Metagenome Family F061614

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061614
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	67 residues
Representative Sequence	MTILDRLHAPRPAGLSAMLLVLLLIAPVTLAHASPPDQTWLAGVYDQADFDDVVGLLTSALE
Number of Associated Samples	55
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.77 %
% of genes near scaffold ends (potentially truncated)	91.60 %
% of genes from short scaffolds (< 2000 bps)	81.68 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.733 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (51.908 % of family members)
Environment Ontology (ENVO)	Unclassified (74.809 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (80.916 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 47.78% β-sheet: 0.00% Coil/Unstructured: 52.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF01321	Creatinase_N	5.34
PF04392	ABC_sub_bind	3.05
PF02265	S1-P1_nuclease	3.05
PF07075	DUF1343	2.29
PF01243	Putative_PNPOx	1.53
PF13354	Beta-lactamase2	1.53
PF02518	HATPase_c	1.53
PF14366	DUF4410	0.76
PF08028	Acyl-CoA_dh_2	0.76
PF00899	ThiF	0.76
PF00872	Transposase_mut	0.76
PF02806	Alpha-amylase_C	0.76
PF00589	Phage_integrase	0.76
PF11356	T2SSC	0.76
PF16542	PNKP_ligase	0.76
PF01695	IstB_IS21	0.76
PF12773	DZR	0.76
PF02417	Chromate_transp	0.76
PF07589	PEP-CTERM	0.76
PF13560	HTH_31	0.76
PF00691	OmpA	0.76
PF13683	rve_3	0.76
PF06662	C5-epim_C	0.76
PF13365	Trypsin_2	0.76
PF14378	PAP2_3	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	5.34
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.05
COG3876	Exo-beta-N-acetylmuramidase YbbC/NamZ, DUF1343 family	Cell wall/membrane/envelope biogenesis [M]	2.29
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.76
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.76
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.76
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.76
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.76
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.76
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.73 %
Unclassified	root	N/A	15.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.73 %
Unclassified	root	N/A	15.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.73 %
Unclassified	root	N/A	15.27 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	18.32 %
Unclassified	root	N/A	15.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	18.32 %
Unclassified	root	N/A	15.27 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.29 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.53 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.76 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	18.32 %
Unclassified	root	N/A	15.27 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.29 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.53 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.27 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	8.40 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.53 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.53 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.27 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7.63 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.53 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.53 %
Candidatus Rokubacteria bacterium GWC2_70_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium GWC2_70_16	0.76 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.76 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.27 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7.63 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	1.53 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.53 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.76 %
Candidatus Rokubacteria bacterium GWC2_70_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium GWC2_70_16	0.76 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.27 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7.63 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	1.53 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.53 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.76 %
Candidatus Rokubacteria bacterium GWC2_70_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium GWC2_70_16	0.76 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.27 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	7.63 %
Stigmatella aurantiaca	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	1.53 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.53 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.76 %
Candidatus Rokubacteria bacterium GWC2_70_16	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium GWC2_70_16	0.76 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004268\|Ga0066398_10143854	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	593	Open in IMG/M
3300004268\|Ga0066398_10176784	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	551	Open in IMG/M
3300004268\|Ga0066398_10203024	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	524	Open in IMG/M
3300004633\|Ga0066395_10108176	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1351	Open in IMG/M
3300004633\|Ga0066395_10428261	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300005332\|Ga0066388_100629739	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300005332\|Ga0066388_100799197	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300005332\|Ga0066388_101513349	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1175	Open in IMG/M
3300005332\|Ga0066388_102411873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	954	Open in IMG/M
3300005332\|Ga0066388_102789739	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300005332\|Ga0066388_102857411	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	882	Open in IMG/M
3300005332\|Ga0066388_103811387	Not Available	769	Open in IMG/M
3300005332\|Ga0066388_105747913	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005713\|Ga0066905_101083589	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005713\|Ga0066905_101357782	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	642	Open in IMG/M
3300005713\|Ga0066905_101452895	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300005764\|Ga0066903_102577322	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300005764\|Ga0066903_104426563	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	750	Open in IMG/M
3300005764\|Ga0066903_104729273	Not Available	724	Open in IMG/M
3300005764\|Ga0066903_107248279	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300006852\|Ga0075433_10678208	Not Available	903	Open in IMG/M
3300006904\|Ga0075424_100205464	All Organisms → cellular organisms → Bacteria	2092	Open in IMG/M
3300007076\|Ga0075435_101134637	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300009162\|Ga0075423_12899981	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300009792\|Ga0126374_10695973	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300009792\|Ga0126374_11818736	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300010043\|Ga0126380_10024410	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	2963	Open in IMG/M
3300010046\|Ga0126384_10847483	Not Available	822	Open in IMG/M
3300010046\|Ga0126384_11090630	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	731	Open in IMG/M
3300010046\|Ga0126384_11752249	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300010047\|Ga0126382_10086010	Not Available	1983	Open in IMG/M
3300010047\|Ga0126382_11140026	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300010047\|Ga0126382_12423423	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300010048\|Ga0126373_12100926	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300010358\|Ga0126370_10531060	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300010358\|Ga0126370_11226965	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300010358\|Ga0126370_12204424	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300010358\|Ga0126370_12671651	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	500	Open in IMG/M
3300010359\|Ga0126376_10011357	Not Available	5562	Open in IMG/M
3300010359\|Ga0126376_10414538	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300010359\|Ga0126376_11589345	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300010360\|Ga0126372_10021964	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3790	Open in IMG/M
3300010360\|Ga0126372_10144084	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300010360\|Ga0126372_10163547	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1800	Open in IMG/M
3300010360\|Ga0126372_10460061	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1182	Open in IMG/M
3300010360\|Ga0126372_10466486	Not Available	1175	Open in IMG/M
3300010360\|Ga0126372_10767678	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300010360\|Ga0126372_12486594	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300010361\|Ga0126378_10471466	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1370	Open in IMG/M
3300010361\|Ga0126378_11207749	Not Available	854	Open in IMG/M
3300010361\|Ga0126378_11870869	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300010361\|Ga0126378_13171203	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300010362\|Ga0126377_10099345	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	2652	Open in IMG/M
3300010362\|Ga0126377_10723877	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300010366\|Ga0126379_10409743	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300010366\|Ga0126379_10529314	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300010366\|Ga0126379_13136101	Not Available	553	Open in IMG/M
3300010366\|Ga0126379_13141256	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300010376\|Ga0126381_100443239	Not Available	1819	Open in IMG/M
3300010376\|Ga0126381_102567175	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	729	Open in IMG/M
3300010376\|Ga0126381_103175612	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300010376\|Ga0126381_103185459	Not Available	649	Open in IMG/M
3300010376\|Ga0126381_103591546	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300010398\|Ga0126383_10281431	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium GWC2_70_16	1651	Open in IMG/M
3300010398\|Ga0126383_11058306	Not Available	900	Open in IMG/M
3300010398\|Ga0126383_12673861	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300010398\|Ga0126383_12992945	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300010863\|Ga0124850_1124474	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300012948\|Ga0126375_10259569	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300012948\|Ga0126375_11718589	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300012948\|Ga0126375_11739814	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	542	Open in IMG/M
3300012948\|Ga0126375_12094742	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	502	Open in IMG/M
3300012971\|Ga0126369_10100447	All Organisms → cellular organisms → Bacteria → Proteobacteria	2618	Open in IMG/M
3300012971\|Ga0126369_10207057	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300012971\|Ga0126369_10303485	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1599	Open in IMG/M
3300012971\|Ga0126369_10321247	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1558	Open in IMG/M
3300012971\|Ga0126369_10945439	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300012971\|Ga0126369_11638959	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300012971\|Ga0126369_11685282	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300012971\|Ga0126369_12219076	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	636	Open in IMG/M
3300012971\|Ga0126369_13278474	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300012971\|Ga0126369_13469507	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300016270\|Ga0182036_10541597	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300016319\|Ga0182033_10713732	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	879	Open in IMG/M
3300016357\|Ga0182032_10150121	All Organisms → cellular organisms → Bacteria	1723	Open in IMG/M
3300016387\|Ga0182040_10063509	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2359	Open in IMG/M
3300016387\|Ga0182040_11361080	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300016422\|Ga0182039_11924807	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300016445\|Ga0182038_10117300	All Organisms → cellular organisms → Bacteria	1970	Open in IMG/M
3300021560\|Ga0126371_10209265	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300021560\|Ga0126371_11088712	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300021560\|Ga0126371_11549972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300021560\|Ga0126371_11988685	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300021560\|Ga0126371_12297115	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	651	Open in IMG/M
3300021560\|Ga0126371_13038421	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300027527\|Ga0209684_1000710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	6111	Open in IMG/M
3300027527\|Ga0209684_1054827	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300027527\|Ga0209684_1067035	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300027654\|Ga0209799_1096039	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300027874\|Ga0209465_10003000	All Organisms → cellular organisms → Bacteria	7350	Open in IMG/M
3300027874\|Ga0209465_10086460	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1530	Open in IMG/M
3300027874\|Ga0209465_10460508	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300031543\|Ga0318516_10033025	All Organisms → cellular organisms → Bacteria	2742	Open in IMG/M
3300031543\|Ga0318516_10050590	All Organisms → cellular organisms → Bacteria	2260	Open in IMG/M
3300031543\|Ga0318516_10346573	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300031543\|Ga0318516_10624781	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300031668\|Ga0318542_10644571	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300031680\|Ga0318574_10772165	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300031681\|Ga0318572_10590091	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300031719\|Ga0306917_10836617	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300031744\|Ga0306918_10259746	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300031747\|Ga0318502_10231682	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300031751\|Ga0318494_10555250	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300031771\|Ga0318546_10014594	All Organisms → cellular organisms → Bacteria	4312	Open in IMG/M
3300031771\|Ga0318546_10086998	All Organisms → cellular organisms → Bacteria	2028	Open in IMG/M
3300031781\|Ga0318547_10190168	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300031846\|Ga0318512_10171964	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300031893\|Ga0318536_10240519	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300031946\|Ga0310910_10488664	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300031947\|Ga0310909_10075104	All Organisms → cellular organisms → Bacteria	2666	Open in IMG/M
3300032044\|Ga0318558_10105277	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300032089\|Ga0318525_10014035	All Organisms → cellular organisms → Bacteria	3689	Open in IMG/M
3300032205\|Ga0307472_100555281	Not Available	1003	Open in IMG/M
3300033289\|Ga0310914_10047369	All Organisms → cellular organisms → Bacteria	3530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.18%
Host-Associated	Host-Associated	3.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.18%
Plants	Host-Associated → Plants	3.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.05%
Loam	Environmental → Terrestrial → Soil → Loam	22.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	22.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	51.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	22.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.05%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066396_100016431	3300004267	Tropical Forest Soil	MTILDRLQASRPAGLSVMLLAFLLVAPVTLAHASLSDQTWLEGVYDQADFDDVVGLLTSS
Ga0066398_101438542	3300004268	Tropical Forest Soil	MTILDRLHAPRPGGMGAMLLALLIIAPVTLAHASPPDQTWIPGVYDQADLDDVVGILSSTLEATDSTPAPEVGPCLALAPK
Ga0066398_101767841	3300004268	Tropical Forest Soil	MMTILDRRHAPRPAGLSVLLALLLIAPVTLAHASPPDQTWLAGVYDQADFDDVVGLLTSALEATDSTVAPAAG
Ga0066398_102030241	3300004268	Tropical Forest Soil	MTILDRLHTPRPDSLNLLLALLLITPVTLTHASRPDQTWLAGVYDQADFDDVVGLLTSALEA
Ga0066395_101081761	3300004633	Tropical Forest Soil	MTILDRAHAPRPDGLSVMLLVLLIIAPVTLAHASPPDQTWLAGVYDQADFDDVVALLTSALEATGFAGAPEAGR*
Ga0066395_104282612	3300004633	Tropical Forest Soil	MTLLDRLRAPRPDGLSAMLLVLLIIAPITLAYASPPDPTWLAGVYDQADFDDVV
Ga0066388_1006297393	3300005332	Tropical Forest Soil	MTILDRLHAPRRDGLNALLLALLIIAPVTLAHASPPDEVWLAGVYDQADFDDVVYFLTSTL*
Ga0066388_1007991973	3300005332	Tropical Forest Soil	MTILGRLYAPRPNGLSAMLLALLIIAPVTLAHASPPDQTWLPGVYDQGDFDDVVA
Ga0066388_1015133493	3300005332	Tropical Forest Soil	MTILDRLHVPRSAGLSAMLLVLLMIAPVTLAHASPPDQTWLAGVYDQADFDDV
Ga0066388_1024118732	3300005332	Tropical Forest Soil	MTILDRLHAPRPGGMGAMLLALLIIAPVTLSHASPPDQTWIPGVYDQADLDDVVGLLSSTLEATDSTPAPEVGPCLALAPKRYPATV
Ga0066388_1027897392	3300005332	Tropical Forest Soil	MTILDRLRAPRLPRVSVTLLALLLIVPVTLAHASPPDQTWLAGVYDQADFDDVVGLLTSSLDA
Ga0066388_1028574111	3300005332	Tropical Forest Soil	MTVLDPLHVPRPNGLGAMLLALLIIAPVTLAHASPPDQTWLPGVYDQGDFDDVVA
Ga0066388_1038113872	3300005332	Tropical Forest Soil	MSHVDRLHAPRPGGLCAMLLLAVLIIAPVTLAHASPPDQTWLAGVYDQADFDDVVGLLT
Ga0066388_1057479131	3300005332	Tropical Forest Soil	MTILDRLYAPRPDGLSAMLLVLLIIIPVTLAHASPPDQTWLAGVYDQADFDDVVGLLTSALEATDSIVTPEA
Ga0066905_1010835892	3300005713	Tropical Forest Soil	MTILDPFHTPRLRGLSITLLALLIIAPVTLAHASPPDQTWIAGIYDQADFDDVVGFLTSALEATDSTVAP
Ga0066905_1013577821	3300005713	Tropical Forest Soil	MTILDRLHAPRPGGMGAMLLALLIIAPVTLAHASPPDQTWIAGVYDQADFDDVVGLLTSALEATESTVAPQAGPCLALAPKLCLA
Ga0066905_1014528951	3300005713	Tropical Forest Soil	MTILDRSHAPRPAGLSAMLLALLISAPVTLAHASPPDQTWLAGVYDQADFDDVVGLLT
Ga0066903_1025773221	3300005764	Tropical Forest Soil	MTILNRLHVPRIDRLSAMLLVLLLIAPVTLAHASPPDPTWLAGVYDQADFDDVVCLLTSVLEAT
Ga0066903_1044265632	3300005764	Tropical Forest Soil	MTILDRLHAPRLPGLSITLLTLLIIVPITLAHASPPDQTWFAGVYDQADFDDVVG
Ga0066903_1047292731	3300005764	Tropical Forest Soil	MTILDCLHAPRLDGLGATLLALLIVAPVTLAHASPSDQTWLAGVYDQADFDDVVGLLTSALDATD
Ga0066903_1072482791	3300005764	Tropical Forest Soil	MTILDRLQVPRPARLSVLLILLLIAPVTLAHASPPDQTWLAGVYDQADFDDVVG
Ga0075433_106782082	3300006852	Populus Rhizosphere	MTILDRWHVPRLPRLSVTLLTLLVIVPVTLAHASPPDQTWLAGVYDQADFDDVVG
Ga0075424_1002054644	3300006904	Populus Rhizosphere	MTILDRLHTPRPGGLSAMLLALLIIAPVTLAHAAPPDQTWLAGVYDQADFDDVVGLLTSTLDATDSTAAPEAGACFALAPKLFPAQWRARLLRT*
Ga0075435_1011346371	3300007076	Populus Rhizosphere	MTILDRLHTPRPGGLSAMLLALLIIAPVTLAHASPPDQTWLAGVYDQADFDDVVGLLTST
Ga0075423_128999811	3300009162	Populus Rhizosphere	MVIFGRWHGSRPVRLGAMLLVLLVIVPVMLAHASPPDQTWIAGIYDQADFDDVIGLLTSVLEGTHCIAA
Ga0126374_106959732	3300009792	Tropical Forest Soil	MTILDRLHAPRPDGLSAMLLVLLIIAPVTLAHASPPDQTWLAGVYDQADFDDV
Ga0126374_118187362	3300009792	Tropical Forest Soil	MTILDRWHVPHLPRLSVTLLTLLVIVPVTLAHASPPDQTWLAGVYDQADFDDVVGLLTSVLD
Ga0126380_100244101	3300010043	Tropical Forest Soil	MAILDRLHVPRIDRLSAMWLVLLLIAPVTLAHASPPDPTWLAGVYDQADFDD
Ga0126384_108474831	3300010046	Tropical Forest Soil	MTILDRLHVPRPDGLGAMLLALLIVAPVTLAHASPPDQTWLPSVYDQGDLDDVVALLTSALGATDSSTAPEAGVCFA
Ga0126384_110906302	3300010046	Tropical Forest Soil	MPILDRLQVPRLPCLSITLVALLTIVPVTLAHASPPDQTWLAGIYDQADFDDVVGLLTSALDATDST
Ga0126384_117522492	3300010046	Tropical Forest Soil	VARARPKLIGPDEARMTILDRLHAPRPDSLSAMLLVLLMIAPVTLAHASPPDPTWIVGVYDQADFDDVVCLLTSVLEATDSTVA
Ga0126382_100860102	3300010047	Tropical Forest Soil	MTILDRVHVPRPDGLSAMLLVLLIIAPVTLAHASPPDLTWLAGVYDQADFDDVVDLLTSICEASGSATAPEADPWLALAPKLC
Ga0126382_111400262	3300010047	Tropical Forest Soil	MTILDRRHAPRLLRVSVTLLALLVIVPVTLAHASPPDQTWLAGVYDQADFDDVVGLLTSTLD
Ga0126382_124234231	3300010047	Tropical Forest Soil	MTILDRLHPPRPAGLSTMLLVLLIIAPVTLAHASPPDQTWIAGVYDQADFDDVVGLLTSVLEATDSTVAPEPRHCFA
Ga0126373_121009262	3300010048	Tropical Forest Soil	MTILDRLHAPRPAGLSATLLAFLIIAPVTLAHASPPDQTWISGFYDQADFDDAVGLLTSALEATDSIGVP
Ga0126373_132541711	3300010048	Tropical Forest Soil	MTILDRLHAPRSGRLGAMLLALLIIAPVTLAHASPPDQTWIAGVYDQADFD
Ga0126370_105310601	3300010358	Tropical Forest Soil	MTILDRLRAPRFPRLSVTLLTLLVIVPVTLAHASPPDQTWLAGVYDQADFDDVVGLLTSALDA
Ga0126370_112269651	3300010358	Tropical Forest Soil	MTILDRLHAPRPNSFSAMLSVLLIVTPVTLAQASPPDQTWLAGIYDQADFDDVVGF
Ga0126370_122044241	3300010358	Tropical Forest Soil	MTILDRLHVPRTDGLSALLLVLLMIAPVTLAHASPPDPTWFAGVYDQADFDDVVCLLTSALEATDST
Ga0126370_126716511	3300010358	Tropical Forest Soil	MTILDRLRVPRFPRLSVTLLALLLVVPVTLAHASPPDQTWLAGVYDQADFDDVVGL
Ga0126376_100113571	3300010359	Tropical Forest Soil	MTILDRWHVPRFPRLSVTLMTLLVIVPVTLAHASPPDQTWLAGVYDQADFDDVVGLLT
Ga0126376_104145383	3300010359	Tropical Forest Soil	MTILNRLHVPRIDRLSAMWLVLLLIAPVTLAHASPPDPTWLAGVYDQADFDDVVCLLTSVLEA
Ga0126376_115893452	3300010359	Tropical Forest Soil	MTILDRVHAPRPDGLSAMLLVLLIITPVTLAHASPPDQTWLAGVYDQADFDDVVALL
Ga0126372_100219641	3300010360	Tropical Forest Soil	MVTILDRRHAPRPSGLSVLLTLLIIAPVTLAHASPPDQTWLPGVYDQADFDDVVALLTSALGATD
Ga0126372_101440844	3300010360	Tropical Forest Soil	MTILDRAHASRFSGWSAALLALLIIVPVTLAHASLPDQTWPAGVYDQADFDDVVGLLTSALDATDS
Ga0126372_101635471	3300010360	Tropical Forest Soil	MTILDRLQAPRPGSLSAMLLALLIIAPVTLAHASPPDQTWLAGVYDQGDFDDVVCLLTSALEATDSTVAPEAGPCLALAPKL
Ga0126372_104600613	3300010360	Tropical Forest Soil	MTILDRLHAPRLLRLRVTLLALLVIVPVTLAHASPPDQTWLAGVYDESDFDDVVGLLTSALDATDSTAATEAGACFTLTPKLCPA
Ga0126372_104664861	3300010360	Tropical Forest Soil	MTILNRLHVPRIDRLSAMLLVLLIIAPVTLAHASPPDPTWLAGVYDQADFDDVVC
Ga0126372_107676781	3300010360	Tropical Forest Soil	MTILDRWHVPRLPRLSVTLLTLLVIVPVTLAHASPPDQTWLAGVYDQADFDDVVGLLTSALDAIDSTAAPEAGACFALAPKLS
Ga0126372_122138022	3300010360	Tropical Forest Soil	MTILDRLHAPRPGGMGAMLLALLIIAPVTLAHASPPDQTWIPGVYDQADLD
Ga0126372_124865941	3300010360	Tropical Forest Soil	MTILDRLHAPRPNGMSAMLLVLLIIAPATLAHASPPDQAWLAGAYDQADFDDVVCLLTSA
Ga0126378_104714661	3300010361	Tropical Forest Soil	MTILDRLRAPRLPRLSVTLLALLLIVPVTLAHASPPDQTWLAGVYDQADFDDVVGLLTS
Ga0126378_112077492	3300010361	Tropical Forest Soil	MTILDRRHVPRLPRLSVTLLTLLVIVPVTLAHASPPDQTWLAGVYDQADFDDVVGLL
Ga0126378_118708691	3300010361	Tropical Forest Soil	MTILDRLHAPRPVGLSATFLVLLIIALVTLAHASPPDQTWLAGVYVQADFDDVVGLLTS
Ga0126378_121226071	3300010361	Tropical Forest Soil	MTILDRLRASRPAGLSVMLAFLLIAPVTFAHASLPDQTWLGGIYDQADF
Ga0126378_131712032	3300010361	Tropical Forest Soil	MTILDRWHVPRFPRLSVTLMTLLVIVPVTLAHASPPDQTWLAGVYDQADFDDVVGLLTSALDATDSTAAPEAGACFA
Ga0126377_100993454	3300010362	Tropical Forest Soil	MTILDRLHVPRIDRLSAMWLVLLLIAPVTLAHASPPDPTWLAGVYDQADFDDVVCLLTSVLEATESTVA
Ga0126377_107238772	3300010362	Tropical Forest Soil	MTILDRWHVPRLPRLSVTLLTLLVIVPVTLAHASPPDQTWLAGVYDEADFDDVVGLLTSAFDATDSHSRVRSW
Ga0126379_104097432	3300010366	Tropical Forest Soil	MIILDRLQVSRAAGLSVMLLGFLLIVSVTLAHASLPDQTWLEGVFDQADFDDVVGLLTSLLEVTDSSAAPAAGACL
Ga0126379_105293143	3300010366	Tropical Forest Soil	MTILDRFHAPRPGGLSAMLLALLIIVPVTLAHASPPDQTWLAGVYDEADFDDVVGLL
Ga0126379_131361012	3300010366	Tropical Forest Soil	MILDRSPAPHPGGLIAVSLLLFITAPVTLAYASPPDQIWLAGVYDQADFDDVVGLLTSAL
Ga0126379_131412561	3300010366	Tropical Forest Soil	MTILGRLHVPRPAGLSAMLLVLLIIAPVTLAHASPPDQTWIAGVYDQADFDNVVGFLTSALE
Ga0126381_1004432391	3300010376	Tropical Forest Soil	MTILDRSHAPRPAGLSILLALLLIVPVTLAHASPPDQTWLAGVYDQADFDD
Ga0126381_1025671752	3300010376	Tropical Forest Soil	MTILDRLHTPRPDSLNLLLALLLITPVTLAHASPPDPTWLAGVYDQADFDDVV
Ga0126381_1031756122	3300010376	Tropical Forest Soil	MTILDRLRASRPAGLSVMLLAFLLIAPVTLAHASLPDQIWLGGIYDQADFDDVVGLLTSSLEATGIPAAAEVG
Ga0126381_1031854592	3300010376	Tropical Forest Soil	MTILDRWHAPRLLCLSVTLLTFLVIVPVTLAHATPPGQTWLASVYDQADFDDVVGLLTSALDATDSTAAPEASACFALAPKLCPLALAWS
Ga0126381_1035915461	3300010376	Tropical Forest Soil	MIILDRLYALRPDGLSATLLTILLIAPITFAYASPPDETWLAGVYDQADFDDVVCLLTSA
Ga0126383_102814311	3300010398	Tropical Forest Soil	MTILDRVHVPRTDGLSALLLVLLLIAPVTLAHASPPDPTWFAGVYDQADFDDVVCLLTSV
Ga0126383_103394991	3300010398	Tropical Forest Soil	MTILDRLQVSRAAGLSVMLLAFLLIVSVTLAHASLPDQTWLEGVFDQADFDDVVGL
Ga0126383_110583061	3300010398	Tropical Forest Soil	MTILDRLHVPRPDGLGAMLLALLIVAPVTLAHASPPDQTWLPSVYDQGDLDDVVALLTSALGATDSSTAPEAGVCFAL
Ga0126383_126738611	3300010398	Tropical Forest Soil	MTILDRVHVPRPDGLSAMLLVLLIIVPVALAHASPPDQTWIAGVYDEADFDDVVGLLTSALEAT
Ga0126383_129929451	3300010398	Tropical Forest Soil	MTILDRFHAPRPGGLSAMLLALLIIVPVTLAHASPPDQTWLAGVYDEADFDDVVGLLTSALEATEATVAPEAGPCLVLAPRPCPA
Ga0124850_11244741	3300010863	Tropical Forest Soil	MTILDRAHAPRPDGLSVMLLVLLIIAPVTLAHASPPDQTWLAGVYDQADFDDVVALLTSALEATGFAGAPEAGRCLALLPKLC
Ga0126375_102595692	3300012948	Tropical Forest Soil	MTILDRLYVPRPDRVSAMLLLLLIIAPVTLAHASPPDQTWLAGVYDQSDFDDVVGLLTSAFDAIDSTAALGAGAS
Ga0126375_117185892	3300012948	Tropical Forest Soil	MTILDRLHVPRTDGLSALLLVLLMIAPVTLAHASPPDPTWFAGVYDQADFDDVVCLLTSVLEATDSTVAPEASPCLA
Ga0126375_117398141	3300012948	Tropical Forest Soil	MTILDRVHVPRPDGLSAMLLVLLIIVPVALAHASPPDQTWIAGVYDEADFDDVVGLLTSA
Ga0126375_120947421	3300012948	Tropical Forest Soil	MTILDRLQAPRPAGMGAILLALLIIVPVTLAHATPPDQTWLAGVYDQADFDDAVCLLTSALEAPDSTVPREAGPYLALAPKLCP
Ga0126369_101004473	3300012971	Tropical Forest Soil	MTILDRLQAPRPGGLSAMLLALLIIAPVTLAHASPPDQTWLAGVYDQGDFDDVVCLLTSALEAT
Ga0126369_102070571	3300012971	Tropical Forest Soil	MTILGRLYAPRPNGLSAMLLALLIIAPVTLAHASPPDQTWLPGVYDQGDFDDV
Ga0126369_103034851	3300012971	Tropical Forest Soil	MPIPDRLQVPRLPCLSITLLALLSIVPVTLAHASPPDQTWLAGVYDQADFD
Ga0126369_103212473	3300012971	Tropical Forest Soil	MMTILDRRHVPRPAGLSVLLALLIIAPVTLAHASPPDQTWLPGVYDQADFDDVVALLTSALGATDSSTAPEAGVCFALGPK
Ga0126369_109454391	3300012971	Tropical Forest Soil	VAVARPQLIEARMTILDRLRAPRFPRLSVTLLTLLVIVPVTLAHASPPDQTWLAGVYDQADFDDVVGLLTSSLDATDSTAAPEA
Ga0126369_116389592	3300012971	Tropical Forest Soil	MTILDRLHAPRSGRLGAMLLALLIIAPVTLAHASPPDQTWIAGVYDQADFDDVVGFLTSALEATDSTVAP
Ga0126369_116852821	3300012971	Tropical Forest Soil	MILGRLHAPRPDGLSAMLLVLLMFAPVTLAHASPPDQIWLAGVYDQADFDDVVGLLTS
Ga0126369_122190762	3300012971	Tropical Forest Soil	MTILDRLHAPRPAGLSAMLLVLLLIAPVTLAHASPPDQTWLAGVYDQADFDDVVGLLTSALE
Ga0126369_132784741	3300012971	Tropical Forest Soil	MTILDRLHVRRLLRLSVTLLALLVIVPVTLAHASPPDQTWLAGVYDESDFDDVVGLLTAL
Ga0126369_134695071	3300012971	Tropical Forest Soil	MTILDRAHAPRPDGLSVMLLVLLIIAPVTLAHASPPDQTWLAGVYDQADFDDVVALLTSALEATGFAGAP
Ga0182036_105415972	3300016270	Soil	MTILDRLHAPRPDGLSAMLLALLIITAVTLAHASPPDQTWIAGVYDQADFDDVVGLLTSTLEATDSTAVPGARTSFPLAPK
Ga0182033_107137322	3300016319	Soil	MTILDRLHAPRPGGMGAMLLALLIIAPVTLADASPPDQTWIPGVYDQADLDDVV
Ga0182032_101501212	3300016357	Soil	MAILDRWHAPHPDRLSAMLLVLLMIAPVTLAHASPPDPTWVAGVYDQADFDDVV
Ga0182040_100635093	3300016387	Soil	MTILDRLHPRRPAGLSTMLLVLLIIAPVTLAHASPPDPTWLAGVYDQADFDDVVGLLTS
Ga0182040_113610801	3300016387	Soil	MTILDRLHAPRPDGLSAMLLALLIITAVTLAHASPPDQTWIAGVYDQADFDDVVGLLTSTLEA
Ga0182039_119248071	3300016422	Soil	MTILDRLYPPRPAGLSTMLLVLLIIAPVTLAHASPPDPTWLAGVYDQADFDDVVGLLTSALEA
Ga0182038_101173001	3300016445	Soil	MTILDRLHPRRPAGLSTMLLVLLIIAPVTLAHASPPDQTWIAGVYDQADFDDVVGLLTSVLEATDSTVAPEPRHCFALAPKLGQARV
Ga0126371_102092651	3300021560	Tropical Forest Soil	MIILDRLHAPRPDGVSAMLLVLLMVAPITLAHASPPDQTWLAGVYDQADFDDVVDLLTSALEATN
Ga0126371_110887122	3300021560	Tropical Forest Soil	MTLLDRLRAPRADGLSAMLLVLLVIAPITLAYASPPDPTWLAGVYDQADFDDVVDLLTSALEATNSTVAP
Ga0126371_115499722	3300021560	Tropical Forest Soil	MSNVDRLHAPRPGGSCAMLLLAVLIIAPVTLAHASPPDQTWLAGVYDQADFDDVVGLLTSAFEATDSTTAPEAGPCLALVP
Ga0126371_117878311	3300021560	Tropical Forest Soil	MTILDRLQASRPAGLSVMLLAFLLVAPVTLAHASLSDQTWLEGVYDQADF
Ga0126371_119886851	3300021560	Tropical Forest Soil	MTILDPLHVPRPDGLSAMLLVLLIIAPVTLAHASPPDPAWLAGVYDQADFDDVVDLLTSALEATNS
Ga0126371_122971151	3300021560	Tropical Forest Soil	MTILDRLHAPRPDGISAMLLVLLLIAPVTLAHASPPDPTWLAGVYDQADFDDVVCLLT
Ga0126371_130384211	3300021560	Tropical Forest Soil	MTILDRSHAPRLRGLSVTLLALLAIIAVTLAHASPPDQTWIPGVYDQANFDDVVGLLTSAFEATDSTTAPEAG
Ga0209684_10007101	3300027527	Tropical Forest Soil	MTILDRWHVPRFPRLSVTLMTLLVIVPVTLAHASPPDQTWLAGVYDQADFDDVVGLLTSALDAT
Ga0209684_10548271	3300027527	Tropical Forest Soil	MTILDRLHPPRPAGLSTMLLVLLIIAPVTLAHASPPDQTWIAGVYDQADFDDVVGFLTSALEATDSTVAPEPGPRL
Ga0209684_10670352	3300027527	Tropical Forest Soil	MTILDRWHVPHLPRLSVTLLTLLVIVPVTLAHASPPDQTWLAGVYDQADFDDVVGLLTSVLDATDSTA
Ga0209799_10960392	3300027654	Tropical Forest Soil	MTILDRLHPPRPDGLSAMLLALLIITPVTLAHASPPDQTWTPGVYDQADFDDVVGLLTSTLE
Ga0209465_100030001	3300027874	Tropical Forest Soil	MTILDRLHVPRLLRLSVTLLALLVIVPVTLAHASPPDQTWLAGVYDESDFDDVVGLLTSALDATDSTAATEA
Ga0209465_100864603	3300027874	Tropical Forest Soil	MTILDRAHAPRPDGLSVMLLVLLIIAPVTLAHASPPDQTWLAGVYDQADFDDVVALLTSALEATGFAGAPEAGR
Ga0209465_104605081	3300027874	Tropical Forest Soil	MSNVDRLHAPRPGGLCAMLLAVLIIAPVTLAHASPPDQTWIAGVYDQADFDDVVGLLTSVLEATDSTVAPEPG
Ga0268264_124795831	3300028381	Switchgrass Rhizosphere	MVHLSGLSSMLLALLLIAPVTLAHASLPDQTWLEGVYDEADFDDVVGLLTSALEVTDSTAAPESGPCLAFEPK
Ga0318516_100330255	3300031543	Soil	MTILDRLHAPRPGGMGAMLLALLIIAPVTLADASPPDQTWIPGVYDQADLDDVVGLLSSTLEAPDSTPAPEVGPCLALA
Ga0318516_100505902	3300031543	Soil	MTVLDRLHVPRPAGLSAMLLVLLMIAPVTLAHASPPDPTWLAGVYDQADFDDVVGLLTSALEASGSATAPDAGPCLA
Ga0318516_103465731	3300031543	Soil	MSTLDRLHAPRPAGLSAMLLVLLIIAPVTLAHASPPDQTWLAGVYDQADFDDVVGFLTSALEATDPTPAPEARSCLALAPRLC
Ga0318516_106247811	3300031543	Soil	MIILDRLYAPRPDGLSAMLLTLLLIAPITLAHASPPDQTWLAGVYDQAAFDEVVCLLTSALQVIESTAASED
Ga0318542_106445711	3300031668	Soil	MAILDRWHAPHPDRLSAMLLVLLMIAPVTLAHASPPDPTWVAGVYDQADFDDVVCLLTSALE
Ga0318574_107721651	3300031680	Soil	MTILDRLHAPRPDGLSAMLLALLIITAVTLAHASPPDQTWIAGVYDQADFDDVVGLLTSTLEATDSTAVPGAGTSFALA
Ga0318572_105900912	3300031681	Soil	MTVLDRLHVPRPAGLSAMLLVLLMIAPVTLAHASPPDPTWLAGVYDQADFDDVVGLLTSALEA
Ga0306917_108366171	3300031719	Soil	MTVLDRLHVPRPAGLSAMLLVLLMIAPVTLAHASPPDPTWLAGVYDQADFDDVVGLLTSALEASGSATAPDAGPCLALAP
Ga0306918_102597461	3300031744	Soil	MTILDRLHPRRPAGLSTMLLVLLIIAPVTLAHASPPDQTWIAGVYDQADFDDVVGFLTSALEATDSTVAPEPGPRLA
Ga0318502_102316821	3300031747	Soil	MAILDRWHAPHPDRLSAMLLVLLMIAPVTLAHASPPDPTWVAGVYDQADFDDVVCLLTSALEATESTAAPEPRHC
Ga0318494_105552501	3300031751	Soil	MAILDRWHAPHPDRLSAMLLVLLMIAPVTLAHASPPDPTWVAGVYDQADFDDVVCLLTSALEATESTAAPEPRHCLALAPK
Ga0318546_100145944	3300031771	Soil	MTVLDRLHVPRPAGLSAMLLVLLMIAPVTLAHASPPDPTWLAGVYDQADFDDVVG
Ga0318546_100869983	3300031771	Soil	MAILDRWHAPHPDRLSAMLLVLLMIAPVTLAHASPPDPTWVAGVYDQADFD
Ga0318547_101901683	3300031781	Soil	MSTLDRLHAPRPAGLSAMLLVLLIIAPVTLAHASPPDQTWLAGVYDQADFDDVVGFLTSA
Ga0318512_101719642	3300031846	Soil	MAILDRWHAPHPDRLSAMLLVLLMIAPVTLAHASPPDPTWVAGVYDQADFDDVVCLLTSALEATESTAAPEPRHCLALAPKLDQARV
Ga0318536_102405191	3300031893	Soil	MAILDRWHAPHPDRLSAMLLVLLMIAPVTLAHASPPDPTWVAGVYDQADFDDVVCLLTSA
Ga0310910_104886641	3300031946	Soil	MSTLDRLHAPRPAGLSAMLLVLLIIAPVTLAHASPPDQTWLAGVYDQADFDDVVGFL
Ga0310909_100751041	3300031947	Soil	MTVLDRLHVPRPAGLSAMLLVLLMIAPVTLAHASPPDPTWLAGVYDQADFDDVVGLLTSA
Ga0318558_101052771	3300032044	Soil	MAILDRWHAPHPDRLSAMLLVLLMIAPVTLAHASPPDPTWVAGVYDQADFDDVVCLLTSALEATESTAAPEPRHCLALAPKLD
Ga0318525_100140354	3300032089	Soil	MAILDRWHAPHPDRLSAMLLVLLMIAPVTLAHASPPDPTWVAGVYDQADFDDVVCLLTSALEA
Ga0307472_1005552811	3300032205	Hardwood Forest Soil	MIILDPLHAPRPLGLSVMLLAFLLIAPVTLADASLPDPTWVEGVYDQADFDDVVGFLTSSLEATGSTTTPELGACLTLTPKLW
Ga0310914_100473695	3300033289	Soil	MSTLDRLHAPRPAGLSAMLLVLLIIAPVTLAHASPPDQTWLAGVYDQADFDDVVGFLTSALEATDPTPAPEARSCLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061614

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences