Metagenome / Metatranscriptome Family F061595

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061595
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	88 residues
Representative Sequence	MLMHVDRDLELDFIREFAVGGELLKGSSADDRRERIRVAIYGRNLLHEPFRDSGMDYGQAYQRCYGRPIEMRRTVRHEPKSEQE
Number of Associated Samples	79
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.04 %
% of genes near scaffold ends (potentially truncated)	22.90 %
% of genes from short scaffolds (< 2000 bps)	65.65 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.229 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.954 % of family members)
Environment Ontology (ENVO)	Unclassified (33.588 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.382 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.04% β-sheet: 3.57% Coil/Unstructured: 63.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00581	Rhodanese	9.92
PF00355	Rieske	9.92
PF07238	PilZ	9.16
PF00563	EAL	2.29
PF05988	DUF899	2.29
PF00926	DHBP_synthase	2.29
PF03050	DDE_Tnp_IS66	1.53
PF13177	DNA_pol3_delta2	1.53
PF13714	PEP_mutase	1.53
PF03372	Exo_endo_phos	1.53
PF00248	Aldo_ket_red	1.53
PF07995	GSDH	1.53
PF00990	GGDEF	1.53
PF00072	Response_reg	0.76
PF01063	Aminotran_4	0.76
PF13561	adh_short_C2	0.76
PF00499	Oxidored_q3	0.76
PF02737	3HCDH_N	0.76
PF08281	Sigma70_r4_2	0.76
PF00903	Glyoxalase	0.76
PF01042	Ribonuc_L-PSP	0.76
PF02618	YceG	0.76
PF00135	COesterase	0.76
PF07715	Plug	0.76
PF00211	Guanylate_cyc	0.76
PF03176	MMPL	0.76
PF01694	Rhomboid	0.76
PF04328	Sel_put	0.76
PF00725	3HCDH	0.76
PF00885	DMRL_synthase	0.76
PF09115	DNApol3-delta_C	0.76
PF02776	TPP_enzyme_N	0.76
PF01904	DUF72	0.76
PF06745	ATPase	0.76
PF00593	TonB_dep_Rec	0.76
PF01053	Cys_Met_Meta_PP	0.76
PF07690	MFS_1	0.76
PF07963	N_methyl	0.76
PF02894	GFO_IDH_MocA_C	0.76
PF02769	AIRS_C	0.76
PF13185	GAF_2	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0108	3,4-dihydroxy-2-butanone 4-phosphate synthase	Coenzyme transport and metabolism [H]	2.29
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	2.29
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	2.29
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	2.29
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	2.29
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	2.29
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.53
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	1.53
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	1.53
COG3436	Transposase	Mobilome: prophages, transposons [X]	1.53
COG0054	6,7-dimethyl-8-ribityllumazine synthase (Riboflavin synthase beta chain)	Coenzyme transport and metabolism [H]	0.76
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.76
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.76
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.76
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.76
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.76
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.76
COG0470	DNA polymerase III, delta prime subunit	Replication, recombination and repair [L]	0.76
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.76
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.76
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.76
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG0839	NADH:ubiquinone oxidoreductase subunit 6 (chain J)	Energy production and conversion [C]	0.76
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.76
COG1559	Endolytic transglycosylase MltG, terminates peptidoglycan polymerization	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.76
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.76
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.76
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.76
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.76
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.76
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.76
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.76
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.76
COG2812	DNA polymerase III, gamma/tau subunits	Replication, recombination and repair [L]	0.76
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.76
COG2879	Uncharacterized short protein YbdD, DUF466 family	Function unknown [S]	0.76
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.23 %
Unclassified	root	N/A	29.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.23 %
Unclassified	root	N/A	29.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.23 %
Unclassified	root	N/A	29.77 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	60.31 %
Unclassified	root	N/A	29.77 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	29.77 %
Unclassified	root	N/A	29.77 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	10.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.34 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	7.63 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	6.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.34 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.53 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.53 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.63 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	6.11 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.29 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.53 %
Puniceicoccales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales	0.76 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.63 %
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	4.58 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.29 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.53 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.53 %
Puniceicoccaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae	0.76 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.63 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	4.58 %
Bradyrhizobium neotropicale	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium neotropicale	2.29 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.53 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.53 %
Pelagicoccus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Pelagicoccus	0.76 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.63 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	4.58 %
Bradyrhizobium neotropicale	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium neotropicale	2.29 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.53 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.53 %
Pelagicoccus mobilis	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Pelagicoccus → Pelagicoccus mobilis	0.76 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001546\|JGI12659J15293_10096389	Not Available	644	Open in IMG/M
3300001593\|JGI12635J15846_10221034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1236	Open in IMG/M
3300001593\|JGI12635J15846_10618444	Not Available	629	Open in IMG/M
3300002245\|JGIcombinedJ26739_100242789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1690	Open in IMG/M
3300002245\|JGIcombinedJ26739_100405401	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300004099\|Ga0058900_1389453	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300004104\|Ga0058891_1469753	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005537\|Ga0070730_10000001	All Organisms → cellular organisms → Bacteria → Proteobacteria	613115	Open in IMG/M
3300005944\|Ga0066788_10167118	Not Available	564	Open in IMG/M
3300005993\|Ga0080027_10378063	Not Available	569	Open in IMG/M
3300005994\|Ga0066789_10400803	Not Available	573	Open in IMG/M
3300006893\|Ga0073928_10010331	All Organisms → cellular organisms → Bacteria → Proteobacteria	11145	Open in IMG/M
3300006893\|Ga0073928_10253235	Not Available	1345	Open in IMG/M
3300007819\|Ga0104322_133517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1707	Open in IMG/M
3300007819\|Ga0104322_138569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2102	Open in IMG/M
3300009090\|Ga0099827_11704931	Not Available	549	Open in IMG/M
3300009633\|Ga0116129_1013475	All Organisms → cellular organisms → Bacteria → Proteobacteria	3059	Open in IMG/M
3300009661\|Ga0105858_1264053	Not Available	528	Open in IMG/M
3300010865\|Ga0126346_1018222	Not Available	917	Open in IMG/M
3300010877\|Ga0126356_10729827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	913	Open in IMG/M
3300011120\|Ga0150983_10872539	Not Available	588	Open in IMG/M
3300011120\|Ga0150983_11851987	Not Available	627	Open in IMG/M
3300011120\|Ga0150983_12249763	Not Available	592	Open in IMG/M
3300011120\|Ga0150983_13100986	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300011120\|Ga0150983_13643245	Not Available	815	Open in IMG/M
3300011120\|Ga0150983_14260046	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300011120\|Ga0150983_16298160	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300011271\|Ga0137393_10000646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	21140	Open in IMG/M
3300011271\|Ga0137393_11349117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	602	Open in IMG/M
3300012096\|Ga0137389_10336889	Not Available	1282	Open in IMG/M
3300012202\|Ga0137363_10034636	All Organisms → cellular organisms → Bacteria → Proteobacteria	3516	Open in IMG/M
3300012205\|Ga0137362_10976965	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300012361\|Ga0137360_10033082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3595	Open in IMG/M
3300012924\|Ga0137413_10000153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	19089	Open in IMG/M
3300012924\|Ga0137413_10069476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2105	Open in IMG/M
3300012924\|Ga0137413_10265672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1184	Open in IMG/M
3300012929\|Ga0137404_10153273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1919	Open in IMG/M
3300014501\|Ga0182024_10003524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	37108	Open in IMG/M
3300014501\|Ga0182024_10055377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6213	Open in IMG/M
3300014501\|Ga0182024_12665876	Not Available	535	Open in IMG/M
3300015160\|Ga0167642_1007096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2021	Open in IMG/M
3300015206\|Ga0167644_1000003	All Organisms → cellular organisms → Bacteria → Proteobacteria	252093	Open in IMG/M
3300015206\|Ga0167644_1001301	All Organisms → cellular organisms → Bacteria → Proteobacteria	18315	Open in IMG/M
3300015206\|Ga0167644_1001954	Not Available	13546	Open in IMG/M
3300019882\|Ga0193713_1001774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7119	Open in IMG/M
3300019886\|Ga0193727_1009056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3898	Open in IMG/M
3300019886\|Ga0193727_1041037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1534	Open in IMG/M
3300019887\|Ga0193729_1000960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	14951	Open in IMG/M
3300019890\|Ga0193728_1218210	Not Available	788	Open in IMG/M
3300019999\|Ga0193718_1027787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1257	Open in IMG/M
3300020021\|Ga0193726_1000547	All Organisms → cellular organisms → Bacteria → Proteobacteria	38836	Open in IMG/M
3300020021\|Ga0193726_1000787	All Organisms → cellular organisms → Bacteria → Proteobacteria	29266	Open in IMG/M
3300020021\|Ga0193726_1000935	All Organisms → cellular organisms → Bacteria	26135	Open in IMG/M
3300020021\|Ga0193726_1001924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	14989	Open in IMG/M
3300020021\|Ga0193726_1065733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1696	Open in IMG/M
3300020021\|Ga0193726_1109180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1245	Open in IMG/M
3300020021\|Ga0193726_1112949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1219	Open in IMG/M
3300020021\|Ga0193726_1201176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	837	Open in IMG/M
3300020021\|Ga0193726_1274864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	668	Open in IMG/M
3300020034\|Ga0193753_10132885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1204	Open in IMG/M
3300020034\|Ga0193753_10195924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	930	Open in IMG/M
3300020060\|Ga0193717_1015154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3486	Open in IMG/M
3300020140\|Ga0179590_1212384	Not Available	530	Open in IMG/M
3300020199\|Ga0179592_10000014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	83911	Open in IMG/M
3300020579\|Ga0210407_10000710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	35529	Open in IMG/M
3300020579\|Ga0210407_10003252	All Organisms → cellular organisms → Bacteria → Proteobacteria	13306	Open in IMG/M
3300020579\|Ga0210407_10156683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1757	Open in IMG/M
3300020579\|Ga0210407_10381898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1102	Open in IMG/M
3300020579\|Ga0210407_10894052	Not Available	681	Open in IMG/M
3300020580\|Ga0210403_10138948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1983	Open in IMG/M
3300020580\|Ga0210403_10903223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	696	Open in IMG/M
3300020581\|Ga0210399_10565908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium neotropicale	942	Open in IMG/M
3300021168\|Ga0210406_10006494	All Organisms → cellular organisms → Bacteria → Proteobacteria	12114	Open in IMG/M
3300021168\|Ga0210406_10010857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	8932	Open in IMG/M
3300021168\|Ga0210406_10775974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	731	Open in IMG/M
3300021170\|Ga0210400_10118310	All Organisms → cellular organisms → Bacteria	2112	Open in IMG/M
3300021170\|Ga0210400_11076466	Not Available	651	Open in IMG/M
3300021178\|Ga0210408_10016894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5887	Open in IMG/M
3300021363\|Ga0193699_10008143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3757	Open in IMG/M
3300021401\|Ga0210393_10008819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7904	Open in IMG/M
3300021401\|Ga0210393_10043491	All Organisms → cellular organisms → Bacteria → Proteobacteria	3528	Open in IMG/M
3300021401\|Ga0210393_10242874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1460	Open in IMG/M
3300021401\|Ga0210393_11055023	Not Available	657	Open in IMG/M
3300021420\|Ga0210394_10097466	All Organisms → cellular organisms → Bacteria → Proteobacteria	2544	Open in IMG/M
3300021433\|Ga0210391_10786519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	744	Open in IMG/M
3300021433\|Ga0210391_11073826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	626	Open in IMG/M
3300021475\|Ga0210392_10484646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	909	Open in IMG/M
3300021477\|Ga0210398_10151553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1887	Open in IMG/M
3300021478\|Ga0210402_10202092	All Organisms → cellular organisms → Bacteria → Proteobacteria	1826	Open in IMG/M
3300021478\|Ga0210402_11159186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium neotropicale	700	Open in IMG/M
3300021479\|Ga0210410_10000202	All Organisms → cellular organisms → Bacteria → Proteobacteria	84028	Open in IMG/M
3300021479\|Ga0210410_10020371	All Organisms → cellular organisms → Bacteria → Proteobacteria	5730	Open in IMG/M
3300021479\|Ga0210410_10125149	All Organisms → cellular organisms → Bacteria	2280	Open in IMG/M
3300021968\|Ga0193698_1054846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	508	Open in IMG/M
3300022533\|Ga0242662_10334774	Not Available	513	Open in IMG/M
3300022557\|Ga0212123_10012056	All Organisms → cellular organisms → Bacteria → Proteobacteria	11693	Open in IMG/M
3300022557\|Ga0212123_10270326	Not Available	1207	Open in IMG/M
3300023255\|Ga0224547_1000078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	20353	Open in IMG/M
3300024222\|Ga0247691_1006183	All Organisms → cellular organisms → Bacteria	2055	Open in IMG/M
3300024288\|Ga0179589_10021127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2153	Open in IMG/M
3300024330\|Ga0137417_1009847	Not Available	995	Open in IMG/M
3300026374\|Ga0257146_1062953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	601	Open in IMG/M
3300026482\|Ga0257172_1050975	Not Available	758	Open in IMG/M
3300026490\|Ga0257153_1094050	Not Available	597	Open in IMG/M
3300026551\|Ga0209648_10652115	Not Available	576	Open in IMG/M
3300027575\|Ga0209525_1017744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1738	Open in IMG/M
3300027629\|Ga0209422_1125011	Not Available	587	Open in IMG/M
3300027684\|Ga0209626_1008259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2358	Open in IMG/M
3300027857\|Ga0209166_10000003	All Organisms → cellular organisms → Bacteria → Proteobacteria	613129	Open in IMG/M
3300027895\|Ga0209624_10004915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9072	Open in IMG/M
3300030803\|Ga0074037_1297903	Not Available	520	Open in IMG/M
3300030880\|Ga0265776_113178	Not Available	511	Open in IMG/M
3300031057\|Ga0170834_104391224	Not Available	749	Open in IMG/M
3300031057\|Ga0170834_111360085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	662	Open in IMG/M
3300031057\|Ga0170834_113909574	Not Available	524	Open in IMG/M
3300031128\|Ga0170823_14242855	Not Available	591	Open in IMG/M
3300031231\|Ga0170824_103164583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1162	Open in IMG/M
3300031231\|Ga0170824_108106094	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Pelagicoccus → Pelagicoccus mobilis	965	Open in IMG/M
3300031231\|Ga0170824_110394940	Not Available	574	Open in IMG/M
3300031231\|Ga0170824_123536597	Not Available	512	Open in IMG/M
3300031446\|Ga0170820_15718718	Not Available	552	Open in IMG/M
3300031474\|Ga0170818_107836989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1001	Open in IMG/M
3300031718\|Ga0307474_10188284	All Organisms → cellular organisms → Bacteria	1568	Open in IMG/M
3300031754\|Ga0307475_10845452	Not Available	725	Open in IMG/M
3300031823\|Ga0307478_10022022	All Organisms → cellular organisms → Bacteria → Proteobacteria	4512	Open in IMG/M
3300032174\|Ga0307470_10174720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1343	Open in IMG/M
3300032174\|Ga0307470_10255791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1160	Open in IMG/M
3300032756\|Ga0315742_10350944	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300032756\|Ga0315742_11796336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium neotropicale	673	Open in IMG/M
3300032756\|Ga0315742_12261175	Not Available	614	Open in IMG/M
3300032756\|Ga0315742_12655500	Not Available	574	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.18%
Aquatic	Environmental → Aquatic	3.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.42%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.05%
Freshwater	Environmental → Aquatic → Freshwater	0.76%
Peat	Environmental → Terrestrial → Peat	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.34%
Loam	Environmental → Terrestrial → Soil → Loam	13.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.34%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.05%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.34%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.05%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	10.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.82%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.05%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	3.05%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.29%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.53%
Permafrost Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.53%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.53%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.76%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.76%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007819	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 Soapdenovo	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015160	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7C, Adjacent to main proglacial river, mid transect (Watson river))	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023255	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300030803	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral C3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030880	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12659J15293_100963892	3300001546	Forest Soil	MLARMQQLTHLDRDIELEFIREFSVNGEFLKGSNADDRRERIRIAIWTNKLERSPFRDSGMNYGQAYQRCYGRPIEMRATVRSEARLS*
JGI12635J15846_102210341	3300001593	Forest Soil	MQPLMHLDRDLELEFIREFSVHGELLKGASADDRRERIRIAIYVHNLVHQPFRDSGMDYAAAYEQCYRRPIEMRRTVRHEPKPAG*
JGI12635J15846_106184441	3300001593	Forest Soil	MHLDRELELDFIREFAVGAELLRTSNVDDRRERIRVAIYRHNLLHAPFRDSGMDYAQAYESCYGRPIEMRRTVRHETKSVTQSN*
JGIcombinedJ26739_1002427893	3300002245	Forest Soil	MQPLMHLDRDLELEFIREFSVHGELLKGASADDRRERIRIAIYVHNLVHQPFRDSGMDYAAAYXQCYRRPIEMRRTVRHEPKPAG*
JGIcombinedJ26739_1004054012	3300002245	Forest Soil	MLMHVDRDLELDFIREFAVGGDLLKSSSVDDRRERIRVAIYGRNLLHEPFRNSGMDYGQAYHRCYGRHIEMRRTVRHEPKSESLIAAESRQK*
Ga0058900_13894532	3300004099	Forest Soil	DFIREFAVGGELLKGSSVDDRRERIRVAIYGNKRIDEPFRDSGMNYGQAYQRCYGRPIEMRRTVRHEPKSEP*
Ga0058891_14697531	3300004104	Forest Soil	HLDRDIELEFIREFSVNGEFLKGTNVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYERCYGRPIEMRATVRPAVQAS*
Ga0070730_10000001411	3300005537	Surface Soil	MSTSHRQTSCPTIAYSAVMQRVTHPDPDLELEFIREFSVRGEQLMAAATDDRRERIRIAIYVQNLVHQPFRDTGMDYAAAYHKCYGRPIEMRRTVRPQLKPRADTASEH*
Ga0066788_101671181	3300005944	Soil	MHLDRDLELDFIREFAVGGELLKCSSVDDRRERIRVAIYTRQLLHKRFRDSGMDYGQAYERCYGRPIEMRRTERQEPASHLRHRSGQ*
Ga0080027_103780631	3300005993	Prmafrost Soil	MHFDQDIELDFIREFSVHGDVLRSANVDDRRERIRIAIYTHNLAHKPFRDSGMDYATAYQRCYHRPLELRCKVKARTEAKKG*
Ga0066789_104008032	3300005994	Soil	VAGLRATGRHMPMHPDRDLELDFIREFAVGGVLLKGSNVDDRRERIRVAIYSRNLLPEPFRDSGMDYRQAYERCYGRPIEMRRTVRHEPKQ*
Ga0073928_100103318	3300006893	Iron-Sulfur Acid Spring	MLMHVDRDLELDFIREFAVGGELLKGSSVDDRRERIRVAIYAQNLLHAPFRDSGLDYGQAYQRCYGRPIEMRRTVRHEPKLEPLIAEP*
Ga0073928_102532352	3300006893	Iron-Sulfur Acid Spring	MFMHDRELELDFIREFAVGGALLKGSSVDDRRERIRLAIYGSNLLREPFRDSGMSYEQAYHRCYGRPVEMRRTVRHEPKSAPLIAGESLS*
Ga0104322_1335172	3300007819	Permafrost Soil	MEQLTHLDRDLELEFIREFSVHGELLKGASVDDRRERIRIAIYVHNLLRQPFRDTGMDYAAAYEKCYRRPIEMRRTVRHEPKQRRSESL*
Ga0104322_1385693	3300007819	Permafrost Soil	MQQLMHLDRDLELEFIREFSVHGELLKGASADDRRERIRIAIYVHNLVHQPFRDSGMDYAAAYQQCYRRPIEMRRTVRHEPKLRADNSP*
Ga0099827_117049312	3300009090	Vadose Zone Soil	MLMRGDRDLELDFIREFAVGGDLKDSRSDDRRERIRLAIYGRNLLHEPFRDSGLDYGQAYQRCYGRPIEMRRTVKARTEV*
Ga0116129_10134754	3300009633	Peatland	MQQLMHLDRDLELEFIREFSVHGELLKGAQPDDRRERIRIAIYVHNLLHQPFRDSGMDYAAAYQKCYRRPIELRRSVRHEPKPQADESFDDEEGRQ*
Ga0105858_12640531	3300009661	Permafrost Soil	MRRGHATLRQMQQLTQLDQDIELDFIREFSVRGEFLSVSSVDDRRERIRVAIWANKLERSPFRDSGMDYGQAYLRCYGRPIEMRHTVREEPRAS*
Ga0126346_10182221	3300010865	Boreal Forest Soil	MQPADQLLGANHMLMHVDRDLELDFIREFAVGGDLLNSSSVDDRRERIRVAIYGRNLLHAPFRNSGMDYGQAYHRCYGRHIEMRRTVRHEPKSESLIAAESGQK*
Ga0126356_107298273	3300010877	Boreal Forest Soil	MRAARRTLRRMQQLTHLDRDIELEFIREFSVNGEFLNSSNVDDRRERIRVAIWANKLERSPFRDSGMNYGQAYQSCYGRPIEMRATVRPVVRVS*
Ga0150983_108725392	3300011120	Forest Soil	MQRPTHPDPDLELEFIREFSVRGEQLMAATPDDRRERIRIAIYVQNLVHQPFRDTGMDYAAAYHKCYGRPIEMRRTVRPQPKSRTDAASG*
Ga0150983_118519872	3300011120	Forest Soil	MPLTRIDRDLELDFIREFAVGGELLKCSSDDRRERIRVAIYRRNLLHEPFRDSGMDYGLAYQRCYGRPIEMRRTVRDGPSKSP*
Ga0150983_122497631	3300011120	Forest Soil	YGSGVLQSVLQVHMLMHLDRELELDFIREFAVGAELLKTSNVDDRRERIRVAIYRHNLLHAPFRDSGMDYAQAYESCYGRPIEMRRTVRHETKSVT*
Ga0150983_131009862	3300011120	Forest Soil	SLDREIELDFIREFAMGGELLRGSNVDERRERIRVAIYGNNLVHAPFRDSGMDYAQAYESCYGRPIEMRRTARHEPKLADYHDN*
Ga0150983_136432452	3300011120	Forest Soil	RATGSRMLMHVDRDLELDFIREFAVGGELLKCSNVDDRRERIRVAIYSRNLLHSPFRESGMDYRQAYERCYGRPIEMRRTVRHEPRR*
Ga0150983_142600463	3300011120	Forest Soil	QADAHHVRAAASVRALADRQIRTVRRTLRRMQPLTHLDRDIELEFIREFSVNGEFLKGTNVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYERCYGRPIEMRATVRPAVQAS*
Ga0150983_162981601	3300011120	Forest Soil	YASAGHMLMHVDRDLELDFIREFAVGGELLKGSSVDDRRERIRVAIYGNKRIDEPFRDSGMNYGQAYQRCYGRPIEMRRTVRHEPKSEP*
Ga0137393_1000064611	3300011271	Vadose Zone Soil	MPLTHIDRDLELDFIREFAVGGETLKCSSDDRRERIRVAIYRCNLLHEPFRDSGMDYGLAYQRCYGRPIEMRRTVRHGPKSEPLIAAESLQK*
Ga0137393_113491172	3300011271	Vadose Zone Soil	MRPGRGMLRGMQPLTHLDRDIELEFIREFSVNGKLLKGTNVDDRRERIRVAIWTNKLERSPFRDSGMNYGQAYQRCYGRPIEMRATVRPEALVS*
Ga0137389_103368892	3300012096	Vadose Zone Soil	MLMRGDRDLELDFIREFAVGGETLKCSSDDRRERIRVAIYRCNLLHEPFRDSGMDYGLAYQRCYGRPIEMRRTVRHGPKSEPLIAAESLQK*
Ga0137363_100346367	3300012202	Vadose Zone Soil	MLMRGDRDLELDFIREFAVGGDLKDSRSDDRRERIRLAIYGRNLLHEPFRDSGLDYGQAYQRCYGRPIEMRRTVKARTEA*
Ga0137362_109769653	3300012205	Vadose Zone Soil	RALADRQVRPGRGMLRGMQPLTHLDRDIELEFIREFSVNGELLKGTNVDDRRERIRVAIWTNKLERSPFRDSGMNYGQAYQRCYGRPIEMRASVRPEALVS*
Ga0137360_100330821	3300012361	Vadose Zone Soil	REFAVGGETLKCSSDDRRERIRVAIYRCNLLHEPFRDSGMDYGLAYQRCYGRPIEMRRTVRHGPKSEPLIAAESLQK*
Ga0137413_100001538	3300012924	Vadose Zone Soil	MRPLTHLDRDIELEFIREFSVNGRFLGTNVDDRRERIRIAIWANKLERSPFRDSGMNYGQAYQRCYGKPIEMRANGRTEAQAS*
Ga0137413_100694762	3300012924	Vadose Zone Soil	MRPGRRILRRMQPLTHLDRDIELEFIREFSVNGELLKGTNVDDRRERIRTAIWTNKLERSPFRDSGMNYGQAYECCYGRPIEMRATVRPAARVS*
Ga0137413_102656723	3300012924	Vadose Zone Soil	MRPGRGMLRGMQPLTHLDRDIELEFIREFSVNGELLKGTNVDDRRERIRVAIWTNKLERSPFRDSGMNYGQAYQRCYGRPIEMRA
Ga0137404_101532733	3300012929	Vadose Zone Soil	MRPGRRILRRMQPLTHLDRDIELEFIREFSVNGELLKGTNVDDRRERIRTAIWTNKLERSPFRDSGMNYGQAYQRCYGRPIEMRASVRPEALVS*
Ga0182024_1000352430	3300014501	Permafrost	MQPLTHLDRDIELEFIREFSVNGEFLKGSNTDERRERIRIAIWTNKLERAPFRDSGMNYGQAYQRCYGRPIEMRATVRGEARLS*
Ga0182024_100553775	3300014501	Permafrost	MLMRGDRDLELDFIREFAVGGDLKDSRADDRRERTRLAIYGRNLLHEPFRDSGMDYGQAYQRCYGRPIEMRRTVRHEPKSEPLIAAVRRGQSADV*
Ga0182024_126658761	3300014501	Permafrost	NHMLMHVDRDLELDFIREFAAGGELMTGLSADDRRERIRLAIYGRNLLHEPFRDSGMDYGQAYQRCYGRPIEMRRTVRREPKSEPLIAAESLQK*
Ga0167642_10070962	3300015160	Glacier Forefield Soil	MQQLTHLDRDIELEFIREFSVNGEFLKGSNVDERRERIRIAIWANKLERSPFRDSGMNYGQAYQRCYGRPIEMRATVRTEARAS*
Ga0167644_100000391	3300015206	Glacier Forefield Soil	MQPLMHLDRDLELEFIREFSVHGELLKGAKPDDRRERIRIAIYVHNLLHQPFRDSGMDYAAAYQKCYRRPIELRRTVRHEPKPQADAASDDEEDRR*
Ga0167644_100130113	3300015206	Glacier Forefield Soil	MHLDPDFELEFIREFSVHGKLLKGASADDRRERIRIAIYVHNLVHQPFRDSGMDYAAAYQKCYRRPIEMRRTVRHEPKPQADNTP*
Ga0167644_10019549	3300015206	Glacier Forefield Soil	MQQLTHLDRDIELEFIREFSVNGEFLKGSNVDDRRERIRIAIWANKLERSPFRDSGMNYGQAYQRCYGRPIEMRATVRTEARAS*
Ga0193713_10017746	3300019882	Soil	MLRRMQPLTHLDRDIELEFIREFSVNGEFFKGTNVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYQCCYGRPIEMRATVRPVARVS
Ga0193727_10090562	3300019886	Soil	MQPLTHLDRDIELEFIREFSVNGEFLNSSNVDDRRERIRVAIWANKLERSPFRDSGMNYGQAYQSCYGRPIEMRATVRPVAQAS
Ga0193727_10410372	3300019886	Soil	MLRRMQPLTHLDRDIELEFIREFSVNGEFLKGTNVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYQCCYGRPIEMRATVRPVARVS
Ga0193729_10009609	3300019887	Soil	MLRRMQPLTHLDRDIELEFIREFSVNGEFLKGTNVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYQCCYGRPIEMRATVRPVTQVS
Ga0193728_12182101	3300019890	Soil	MLMHVDRDLELDFIREFAVGGELLKGSSADDRRERIRVAIYGRNLLHEPFRDSGMDYGQAYQRCYGRPIEMRRTVRHEPKSEQE
Ga0193718_10277873	3300019999	Soil	MRPGRRMLRRMQPLTHLDRDIELEFIREFSVNGEFLKGTNVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYQCCYGRPIEMRATVRPVTQVS
Ga0193726_100054716	3300020021	Soil	MLWRMQQLTHLDRDIELEFIREFSVNGEFLQGSNVDERRERIRIAIWTNKLERAPFRDSGMNYAQAYEACYGRPIEMRGTVRR
Ga0193726_10007879	3300020021	Soil	MLTHYDRELELDFIREFAVGGELINGSSADKRRERIRVAIYGSKLLREPFRDTGMDYAPAYQRCYGRPIEMRRTARDELKSEQDDGV
Ga0193726_100093523	3300020021	Soil	MLMDNLELDFIREFAVGGELFKGSNADDRRERIRVAIYSSNLLHQPFRDSGMDYGQAYQRCYGRPIEMRRTVRCKPKSEQGNRV
Ga0193726_100192419	3300020021	Soil	VSALADRQMRTARCTLRRMQPLTHLDRDIELEFIREFSVNGEFLNSSNVDDRRERIRVAIWANKLERSPFRDSGMNYGQAYQSCYGRPIEMRATVRPVAQAS
Ga0193726_10657333	3300020021	Soil	LADRQMRTGRRTLRRMQPLTHLDRDIELEFIREFSVNGEFLKGSNVDDRRERIRVAIWANKLERSPFRDSGMNYGQAYQRCYGRPIEMRATVRTEAGPS
Ga0193726_11091802	3300020021	Soil	MQFDRDLDQEFIREFAVGGDLLNGSFVDRRERIRVAIYRSNLLHVPFRDSGMDYGQAYEFCYRRPIEMRSTVREEMPKKIA
Ga0193726_11129492	3300020021	Soil	MQPITHPDRDIELEFIREFSVNGALLNGSNADDRRELIRIAIWANKLERSPFRDSGMTYGQAYQRCYGRPIEMRCTVRAEARVS
Ga0193726_12011763	3300020021	Soil	MRAGRRTLRRMQPLTHLDRDIELEFIREFSVNGEFLKGWNADDRRERIRIAIWANKLERSPFRDSGMNYGQAYEQCYGRPIEMRAA
Ga0193726_12748642	3300020021	Soil	MLRRMQPLTHLDRDIELEFIREFSVNGEFLKGANVDDRRERIRIAIWTNKLERSPFRDSGMSYGQAYQSCYGRPIEMRATVRPPTQSS
Ga0193753_101328853	3300020034	Soil	MRLGRRILRCMQPLTHLDRDIELEFIREFSVNGEFLKGTNVDDRRERIRVAIWANKLERSPFRDSGMNYGQAYQSCYGRPIEMRATVRPAAQAS
Ga0193753_101959243	3300020034	Soil	LADRQMRTARCTLRRMQPLTHLDRDIELEFIREFSVNGEFLNSSNVDDRRERIRVAIWANKLERSPFRDSGMNYGQAYQSCYGRPIEM
Ga0193717_10151544	3300020060	Soil	MQRAADSVRALADRQMRAGRRMLQRMQPLTHLDRDIEMEFIREFSVNGEFLKGANVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYQSCYGRPIEMRATVRPATQAS
Ga0179590_12123841	3300020140	Vadose Zone Soil	MLMRGDRDLELDFIREFAVGGDLKDSRANDRRERIRLAIYGRNLLHEPFRDSGMDYGQAYQRCYGRPIEMRRTVKLAAEFDAETR
Ga0179592_1000001436	3300020199	Vadose Zone Soil	MRPGRGMLRGMQPLTHLDRDIELEFIREFSVNGELLKGTNVDDRRERIRVAIWTNKLERSPFRDSGMNYGQAYQRCYGRPIEMRATVRPEALVS
Ga0210407_1000071033	3300020579	Soil	MQPLTHLDRDIELEFIREFSVNGEFLKGTNVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYERCYGRPIEMRATVRPAVQAS
Ga0210407_100032527	3300020579	Soil	MLMHLDRELELDFIREFAVGAELLKTSNVDDRRERIRVAIYRHNLLHAPFRDSGMDYAQAYESCYGRPIEMRRTVRHETKSVT
Ga0210407_101566833	3300020579	Soil	MRAARCTLRRMQPLTHLDRDIELEFIREFSVNGEFLTGSNVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYQRCYGRPIE
Ga0210407_103818982	3300020579	Soil	MQPLMHLDRDLELEFIREFSVHGELLKGASADDRRERIRIAIYVHNLVHQPFRDSGMDYAAAYEQCYRRPIEMRRTVRHEPKPQVDDSP
Ga0210407_108940521	3300020579	Soil	MLMRIDRDLELDFIREFAVGGELLQCSSDDRRELIRVAIYRRNLLHEPFRDSGMDYGLAYQCCYGRPIEMRRTVRHET
Ga0210403_101389483	3300020580	Soil	MQPLMHLDRDLELEFIREFSVHGELLKGASADDRRERIRIAIYVHNLVHQPFRDSGMDYAAAYQQCYRRPIEMRRTVRHEPKPQEFGG
Ga0210403_109032231	3300020580	Soil	MLMSLDRELELDFIREFAVGGELPRSKNVDERREHIRVAIYGHNLVHAPFRDSGMDYAQAYECCYGRPIEMRRTARH
Ga0210399_105659082	3300020581	Soil	MLMNVDRELELDFIREFAVGGELLKGSSVDDRRERIRVAIYGSNRLHEPFRDTGLDYGQAYHRCYGRPIEMRRTVRHEPKPQPQTEEPLQE
Ga0210406_100064949	3300021168	Soil	MADSCTSNVVMSLDREMELDFIREFAVGGELLRGSNVDERRERIRVAIYGNNLVHAPFRDSGMDYAQAYESCYGRPIEMRRTPRHEPKLADYHDN
Ga0210406_100108577	3300021168	Soil	MQPLMHLDRDLELEFIREFSVHGELLKGASADDRRERIRIAIYVHNLVHQPFRDSGMDYAAAYQQCYQRPIEMRRTVRHEPKPQEFGG
Ga0210406_107759742	3300021168	Soil	MQPLTHLDRDIELEFIREFSVNGEFLTGSNVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYQRCYGRPIEMRATVRIEARLS
Ga0210400_101183101	3300021170	Soil	RELELDFIREFAVGGELPRGKNVDERREHIRVAIYGHNLVHAPFRDSGMDYAQAYECCYGRPIEMRRTARHETKLATISTIEDAGSD
Ga0210400_110764662	3300021170	Soil	MLMRIDRDLELDFIREFAVGGELLQCSSDDRRELIRVAIYRRNLLHEPFRDSGMDYGQAYQRCYGRPIEMRRTVR
Ga0210408_100168946	3300021178	Soil	MLMNVDRELELDFIREFAVGGDLIKGASADDRRERIRVAIYGKKRLHEPFRDTGMDYGQAYQCCYGRPIEMRRTVRHEPKPEPVTTE
Ga0193699_100081434	3300021363	Soil	MLRRMQPLTHLDRDIELEFIREFSVNGEFLKGTNVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYQCCYGRPIEMRATVRPAAQAS
Ga0210393_100088195	3300021401	Soil	MRAARCTLRRMQPLTHLDRDIELEFIREFSVNGEFLTGSNVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYQRCYGRPIEMRATVRIEARLS
Ga0210393_100434912	3300021401	Soil	MQPLMHLDRDLELEFIREFSVHGELLKGAKPDDRRERIRIAIYVHNLLHQPFRDSGMDYAAAYQKCYRRPIEMRRTVRHEPTPQADDEEEHR
Ga0210393_102428743	3300021401	Soil	LADRQVRCGRPMLARMHQLTHLDRDIELEFIREFSVNGEFLKGSNTDDRRERIRIAIWTNKLERAPFRDSGMNYGQAYQRCYGRPIEMRATVRSEVRLS
Ga0210393_110550231	3300021401	Soil	MLMHVDRDLELDFIREFAVGGELLKGSSVDDRRERIRVAIYGNKRIDEPFRDSGMNYGQAYQRCYGRPIEMRRTVRHEPKSEP
Ga0210394_100974662	3300021420	Soil	MLTQIDRELELDFIREFAVGGELLKGSSADDRRERIRVAIYGKKRLHEPFRDSGMDYGEAYQRCYGRPIEMRRTVRHEPPVTEAESEQK
Ga0210391_107865192	3300021433	Soil	MQPLMHLDRDLELEFIREFSVHGELLKGAKPDDRRERIRIAIYVHNLLHQPFRDSGMDYAAAYQKCYRRPIEMRRTVRHEPTPQADD
Ga0210391_110738262	3300021433	Soil	MQPLMHLDRDLELEFIREFSVHGELLKGASADDRRERIRIAIYVHNLVHQPFRDSGMDYAAAYEQCYRRPIEMRRTVRHEP
Ga0210392_104846462	3300021475	Soil	MQPLMHLDRDLELEFIREFSVHGELLKGASADDRRERIRIAIYVHNLVHQPFRDSGMDYAAAYEQCYRRPIEMRRTVRHE
Ga0210398_101515532	3300021477	Soil	MQPLMHLDRDLELEFIREFSVHGELLKGASADDRRERIRIAIYVHNLVHQPFRDSGMDYAAAYEQCYRRPIEMRRTVRHEPKPQADDSP
Ga0210402_102020922	3300021478	Soil	MLMHVDRDLELDFIREFAVGGELLKCSNVDDRRERIRVAIYSRNLLHSPFRESGMDYRQAYERCYGRPIEMRRTVRHEPRQ
Ga0210402_111591861	3300021478	Soil	MLMNVDRELELDFIREFAVGGDLIKGASTDDRRERIRVAIYGKKRLHEPFRDTGMDYGQAYQRCYGRPIEMRRTVRHEPKPEPVTTEEPLQ
Ga0210410_100002022	3300021479	Soil	MNVDRELELDFIREFAVGGDLIKGASADDRRERIRVAIYCKKRLHEPFRDTGMDYGQAYQCCYGRPIEMRRTVRHEPKPEPVTTE
Ga0210410_100203715	3300021479	Soil	MPMQPLMHLDRDLELEFIREFSVHGELLKGASADDRRERIRIAIYVHNLVHQPFRDSGMDYAAAYEQCYRRPIEMRRTVRHEPKPQADDSP
Ga0210410_101251491	3300021479	Soil	DRDLELDFIREFAVGGELLKCSSDDRRERIRVAIYRRNLLHEPFRDSGMDYGLAYQRCYGRPIEMRRTVRDGPSKSP
Ga0193698_10548462	3300021968	Soil	MLRRMQPLTHLDRDIELEFIREFSVNGEFLKGTNVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYQCCYGRPIEMRATVRPVARV
Ga0242662_103347741	3300022533	Soil	MADSCTSNVVMSLDREMELDFIREFAVGGDLIKGASTDDRRERIRVAIYGKKRLHEPFRDTGMDYGQAYQRCYGRPIEMRRTVRHEPKSEPVTTEEPLQ
Ga0212123_100120565	3300022557	Iron-Sulfur Acid Spring	MLMHVDRDLELDFIREFAVGGELLKGSSVDDRRERIRVAIYAQNLLHAPFRDSGLDYGQAYQRCYGRPIEMRRTVRHEPKLEPLIAEP
Ga0212123_102703263	3300022557	Iron-Sulfur Acid Spring	MFMHDRELELDFIREFAVGGALLKGSSVDDRRERIRLAIYGSNLLREPFRDSGMSYEQAYHRCYGRPVEMRRTVRHEPKSAPLIAGESLS
Ga0224547_10000789	3300023255	Soil	MQPLTHLDRDIELEFIREFSVNGEFLKGSNTDERRERIRIAIWTNKLERAPFRDSGMNYGQAYQRCYGRPIEMRATVRGEARLS
Ga0247691_10061831	3300024222	Soil	MLRRMQPLTHLDRDIELEFIREFSVNGEFLKGTSVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYQSCYGRPLEMRATVRPAAQMS
Ga0179589_100211271	3300024288	Vadose Zone Soil	VPPAAMPLTHIDRDLELDFIREFAVGGETLKCSSDDRRERIRVAIYRCNLLHEPFRDSGMDYGLAYQRCYGRPIEMRRTVRHGPKSEPLIAAESLQK
Ga0137417_10098473	3300024330	Vadose Zone Soil	MPLTHIDRDLELDFIREFAVGGETLKCSSDDRRERIRVAIYRCNLLHEPFRDSGMDYGLAYQRCYGRPIEMRRTVRHGPKSEPLIAAESLQK
Ga0257146_10629531	3300026374	Soil	MQPLPHLDRDIELEFIREFSVNGEFLNRSSVDDRRERIRVAIWTNKLERSPFRDSGMNYGQAYLSCYGRPIEMRATVRTAVHAS
Ga0257172_10509751	3300026482	Soil	MPLTRIDRDLELDFIREFAVGGELLKCSSDDRRERIRVAIYRHNLLHEPFRDSGMDYGLAYQRCYGRPIEMRRTVRHGPKSEPLIAAESLQK
Ga0257153_10940501	3300026490	Soil	MLMSLDRELELDFIREFAVGGELPRGKNVDERRERIRVAIYGHNLVHAPFRDSGMDYAQAYECCYGRPIEMRRTARHEPRKLGDAGSD
Ga0209648_106521151	3300026551	Grasslands Soil	MRHVYEQQGANHMLKHVDRDLELDFIREFAVGGNLFKRSSVDDRRERIRVAIYGRNLLHQPFRDSGMDYGQAYHRCYGRPIEMRRTVRHEPKSEPLVAAESLQK
Ga0209525_10177442	3300027575	Forest Soil	MLMHVDRDLELDFIREFAVGGDLLKSSSVDDRRERIRVAIYGRNLLHEPFRNSGMDYGQAYHRCYGRHIEMRRTVRHEPKSESLIAAESRQK
Ga0209422_11250111	3300027629	Forest Soil	MLMHLDRELELDFIREFAVGAELLRTSNVDDRRERIRVAIYRHNLLHAPFRDSGMDYAQAYESCYGRPIEMRRTVRHETKSVTQSN
Ga0209626_10082593	3300027684	Forest Soil	MLARMQPLTHLDRDIELEFIREFSVNGEFLKGSNVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYQRCYGRPIEMRATVRIEARLS
Ga0209166_10000003403	3300027857	Surface Soil	MSTSHRQTSCPTIAYSAVMQRVTHPDPDLELEFIREFSVRGEQLMAAATDDRRERIRIAIYVQNLVHQPFRDTGMDYAAAYHKCYGRPIEMRRTVRPQLKPRADTASEH
Ga0209624_100049154	3300027895	Forest Soil	MLARMQQLTHLDRDIELEFIREFSVNGEFLKGSNADDRRERIRIAIWTNKLERSPFRDSGMNYGQAYQRCYGRPIEMRATVRSEARLS
Ga0074037_12979032	3300030803	Soil	MLMHLDRELELDFIREFAVGAELLRTSNVDDRRQRIRVAIYRHNLLHAPFRDSGMDYAQAYESCYGRPIEMRRTVRHETKSVT
Ga0265776_1131781	3300030880	Soil	LTHLDRDIELEFIREFSVNGEFLKGSNTDDRRERIRIAIWTNKLERAPFRDSGMNYGQAYQRCYGRPIEMRATVRSEVRLS
Ga0170834_1043912242	3300031057	Forest Soil	MLMRGDRDLELDFIREFAVGGDLKDSRANDRRERIRLAIYGRNLLHEPFRDSGMDYGQAYQRCYGRPIEMRRTVKLAAEIDAETR
Ga0170834_1113600851	3300031057	Forest Soil	MLTSLDRDLELDFIREFAVGGELPRGKNVDERRERIRVAIYGRNLVHAPFRDSGMDYAQAYECCYGRPIEMRRTARHEPRKLGDAGSD
Ga0170834_1139095741	3300031057	Forest Soil	LDFIREFAVGGELSKGSNVDDRRERIRLAIYGSNLLRKPFRDSGMNYGQAYQRCYGMPIEMRRAVRHRPETKQGDGK
Ga0170823_142428552	3300031128	Forest Soil	MLMRGDRDLELDFIREFAVGGDLKDSRANDRRERIRLAIYGRNLLHEPFRDSGMDYGQAYQRCYGRPIEMRRTVKAGTEV
Ga0170824_1031645833	3300031231	Forest Soil	MLMHLDPDLELDFIREFAVGGELSKGSNVDDRRERIRLAIYGSNLLREPFRDSGMNYGQAYQRCYGMPIEMRRAVRHRPETKQGDGK
Ga0170824_1081060941	3300031231	Forest Soil	MLTSLDRDLELDFIREFAVGGELPRGKNVDERREHIRVAIYGRNLVHAPFRDSGMDYAQAYECCYGRPIEMRRTARHEPRKLGDAGSD
Ga0170824_1103949402	3300031231	Forest Soil	MLMHIDRDLELDFIREFAVGGDLKGSSADDRRERIRVAIYGRNLLHEPFRKSGMDYGQAYHRCYGRHIEMRRTVRHEPKSESLIAAESSQK
Ga0170824_1235365971	3300031231	Forest Soil	LDFIREFAVGGETLKCSSDDRRERIRVAIYRCNLLHEPFRDSGVDYALTYQRCYGRPIEMRRTVRHGPKSEPLIAAESLQK
Ga0170820_157187182	3300031446	Forest Soil	MLMHLDPDLELDFIREFAVGGELSRGSNVDDRRERIRLAIYGSNLLREPFRDSGMNYGQAYQRCYGMPIEMRRAVRHKPETKEGDGK
Ga0170818_1078369893	3300031474	Forest Soil	MLMHLDPDLELDFIREFAVGGELSRGSNVDDRRERIRLAIYGSNLLREPFRDSGMNYGQAYQRCYGMPIEMRRAVRHRPETKQGDGK
Ga0307474_101882841	3300031718	Hardwood Forest Soil	APVGALADRQMRAARCTLRRMQPLTHLDRDIELEFIREFSVNGEFLTGSNVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYQRCYGRPIEMRATVRIEARLS
Ga0307475_108454521	3300031754	Hardwood Forest Soil	MPLTYIDRDLELDFIREFAVGGELLKGSSDDRRERIRVAIYRRNLLREPFRDSGMDYGQAYQRCYGRPIEMRRTVRHEPKSGSLIAAESLQK
Ga0307478_100220223	3300031823	Hardwood Forest Soil	MQQLVDLDRDLELEFIREFSVHGELLRGASSDDRRERIRIAIYVHNLVHKPFRDSGMDYAAAYQMCYRRPLEMRRTVRHEPKPPRNDCV
Ga0307470_101747201	3300032174	Hardwood Forest Soil	MRPCRRMLRRMQPLTHLDRDIELEFIREFSVNGEFLKGTSVDDRRERIRIAIWTNKLERSPFRDSGMNYGQAYQCCYGRSLEMRATVRPPAQVS
Ga0307470_102557912	3300032174	Hardwood Forest Soil	MLMHIDRDLELDFIREFAVGGDLKGSSADDRRERIRVAIYGRNLLHEPFRNSGMDYGQAYHRCYGRHIEMRRTVRHEPKSECLIAAESSQK
Ga0315742_103509441	3300032756	Forest Soil	LTHLDRDIELEFIREFAVNGEFLKGSNADDRRERIRIAIWANKLERSPFRDSGMNYGQAYQRCYGRPIEMRATVRSVAPLS
Ga0315742_117963362	3300032756	Forest Soil	CYASAGHMLMNVDRELELDFIREFAVGGELLKGASVDDRRERIRVAIYGKKRLHEPFRDSGMDYGQAYHRCYGRPIEMRRTVRHEPKLENLNSEEPLHE
Ga0315742_122611752	3300032756	Forest Soil	MLMHLDRELELDFIREFAVGAELLTTSNVDDRRERIRVAIYRHNLLHAPFRDSGMDYAQAYESCYGRPIEMRRTVRHETKSVT
Ga0315742_126555002	3300032756	Forest Soil	MLARMHQLTHLDRDIELEFIREFSVNGEFLKGSNTDDRRERIRIAIWTNKLERAPFRDSGMNYGQAYQRCYGRPIEMRATVRSEVRLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061595

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences