Metagenome / Metatranscriptome Family F061687

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061687
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	70 residues
Representative Sequence	MSSPLFLCAWCGGGAEDEQSLRDHQEWCLADARANTQLLNDVAERDGELTQEALVAAAKKRRLAPKRQN
Number of Associated Samples	103
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.47 %
% of genes near scaffold ends (potentially truncated)	19.85 %
% of genes from short scaffolds (< 2000 bps)	81.68 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.969 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.794 % of family members)
Environment Ontology (ENVO)	Unclassified (22.137 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.618 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.18% β-sheet: 4.12% Coil/Unstructured: 56.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.140.1.0: automated matches	d7kesa_	7kes	0.56498
c.41.1.0: automated matches	d6f9ma_	6f9m	0.55732
c.77.1.0: automated matches	d5hn3a_	5hn3	0.55649
c.93.1.0: automated matches	d5c5ca_	5c5c	0.55636
c.37.1.20: Extended AAA-ATPase domain	d1lv7a_	1lv7	0.55576

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00491	Arginase	36.64
PF00719	Pyrophosphatase	35.88
PF02730	AFOR_N	9.16
PF02737	3HCDH_N	3.82
PF01370	Epimerase	1.53
PF00725	3HCDH	1.53
PF13855	LRR_8	0.76
PF03462	PCRF	0.76
PF02371	Transposase_20	0.76
PF02589	LUD_dom	0.76
PF02517	Rce1-like	0.76
PF13183	Fer4_8	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	36.64
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	35.88
COG2414	Aldehyde:ferredoxin oxidoreductase	Energy production and conversion [C]	9.16
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	5.34
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	3.82
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	3.82
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	3.82
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	3.82
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	3.82
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	3.82
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	0.76
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	0.76
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.76
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.97 %
Unclassified	root	N/A	16.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.97 %
Unclassified	root	N/A	16.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.97 %
Unclassified	root	N/A	16.03 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	53.44 %
Unclassified	root	N/A	16.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	50.38 %
Unclassified	root	N/A	16.03 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	22.90 %
Unclassified	root	N/A	16.03 %
Thermoflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia	0.76 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	22.90 %
Unclassified	root	N/A	16.03 %
Thermoflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → Thermoflexales	0.76 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	22.90 %
Unclassified	root	N/A	16.03 %
Thermoflexaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → Thermoflexales → Thermoflexaceae	0.76 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	22.90 %
Unclassified	root	N/A	16.03 %
Thermoflexus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → Thermoflexales → Thermoflexaceae → Thermoflexus	0.76 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	22.90 %
Unclassified	root	N/A	16.03 %
Thermoflexus hugenholtzii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → Thermoflexales → Thermoflexaceae → Thermoflexus → Thermoflexus hugenholtzii	0.76 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004081\|Ga0063454_101145626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	639	Open in IMG/M
3300004156\|Ga0062589_100640414	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300004463\|Ga0063356_101077909	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300004633\|Ga0066395_10275436	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300005093\|Ga0062594_100031899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2432	Open in IMG/M
3300005093\|Ga0062594_102707126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	549	Open in IMG/M
3300005167\|Ga0066672_10036908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2721	Open in IMG/M
3300005171\|Ga0066677_10042877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2227	Open in IMG/M
3300005174\|Ga0066680_10072047	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300005179\|Ga0066684_10187399	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300005179\|Ga0066684_10354077	All Organisms → cellular organisms → Bacteria → Terrabacteria group	982	Open in IMG/M
3300005184\|Ga0066671_10615324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	705	Open in IMG/M
3300005332\|Ga0066388_104987218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	675	Open in IMG/M
3300005436\|Ga0070713_101255964	Not Available	717	Open in IMG/M
3300005467\|Ga0070706_101238477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	685	Open in IMG/M
3300005529\|Ga0070741_11312189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	605	Open in IMG/M
3300005533\|Ga0070734_10105663	All Organisms → cellular organisms → Bacteria	1650	Open in IMG/M
3300005534\|Ga0070735_10347559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	890	Open in IMG/M
3300005537\|Ga0070730_10043681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3284	Open in IMG/M
3300005537\|Ga0070730_10155361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1549	Open in IMG/M
3300005542\|Ga0070732_10039251	All Organisms → cellular organisms → Bacteria	2716	Open in IMG/M
3300005542\|Ga0070732_10200982	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300005542\|Ga0070732_10465911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	764	Open in IMG/M
3300005559\|Ga0066700_10241653	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300005561\|Ga0066699_10716993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	712	Open in IMG/M
3300005618\|Ga0068864_100268770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1588	Open in IMG/M
3300005764\|Ga0066903_100015044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7818	Open in IMG/M
3300005764\|Ga0066903_100056579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → Thermoflexales → Thermoflexaceae → Thermoflexus → Thermoflexus hugenholtzii	4850	Open in IMG/M
3300005764\|Ga0066903_100086980	All Organisms → cellular organisms → Bacteria	4124	Open in IMG/M
3300005764\|Ga0066903_103731853	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300005764\|Ga0066903_106087228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	631	Open in IMG/M
3300006028\|Ga0070717_12029097	Not Available	518	Open in IMG/M
3300006800\|Ga0066660_10139423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1782	Open in IMG/M
3300006800\|Ga0066660_10287044	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300006854\|Ga0075425_100803095	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1078	Open in IMG/M
3300006914\|Ga0075436_100693611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	754	Open in IMG/M
3300009012\|Ga0066710_101486960	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300009012\|Ga0066710_102320656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	780	Open in IMG/M
3300009038\|Ga0099829_11185187	Not Available	633	Open in IMG/M
3300009088\|Ga0099830_10519843	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300009089\|Ga0099828_10986919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	751	Open in IMG/M
3300009090\|Ga0099827_10096272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2345	Open in IMG/M
3300009094\|Ga0111539_12484396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	601	Open in IMG/M
3300009100\|Ga0075418_12903181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300009137\|Ga0066709_102077514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	786	Open in IMG/M
3300009147\|Ga0114129_10030578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7619	Open in IMG/M
3300010037\|Ga0126304_10767981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	653	Open in IMG/M
3300010038\|Ga0126315_11186701	Not Available	518	Open in IMG/M
3300010040\|Ga0126308_10540974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	790	Open in IMG/M
3300010041\|Ga0126312_10993010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	614	Open in IMG/M
3300010047\|Ga0126382_11064415	Not Available	714	Open in IMG/M
3300010152\|Ga0126318_10705580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	604	Open in IMG/M
3300010152\|Ga0126318_10853945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	750	Open in IMG/M
3300010166\|Ga0126306_10361055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1130	Open in IMG/M
3300010333\|Ga0134080_10583068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	542	Open in IMG/M
3300010361\|Ga0126378_11230184	Not Available	846	Open in IMG/M
3300010362\|Ga0126377_10048450	All Organisms → cellular organisms → Bacteria	3692	Open in IMG/M
3300010366\|Ga0126379_12118974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	664	Open in IMG/M
3300010366\|Ga0126379_13375267	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300010396\|Ga0134126_11827649	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300010859\|Ga0126352_1222616	Not Available	663	Open in IMG/M
3300010872\|Ga0136897_10383983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	640	Open in IMG/M
3300011269\|Ga0137392_10129889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2018	Open in IMG/M
3300011270\|Ga0137391_10272958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1462	Open in IMG/M
3300012096\|Ga0137389_11667043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	534	Open in IMG/M
3300012201\|Ga0137365_10437407	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300012204\|Ga0137374_10011944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	10148	Open in IMG/M
3300012206\|Ga0137380_10420615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1185	Open in IMG/M
3300012207\|Ga0137381_11451130	Not Available	578	Open in IMG/M
3300012209\|Ga0137379_10163114	All Organisms → cellular organisms → Bacteria	2140	Open in IMG/M
3300012210\|Ga0137378_10062090	All Organisms → cellular organisms → Bacteria	3377	Open in IMG/M
3300012211\|Ga0137377_10440025	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300012212\|Ga0150985_116349456	Not Available	1119	Open in IMG/M
3300012212\|Ga0150985_119951062	Not Available	654	Open in IMG/M
3300012212\|Ga0150985_123139368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	661	Open in IMG/M
3300012350\|Ga0137372_10643277	Not Available	773	Open in IMG/M
3300012353\|Ga0137367_10532684	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300012357\|Ga0137384_11105843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	635	Open in IMG/M
3300012357\|Ga0137384_11443771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	537	Open in IMG/M
3300012469\|Ga0150984_110424040	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300012469\|Ga0150984_121945844	Not Available	792	Open in IMG/M
3300012685\|Ga0137397_10933608	Not Available	642	Open in IMG/M
3300012922\|Ga0137394_11222557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	615	Open in IMG/M
3300012971\|Ga0126369_11307087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	815	Open in IMG/M
3300013105\|Ga0157369_12199755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	559	Open in IMG/M
3300013764\|Ga0120111_1029248	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300013766\|Ga0120181_1059223	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300013772\|Ga0120158_10208777	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300014969\|Ga0157376_11712568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	664	Open in IMG/M
3300015371\|Ga0132258_10221529	All Organisms → cellular organisms → Bacteria	4603	Open in IMG/M
3300015371\|Ga0132258_12617563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1260	Open in IMG/M
3300015371\|Ga0132258_13099613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1149	Open in IMG/M
3300015371\|Ga0132258_13636214	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300015373\|Ga0132257_103428198	Not Available	577	Open in IMG/M
3300015374\|Ga0132255_101881202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	910	Open in IMG/M
3300018468\|Ga0066662_10986100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	833	Open in IMG/M
3300021307\|Ga0179585_1053959	Not Available	700	Open in IMG/M
3300021358\|Ga0213873_10113373	Not Available	790	Open in IMG/M
3300021358\|Ga0213873_10118281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	776	Open in IMG/M
3300021362\|Ga0213882_10017871	All Organisms → cellular organisms → Bacteria	2655	Open in IMG/M
3300021374\|Ga0213881_10162335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	981	Open in IMG/M
3300021377\|Ga0213874_10375052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	549	Open in IMG/M
3300021388\|Ga0213875_10389827	Not Available	664	Open in IMG/M
3300021388\|Ga0213875_10442704	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300021388\|Ga0213875_10451599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	615	Open in IMG/M
3300021953\|Ga0213880_10103323	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300021953\|Ga0213880_10236631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	522	Open in IMG/M
3300022467\|Ga0224712_10059752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1515	Open in IMG/M
3300025926\|Ga0207659_11024517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	710	Open in IMG/M
3300025928\|Ga0207700_11056746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	726	Open in IMG/M
3300025929\|Ga0207664_10411051	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300025930\|Ga0207701_10538360	Not Available	997	Open in IMG/M
3300026035\|Ga0207703_11793158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	590	Open in IMG/M
3300026317\|Ga0209154_1233562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	667	Open in IMG/M
3300026326\|Ga0209801_1029968	All Organisms → cellular organisms → Bacteria	2585	Open in IMG/M
3300026328\|Ga0209802_1116934	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1177	Open in IMG/M
3300026547\|Ga0209156_10242188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	841	Open in IMG/M
3300026552\|Ga0209577_10528434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	767	Open in IMG/M
3300027842\|Ga0209580_10060145	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300027842\|Ga0209580_10323255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	768	Open in IMG/M
3300027857\|Ga0209166_10014156	All Organisms → cellular organisms → Bacteria	5093	Open in IMG/M
3300027857\|Ga0209166_10056499	All Organisms → cellular organisms → Bacteria	2272	Open in IMG/M
3300027874\|Ga0209465_10660173	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	515	Open in IMG/M
3300031091\|Ga0308201_10153823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	723	Open in IMG/M
3300031472\|Ga0272437_1156630	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300031474\|Ga0170818_114342098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	522	Open in IMG/M
3300031520\|Ga0272428_1001200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	56831	Open in IMG/M
3300032261\|Ga0306920_102262692	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300033290\|Ga0318519_10692119	Not Available	623	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.63%
Host-Associated	Host-Associated	21.37%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.10%
Plants	Host-Associated → Plants	21.37%
Aquatic	Environmental → Aquatic	1.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.16%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	3.05%
Roots	Host-Associated → Plants → Roots	3.05%
Freshwater	Environmental → Aquatic → Freshwater	1.53%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	1.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.07%
Loam	Environmental → Terrestrial → Soil → Loam	11.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.87%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	3.05%
Unclassified	Host-Associated → Plants → Roots → Unclassified	3.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.29%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.29%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.53%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	1.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.05%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	3.05%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	3.05%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.29%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.53%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.53%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	1.53%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	9.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.34%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.58%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.05%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.05%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	3.05%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.29%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.29%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.29%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.53%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.53%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.76%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010872	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (version 5)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031472	Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak red sandstone	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063454_1011456262	3300004081	Soil	MSVPLFGCTWCGGAAEDEQSLRDHQEWCLGDAVANTRLLQDVAERDSELTQEALVKAAKLRKPKSSKR*
Ga0062589_1006404142	3300004156	Soil	VTGNPRPAWGCTWCGGAAEDEQSLLDHQQWCLGDPIANTQLLSEVAERDSGLTQEALVAAARKRRPASKTRRPKP*
Ga0063356_1010779091	3300004463	Arabidopsis Thaliana Rhizosphere	MTPPVWRCDWCGGGADDEQSLQDHQEWCLGDAWANTQLLNDVAEHTRGELTHEALVAAARKRRPPKQPC*
Ga0066395_102754361	3300004633	Tropical Forest Soil	MNDGTPAMWICAWCGGGAEDEQSLLDHQEWCLADPEANTRLLSDVAERDGELTQEALVATARKR
Ga0062594_1000318992	3300005093	Soil	MARPPFGCTWCGGAAEDEESLREHQEWCLGDAMANTLMLQEVAEREHELTHEALVKAARARRPKPSPKK*
Ga0062594_1027071262	3300005093	Soil	MSVPLFGCTWCGGAAEDEESLREHQEWCLGDATANTLMLQEVAERDRELTHDALVKAARQRRPKAGGKKQTQ*
Ga0066672_100369083	3300005167	Soil	MNSVTLVMWMCSWCGGGAEDEQSLLDHQEWCLADPEANTRLLSDVAERDGELTQEALVAAAKKRRLNASPPGRGRAKRG*
Ga0066677_100428773	3300005171	Soil	MNGGTLVMWMCSWCGGGAEDEQSLLDHQEWCLADPEANTRLLSDVAERDGELTQEALVAAAKKRRLNASPPGRGRAKRG*
Ga0066680_100720472	3300005174	Soil	MNGGTLVMWMCSWCGGGAEDEQSLLDHQEWCLADPEANTRLLSDVAERDGELTQEALVAAAKKRRLNASPSGRGRAKRG*
Ga0066684_101873992	3300005179	Soil	MKPPLWLCDWCGGGAEDEDSLRDHQEWCLADARLNTQLLDEVAARDGELSQEALVAAARKRRPHATKKPR*
Ga0066684_103540771	3300005179	Soil	MKPMFICTWCGGGAEDEDSLRDHQEWCLADPRANTQLLSEVAERDGELSQEALVAAAKKRRVTTRPPQ*
Ga0066671_106153242	3300005184	Soil	MSSPLFLCAWCGGGAEDEQSLRDHQEWCLADARANTQLLNDVAERDGELTQEALVAAAKKRRLAHKQRD*
Ga0066388_1049872182	3300005332	Tropical Forest Soil	MTALPRRPAWGCVWCGGAAEDEQSLLDHQEWCLGDALANTQLLEEVAARDSELTQEALVAAARKRRLASKGRPKG*
Ga0070713_1012559641	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKPALWMCTWCGGAAEDEDSLRDHQEWCLADARLNTELLNEVAARDGELSQEALVAAARKRRPHAGKKQS*
Ga0070706_1012384772	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MVESDLPAWVCTWCGGAAEDEESLLDHQEWCLGDAVSNTALLREVDERDGELTQEALVAEAQKRRASN*
Ga0070741_113121892	3300005529	Surface Soil	MKPALWLCAWCGGGAEDEQSLRDHQEWCLADARLNTLLLDEVAARDGELSQEALVAAAAKRRNR*
Ga0070734_101056633	3300005533	Surface Soil	MKPALWLCAWCGGGAEDEASLKDHQEWCLADPRANTQLLEDVARRDGELSQEALVAAARKRRQATGKERR*
Ga0070735_103475592	3300005534	Surface Soil	MSTMFICTWCGGGAEDEQALKDHQEWCLADPEANTRLLGDVAARDGELTQEALVAAARKRRPPQTRVKR*
Ga0070730_100436813	3300005537	Surface Soil	MKPALWMCAWCGGAAEDEDSLRDHQEWCLADARLNTELLDEIATRDGELSQEALVAAARKRRPQVGKKQT*
Ga0070730_101553612	3300005537	Surface Soil	VNPDDPDEPSWSCSWCGGAAEDEDSLLDHQEWCLGDAASNTRLLADVDARDGELTQEALVAEAKKRRAGA*
Ga0070732_100392511	3300005542	Surface Soil	VTLFMCSWCGGAAEDEDSLFDHQEWCLGDARANTLMLDEVAARFGELSQEELVAAARKRRSRDGAAKRRQD*
Ga0070732_102009821	3300005542	Surface Soil	MSSSALWLCTWCGGAAEDEDSLRDHQEWCLADARLNTELLNQVATRNGELSQDALVAAARKRRATLGKPRSK*
Ga0070732_104659112	3300005542	Surface Soil	MNQALWMCTWCGGAAEDEDSLRDHQEWCLADARLNTQLLDEVAARDGELSQKALVAAARKRRPHATKKPN*
Ga0066700_102416531	3300005559	Soil	MTDGTLVMWICALCGGGAEDEQALLDHQEWCLADPEANTRLLSDVAERDGELTQEALVAAAKKRRNVRAPQLKKEI
Ga0066699_107169932	3300005561	Soil	MSSPLFLCAWCGGGAEDEQSLRDHQEWCLADARANTQLLNDVAERDGELTQEALVAAAKKRRLAPKRQN*
Ga0068864_1002687703	3300005618	Switchgrass Rhizosphere	MTNPRPAWGCTWCGGAAEDEQSLLDHQQWCLGDPIANTQLLSEVAARESGLTQEALVAAARKRRPLPKPRRRKL*
Ga0066903_1000150443	3300005764	Tropical Forest Soil	MGYTRPPFGCTWCGGAAEDEQSLRDHQEWCLGDARANTQLLQEVAERDSELTQEALVAAAKKRRTWARKGRALGR*
Ga0066903_1000565792	3300005764	Tropical Forest Soil	MWICAWCRGGAEDEQSLVDHQQWCLGDGVANTQLLDEVARRDGELTQEALVAAARRRKSPPSP*
Ga0066903_1000869805	3300005764	Tropical Forest Soil	VKPALWLCAWCGGGAEDEDSLHDHQEWCLGDARLNTQLLEEVAERDGELSQEALVAAARKRRLAKRRP*
Ga0066903_1037318532	3300005764	Tropical Forest Soil	VKPALWLCAWCGGGAEDEQSLRDHQEWCLADAKLNTALLDEVAARDGELSQEALVAAARKRRPHVAKKRP*
Ga0066903_1060872282	3300005764	Tropical Forest Soil	RGPAVKPPLWLCAWCGGGAEDEESLRDHQEWCLSDARANTQLLEEVATRDGELSQEALVAAAARKRRLTSKRRR*
Ga0070717_120290972	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	CGGGAEDEDSLRDHQEWCLADPRANTQLLNDVAERDGELSQEALVAAAKKRRLAGKRGQ*
Ga0066660_101394233	3300006800	Soil	MNSVTLVMWMCSWCGGGAEDEQSLLDHQEWCLADPEANTRLLSDVAERDGELTQEALVAAAKKRRLNASPSGRGRAKRG*
Ga0066660_102870441	3300006800	Soil	MTDGTLVMWICALCGGGAEDEQALLDHQEWCLADPEANTRLLSDVAQRDGELTQEALVAAARKRRVAQVKKQI*
Ga0075425_1008030952	3300006854	Populus Rhizosphere	MNGTLVMWMCSWCGGGAEDEQSLLDHQEWCLADPEANTRLLSDVAERDGELTQEALVAAARKRRGGLRRSSAPKPRG*
Ga0075436_1006936112	3300006914	Populus Rhizosphere	MSAMFLCAWCGGGAEDEESLRDHQEWCLADPALNTSLLNEVAERDGELTQQALVAAAKKRRLAPKRPR*
Ga0066710_1014869602	3300009012	Grasslands Soil	LRSRTMSASGVPRPTWICTWCGGGADDELALLDHQEWCLADAVANTRLLNDVAERDGELTQEALVAAAKKRRRRPLTR
Ga0066710_1023206561	3300009012	Grasslands Soil	MATKPAWGCTWCGGAAEDEQSLRDHQEWCLGDALANTQLLEEVAARDSELTQEALVAAAKKRRLTPKKR
Ga0099829_111851872	3300009038	Vadose Zone Soil	MWICTWCGGGAEDEQSLLDHQEWCLGEAVANTRLLSEVAEREGELTQEALVAAAKKRRHAPKSPKTGSP*
Ga0099830_105198432	3300009088	Vadose Zone Soil	VWICPWCRGGAEDEQSLLDHQEWCLKDAIANTHLLSEVAERDGELTQEALVAAARKRRGR
Ga0099828_109869192	3300009089	Vadose Zone Soil	MWICSWCGGGAEDEQSLLDHQEWCLGEAVANTQLLSEVAEREGELTQEALVAAAKKRRHVQRGPQPP*
Ga0099827_100962724	3300009090	Vadose Zone Soil	MWICTWCGGGAEDEQSLLDHQEWCLGEAVANTQLLSEVAEREGELTQEALVAAAKKRRHIQRRPQPGTP*
Ga0111539_124843963	3300009094	Populus Rhizosphere	MSVPLFGCTWCGGAAEDEQSLRDHQEWCLGDAVANTRLLQDVAERDSELTQEALVKAVKLRRAKPSRR*
Ga0075418_129031811	3300009100	Populus Rhizosphere	MAAHSRPAWGCSWCGGAAEDEQSLLDHQEWCLGDAIANTQLLQEVAERNSELTQEALVKAARKRRL
Ga0066709_1020775141	3300009137	Grasslands Soil	SMWICSWCGGGAEDEQSLLDHQEWCLGEAVANTQLLSEVAEREGELTQEALVAAAKKRRHIPKGPQPGTP*
Ga0114129_100305783	3300009147	Populus Rhizosphere	MAAHSRPAWGCSWCGGAAEDEQSLLDHQEWCLGDAIANTQLLQEVAERNSELTQEALVKAARKRRLRTPPRG*
Ga0126304_107679811	3300010037	Serpentine Soil	MKKDLWRCTWCGGGADDEEALRDHQEWCLGDAWANTQLLNDVAQRSHGELTHEALVAAARKRRGAQS*
Ga0126315_111867011	3300010038	Serpentine Soil	ARPPWGCSWCGGAAEDEQSLRDHQEWCLRDPVLNTQLLADVAARESELTQEALVAAAKKRRMSPKGS*
Ga0126308_105409742	3300010040	Serpentine Soil	MWICSWCRGGAEDEQSLLDHQEWCLGDGMANTQLLNEVAERDGELTQEALVAAAKKRRTGR*
Ga0126312_109930101	3300010041	Serpentine Soil	MWMCAWCGGGAEDEQSLRDHREWCLGDGVANTELLEEVARRDGELTQEALVTAALNTFAL
Ga0126382_110644152	3300010047	Tropical Forest Soil	MTALPRRPAWGCVWCGGAAEDEQSLLDHQEWCLGDALANTQLLEEVAARESELTQEALVAAARKRRLASKGRPKG*
Ga0126318_107055802	3300010152	Soil	MTSSPLWLCAWCGGGAEDEQSLRDHQEWCLGDAALNTRLLDEVALRHHGELTQAALVAAARKRRLRDGAPKR*
Ga0126318_108539451	3300010152	Soil	MNSELWMCAWCGGGAEDEDSLRDHQQWCLGDARANTRMLDEIASRDGGLSQEALVAAARKRRAGKAQSPTRGR*
Ga0126306_103610552	3300010166	Serpentine Soil	MKKDLWRCTWCGGGAEDELALLDHQEWCLGDALANTRMLSEVAEKSDGELTQEALVEAARKRRPAGGSGDRSPKGR*
Ga0134080_105830681	3300010333	Grasslands Soil	RRRITLMGSPSRPPWGCTWCGGAAEDEQSLRDHQEWCLGDALLNTQLLEEVAAKDSELTQEALVAAARKRRART*
Ga0126378_112301842	3300010361	Tropical Forest Soil	GCVWCGGAAEDEQSLLDHQEWCLGDALANTQLLEEVAARDSELTQEALVAAARKRRLASKGRPKG*
Ga0126377_100484503	3300010362	Tropical Forest Soil	VKPPLWLCAWCGGGAEDEESLRDHQEWCLSDARANTQLLEEVATRDGELSQEALVAAAARKRRLTSKRRR*
Ga0126379_121189741	3300010366	Tropical Forest Soil	VSPKKHVGESPTIWICAWCRGGAEDEQSLVDHQEWCLGDGIANTQLLDEVARRDGELTQEALVAAAQRWKSSR*
Ga0126379_133752672	3300010366	Tropical Forest Soil	MSKTLWLCSWCGGAAEDEDALRDHQEWCLGDARLNTELLEEVAIRDGELSQDALVAAARKRRPQVRTRTSGNRST*
Ga0134126_118276492	3300010396	Terrestrial Soil	MKPALWLCVWCGGAAEDEDSLRDHQEWCLADARANTELLDEVVSRDGELSQEALVAAAARRRPAPRRHR*
Ga0126352_12226162	3300010859	Boreal Forest Soil	MWLCSWCGGGAEDEQSLLDHQEWCLGDGLANTQLLKEVAQREGELSQEALVAAAQRRRRA
Ga0136897_103839832	3300010872	Soil	MKQPQMTIWMCAWCGGGAEDEQSLLDHREWCLGDGQANTRLLYEVAQRDGELTHEALITAARKHRARG*
Ga0137392_101298893	3300011269	Vadose Zone Soil	VWICPWCRGGAEDEQSLLDHQEWCLKDAEANTQLLTEIAERDGELTQEALVAAARKRRGR
Ga0137391_102729582	3300011270	Vadose Zone Soil	MWICTWCGGGAEDEQSLLDHQEWCLGEAVANTRLLSEVAEREGELTQEALVAAAKKRRHAPKSPKTGTP*
Ga0137389_116670432	3300012096	Vadose Zone Soil	MVWNPVTYRDVTSMWICTWCGGGAEDEQSLLDHQEWCLGEAVANTQLLSEVAEREGELTQEALVAAAKKRRHVHKGPESGSA*
Ga0137365_104374072	3300012201	Vadose Zone Soil	MKPMFICVLCGGGAEDEESLRDHQAWCLADPRANTQLLNEVAERDGELSQEALVAAAKKRRVTTRRPR*
Ga0137374_1001194410	3300012204	Vadose Zone Soil	MGSSSRPPWGCTWCGGAAEDEQSLRDHQEWCLGDALLNTQLLEEVAAKDSELTQEALVAAARKRRART*
Ga0137374_102735933	3300012204	Vadose Zone Soil	MAAHSRPAWGCSWCGGAAEDEQSLLDHQEWCLGDAIANTQLLQEVAERDSELTQEAL
Ga0137380_104206153	3300012206	Vadose Zone Soil	MSTELFMCAWCGGGADDEQALLDHQEWCLADARANTQLLKDVAERDGELTQEALVAAAKKRRMTPKPHR*
Ga0137381_114511301	3300012207	Vadose Zone Soil	MSTELFMCAWCGGGADDEQALLDHQEWCLADARANTQLLNDVAERDGELTQEALVAAAKKRRMTPKPHR*
Ga0137379_101631142	3300012209	Vadose Zone Soil	MVESDLPAWVCTWCGGAAEDEESLLDHQEWCLGDAVSNTALLREVDERDGELTQEALVAEAEKRRASR*
Ga0137378_100620904	3300012210	Vadose Zone Soil	MSTELFMCAWCGGGADDEQALLDHQEWCLADARANTQLLSDVAERDGELTQEALVAAAKKRRMTPKPHR*
Ga0137377_104400252	3300012211	Vadose Zone Soil	MVESDLPAWVCTWCGGAAEDEESLLDHQEWCLGDAVSNTALLREVDERDGELTQEALVAEARKRRGSN*
Ga0150985_1163494562	3300012212	Avena Fatua Rhizosphere	MSVPLFGCTWCGGAAEDEQSLRDHQEWCLGDAVANTRLLQDVAERDSELTQEALVRAAKLRKPKSSKR*
Ga0150985_1199510622	3300012212	Avena Fatua Rhizosphere	SVMDTSRPPFGCTWCGGAAEDEQSLLDHQEWCLGDALLNTQLIQDIAARDSELTQEALVEAARKRRHTSGNGSAKR*
Ga0150985_1231393681	3300012212	Avena Fatua Rhizosphere	VRPERQLSAMNQALWLCAWCGGGAEDEQSLRDHQEWCLADPAANTALLNDVATRDGELSQQALVAAARKRRPPAAKRRS*
Ga0137372_106432772	3300012350	Vadose Zone Soil	MVWNPVTYRDVTSMWICTWCGGGAEDEQSLLDHQEWCLGEAVANTQLLSEVAEREGELTQEALVAAAKKRRHIQRRPQPGTP*
Ga0137367_105326842	3300012353	Vadose Zone Soil	MAAHSRPAWGCSWCGGAAEDEQSLLDHQEWCLGDAIANTQLLQEVAERDSELTQEALVKAARKRRLHTPPRN*
Ga0137384_111058432	3300012357	Vadose Zone Soil	MWICTWCGGGAEDEQSLLDHQEWCLGEAVANTQLLSEVAEREGELTQEALVAAAKKRRHVQRRPQPGTP*
Ga0137384_114437711	3300012357	Vadose Zone Soil	MSTELFMCAWCGGGADDEEALLDHQEWCLVDARANTQLLSDVAERDGELSQEALVAAAKKRRMTPKPHR*
Ga0150984_1104240402	3300012469	Avena Fatua Rhizosphere	MKPPLWLCARCGGGAEDEDSLRDHQEWCLSDARANTQLLEEVAQRDGGLSQEALVAAARKRRVAAKRRR*
Ga0150984_1219458442	3300012469	Avena Fatua Rhizosphere	MAAPLFGCTWCGGAAEDEQSLRDHQEWCLGDAAANTRLLQDVAERDSELTQEALVKAARKRRHVSGDRSTKR*
Ga0137397_109336082	3300012685	Vadose Zone Soil	MGANSRPAWGCTWCGGAAEDEQSLLDHQEWCLGDARANTQLLAEVAERDSELTQEALVKAARKRRHVSGDRSSKG*
Ga0137394_112225572	3300012922	Vadose Zone Soil	MGANSRPAWGCTWCGGAAEDEQSLLDHQEWCLGDALANTQLLAEVAERDSELTQEALVKAARKRRHVSGDRSSKG*
Ga0126369_113070871	3300012971	Tropical Forest Soil	VSPKKRVGESPTIWICAWCRGGAEDEQSLVDHQEWCLGDGIANTQLLDEVARRDGELTQEALVAAAQRWKSSR*
Ga0126369_117160371	3300012971	Tropical Forest Soil	MTALPRRPAWGCVWCGGAAEDEQSLLDHQEWCLGDALANTQLLEEVAARDSELTQEA
Ga0157369_121997552	3300013105	Corn Rhizosphere	MKPSLWLCAWCGGGAEDEDSLRDHQEWCLADARLNTQLLDEVAARDGELSQKALVAAAKKRRPHAAKKHS*
Ga0120111_10292481	3300013764	Permafrost	GGSEALPSGACTGCGGAAEDEESLLEHQEWCLGDAVSNTKMLSEVDQRDGELTQEALVEEAKKRRAVGN*
Ga0120181_10592232	3300013766	Permafrost	VGRGAGEGREGGAAEDEESLLEHQEWCLGDAVSNTKMLSEVDQRDGELTQEALVEEAKKRRAVGN*
Ga0120158_102087772	3300013772	Permafrost	VESEDLPSWACTWCGGAAEDEESLLEHQEWCLGDAVSNTKMLSEVDQRDGELTQEALVEEAKKRRAVGN*
Ga0157376_117125682	3300014969	Miscanthus Rhizosphere	MSVPLFGCSWCGGAAEDEESLRDHQEWCLGDAVANTRLLQDVAERDSELTQEALVKAAKLRR
Ga0132258_102215294	3300015371	Arabidopsis Rhizosphere	MARRPFGCTWCGGAAEDEESLREHQEWCLGDAMANTLMLQEVAEREHELTHEALVKAARARRPKPSPKK*
Ga0132258_126175632	3300015371	Arabidopsis Rhizosphere	VTRPAFGCAWCGGAAEDEQSLRDHQEWCLGDARLNTQLLEEVAARNAELTQEALVAAARKRRLTPRKQ*
Ga0132258_130996132	3300015371	Arabidopsis Rhizosphere	MNWPCPWCGGAAEDEDSLLDHQEWCLSDPVLNTQLLSEVAERDGELTQEALVAAARERRSGYGAPQG*
Ga0132258_136362141	3300015371	Arabidopsis Rhizosphere	MKPPLWLCAWCGGGAEDEDSLRDHQEWCLSDAQANTRLLEEVVQRDGELSQGALVAAARKRRVAAKRRR*
Ga0132257_1034281982	3300015373	Arabidopsis Rhizosphere	GVHSGLRPPFGCTWCGGAAEDEQSLIDHQEWCLGDALLNTQLIQEIAARDSELTQEALVAAAKKRRHTSGNGSAKR*
Ga0132255_1018812021	3300015374	Arabidopsis Rhizosphere	SGGLALMARPPFGCTWCGGAAEDEESLREHQEWCLGDAMANTLMLQEVAEREHELTHEALVKAARARRPKPSPKK*
Ga0066662_109861003	3300018468	Grasslands Soil	MTDGTLVMWICALCGGGAEDEQALLDHQEWCLADPEANTRLLSDVAERDGELTQEALVATAKKRRMTRTPQLKKKI
Ga0179585_10539591	3300021307	Vadose Zone Soil	LVMWMCSWCGGGAEDEQSLLDHQEWCLADPEANTRLLSDVAERDGELTQESLVAAAKKRRLNASPSGRGRAKRG
Ga0213873_101133731	3300021358	Rhizosphere	MKPPLWLCAWCGGAAEDEESLRDHQEWCLSDARANTQLLEEVVRRDGELSQKALVAAAARKRRHASKGHR
Ga0213873_101182811	3300021358	Rhizosphere	MAPAWTCAWCGGAAEDEDALLDHQEWCLGDARANTQLLNDVASRHQGELTQEALVAAAAKRRHHPEKSPRPRS
Ga0213882_100178714	3300021362	Exposed Rock	MKPPLWLCAWCGGAAEDEQSLRDHQEWCLRDARLNTELLDEVMLRTGEITQDALVAAARKRRGHAAKRRS
Ga0213881_101623351	3300021374	Exposed Rock	MARAWTCAWCGGAAEDEESLLDHQEWCLGDARANTQMLSEVAERQHGELTHEALVAAARRRRPIKAKPRVDC
Ga0213874_103750522	3300021377	Plant Roots	MNQPLWLCAWCGGAAEDEPSLRDHQEWCLADARLNTALLDEVARRDGELSQEALVAAAARKRKLAAKRSR
Ga0213875_103898271	3300021388	Plant Roots	GSAEDELGLLDHEQWCLGDGLANVQLLAEVAEREGELTQEALVAAARHKRAAPARRRPPARRPLR
Ga0213875_104427042	3300021388	Plant Roots	VKGELYVCAWCGGGAEDEESLRDHQEWCLADARANTALLNEVAERDGELSQEALVAAARERRQPRAS
Ga0213875_104515992	3300021388	Plant Roots	VRSTSKALWICAWCGGGAEDEQSLRDHQEWCLADARANTQLLNEVAEHAGEVTQAALVAASARKRRK
Ga0213880_101033232	3300021953	Exposed Rock	MTQQMWPCTWCGGAAEDEDSLRDHQQWCLGDARANTQLLDEVAAKFGELTQEELVAAARKRRSGDGATKRRQN
Ga0213880_102366311	3300021953	Exposed Rock	WLCTWCGGAAEDEDSLRDHQEWCLADARLNTELLDEVVARDGELSQEALVAAARKRRPHISRKRS
Ga0224712_100597522	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MKPALWLCVWCGGAAEDEDSLRDHQEWCLADARANTELLDEVVSRDGELSQEALVAAAARRRPAPRRHR
Ga0207659_110245171	3300025926	Miscanthus Rhizosphere	VPLFGCAWCGGAAEDEQSLRDHQEWCLGDADANTRMLQEVAERDSELTQEALVKAAKLRRPPAKPRKS
Ga0207700_110567462	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKPSLWMCAWCGGGAEDEDSLRDHQEWCLADARLNTQLLDEVAARDGELSQKALVAAAKKRRPHAAKKHS
Ga0207664_104110512	3300025929	Agricultural Soil	MKPSLWLCAWCGGGAEDEDSLRDHQEWCLADARLNTQLLDEVAARDGELSQKALVAAAKKRRPHAAKKHS
Ga0207701_105383602	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MSTPAFGCTWCGGAAEDEQSLRDHQEWCLGDAVANTQLLQDVAEHESELTQEALVAAARKRRPKPARN
Ga0207703_117931581	3300026035	Switchgrass Rhizosphere	MTNPRPAWGCTWCGGAAEDEQSLLDHQQWCLGDPIANTQLLSEVAARESGLTQEALVAAARKRRPLPKPRRRKL
Ga0209154_12335621	3300026317	Soil	MNSVTLVMWMCSWCGGGAEDEQSLLDHQEWCLADPEANTRLLSDVAERDGELTQEALVAAAKKRRLNASPPGRGRAKRG
Ga0209801_10299681	3300026326	Soil	MNGGTLVMWMCSWCGGGAEDEQSLLDHQEWCLADPEANTRLLSDVAERDGELTQEALVAAAKKRRLNASPPGRGRAKRG
Ga0209802_11169342	3300026328	Soil	MNGGTLVMWMCSWCGGGAEDEQSLLDHQEWCLADPEANTRLLSDVAERDGELTQEALVAAAKKRRLNASPSGRGRAKRG
Ga0209156_102421881	3300026547	Soil	MTDGTLVMWICALCGGGAEDEQALLDHQEWCLADPEANTRLLSDVAQRDGELTQEALVAAARKRRVAQVKKQI
Ga0209577_105284342	3300026552	Soil	MTDGTLVMWICALCGGGAEDEQALLDHQEWCLADPEANTRLLSDVAERDGELTQEALVAAAKKRR
Ga0209580_100601451	3300027842	Surface Soil	CSWCGGAAEDEDSLFDHQEWCLGDARANTLMLDEVAARFGELSQEELVAAARKRRSRDGAAKRRQD
Ga0209580_103232552	3300027842	Surface Soil	MNQALWMCTWCGGAAEDEDSLRDHQEWCLADARLNTQLLDEVAARDGELSQKALVAAARKRRPHATKKPN
Ga0209166_100141563	3300027857	Surface Soil	VEPEETDLQTWACTWCGGAAEDEESLLDHQEWCLGDARSNSRLIAEVGLRDGELTQEALVAEAKKRRERA
Ga0209166_100564992	3300027857	Surface Soil	MKPALWMCAWCGGAAEDEDSLRDHQEWCLADARLNTELLDEIATRDGELSQEALVAAARKRRPQVGKKQT
Ga0209465_106601731	3300027874	Tropical Forest Soil	VKPPLWLCAWCGGGAEDEESLRDHQEWCLSDARANTQLLEEVATRDGELSQEALVAAAARKRRLTSKRRR
Ga0308201_101538232	3300031091	Soil	MSSRDAPTIWLCAWCGGGAEDEQSLLDHQEWCLGEAVANTRLLKEVAERDGELTQEALVA
Ga0272437_11566302	3300031472	Rock	MASSTRAGGIARWACAWCGGEAGDELGLLDHQEWCLGDGQANVQLLAEVAEREGELTQEALVAAARQRRGA
Ga0170818_1143420982	3300031474	Forest Soil	MSQSLWLCAWCGGGAEDEQSLRDHQEWCLADAAANTALLDEVASRDGELSQEALVEAARKRRPTAKRRS
Ga0272428_100120039	3300031520	Rock	MASSTRAGGIARWACAWCGGEAGDELGLLDHQEWCLGDGQANVQLLAEVAEREGELTQEALVAAARQRRGK
Ga0306920_1022626922	3300032261	Soil	VKPALWLCAWCGGAAEDEQSLRDHQEWCLADAQLNTALLNEVAARDGELSQEALVEAARKRRPHVAKKRF
Ga0318519_106921191	3300033290	Soil	VKPALWLCAWCGGGAEDEQSLRDHQEWCLADAQLNTALLEEVAERDGELSQEALVEAARKRRPHVVKKHP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061687

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences