Metagenome Family F061631

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061631
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	80 residues
Representative Sequence	AHIGALKPGHIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRRFMDTRPDLRVTLQGLVNRDLAGKLERLLS
Number of Associated Samples	113
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.85 %
% of genes near scaffold ends (potentially truncated)	94.66 %
% of genes from short scaffolds (< 2000 bps)	87.02 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.229 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.450 % of family members)
Environment Ontology (ENVO)	Unclassified (22.137 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.985 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.35% β-sheet: 15.69% Coil/Unstructured: 51.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00206	Lyase_1	15.27
PF00027	cNMP_binding	9.16
PF03916	NrfD	3.05
PF02518	HATPase_c	3.05
PF02515	CoA_transf_3	3.05
PF01042	Ribonuc_L-PSP	2.29
PF09394	Inhibitor_I42	2.29
PF00881	Nitroreductase	2.29
PF07690	MFS_1	2.29
PF13247	Fer4_11	1.53
PF13560	HTH_31	1.53
PF01699	Na_Ca_ex	1.53
PF10009	DUF2252	1.53
PF01663	Phosphodiest	1.53
PF13185	GAF_2	1.53
PF03200	Glyco_hydro_63	1.53
PF04392	ABC_sub_bind	0.76
PF10415	FumaraseC_C	0.76
PF08028	Acyl-CoA_dh_2	0.76
PF04831	Popeye	0.76
PF09364	XFP_N	0.76
PF00111	Fer2	0.76
PF02798	GST_N	0.76
PF00296	Bac_luciferase	0.76
PF02310	B12-binding	0.76
PF13533	Biotin_lipoyl_2	0.76
PF01568	Molydop_binding	0.76
PF01266	DAO	0.76
PF06826	Asp-Al_Ex	0.76
PF00924	MS_channel	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	3.05
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	2.29
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	1.53
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	1.53
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.76
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.76
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.76
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.76
COG2985	Uncharacterized membrane protein YbjL, putative transporter	General function prediction only [R]	0.76
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.23 %
Unclassified	root	N/A	29.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.23 %
Unclassified	root	N/A	29.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.23 %
Unclassified	root	N/A	29.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.27 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	12.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.34 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	12.98 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	6.87 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.82 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.29 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.76 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	12.21 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6.87 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	3.82 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	2.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	12.21 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	6.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.82 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	2.29 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	12.21 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.82 %
unclassified Candidatus Accumulibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter	2.29 %
Methylococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	12.21 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.82 %
Candidatus Accumulibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	2.29 %
unclassified Methylococcus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → unclassified Methylococcus	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	12.21 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.82 %
Candidatus Accumulibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	2.29 %
Methylococcus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → unclassified Methylococcus → Methylococcus sp.	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100367824	Not Available	838	Open in IMG/M
3300000559\|F14TC_103395009	Not Available	502	Open in IMG/M
3300000564\|RepKanNP_BrdU_F12BDRAFT_1004962	Not Available	830	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1015901	Not Available	814	Open in IMG/M
3300000955\|JGI1027J12803_108775031	Not Available	519	Open in IMG/M
3300004268\|Ga0066398_10005880	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300004463\|Ga0063356_104119209	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300004480\|Ga0062592_100564208	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300005093\|Ga0062594_101735069	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005167\|Ga0066672_10126031	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300005175\|Ga0066673_10171214	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300005186\|Ga0066676_10522471	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300005186\|Ga0066676_10626950	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300005293\|Ga0065715_10108061	All Organisms → cellular organisms → Bacteria	2738	Open in IMG/M
3300005294\|Ga0065705_10864049	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005329\|Ga0070683_100675435	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	989	Open in IMG/M
3300005332\|Ga0066388_100645132	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300005332\|Ga0066388_102284035	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300005332\|Ga0066388_104013837	Not Available	750	Open in IMG/M
3300005332\|Ga0066388_104677529	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300005344\|Ga0070661_101242053	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300005440\|Ga0070705_101197475	Not Available	626	Open in IMG/M
3300005468\|Ga0070707_102062401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	538	Open in IMG/M
3300005539\|Ga0068853_100402695	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300005545\|Ga0070695_100705777	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300005546\|Ga0070696_100895130	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005554\|Ga0066661_10157273	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300005557\|Ga0066704_10243286	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300005568\|Ga0066703_10584947	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300005764\|Ga0066903_103625020	All Organisms → cellular organisms → Bacteria → Proteobacteria	831	Open in IMG/M
3300005764\|Ga0066903_105443641	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005841\|Ga0068863_100697862	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1009	Open in IMG/M
3300005874\|Ga0075288_1016043	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300006049\|Ga0075417_10558173	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	579	Open in IMG/M
3300006058\|Ga0075432_10101963	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300006844\|Ga0075428_102344361	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300006847\|Ga0075431_100110254	All Organisms → cellular organisms → Bacteria	2840	Open in IMG/M
3300006852\|Ga0075433_10191040	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300006854\|Ga0075425_100186565	All Organisms → cellular organisms → Bacteria	2382	Open in IMG/M
3300006854\|Ga0075425_101118622	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300006854\|Ga0075425_102164386	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300006880\|Ga0075429_101540315	Not Available	578	Open in IMG/M
3300006881\|Ga0068865_100445263	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300006918\|Ga0079216_11457684	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300009012\|Ga0066710_104873918	Not Available	502	Open in IMG/M
3300009093\|Ga0105240_11645060	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	671	Open in IMG/M
3300009147\|Ga0114129_10942937	Not Available	1091	Open in IMG/M
3300009147\|Ga0114129_11280061	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300009156\|Ga0111538_10282700	All Organisms → cellular organisms → Bacteria	2100	Open in IMG/M
3300009162\|Ga0075423_10443117	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1364	Open in IMG/M
3300009162\|Ga0075423_10557806	Not Available	1206	Open in IMG/M
3300009553\|Ga0105249_11279880	Not Available	805	Open in IMG/M
3300009610\|Ga0105340_1104191	Not Available	1141	Open in IMG/M
3300009792\|Ga0126374_11242484	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	599	Open in IMG/M
3300010043\|Ga0126380_11365645	Not Available	620	Open in IMG/M
3300010046\|Ga0126384_12177136	Not Available	533	Open in IMG/M
3300010048\|Ga0126373_12562798	Not Available	568	Open in IMG/M
3300010320\|Ga0134109_10184821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	764	Open in IMG/M
3300010360\|Ga0126372_10103426	All Organisms → cellular organisms → Bacteria	2149	Open in IMG/M
3300010361\|Ga0126378_11739370	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	709	Open in IMG/M
3300010362\|Ga0126377_12706906	Not Available	571	Open in IMG/M
3300010398\|Ga0126383_10653002	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300010400\|Ga0134122_11401460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300010401\|Ga0134121_11807185	Not Available	638	Open in IMG/M
3300010403\|Ga0134123_10159271	All Organisms → cellular organisms → Bacteria → Proteobacteria	1878	Open in IMG/M
3300010403\|Ga0134123_12946025	All Organisms → cellular organisms → Bacteria → Proteobacteria	545	Open in IMG/M
3300012202\|Ga0137363_10460008	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300012203\|Ga0137399_10617770	Not Available	911	Open in IMG/M
3300012203\|Ga0137399_10901484	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	744	Open in IMG/M
3300012210\|Ga0137378_10682334	Not Available	938	Open in IMG/M
3300012211\|Ga0137377_11972617	Not Available	500	Open in IMG/M
3300012517\|Ga0157354_1024772	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	724	Open in IMG/M
3300012914\|Ga0157297_10464792	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300012917\|Ga0137395_10286442	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1164	Open in IMG/M
3300012929\|Ga0137404_10060186	All Organisms → cellular organisms → Bacteria	2943	Open in IMG/M
3300012961\|Ga0164302_10001207	All Organisms → cellular organisms → Bacteria → Proteobacteria	8013	Open in IMG/M
3300012984\|Ga0164309_10268470	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1213	Open in IMG/M
3300012989\|Ga0164305_10017320	All Organisms → cellular organisms → Bacteria	3668	Open in IMG/M
3300013100\|Ga0157373_10996665	Not Available	625	Open in IMG/M
3300013307\|Ga0157372_10508304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1405	Open in IMG/M
3300013500\|Ga0120195_1003643	Not Available	854	Open in IMG/M
3300015356\|Ga0134073_10219021	Not Available	641	Open in IMG/M
3300015371\|Ga0132258_10493693	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3060	Open in IMG/M
3300015371\|Ga0132258_11732002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1576	Open in IMG/M
3300015372\|Ga0132256_100011043	All Organisms → cellular organisms → Bacteria	7819	Open in IMG/M
3300016357\|Ga0182032_11990398	Not Available	510	Open in IMG/M
3300016404\|Ga0182037_10258082	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1382	Open in IMG/M
3300017654\|Ga0134069_1291378	Not Available	576	Open in IMG/M
3300017965\|Ga0190266_10936263	Not Available	573	Open in IMG/M
3300018482\|Ga0066669_10608515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	958	Open in IMG/M
3300025930\|Ga0207701_10072996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3114	Open in IMG/M
3300025938\|Ga0207704_10937902	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	729	Open in IMG/M
3300026523\|Ga0209808_1029269	All Organisms → cellular organisms → Bacteria	2663	Open in IMG/M
3300026536\|Ga0209058_1034117	All Organisms → cellular organisms → Bacteria	3095	Open in IMG/M
3300027533\|Ga0208185_1129379	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300027646\|Ga0209466_1040480	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	948	Open in IMG/M
3300027682\|Ga0209971_1181487	Not Available	519	Open in IMG/M
3300027765\|Ga0209073_10113048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	971	Open in IMG/M
3300027909\|Ga0209382_10932022	Not Available	911	Open in IMG/M
3300028381\|Ga0268264_12070945	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	578	Open in IMG/M
3300028536\|Ga0137415_11068689	Not Available	620	Open in IMG/M
3300031546\|Ga0318538_10360835	Not Available	785	Open in IMG/M
3300031572\|Ga0318515_10383010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	753	Open in IMG/M
3300031719\|Ga0306917_10242089	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300031720\|Ga0307469_10846278	Not Available	843	Open in IMG/M
3300031736\|Ga0318501_10538767	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	638	Open in IMG/M
3300031740\|Ga0307468_100971517	Not Available	744	Open in IMG/M
3300031740\|Ga0307468_101906339	Not Available	566	Open in IMG/M
3300031751\|Ga0318494_10149935	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300031819\|Ga0318568_10480474	Not Available	775	Open in IMG/M
3300031847\|Ga0310907_10315964	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	791	Open in IMG/M
3300031854\|Ga0310904_11268631	Not Available	533	Open in IMG/M
3300031859\|Ga0318527_10421180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	569	Open in IMG/M
3300031908\|Ga0310900_10681855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → unclassified Methylococcus → Methylococcus sp.	821	Open in IMG/M
3300032002\|Ga0307416_100648675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	1140	Open in IMG/M
3300032004\|Ga0307414_11279817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	680	Open in IMG/M
3300032010\|Ga0318569_10113433	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300032013\|Ga0310906_11046631	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300032043\|Ga0318556_10236868	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300032055\|Ga0318575_10038246	All Organisms → cellular organisms → Bacteria	2145	Open in IMG/M
3300032059\|Ga0318533_10457946	Not Available	934	Open in IMG/M
3300032076\|Ga0306924_10041076	All Organisms → cellular organisms → Bacteria	5076	Open in IMG/M
3300032076\|Ga0306924_10399817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1573	Open in IMG/M
3300032076\|Ga0306924_11983668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	601	Open in IMG/M
3300032174\|Ga0307470_10596728	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	825	Open in IMG/M
3300032205\|Ga0307472_101352939	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	688	Open in IMG/M
3300032205\|Ga0307472_102396547	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	535	Open in IMG/M
3300032261\|Ga0306920_100103488	Not Available	4217	Open in IMG/M
3300033289\|Ga0310914_10467739	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1141	Open in IMG/M
3300033412\|Ga0310810_11056218	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	684	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.81%
Host-Associated	Host-Associated	25.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.28%
Plants	Host-Associated → Plants	25.19%
Aquatic	Environmental → Aquatic	1.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.63%
Sediment	Environmental → Aquatic → Sediment	1.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.03%
Loam	Environmental → Terrestrial → Soil → Loam	14.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.58%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.05%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.58%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.29%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.53%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.53%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.53%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.76%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000564	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B	Environmental	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013500	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T4.rep2	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1003678241	3300000559	Soil	EGEPVSRLCIPIAGSAEVRKQGQSVVQLRIGHQQVAALALTGSPSPVEATFIEPARYMSWPLPSLRAFMDKRPDLRVALQGLVSRDLAGKVERLAEPERPV*
F14TC_1033950091	3300000559	Soil	EVRKHGKQVGNFHPGDIIGTALALTGSPSPVEVTFTEPARYMRWPLESLRTFMDKRPELRVTLLGHVNRDLAGKLERALPQ*
RepKanNP_BrdU_F12BDRAFT_10049621	3300000564	Soil	EPVSRLCMAITGRAHVDKQGRRIGTLEPGHIVGTTLALTGAPSPVDATFSEPARYMSWPLSSLRTFMDKRPELRVTLQGLVSRDLAGKLERLLS*
KanNP_Total_noBrdU_T14TCDRAFT_10159012	3300000596	Soil	TGLALTGEPSPVEVTFTEPARYMRWSLPSLRRFMDTRPDLRVTLQGLVNRDLAEKLNFVVKET*
JGI1027J12803_1087750311	3300000955	Soil	SSVCISITGSAEARKQNDRIGTFRPGHIIGTALALTGAPSQLEIVFTEPARYMRWSLPNLRAFMDKRPDLRVTLQQLVNRDLAGKLEKLLSPS*
Ga0066398_100058801	3300004268	Tropical Forest Soil	VCIAITGSAEVRKQSDRIGALGPGHIIGTALALAGAPSPVDIAFTEPARYMRWSVPNLRSFVDKRPDLRVTLQQHVNRDLAGKLEKLLTAR*
Ga0063356_1041192091	3300004463	Arabidopsis Thaliana Rhizosphere	SADVRSHGERIGALQPGHIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRRFVDMRPDLRVMLQGLVNRDLAQKLNTVIKDQNGAHERT*
Ga0062592_1005642082	3300004480	Soil	HGERIGALTPGHIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRRFMDARPDLRVTLQGLVNRDLARKLERALS*
Ga0062594_1017350692	3300005093	Soil	GSADVHRRGERIGALTPGHIIGTALALTGEPSPVEVIFTEPARYMRWSLPSLRRFMDSRPDLRVALQGLVNRDLAEKLNLVMKET*
Ga0066672_101260311	3300005167	Soil	SCLCIPITGSADVRRRGERIGAVRPGNIIGTALALTGEPSPVEVTFAEPARYMRWSLPSLRRFMDKRPDLRVTLQGLVNRDLAGKLERLMS*
Ga0066673_101712142	3300005175	Soil	NIIGTALALTGEPSPVEVTFAEPARYMRWSLPSLRSFMDKRPDLRVTLQGLVNRDLAGKLERLMS*
Ga0066676_105224712	3300005186	Soil	TGSADVRRRGERIGAVRPGNIVGTALALTGEPSPVEVTFTEPTRYMRWSLPSLRRFMDKRPDLRVTLQGLVNRDLAGKLERLLS*
Ga0066676_106269502	3300005186	Soil	SSLSIPITGSADVHSRGERIGALTPGHIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRRFMDTRPGLRVTLQGLVSRDLAEKLNLVVKET*
Ga0065715_101080611	3300005293	Miscanthus Rhizosphere	ATLKPGQIIGNALALAADPSPVEMTFAEPARYMRWSLPSLRKFIDGRPDLRVILQGLVNRDLAQKLETVLS*
Ga0065705_108640492	3300005294	Switchgrass Rhizosphere	EGELVAHVAVAIRGNADVYRRGERIGQLSPGHIIGTALALTGDPSPVGITFAEPARYMRWSLPSLRRFMDKRPDLRVALQSLVNRDLAGKLGGLLSP*
Ga0070683_1006754351	3300005329	Corn Rhizosphere	NAEVHKEGEHIATLKPGQIIGNALALAADPSPVEMTFAEPARYMRWSLPSLRKFIDGRPDLRVILQGLVNRDLAQKLETVLS*
Ga0066388_1006451321	3300005332	Tropical Forest Soil	IGMLRPGYIIGNALALSGDPSPVEMTFAEPARYMRWSLPTLRRFVDNRPDLRVTLQGLVNRDLARKLETVLS*
Ga0066388_1022840351	3300005332	Tropical Forest Soil	IGMLRPGYIIGNALALSGDPSPVEMTFAEPARYMRWSLPSLRRFVDNRPDLRVTLQGLMNRDLARKLETVLS*
Ga0066388_1040138371	3300005332	Tropical Forest Soil	GKDLVSLKPGHLIGTALALAGDPSPVDATFADSARYMCWPLHNIRSFLDRRPELRVNLQGLVNRDLAGKLEGLVSA*
Ga0066388_1046775292	3300005332	Tropical Forest Soil	PIAGSAEVRKQGERIAALRPGQIIGTSLALTGDPSPVEVAFTEPARYMRWSLPSLRSFIDKRPDLRLTLQGLVNRDLAGKLERLLSP*
Ga0070661_1012420532	3300005344	Corn Rhizosphere	HGERIGALQPGHIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRRFVDMRPDLRVMLQGLVNRDLAQKLNTVIKDQNGAHERT*
Ga0070705_1011974751	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	ESVSCLCIPITGNAEVRKQGEHIETLRPGHIIGTSLALTGEPSPVEVTFTEPARYMRWSLPSLRSFMDKRPDLRVTLQRLVNRDLAGKLERLLS*
Ga0070707_1020624012	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VSCLCIPITGSADVRRRGERIGALRPGHIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRRFMDKRPDLRVTLQGLVNRDLAGKLERLLS*
Ga0068853_1004026951	3300005539	Corn Rhizosphere	GAAEVQKSGERIGELKPGHIIGTALAFTGDPSPVRVTFTEPARYMHWSLSSLRRFVDMRPDLRTALQGLISRDLAQKLNTVIQNQGDAQQRR*
Ga0070695_1007057772	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	PGHMIGTALALTGEPSPIKVTFTETARYMHWSLANLRRFLDVRPDLRVRLQSLVNRDLAEKLNVIVKEQMARTDARG*
Ga0070696_1004925742	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	GELKPGHIIGTALAFTGDPSPVRVTFTEPARYMHWSLSSLRRFVDMRPDLRTALQGLISRDLAQKLNTVIQNQGDAQQRR*
Ga0070696_1008951302	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	SIPITGSADVHRRGERIGALTPGHIIGTALALTGEPSPVEVIFTEPARYMRWSLPSLRRFMDSRPDLRVALQGLVNRDLAEKLNLVMKET*
Ga0066661_101572732	3300005554	Soil	GEPVSCLCIPITGSADVRRRGERIGAVRPGNIIGTALALTGEPSPVEVTFAEPARYMRWSLPSLRRFMDKRPDLRVTLQGLVNRDLAGKLERLMS*
Ga0066704_102432862	3300005557	Soil	IPITGSADVHSRGERIGALTPGHIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRRFMDTRPDLRVMLQGLESRDLAEKLNLVVKET*
Ga0066703_105849472	3300005568	Soil	PITGSADVRRRGERIGAVRPGNIIGTALALTGEPSPVEVTFAEPARYMRWSLPSLRRFMDKRPDLRVTLQGLVNRDLAGKLERLMS*
Ga0066903_1036250202	3300005764	Tropical Forest Soil	GTALALTGDPSPVEIAFAESARYMCWPLASLRRFIDKRPDLRVALQQLVNRDLVSKLGTLVPP*
Ga0066903_1054436411	3300005764	Tropical Forest Soil	QIIGTTLALTGGVSPVDAAFTGRARYMCWPLSGIRAFLDKRPELRVTLQGLVNRDLAGKVERLLSV*
Ga0068863_1006978622	3300005841	Switchgrass Rhizosphere	LEPGHIVGTALALTGAPSPVEATFTGPGRYMSWPLPSLRAFMDKRPELRVALQSLVSRDLAGKLERLLV*
Ga0075288_10160431	3300005874	Rice Paddy Soil	SADVRRRGERIGAVRPGNIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRRFMDKRPDLRVTLQGLVNRDLAGKLERLMS*
Ga0075417_105581732	3300006049	Populus Rhizosphere	IIGTSLALTGEPSPVEVIFTEPARYMRWSLPSLRRFMDKRPDLRVTLQRLVNRDLAGKLERLLS*
Ga0075432_101019632	3300006058	Populus Rhizosphere	ISGAAEVQKSGERIGELKPGHIIGTALAFTGDPSPVRVTFTEPARYMHWSLSSLRRFVDMRPDLRTALQGLISRDLAQKLNTVIQNQGDAQQRR*
Ga0075428_1023443612	3300006844	Populus Rhizosphere	PGHIIGTAIAMAGAPSPVEATFAEPARYMAWPLASLRTFMDKRPDLRIALQGLVSRDLAGKLERLLPQ*
Ga0075431_1001102544	3300006847	Populus Rhizosphere	CLCIPITGNAEVRKQGEHIETLRPGHIIGTSLALTGEPSPVEVIFTEPARYMRWSLPSLRSFMDKRPDLRVTLQRLVNRDLAGKLERLLS*
Ga0075433_101910401	3300006852	Populus Rhizosphere	IGNALALAADPSPVEMTFAEPARYMRWSLPSLRKFIDGRPDLRVILQGLVNRDLAQKLETVLS*
Ga0075425_1001865654	3300006854	Populus Rhizosphere	SRICVAISGRADVHKQGQHIGTLEPGHLIGTAVALMGASSPVEATFTEPSRYMSWPVSSLRTFVDKRPDMRVTLQGLVSRDLATKLERLLS*
Ga0075425_1011186221	3300006854	Populus Rhizosphere	PGHIIGTSLALTGEPSPVDATFTESARYMCWPLRDLRSFLDRRPDLRVTLQGLVNHDLARKLDTLLGQGFA*
Ga0075425_1021643861	3300006854	Populus Rhizosphere	ALRGVPSPVEVTFIAPARYMSWPLPSLLAFMDRRPDLRVALQSLASHDLTRKIDRLLAER
Ga0075429_1015403152	3300006880	Populus Rhizosphere	EPASSVCIPITGSADVHRRGERIGAVRPGNIIGTALALTGEPSPVEVTFTEPTRYMRWSLPSLRRFMDKRPDLRVTLQSLVNRDLAGKLERLLS*
Ga0068865_1004452632	3300006881	Miscanthus Rhizosphere	RIGELKPGHIIGTALAFTGDPSPVRVTFTEPARYMHWSLSSLRRFVDMRPDLRTALQGLISRDLAQKLNTVIQNQGDAQQRR*
Ga0079216_114576841	3300006918	Agricultural Soil	RKQGASIGALTPGHIIGTGLALTGEPSPVEVTFTEPARYMRWPLPGLRSFMDKRPNLRVALQGLVNRDLAGKLERLLS*
Ga0066710_1048739182	3300009012	Grasslands Soil	SCLCIPITGSADVRRRGERIGAVRPGNIIGTALALTGEPSPVEVTFAEPARYMRWSLPSLRRFMDKRPDLRVTLQGLVNRDLAGKLERLMS
Ga0105240_116450601	3300009093	Corn Rhizosphere	VIEGEPAARLCIAISGSAEVRKENRPLGILEPGHIIGTALALRGVPSPVEVTFIAPARYMSWPLPSLLAFMDRRPDLRVALQSLASHDLTRKIDRLLAER*
Ga0114129_109429371	3300009147	Populus Rhizosphere	PGHIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRRFMDTRPDLRVTLQGLVNRDLAEKLNFVVKET*
Ga0114129_112800612	3300009147	Populus Rhizosphere	GHIIGTSLALTGAPSPVEIAFTEPARYMRWSVPNLRSFMDKRPDLRVTLQHLVNRDLAGKLEKLLSP*
Ga0111538_102827001	3300009156	Populus Rhizosphere	QIGTLRPGHIIGNALALTGERSPVEMTFAEPARYLRWSLPNLRAFMDKRPDLRVTLQGLVNRDLARKLETVLS*
Ga0075423_104431171	3300009162	Populus Rhizosphere	IVGTALALTGAPSPVEATFTGPGRYMSWPLPNLRAFMDKRPELRVALQSLVSRDLAGKLERLLV*
Ga0075423_105578062	3300009162	Populus Rhizosphere	PGNIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRRFMDKRPDLRVTLQGLVNRDLAGKLERLLS*
Ga0105249_112798802	3300009553	Switchgrass Rhizosphere	PIAGSADVRRQGRPVGRLEPGHIIGTALALTGAPSPVEATFTEPARYMSWPLPSLRAFMDKRPDLRVALQALVSRDLAVKVEGLLPQ*
Ga0105340_11041912	3300009610	Soil	DVRKQGASIGALRPGNIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRSFMDKRPELRVTLQGLVNRDLAGKLERVLS*
Ga0126374_112424841	3300009792	Tropical Forest Soil	IIGTALALTGDPSPVEIAFAEPARYMCWPLASLRRFIDKRPDLRVALQQLVNRDLVSKLGTLVPP*
Ga0126380_113656451	3300010043	Tropical Forest Soil	GRADVRKQGQRIGTLEPGHLIGTALGLTGAPSPVEATFTEPSRYMSWPLASLRTFADKRPDLRVTLQGLVNRDLASKLERVLS*
Ga0126384_121771362	3300010046	Tropical Forest Soil	LALTGDPSPVDATFTKTSRYMCWPLQSIRSFMDRRPDLRVTLQGLVNRDLALKLEQVISARAGDATA*
Ga0126373_125627982	3300010048	Tropical Forest Soil	VRRRGERIGALKPGHIIGTALALTGESSPVEVTFTEPARYMRWSLPSLRRFMDKRPDLRVTLQGLVNRDLAGKLERLLS*
Ga0134109_101848212	3300010320	Grasslands Soil	ALTGDPSPVDATFTSTARYMCWPLQSIRSFLDRRPDLRVTLQGLVNRELAGKLERVLSMLAGDTRA*
Ga0126372_101034261	3300010360	Tropical Forest Soil	GEPVSCLCIPITGSAEVRKQGEPIGALRPGQIIGTAAFTGDPSPVEVTFTEPARYMWWSLPSLRRFVDQRPDLRVTLQGLVNRDLAGKVERLLPP*
Ga0126378_117393702	3300010361	Tropical Forest Soil	SIAGQAEVRRQGQRLTTLAPGQIIGTALALTGDPSPVEIAFAEPARYMCWPLASLRRFIDKRPDLRVALQQLVNRDLVSKLGTLVPP*
Ga0126377_127069061	3300010362	Tropical Forest Soil	SVCIPIAGTAEVRRHGNRLGAFEPGHIIGSALALTGAPSPIEATFTEPGRYMRWPLEHLRVFMDRRPDLRVTLQQRVNRDLAGKLERAVPQ*
Ga0126383_106530021	3300010398	Tropical Forest Soil	ITGRAAADAHGKRIGEVGPGHIIGTALALTGEPSPIDITFTQPARYMRWSLPSLRRFMDKRPDLRGALQSLVNRDLAGKVEELLPR*
Ga0134122_114014601	3300010400	Terrestrial Soil	GERIGTLRPGHIIGNALALSGDPSPVEMTFKEPARYMSWSLPSLRRFIDQRPNLRVALQSLVNRDLAGKLETLLS*
Ga0134121_118071852	3300010401	Terrestrial Soil	SIPITGSADVHKQGERIGAVGPGHMIGTALALTGEPSPIKVTFTEPARYMHWSLANLRRFLDVRPDLRVRLQGLVNRDLAEKLNVIVKQQTARADAHG*
Ga0134123_101592713	3300010403	Terrestrial Soil	CIAIAGSAEVSKQGERIGTLRPGHIIGNALALSGDPSPVEMTFKEPARYMSWSLPSLRRFIDQRPNLRVALQSLVNRDLAGKLETLLS*
Ga0134123_129460252	3300010403	Terrestrial Soil	AHIGALKPGHIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRRFMDTRPDLRVTLQGLVNRDLAGKLERLLS*
Ga0137363_104600083	3300012202	Vadose Zone Soil	ERIGALTPGHIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRRFMDTRPDLRVTLQGLVSRDLAEKLNLVVKET*
Ga0137399_106177702	3300012203	Vadose Zone Soil	SCLCIPITGGADVRRRGERIGALRPGNIIGTALALTGEPSPMEVTFTEPARYMRWSLPSLRRFMDTRPDLRVTLQGLVNRDLAGKLERLMS*
Ga0137399_109014842	3300012203	Vadose Zone Soil	GGADVYRRGERIGRLSPGHIIGTALALTGDPSPVAITFAEPARYMRWSLPSLRRFMDKRPDLRVALQSLVNRDLAGKLGTLMSP*
Ga0137378_106823341	3300012210	Vadose Zone Soil	NIIGTALALTGEPSPVEVTFAEPARYMRWSLPSLRRFMDTRPDLRVTLQGLVNRDLAGKLERLLS*
Ga0137377_119726171	3300012211	Vadose Zone Soil	PVGLLEPGHIIGTALALTGAPSPVDATFTEPARYMSWPLPSLRAFMDKRPDLRVALQALVSRDLAVKVERLLPQ*
Ga0157354_10247722	3300012517	Unplanted Soil	ENRPLGILEPGHIIGTALALRGVPSPVEVTFIAPARYMSWPLPSLLAFMDRRPDLRVALQSLASHDLTRKIDRLLAER*
Ga0157297_104647921	3300012914	Soil	GTAEVHRSGERIGELTPGHIIGTALSLTGGPSPVRVTFTEPARYMHWSLSSLRRFVDMRPDLRTALQGLISRDLAQKLNTVIQNQGDAQQRR*
Ga0137395_102864423	3300012917	Vadose Zone Soil	LCIPIAGSAEVRKQGKPVGLIEPGHIIGTALALTGAPSPVDATFTEPARYMSWPLPSLRAFMDKRPDLRVALQALVSRDLAVKVERLLPQ*
Ga0137404_100601861	3300012929	Vadose Zone Soil	IIGTALALTGEPSPVEVTFAEPARYMRWSLPSLRRFMDKRPDLRVTLQGLVNRDLAGKLERLLS*
Ga0164302_100012076	3300012961	Soil	VPEGEPVSCLCIAITGNAEVHKEGEHIATLKPGQIIGNALALAADPSPVEMTFAEPARYMRWSLPSLRKFIDGRPDLRVILQGLVNRDLAQKLETVLS*
Ga0164309_102684701	3300012984	Soil	IAITGNAEVHKEGEHIATLKPGQIIGNALALAADPSPVEMTFAEPARYMRWSLPSLRKFIDGRPDLRVILQGLVNRDLAQKLETVLS*
Ga0164305_100173201	3300012989	Soil	TGNAEVHKEGEHIATLKPGQIIGNALALAADPSPVEMTFAEPARYMRWSLPSLRKFIDGRPDLRVILQGLVNRDLAQNLETVLS*
Ga0157373_109966651	3300013100	Corn Rhizosphere	RIGTLHPGHIIGTALALTAAPSPAEIVFTEPARYMRWSLPDLRAFMDKRPDLRVTLQQLVNRDLAGKLEKMLSPS*
Ga0157372_105083042	3300013307	Corn Rhizosphere	VRKENRPLGILEPGHIIGTALALRGVPSPVEVTFIAPARYMSWPLPSLLAFMDRRPDLRVALQSLASHDLTRKIDRLLAER*
Ga0120195_10036431	3300013500	Terrestrial	VSEATRTRIGALAPGHIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRRFMDARPDLRMTLQSLVNRDLAEKLNLAVKET*
Ga0134073_102190212	3300015356	Grasslands Soil	IGTILALTGDPSPVDATFTTTARYMCWPLQSIRSFLDRRPDLRVTLQGLVNRELAGKLERVLSMLAGDTRA*
Ga0132258_104936934	3300015371	Arabidopsis Rhizosphere	GEHIATLKPGQIIGNALALAADPSPVEMTFAEPARYMRWSLPSLRKFIDGRPDLRVILQGLVNRDLAQKLETVLS*
Ga0132258_117320023	3300015371	Arabidopsis Rhizosphere	GEHIATLKPGQIIGNALALAADPSPVEMTFAEPARYMRWSLASLRKFIDSRPDLRVILQGLVNRDLAQKLETVLS*
Ga0132256_1000110439	3300015372	Arabidopsis Rhizosphere	GEVKPGHIIGTALALTGDPSPVRVTFTEHARYMRWSLSSLRGFVDMRPDLRVTLRGLVNRDLAQKLNTVVKEQNGTQERT*
Ga0182032_119903981	3300016357	Soil	TLEPGHVIGTALALTGEPSPVQATFTDSARYMCWPLQSLRSFVDKRPELRTALQGLVNHDLARKLQVLLPTK
Ga0182037_102580821	3300016404	Soil	MRLCIAIAGSAEVHKQGKRVGVLEPGQMIGTSLALTGAQSPVDATFTEPARYISWPVESLRTFADKRPDLRVTLQALVSRDLARKVEELMS
Ga0134069_12913781	3300017654	Grasslands Soil	RRGERIGAVRPGNIIGTALALSGEPSPVEVTFAEPARYMRWSLPSLRSFMDKRPDLRVTLQGLVNRDLAGKLERLMS
Ga0190266_109362632	3300017965	Soil	VRKQGASIGALRPGEIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRSFMDKRPELRVTLQGLVNRDLAGKLERVLS
Ga0066669_106085151	3300018482	Grasslands Soil	IGALTPGHIIGTGLALTGEPSPVEVTFTEPARYMRWSLPSLRRFMDTRPDLRVTLQGLVNRDLAGKLERLLS
Ga0207701_100729962	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VSCLCIAITGNAEVHKEGEHIATLKPGQIIGNALALAADPSPVEMTFAEPARYMRWSLPSLRKFIDGRPDLRVILQGLVNRDLAQKLETVLS
Ga0207704_109379022	3300025938	Miscanthus Rhizosphere	RRQGRPVGRLEPGHIIGTALALTGAPSPVEATFTEPARYMSWPLPSLRAFMDKRPDLRVALQGLVSRDLAVKVEGLLPQ
Ga0209808_10292693	3300026523	Soil	GAVRPGNIIGTALALTGEPSPVEVTFAEPARYMRWSLPSLRRFMDKRPDLRVTLQGLVNRDLAGKLERLMS
Ga0209058_10341171	3300026536	Soil	GAVRPGNIIGTALALTGEPSPVEVTFAEPARYMRWSLPSLRSFMDKRPDLRVTLQGLVNRDLAGKLERLMS
Ga0208185_11293791	3300027533	Soil	DVRKQGASIGALRPGNIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRSFMDKRPELRVTLQGLVNRDLAGKLERVLS
Ga0209466_10404802	3300027646	Tropical Forest Soil	TLAPGQIIGTALALTGDPSPVEIAFAEPARYMCWPLASLRRFIDKRPDLRVALQQLVNRDLVTKLGTLMPP
Ga0209971_11814872	3300027682	Arabidopsis Thaliana Rhizosphere	ARLCIAISGSAEVRKENRPLGILEPGHIIGTALALRGVPSPVEVTFIAPARYMSWPLPSLLAFMDRRPDLRVALQSLASHDLTRKIDRLLAER
Ga0209073_101130481	3300027765	Agricultural Soil	GSAEVHKQGEHLGTLRPGHIIGNALALTGDPSPVEMTFAEPARYMRWALPSLRKFIDSRPDLRVTLQGLVNRDLAGKLDTVLS
Ga0209382_109320221	3300027909	Populus Rhizosphere	CVAISGRADVHKQGQHIGTLEPGHLIGTAVALMGASSPVEATFTEPSRYMSWPVSSLRTFVDKRPDMRVTLQGLVSRDLATKLERLLS
Ga0268264_120709451	3300028381	Switchgrass Rhizosphere	RRQGRPVGRLEPGHIIGTALALTGAPSPVEATFTEPARYMSWPLPSLRAFMDKRPDLRVALQALVSRDLAVKVEGLLPQ
Ga0137415_110686891	3300028536	Vadose Zone Soil	GLLEPGHIIGTALALTGAPSPVDATFTEPARYMSWPLPSLRAFMDKRPDLRVALQALVSRDLAVKVERLLPQ
Ga0318538_103608352	3300031546	Soil	SVGTLTPGHILGTGLALTGSPSPVEATFTGSARYMSWPVPSLRTFIDKRPDLRVALQALFSRDLAEKIERLIAP
Ga0318515_103830101	3300031572	Soil	ISGSAEVRKGGRPVGTLEPGQIVGTTLALTGSRSPVEATFTGSARYMSWPVESLRTFIDKRPDLRVALQGLVSRDLAGKVERLLVP
Ga0306917_102420891	3300031719	Soil	IPISGKAEVRKAGRPVGTLEPGHIVGTAFALTGSPSQVEATFTGSARYMSWPVASLRTFIDRRPDLRVALQGLVNRDLAWKLERLMVP
Ga0307469_108462782	3300031720	Hardwood Forest Soil	SIAGSAEVRKRGELIGTMSPGHIIGTALALAGDPSPVEVTFTGPARYMRWSLPILRKFVDRRPDLRVTLQGLVSRDLARKVEALLS
Ga0318501_105387672	3300031736	Soil	PGHIIGNALALTGDPSPVEMTFAEPARYMRWALPSLRKFIDSRPDLRVTLQGLVNHDLARKLETVLS
Ga0307468_1009715172	3300031740	Hardwood Forest Soil	LVGTALALTGNPSPVEAAFTEPARYLCWPLLNLRTFMDRKPELRATLQRLVNQDLAGKVERTVVGDEMTSG
Ga0307468_1019063392	3300031740	Hardwood Forest Soil	HIIGTAMAFTGDPSPVEVTFTEPTRYMRWSLPSLRRFIDKRPDLRVALQALVNRDLAGKLEKLMSL
Ga0318494_101499351	3300031751	Soil	GKADVRKAGRPVGTLEPGHIVGMAFALTGSPSQVEATFTGSARYMSWPVASLRTFIDRRPDLCVALQGLVNRDLAWKLERLMVP
Ga0318568_104804741	3300031819	Soil	HIVGTAFALTGSPSQVEATFTGSARYMSWPVASLRTFIDRRPDLRVALQGLVNRDLAWKLERLMVP
Ga0310907_103159641	3300031847	Soil	LCISIAGNAEVRKQGRPIGTLEPGHIIGTAMAMTGSPAPIEATFTQPARYMAWPLASLRTFMDKRPDLRIVLQGLVSRDLAGKLERLLPQ
Ga0310904_112686312	3300031854	Soil	VEVRNQGKPVGRLEPGRIIGTALGLTGAPSPVEATFTEPARYMSWSVPSLRTFMDKRPDLRVALQALVSRDLAGKVEQLLPQSGSERR
Ga0318527_104211801	3300031859	Soil	GQIVGTTLALTGSRSPVEATFTGSARYMSWPVESLRTFIDKRPDLRVALQGLVSRDLAGKVERLLVP
Ga0310900_106818551	3300031908	Soil	VGNFHPGNIIGTALALTGSPSPIEATFTEPGRYMRWPLESLRTFMDKRPELRVTLLGHVNRDLAGKLERALPQ
Ga0307416_1006486751	3300032002	Rhizosphere	LSIPITGAADVHSRGERIGALTPGHIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRRFMDTRPDLRVTLQGLVNRDLARKLERALS
Ga0307414_112798172	3300032004	Rhizosphere	LTPGHIIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRRFMDTRPDLRVTLQGLVNRDLARKLERALS
Ga0318569_101134332	3300032010	Soil	PVMRLCIAIAGSAEVHKQGKRVGVLEPGQMIGTSLALTGAQSPVDATFTEAARYISWPVESLRTFADKRPDLRVTLQALVSRDLARKVEELMS
Ga0310906_110466312	3300032013	Soil	DVRKQGAHIGALRPGHLIGTALALTGEPSPVEVTFTEPARYMRWSLPSLRSFMDKRPELRITLQGLVNRDLAGKLERVLP
Ga0318556_102368681	3300032043	Soil	IPISGKAEVRKAGRPLGTLEPGHIVGTAFALTGSPSQVEATFTGSARYMSWPVASLRTFIDRRPDLRVALQGLVNRDLAWKLERLMVP
Ga0318575_100382466	3300032055	Soil	VGTAFALTGSPSQVEATFTGSARYMSWPVASLRTFIDRRPDLRVALQGLVNRDLAWKLERLMVP
Ga0318533_104579462	3300032059	Soil	EGEPVSFLCIPIAGRAEVRKQGTRIAALRPGQIIGTSVALTGDPSPVEVAFTEPARYMRWSLSSLRRFIDRRPDLRLTLQGLVNRDLASKLEGLLLH
Ga0306924_100410767	3300032076	Soil	QGKRVGVLEPGQMIGTSLALTGAQSPVDATFTEPARYISWPVESLRTFADKRPDLRVTLQALVSRDLARKVEELMS
Ga0306924_103998171	3300032076	Soil	KAGRAVGTLESGHIVGTAFALTGSPSQVEATFTGSARYISWPVASLRTFIDRRPDLRVALQGLVNRDLAWKLEQLIVP
Ga0306924_119836682	3300032076	Soil	LCISISGSAEVRKGGRPVGTLEPGQIVGTTLALTGSRSPVEATFTGSARYMSWPVESLRTFIDKRPDLRVALQGLVSRDLAGKVERLLVP
Ga0307470_105967282	3300032174	Hardwood Forest Soil	NDRIGTFRPGHIIGTALALTGAPSQLEIVFTEPARYMRWSLPNLRTFMDKRPDLRVTLQQLVNRDLAGKLEKLLSPS
Ga0307472_1013529391	3300032205	Hardwood Forest Soil	RKQGRPVGRLEPGHIIGTALALTGAPSPVEVTFAEPARYMSWPLPSLRAFMDKRPDLRVALQALVSRDLAVKVEGLLPQ
Ga0307472_1023965472	3300032205	Hardwood Forest Soil	VGTALALTGAPSPVEATFTEPARYMSWSLPSLRTFMDKRPDLRVALQALVSRDLAGKVEQLLPQSGSERR
Ga0306920_1001034885	3300032261	Soil	IVGTAFALTGSPSQVEATFAGSARYMSWPVASLRTFIDRRPDLRVALQGLVNRDLAWKLEQLIVP
Ga0310914_104677391	3300033289	Soil	EHLGTLRPGHIIGNALALTGDPSPVEMTFAEPARYMRWALPSLRKFIDSRPDLRVTLQGLVNHDLARKLETVLS
Ga0310810_110562181	3300033412	Soil	VSRLCISIAGSAEVRKQGRPVGRFEPGHIIGTALALTGSPSPVEATFTEPARYMSWPLQSLRAFMDKRPDLRVALQALISRDLAGKVEGLLPRSGSEVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F061631

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences