical Forest Soil	VSKRTNSPKPANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRERL*
Ga0126379_109114541	3300010366	Tropical Forest Soil	CGHYLAGVSRRIPLKKPTKLRSWRVIIMRSKGEHIGTVEAPDSERAEAVAIKQFELDQNQRRRLLIRERL*
Ga0126381_1005188712	3300010376	Tropical Forest Soil	VRKRTSPKPATLRSWRVIIMRSKGEHIGTVEAPDRQRAEAVAIKQFELDQDQRRRLLIRERL*
Ga0126381_1011450531	3300010376	Tropical Forest Soil	KLRSWRVIIMRSKGEHIGTVEAPDRERAEAVAIKQFELDQDQRRRLLIRERL*
Ga0126383_119443301	3300010398	Tropical Forest Soil	VSKRTNSSKPANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRERP*
Ga0124850_10631102	3300010863	Tropical Forest Soil	VSKRTNSPKPANLRSWRVIITRSKGEYLGSVEAPDRERAEAVAIKQFALDDDHRSRLLIRERP*
Ga0138505_1000703932	3300010999	Soil	VCRRTNPKKPANLRSWRVIIIRSRGEYLGSVEAPDRERAEAVAIKQFALDDDQRRRLLIRERH*
Ga0137364_102257102	3300012198	Vadose Zone Soil	LRSWRVIVIRIKGEYLGSVEAPNHERAEAVPIKQFALDDDQPSRLLIRERLSPAPQVDLK
Ga0126369_102544731	3300012971	Tropical Forest Soil	VSKRTHPRKPANLRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRERP*
Ga0126369_114034571	3300012971	Tropical Forest Soil	RLVIATMLQRTGWIHRAVSPKKITRQRPAAANLRSWRVIIIRSKREYPGSVEAPDRERAEAVAIKQFALDDDQRSRLLIRERP*
Ga0164305_112385881	3300012989	Soil	MKTTRKKSTAAKLRSWRVIIMRSRGEYLGSVEAPDREKAESVAIKLFALDDDQRSRLLILERL*
Ga0134072_102514301	3300015357	Grasslands Soil	VSKRTHPKKAADFRSWRVIIIRSKGEYLGSVEAPDRERAEAVAIKQFELDQDQRRRLLIRERP*
Ga0132258_105161834	3300015371	Arabidopsis Rhizosphere	MRAIGFFDSVSKRTHPKKPAKSWRVVIMRSKGEYLGSVEAPDRERAEAVAIKLFDLDQDQRSRLLIREQV*
Ga0066655_108676971	3300018431	Grasslands Soil	MKGIRKKLAANLRSCCVIIIRSKGEYLGSVEAPDREWAEAVAIKQFALDDDQRSRLLIRERL
Ga0066667_106404021	3300018433	Grasslands Soil	LDSPRSADYPAPVSRRTNPQKPLRSWRVTIIRSKGEYLGSVEAPDRERAEAVAIKYFDLDQDQRGRLLILERS
Ga0066669_107983821	3300018482	Grasslands Soil	SVLRSPRKKAAAAKLRSWRIIIIRSKGEYLGSVEAPDRERAEAAAIKYFDLDQDQRGRLLILERS
Ga0210406_101176244	3300021168	Soil	MSRRIHPKKPANLRSRRVIIMRSRGEYLGSVEGPDRERAEAVAIKQYALDDDQRRRLLIRERQ
Ga0126371_132350971	3300021560	Tropical Forest Soil	VSKRTNSPKPANLRSWHVIITRSKGEYLGSVEAPNRERAEAVAIKQFALDDDHRSRLLIRERP
Ga0242654_103263101	3300022726	Soil	MMIARKKPTAAKLRSWRVIIMRNKGEYLGAVEAPDRERAEAVAIKQFALDQDQRRRLLVRERH
Ga0207692_100255823	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKTARKKPTAAKLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLIRLR
Ga0207685_101793891	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	KPKKPANLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLIRLR
Ga0207685_107722531	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKPAGKKPAAANPRSWRVIIIRSKGEYLGSVEAPDRERAKAVAVKQFDLDQDQRR
Ga0207693_107408651	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	AKLRSWRVIIMRSRGEYLGSVEAPDRERAEDVAIKLFELDDDQRRRLLIRLR
Ga0207663_105326572	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PANLRSWRVIIMRSKGEYLGSVEAPDRERAEAVAIKQFELDDDQRRRLLIRLR
Ga0207700_100473871	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VQSRCPKKKKPAAANLRRWRVIIIRSEGEYLGSVEAPDRERAEAVTTKLFDLDQDQRSRLLIRERL
Ga0207664_103018272	3300025929	Agricultural Soil	TNPKKPASLRSWRVIIMRSRGEYLGSVEAPDRVRAEAVAIKLFELDQDQRRRRLIREQV
Ga0207664_109068372	3300025929	Agricultural Soil	PTMLTTVSRRTNPKKPANLRSWRVIIRRSRGEYLGSVEAPDRQRAEAVAIKQFELDDDQRRRLLIRERL
Ga0307282_100433822	3300028784	Soil	MKTARKKPTAAKLRSWRVIVMRSRGEYLGSVEAPDREKAESVAIKLFALDDDQRSRLLILERL
Ga0307282_101609801	3300028784	Soil	MAARKKPAAAKLRSWRVIIMRSRGEYLGSVEAPDRERAEAVAIKQFALDDDQRRRLLIREMH
Ga0307282_102542111	3300028784	Soil	MLRPAVTSPRKTARNKPTAANLRSWRVIILRSRGEYLGSVEAPDRERAEAVAIKQFDLDLEQRRRLLIREVT
Ga0307282_104507642	3300028784	Soil	MSTRLNPKKPAKLRSWRVIIMRSRGEYLGSIEAPDRQTAEAAAIKLFDLDQDQRSRLLIRERV
Ga0307299_101585252	3300028793	Soil	VRRPKKKTATKLRSWRVVTMRSRGELLGYVEALDRERAEAVAIKQFDLDQDQRRRPLIRERQG
Ga0307296_107229951	3300028819	Soil	MKTARKKPTAAKLRSWRVIVMRSRGEYLGSVEAPDREKAESVAIKLFALDDYQRS
Ga0307312_107417191	3300028828	Soil	CRTSPIMAARKKPAAAKLRSWRVIIMRSRGEYLGSVEAPDRERAEAVAIKQFALDDDQRRRLLIRERD
Ga0307312_109662223	3300028828	Soil	PAKLRSWRVIIMRSRGEYLGSIEAPDRQTAEAAAIKLFDLDQDQRSRLLIRERV
Ga0307289_102689241	3300028875	Soil	MAARKKPAAAKLRSWRVIIMRSRGEYLGSVEAPDRERAEAVAIKQFALDDDQRRRLLIRERV
Ga0307289_102995901	3300028875	Soil	MRTARRKPTAAKLRSWRVIIMRSRGELLGYVEALDRERAEGEAIKLFDLDQDQRGRLLILERA
Ga0308202_11007701	3300030902	Soil	MKTARKKPTAAKLRSWRVIIMRSRGELLGYVEALDRERAEGEAIKLFDLDQDQRGRLLILERA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061330

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences