Metagenome / Metatranscriptome Family F061715

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061715
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	73 residues
Representative Sequence	MIPLIGSRCVYDPEVLMVMTNAFDRACDFLPAEFRDSDHMRRKLALHIIRQVDDGESDPARLADSAILSLLR
Number of Associated Samples	100
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	63.36 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	88.55 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.779 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.321 % of family members)
Environment Ontology (ENVO)	Unclassified (35.878 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.305 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.74.1.0: automated matches	d3mi9b1	3mi9	0.71121
a.69.2.1: Ypt/Rab-GAP domain of gyp1p	d2g77a1	2g77	0.69551
a.286.1.1: Sama2622-like	d2pv4a1	2pv4	0.69544
f.49.1.1: Proton glutamate symport protein	d7ahka1	7ahk	0.69426
a.74.1.1: Cyclin	d2i53a1	2i53	0.69196

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF09361	Phasin_2	9.92
PF06296	RelE	3.05
PF13467	RHH_4	3.05
PF04392	ABC_sub_bind	1.53
PF13763	DUF4167	1.53
PF03401	TctC	0.76
PF00072	Response_reg	0.76
PF00196	GerE	0.76
PF13426	PAS_9	0.76
PF03797	Autotransporter	0.76
PF00034	Cytochrom_C	0.76
PF08281	Sigma70_r4_2	0.76
PF01041	DegT_DnrJ_EryC1	0.76
PF13586	DDE_Tnp_1_2	0.76
PF06042	NTP_transf_6	0.76
PF04226	Transgly_assoc	0.76
PF01183	Glyco_hydro_25	0.76
PF02517	Rce1-like	0.76
PF02518	HATPase_c	0.76
PF02894	GFO_IDH_MocA_C	0.76
PF00216	Bac_DNA_binding	0.76
PF03466	LysR_substrate	0.76
PF12244	DUF3606	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG4737	Uncharacterized conserved protein	Function unknown [S]	3.05
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.53
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.76
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.76
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.76
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.76
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.76
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.76
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.76
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.76
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.76
COG3575	Uncharacterized conserved protein	Function unknown [S]	0.76
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	0.76
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.78 %
All Organisms	root	All Organisms	41.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.78 %
cellular organisms	root	All Organisms → cellular organisms	41.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.77 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.78 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	12.21 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.76 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.69 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	3.05 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.05 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.53 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.05 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	3.05 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.53 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.69 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	3.05 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.53 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.76 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.76 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.69 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	3.05 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.53 %
Bradyrhizobium sp. 2S1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2S1	0.76 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.76 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10090030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10094411	Not Available	740	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1039902	Not Available	851	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1015672	Not Available	1064	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1032737	Not Available	729	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1036603	Not Available	690	Open in IMG/M
3300000956\|JGI10216J12902_103014672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3435	Open in IMG/M
3300005167\|Ga0066672_10132285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1551	Open in IMG/M
3300005167\|Ga0066672_10500449	Not Available	789	Open in IMG/M
3300005176\|Ga0066679_10743894	Not Available	631	Open in IMG/M
3300005180\|Ga0066685_10945006	Not Available	573	Open in IMG/M
3300005181\|Ga0066678_10869262	Not Available	592	Open in IMG/M
3300005332\|Ga0066388_100110208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3245	Open in IMG/M
3300005332\|Ga0066388_100309122	All Organisms → cellular organisms → Bacteria → Proteobacteria	2226	Open in IMG/M
3300005332\|Ga0066388_100698934	All Organisms → cellular organisms → Bacteria	1621	Open in IMG/M
3300005332\|Ga0066388_106881649	Not Available	572	Open in IMG/M
3300005560\|Ga0066670_10044408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2266	Open in IMG/M
3300005569\|Ga0066705_10681570	Not Available	621	Open in IMG/M
3300005575\|Ga0066702_10117062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1543	Open in IMG/M
3300005713\|Ga0066905_100129112	Not Available	1780	Open in IMG/M
3300005764\|Ga0066903_101049306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2S1	1496	Open in IMG/M
3300005764\|Ga0066903_101309262	All Organisms → cellular organisms → Bacteria → Proteobacteria	1354	Open in IMG/M
3300005764\|Ga0066903_102175151	Not Available	1069	Open in IMG/M
3300005764\|Ga0066903_102461586	Not Available	1007	Open in IMG/M
3300005764\|Ga0066903_103520662	Not Available	844	Open in IMG/M
3300005764\|Ga0066903_107475228	Not Available	564	Open in IMG/M
3300005764\|Ga0066903_108754362	Not Available	514	Open in IMG/M
3300006034\|Ga0066656_10136182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1525	Open in IMG/M
3300006794\|Ga0066658_10389401	Not Available	753	Open in IMG/M
3300009012\|Ga0066710_100346376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2195	Open in IMG/M
3300009012\|Ga0066710_101544635	Not Available	1021	Open in IMG/M
3300009038\|Ga0099829_11645840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300009100\|Ga0075418_11622625	Not Available	702	Open in IMG/M
3300009137\|Ga0066709_103656391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	558	Open in IMG/M
3300009789\|Ga0126307_11599828	Not Available	529	Open in IMG/M
3300009792\|Ga0126374_10201851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1258	Open in IMG/M
3300010037\|Ga0126304_10367885	Not Available	958	Open in IMG/M
3300010038\|Ga0126315_10203711	Not Available	1193	Open in IMG/M
3300010043\|Ga0126380_10189095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1366	Open in IMG/M
3300010166\|Ga0126306_10795464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	763	Open in IMG/M
3300010359\|Ga0126376_10166337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1787	Open in IMG/M
3300010360\|Ga0126372_10713716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	981	Open in IMG/M
3300010361\|Ga0126378_13275708	Not Available	515	Open in IMG/M
3300010362\|Ga0126377_10619090	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1129	Open in IMG/M
3300010366\|Ga0126379_10574474	Not Available	1210	Open in IMG/M
3300010366\|Ga0126379_13606584	Not Available	518	Open in IMG/M
3300010376\|Ga0126381_101176266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1108	Open in IMG/M
3300010398\|Ga0126383_12567222	Not Available	593	Open in IMG/M
3300011269\|Ga0137392_10958502	Not Available	703	Open in IMG/M
3300011270\|Ga0137391_10239127	Not Available	1576	Open in IMG/M
3300012096\|Ga0137389_11628203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300012189\|Ga0137388_11596544	Not Available	588	Open in IMG/M
3300012199\|Ga0137383_11353365	Not Available	505	Open in IMG/M
3300012201\|Ga0137365_10913241	Not Available	640	Open in IMG/M
3300012204\|Ga0137374_10051111	All Organisms → cellular organisms → Bacteria → Proteobacteria	4256	Open in IMG/M
3300012204\|Ga0137374_10325315	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300012204\|Ga0137374_10484501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	964	Open in IMG/M
3300012204\|Ga0137374_10838263	Not Available	679	Open in IMG/M
3300012205\|Ga0137362_11066307	Not Available	687	Open in IMG/M
3300012207\|Ga0137381_11356899	Not Available	603	Open in IMG/M
3300012353\|Ga0137367_10216597	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300012354\|Ga0137366_10640690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	760	Open in IMG/M
3300012355\|Ga0137369_10279273	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300012355\|Ga0137369_10815359	Not Available	635	Open in IMG/M
3300012355\|Ga0137369_11149762	Not Available	504	Open in IMG/M
3300012356\|Ga0137371_10309612	Not Available	1229	Open in IMG/M
3300012356\|Ga0137371_10441860	Not Available	1007	Open in IMG/M
3300012360\|Ga0137375_10241584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1675	Open in IMG/M
3300012361\|Ga0137360_10399927	Not Available	1157	Open in IMG/M
3300012362\|Ga0137361_11638730	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300012372\|Ga0134037_1095707	Not Available	528	Open in IMG/M
3300012929\|Ga0137404_11527799	Not Available	618	Open in IMG/M
3300012948\|Ga0126375_10042995	Not Available	2349	Open in IMG/M
3300012971\|Ga0126369_13534916	Not Available	512	Open in IMG/M
3300015358\|Ga0134089_10415866	Not Available	577	Open in IMG/M
3300015371\|Ga0132258_12038274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1443	Open in IMG/M
3300016294\|Ga0182041_10167906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1714	Open in IMG/M
3300016319\|Ga0182033_10356509	Not Available	1225	Open in IMG/M
3300016341\|Ga0182035_11358449	Not Available	637	Open in IMG/M
3300016357\|Ga0182032_10189900	Not Available	1555	Open in IMG/M
3300016357\|Ga0182032_11556742	Not Available	575	Open in IMG/M
3300016371\|Ga0182034_11768865	Not Available	544	Open in IMG/M
3300016387\|Ga0182040_10241733	Not Available	1351	Open in IMG/M
3300016387\|Ga0182040_10242853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1349	Open in IMG/M
3300016404\|Ga0182037_10159357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1710	Open in IMG/M
3300016404\|Ga0182037_11763692	Not Available	552	Open in IMG/M
3300016445\|Ga0182038_10080329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2300	Open in IMG/M
3300018433\|Ga0066667_11837454	Not Available	550	Open in IMG/M
3300018468\|Ga0066662_11725889	Not Available	655	Open in IMG/M
3300021560\|Ga0126371_11871357	Not Available	720	Open in IMG/M
3300026322\|Ga0209687_1222643	Not Available	581	Open in IMG/M
3300027383\|Ga0209213_1004692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	2373	Open in IMG/M
3300027511\|Ga0209843_1051796	All Organisms → cellular organisms → Bacteria → Proteobacteria	724	Open in IMG/M
3300027546\|Ga0208984_1148552	Not Available	501	Open in IMG/M
3300031543\|Ga0318516_10167737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1263	Open in IMG/M
3300031544\|Ga0318534_10394813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	795	Open in IMG/M
3300031545\|Ga0318541_10039963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2369	Open in IMG/M
3300031545\|Ga0318541_10737237	Not Available	550	Open in IMG/M
3300031573\|Ga0310915_10608557	Not Available	774	Open in IMG/M
3300031668\|Ga0318542_10150326	All Organisms → cellular organisms → Bacteria → Proteobacteria	1157	Open in IMG/M
3300031668\|Ga0318542_10645702	Not Available	553	Open in IMG/M
3300031680\|Ga0318574_10041553	All Organisms → cellular organisms → Bacteria → Proteobacteria	2381	Open in IMG/M
3300031719\|Ga0306917_11168827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300031744\|Ga0306918_10188604	Not Available	1548	Open in IMG/M
3300031764\|Ga0318535_10122420	Not Available	1150	Open in IMG/M
3300031764\|Ga0318535_10487507	Not Available	548	Open in IMG/M
3300031771\|Ga0318546_10075752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	2160	Open in IMG/M
3300031797\|Ga0318550_10369050	Not Available	695	Open in IMG/M
3300031805\|Ga0318497_10684664	Not Available	575	Open in IMG/M
3300031820\|Ga0307473_10004466	All Organisms → cellular organisms → Bacteria → Proteobacteria	4384	Open in IMG/M
3300031833\|Ga0310917_10573990	Not Available	766	Open in IMG/M
3300031845\|Ga0318511_10417551	Not Available	616	Open in IMG/M
3300031860\|Ga0318495_10501354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	530	Open in IMG/M
3300031879\|Ga0306919_10230624	Not Available	1387	Open in IMG/M
3300031879\|Ga0306919_10323978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1173	Open in IMG/M
3300031890\|Ga0306925_10580486	Not Available	1186	Open in IMG/M
3300031890\|Ga0306925_10870414	Not Available	929	Open in IMG/M
3300031910\|Ga0306923_10320770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1769	Open in IMG/M
3300031910\|Ga0306923_11208986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300031912\|Ga0306921_10230733	Not Available	2169	Open in IMG/M
3300031912\|Ga0306921_11180861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	853	Open in IMG/M
3300031945\|Ga0310913_11003051	Not Available	585	Open in IMG/M
3300031946\|Ga0310910_10046265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	3046	Open in IMG/M
3300032001\|Ga0306922_11126223	Not Available	803	Open in IMG/M
3300032025\|Ga0318507_10066039	All Organisms → cellular organisms → Bacteria → Proteobacteria	1458	Open in IMG/M
3300032035\|Ga0310911_10230077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1059	Open in IMG/M
3300032043\|Ga0318556_10604265	Not Available	572	Open in IMG/M
3300032044\|Ga0318558_10080621	All Organisms → cellular organisms → Bacteria → Proteobacteria	1497	Open in IMG/M
3300032091\|Ga0318577_10165937	Not Available	1053	Open in IMG/M
3300032261\|Ga0306920_100860544	Not Available	1328	Open in IMG/M
3300033290\|Ga0318519_10584725	Not Available	677	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.47%
Host-Associated	Host-Associated	1.53%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.47%
Plants	Host-Associated → Plants	1.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.02%
Loam	Environmental → Terrestrial → Soil → Loam	10.69%
Sand	Environmental → Terrestrial → Soil → Sand	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.69%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.58%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.82%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100900303	3300000597	Forest Soil	EVLMVMTNAFDRACDFLPAEFRDSDHMRRKLALHIVHQVDDGESDPARLADSAILSLLR*
AF_2010_repII_A1DRAFT_100944112	3300000597	Forest Soil	MIPLIGSRCVYDPDVLMVMTNAFDRACDFLPAEFRDSDHMRRKLALHIIHQVDDGESDPARLADSAILSLQR*
AF_2010_repII_A100DRAFT_10399022	3300000655	Forest Soil	MTPLISSRCVYDPEVLMVMTNAFDRACDFLPAEFRDSDHMRRKLALHIVHQVDDGESDPARLADSAILSLLR*
AP72_2010_repI_A100DRAFT_10156722	3300000837	Forest Soil	MISLIGGRCVYDPQVLMVMTNAFDRACDFLPAQFRDNDHMRRKLALHILHQVDDGESDPARLADSAILSLLR*
AP72_2010_repI_A100DRAFT_10327372	3300000837	Forest Soil	MTPLISSRCVYDPEVLMVMTNAFDRACDFLPAEFRDSDHMRRKLALHIFHQVDDGESDPARLADSAILSLLR*
AP72_2010_repI_A100DRAFT_10366031	3300000837	Forest Soil	MVPLIGSRCVYDPEVLIVMTNAFDRACDFLPAEFRDSDHMRRKLALHIIRQVDDGESDTARLADSAILSLLRWPIRGARKRKLG*
JGI10216J12902_1030146721	3300000956	Soil	MIPSISSRCTYDPEIVKIMSKAFDRACEALPVQFKDSDRVRRKLALLIIHQIDEGESDPTRLADAAVLSLHW*
Ga0066672_101322851	3300005167	Soil	MMPLIGGRCVYDREVLMVMSNAFDRACDFLPAQFRESDHMRRKLALHIIHQVDDGESNPARLAGSAIFSLLG*
Ga0066672_105004492	3300005167	Soil	MIPLIGTRCVYDPETLTIMSSAFDRACGCLPHEFRNSAPTRRKLALHIIHRVDDGESDPTRLADSAILSLVR*
Ga0066679_107438942	3300005176	Soil	MPLIGGRCVYDPEVLMVMTKAFDRACDFLPAQFRESDHMRRKLALHIIHQVDDGESDPARLAGSAIFSLLG*
Ga0066685_109450061	3300005180	Soil	MMPLIGGRCVYDPEVLMVMTKAFDRACDFLPAQFRESDHMRRKLALHIIHQVDDGESDPARLAGSAIFSLLG*
Ga0066678_108692622	3300005181	Soil	MMPLIGGRCVYDSEVLMVMTNAFDRACDFLPAQFRESDHMRRKLALHIIHQVDDGESDPARLAGSAIFSLLG*
Ga0066388_1001102082	3300005332	Tropical Forest Soil	MIPLVGSRCVYDPEVLMVMVNAFNRACDFLPAQFKNSDRMRKKLALHIIHQVDDGECDPARLADSAILSVLQ*
Ga0066388_1003091223	3300005332	Tropical Forest Soil	MTPASGIRRIYDPDTLSIMGDAFDRACDFLPIKFRDSDRMRRKLALHIIRQVDEGESDPTRLADSAILSILR*
Ga0066388_1006989342	3300005332	Tropical Forest Soil	MVPLIGSRCVYDPEVLIVMTNAFDRACDFLPAEFRDSDHMRRKLALHIIRQVDDGESDPARLADSAILSLLRWPIRGARKRKLG*
Ga0066388_1068816491	3300005332	Tropical Forest Soil	EMTPLISSRCVYDPEVLMVMTNAFDRACDFLPAEFRDSDRMRRKLALHIFHQVDVGESDPARLADSAISSLLR*
Ga0066670_100444086	3300005560	Soil	MMPLIGGRCVYDPEVLMVMTNAFDRACDFLPAQFRESDHMRRKLALHIIHQVDDGESNPARLAGSAIFSLLG*
Ga0066705_106815701	3300005569	Soil	MPLIGGRCVYDPEVLMVMTNAFDRACDFLPAQFRESDHMRRKLALHIIHQVDDGESDPARLAGSAIFSLLG*
Ga0066702_101170621	3300005575	Soil	MMPLIGGRCVYDPEVLMVMTNAFDRACDFLPAQFRESDHMRRKLALHIIHQVDDGESDPARLAGSAIFSLLG*
Ga0066905_1001291122	3300005713	Tropical Forest Soil	MIPLIGSRCVYDPEVLMVMTNAFDRACDFLPAEFRDSDHMRRKLALHIIHQVDDGESDPARLADSAILSLQR*
Ga0066903_1010493062	3300005764	Tropical Forest Soil	MGSEMIPLVGSRCVYDPEVLMVMVNAFNRACDFLPAQFKNSDRMRKKLALHIIHQVDDGECDPARLADSAILSVLQ*
Ga0066903_1013092622	3300005764	Tropical Forest Soil	MIPSIGTRCVYDPATLRIMTSAFDRACDLLPVEFRKSDHMRKKVALHIIRRIDDGESDPTRLADSAVLSLVQ*
Ga0066903_1021751511	3300005764	Tropical Forest Soil	MTPLIGSRCVYDPEVLRVMTNAFDRACDFLPAEFRDSDHMRRKLALHIIRQVDDGESDPARLADSAIL
Ga0066903_1024615862	3300005764	Tropical Forest Soil	MTPLISSRCVYDPEVLMVMTNAFDRAGDFLPAEFRDSAHMRRKLALHIFHQVDVGESDPARLADSAISSLLR*
Ga0066903_1035206622	3300005764	Tropical Forest Soil	MIPLVGTRCVYDPATLTIMTDAFDRACVCLPLEFKDSAQLRRKLALHIIRHFDDGESDPTRLADSAVLSLAR*
Ga0066903_1074752281	3300005764	Tropical Forest Soil	MIPSIGTRCVYDPATLTIMTSAFDRACDLLPVEFRKSDHMRKKVAMYIIRRIDEGESDPTRLADSAVLSLVQ*
Ga0066903_1087543621	3300005764	Tropical Forest Soil	MLPSIGIRCVYDPETLIVMGNAFDRACDFLSDQFKDSDHMRKRLALHIIRHINDGESDPTRL
Ga0066656_101361824	3300006034	Soil	MMPLIGGRCVVYDPEVLMVMTNAFDRACDFLPAQFRESDHMRRKLALHIIHQVDDGESNPARLAGSAIFSLLG*
Ga0066658_103894011	3300006794	Soil	MMPLIGGRCVYDPEVLMVMTKAFDRACDFLPAQFRESDHMRRKLALRIIHQVDDGESDPARLAGSAIFSLVG*
Ga0066710_1003463765	3300009012	Grasslands Soil	MMPLIGGRCVYDPEVLMVMTNAFDRACDFLPAQFRESDHMRRKLALHIIHQVDDGESNPARLAGSAIFSLLG
Ga0066710_1015446353	3300009012	Grasslands Soil	MIPLIGTRCVYDPETLTIMSSAFDRACGCLPHEFRNSAPTRRKLALHIIHRVDDGESDPTRLADSAILSLVR
Ga0099829_116458402	3300009038	Vadose Zone Soil	STGLRCVYDPDILSIMTNALDRACETLPFQFRDSEHMRRKLALHIIRQVNDGESDPARLADSAILSILWRSRS*
Ga0075418_116226252	3300009100	Populus Rhizosphere	MTPSSGIRHVYDPESLRIMSSALDHACDFLPAQFRGSDHMRRKLALHIIRQVNEGEIDQTRLAYSAILSVLR*
Ga0066709_1036563912	3300009137	Grasslands Soil	MMPLIGGRCVYDPEVLMVMTKAFDRACDFLPAQFRESDHMRRKLALHIIHQVDDGESNPARLAGSAIFSLLG*
Ga0126307_115998281	3300009789	Serpentine Soil	IRPVYDPGTLRIMTDAFDNACNFLPVQFRNSNCMRRKLALHIIRDLNEGESDSTRLADSAVLSVLGYVNRRDTGP*
Ga0126374_102018511	3300009792	Tropical Forest Soil	MIPSSGIRHAYDPDSLRIMTNAFDRACDFLPAQFRDDGRMRRKLAMHIIRQVNDGEIDPTRLADSAIISVLR*
Ga0126304_103678852	3300010037	Serpentine Soil	VRASSGIRPVYDPGTLRIMTDAFDNACNFLPVQFRNSNCMRRKLALHIIRDLNEGESDSTRLADSAVLSVLGYVNRRDTGP*
Ga0126315_102037111	3300010038	Serpentine Soil	MTPSKGIRPVYDPHTLRIMTSAFDRACNFLPIQFRESDRMRRKLALRIIRHLDDGESDPTRLADSAVLFVIR*
Ga0126380_101890951	3300010043	Tropical Forest Soil	LATALEEWENEMTPLISSRCVYDPEVLMVMTNAFDRACDFLPAEFRDSDHMRRKLALHIFHQVDVGESDPARLADSAI
Ga0126306_107954641	3300010166	Serpentine Soil	SVMASAFDGAYDFLRTRFGDNDHMRRKLALHIIREVDSGESDPRHLADSAILSVLNISTRRG*
Ga0126376_101663373	3300010359	Tropical Forest Soil	MTPLISGRCVYDPEVLMVMTNAFDRACDFLPAAFRDSDHMRRKLALHIFHQVDVGESDPAHLADSAILSLLR*
Ga0126372_107137162	3300010360	Tropical Forest Soil	CVYDPEVLMVMTNAFDRACDFLPAEFRDSDHMRRKLALHIFHQVDDGESDPARLADSAILVLR*
Ga0126378_132757081	3300010361	Tropical Forest Soil	MIPSIGGRCVYHPEVLMVMTNAFDRACEFLPAQFKDSEQMRRRLALQIIHQVDDGESDPARLAHSAILSFVWNQ*
Ga0126377_106190902	3300010362	Tropical Forest Soil	MIPSNGIRHAYDPDSLRIMTNAFDRACDFLPAQFRDDGRMRRKLAMHIIRQVNNGEIDPTRLADSAIISVLR*
Ga0126379_105744742	3300010366	Tropical Forest Soil	MTPLISGRCVYDPEVLMVMTNAFDRACDFLPAAFRDSDHMRRKLALHIFHQVDVGESDPARLADSAILSLLR*
Ga0126379_136065842	3300010366	Tropical Forest Soil	VYHPEVLMVMTNAFDRACEFLPAQFKDSEQMRRRLALQIIHQVDDGESDPARLAHSAILSFVWNQ*
Ga0126381_1011762661	3300010376	Tropical Forest Soil	MTPLISGRCVYDPEVLMVMTNAFDRACDFLPAEFRDSDHMRRKLALHIIRQVDDGESDPARLADSAILSLLR*
Ga0126383_125672221	3300010398	Tropical Forest Soil	SIGTRCVYDPATLTIMTSAFDRACDLLPVEFRKSDHMRKKVALHIIRRIDDGESDPRRLADSAVLSLVQ*
Ga0137392_109585022	3300011269	Vadose Zone Soil	MTPSSGIGCVYDPETLTMMTHAFDRACNFLPTQFRDSDYMRRKLALHIIHEVDDGENDPTRLAASAIFSVL*
Ga0137391_102391271	3300011270	Vadose Zone Soil	MTLSSGIGCVYDPETLTMMTHAFDRACNFLPTQFRDSDYMRRKLALHIIHEVDDGENDPTRLAASAIFSVL*
Ga0137389_116282031	3300012096	Vadose Zone Soil	MTPSSGTRPVYDPDTLRIMTDAFDRACDFLPVQFRNSDRMRRKLALHIIRHVDDGECDPTRLADSAILLALR*
Ga0137388_115965441	3300012189	Vadose Zone Soil	MTTPSGIRHVYDPDTLSIMTNAFDRACDFLPVQFRDSDHMRRKLALHIIRHVNDGESDPTHLADSAVLFVLR*
Ga0137383_113533651	3300012199	Vadose Zone Soil	MTTPSGIRHVYDPDTLSIMTNAFDRACDFLPVQFRDSDHIRRKLALHIIRHVNDGESDPTHLADSAILFVLR*
Ga0137365_109132412	3300012201	Vadose Zone Soil	MTTPSGIRHVYDPDTLSIMTNAFDRACDFLPVQFRDSDHMRRKLALHIIRHVNDGESDPTHLADSAILFVLR*
Ga0137374_100511111	3300012204	Vadose Zone Soil	LSAIDVFFGRLGVHGREGEMTPSSGTRPVYDPDTLRIMTDAFDRACDFLPVQFKNSDRMRRKLALHIIRHVDDGESDPTRLADSAILLALR*
Ga0137374_103253153	3300012204	Vadose Zone Soil	MTTSSGIKYVYDPDTLSIMTDAFDRACDFLPVQFRDSDHMRRKLASHIIRHVNDGESDPTRLAEAAILFVLR*
Ga0137374_104845011	3300012204	Vadose Zone Soil	PCVYDPDMLSIMSDAFDRACDFLRVQFRDSDHIRRKLALHIIREVNDGESDPARLAESAILSVLW*
Ga0137374_108382631	3300012204	Vadose Zone Soil	SSGIRRFYDPDTLSIMTNAFDRACDSVPVQFRNSDRMRRKLALHIIRHINDGETDATRLADSAVLSVLW*
Ga0137362_110663071	3300012205	Vadose Zone Soil	HGLEKWEDEMVPLIGSRCVYYPEVLMVMTKAFDRACDFLPSEFRDSDHMRRKLALHIIRQVDDGESDPARLADSAILSLLR*
Ga0137381_113568992	3300012207	Vadose Zone Soil	MIPWIGCRCVYDPETLAIMTNAFDRACDFLPAQLRDRDPVRRKLALHIIRQVDDGESDPTRLADAAILSLLR*
Ga0137367_102165972	3300012353	Vadose Zone Soil	IRRFYDPDTLSIMTNAFDRACDSVPVQFRNSDRMRRKLALHIIRHINDGETDATRLADSAVLSVLW*
Ga0137366_106406902	3300012354	Vadose Zone Soil	MIPWIGGRCVYDPETLAIMTNAFDRACDFLPAQLRDRDPVRRKLALHIIRQVDDGESDPTRLADAAILSLLR*
Ga0137369_102792733	3300012355	Vadose Zone Soil	MTTSSGIKYVYDPDTLSIMTDAFDRAGDFLPVQFRDSDHMRRKLASHIIRHVNDGESDATRLAESAILFVLR*
Ga0137369_108153591	3300012355	Vadose Zone Soil	MTPSSGTRPVYDPDTLRIMTDAFDRACDFLPVQFKNSDRMRRKLALHIIRHVDDGESDPTRLADSAILLALR*
Ga0137369_111497621	3300012355	Vadose Zone Soil	MTPSSGIRHVYDPDTLGIMTNAFDRACDSVPVQFRNSDRMRRKLALHIIRHINDGETDATRLADSAVLSVLW*
Ga0137371_103096122	3300012356	Vadose Zone Soil	MIPWIGGRCVYDPETLAIMTNAFDRACDFLPAQIRDRDPMRRKLALHIIRQVDDGESDPTRLADAAILSLLR*
Ga0137371_104418601	3300012356	Vadose Zone Soil	DTLSIMINAFDRACDFLPVQFRDSDHMRRKLALHIIRHVNDGESDPTHLADSAILFVLR*
Ga0137375_102415844	3300012360	Vadose Zone Soil	MTTSSGIKYVYDPDTLSIMTDAFDRACDFLPVQFRDSDHMRRKLASHIIRHVNDGESDPTRLAESAILFVLR*
Ga0137360_103999273	3300012361	Vadose Zone Soil	LSITGIRFGHGLEKWEDEMVPLIGSRCVYYPEVLMVMTKAFDRACDFLPSEFRDSDHMRRKLALHIIRQVDDGESDPARLADSAILSLLR*
Ga0137361_116387302	3300012362	Vadose Zone Soil	MTPSSGTRPVYDPDTLRIMTDAFDRACDFLPVQFKNSDRMRRKLALHIIRHVDDGESDPTRLADSAILLA
Ga0134037_10957071	3300012372	Grasslands Soil	MMPLIGGRCVYDPEVLMVMTNAFDRACDFLPAQFRKSDHMRRKLALHIIHQVDDGESNPARLAGSAIFSLLG*
Ga0137404_115277991	3300012929	Vadose Zone Soil	MTPSSGIRHVYDPDTLGIMTNAFDRACDFLPVQFRDSDGVRRKLALHIIRHVDDGESDPTCLAESAVLSVFR*
Ga0126375_100429953	3300012948	Tropical Forest Soil	MIPSNGIRHAYDPDSLRIMTNAFDRACDFLPAQFRDDGRMRRKLAMHIIRQVNDGEIDPTRLADSAIISVLR*
Ga0126369_135349161	3300012971	Tropical Forest Soil	MLPSIGIRCVYDPETLIVMGNAFDRACDFLSDQFKDSDHMRKRLALHIIRHINDGESDPTRLADSAILSLLR*
Ga0134089_104158661	3300015358	Grasslands Soil	MIPSIGGRCVYDPETLAIMTSAFDRACDFLPAQLRDRDPVRRKLALHIIRQVDDGETDPTRLADAAILSLLR*
Ga0132258_120382742	3300015371	Arabidopsis Rhizosphere	MTPSSGIRHVYDPDTLAIMTNAFDRACDFLPVQFRDSDGVRRKLALHIIRHVDDGESDPTCLSESAVLSVFR*
Ga0182041_101679062	3300016294	Soil	MIPLIGSRCVYDPEVLMVMTDAFDRACDFLPAEFRDSDRMPRKLALHIIRQVDDGESDRARLADSAILSLLR
Ga0182033_103565091	3300016319	Soil	RMSGEMTSLDGFRHVYDPETLSVVTNAFDRACDFFPVQFRGNDYLRKKLAMHIIHKVDDGESDPTRLADSAVLSLLWLKR
Ga0182035_113584491	3300016341	Soil	PSSRMRGVYDPDTLTMMTHAFDRACAFLPTQLNSDYMRSKLALHIIRQVDDGESDPTRLVNSAILSLLWKAA
Ga0182032_101899001	3300016357	Soil	MTSLDGFRHVYDPETLSVMTNAFDRACDFFPVQFRGNGYLRKKLAMHIIHKVDDGESDPTRLADSAVLSLLWLKR
Ga0182032_115567421	3300016357	Soil	VLVEKRESEMTLSSGITYVYEPETVAIMINALDRACSVLPAQFSYSEYMRQKLALHIMHQVDDGENDPTRLAGS
Ga0182034_117688651	3300016371	Soil	MRGVYDPDTLTMMTHAFDRACAFLPTQLNSDYMRSKLALHIIRQVDDGESDPTRLVNSAILSLLWKAA
Ga0182040_102417334	3300016387	Soil	MTSLDGFRHVYDPETLSVMTNAFDRACDCFPVQFRGNDYLRKKLAMHIIHKVDDGESDPTRLADSAVLSLLWLKR
Ga0182040_102428532	3300016387	Soil	VLVEKRESEMTLSSGITYVYEPETVAIMINALDRACSVLPAQFSDSEYMRQKLALHIMHQVDDGENDPTRLAGSALFSVLW
Ga0182037_101593571	3300016404	Soil	MIPLIGSRCVYDPEVLMVMTDAFDRACDFLPAEFRDSDRMPRKLALHIIRQVDDGESDPARL
Ga0182037_117636921	3300016404	Soil	MTSLDGFRHVYDPETLSVMTNAFDRACDCFPVQFRGNDYLRKKLALHIIHQIDDGESDATRLADSAVLSLLWLK
Ga0182038_100803292	3300016445	Soil	MTSLDGFRHVYDPETLSVMTNAFDRACDCFPVQFRGNDYLRKKLALHIIHQIDDGESDPTRLADSAVLSLVWLKR
Ga0066667_118374543	3300018433	Grasslands Soil	VYDPETLTIMSSAFDRACGCLPHEFRNSAPTRRKLALHIIHRVDDGESDPTRLADSAILSLVR
Ga0066662_117258892	3300018468	Grasslands Soil	MIPSIGGRCVYDPETLAIMTSAFDRACDFLPAQLRDRDPVRRKLALHIIRQVDDGESDPTRLADAAILSLLR
Ga0126371_118713571	3300021560	Tropical Forest Soil	MIPLIGSRCVYDPEVLMVMTNAFDRACDFLPAEFRDSDHMRRKLALHIIRQVDDGESDPARLADSAILSLLR
Ga0209687_12226431	3300026322	Soil	MPLIGGRCVYDPEVLMVMTNAFDRACDFLPAQFRESDHMRRKLALHIIHQVDDGESDPARLAGSAIFSLLG
Ga0209213_10046922	3300027383	Forest Soil	MTQSSGIRCVYDPDTLSIMTDAFDRACDFLRVQFRDSDRIRRKLALRIIRHVDDGESDPARLAESAILSVLW
Ga0209843_10517962	3300027511	Groundwater Sand	MIPSSGRRVYDPNTLSVMTNAFDRACDFLPVQFRDSERMRRRLALHIIRQVNDGEIDARRLADSAILSVLR
Ga0208984_11485521	3300027546	Forest Soil	RRVGEMTQSSGIRCVYDPDTLSIMTDAFDRACDFLRVQFRDSDRIRRKLALRIIRHVDDGESDPARLAESAILSVLW
Ga0318516_101677371	3300031543	Soil	LEEWENEMTPLISSRCVYDPEVLMVMTNAFDRACDFLPAEFRDSDRMRRKLALHIIRQVDDGESDPARLTDSAILSLLR
Ga0318534_103948132	3300031544	Soil	MTPLISSRCVYDPEVLMVMTNAFDRACDFLPAEFRHSDHMRRKLALHIVHQVDDGESDPARLADSAILSLLR
Ga0318541_100399632	3300031545	Soil	MIPSIGTRCVYDPATLRIMTSAFDRACDLLPVEFRKSDHMRKKVALHIIRRIDDGESDPTRLADSAVLSLVQ
Ga0318541_107372371	3300031545	Soil	MTSLDGFRHVYDPETLSVMTNAFDRACDCFPVQFRGNDYLRKKLALHIIHQIDDGESDPTRLADSAVLSLLWPKR
Ga0310915_106085572	3300031573	Soil	MSGEMTSLDGFRHVYDPETLSVMTNAFDRACDFFPVQFRGNDYLRKKLAMHIIHKVDDGESDPTRLADSAVLSLLWLKR
Ga0318542_101503262	3300031668	Soil	VEEQESQMIPSIGTRCVYDPATLRIMTSAFDRACDLLPVEFRKSDHMRKKVALHIIRRIDDGESDPTRLADSAVLSLVQ
Ga0318542_106457022	3300031668	Soil	EMTSLDGFRHVYDPETLSVMTNAFDRACDFFPVQFRGNDYLRKKLAMHIIHKVDDGESDPTRLADSAVLSLLWLKR
Ga0318574_100415531	3300031680	Soil	MIPSIGTRCVYDPATLRIMTSAFDRACDLLPVEFRKSDHMRKKVALHIIRRIDDGESDPTRLADSAVLS
Ga0306917_111688272	3300031719	Soil	SDILLFCLSLWFDGACRRMSGEMTSLDGFRHVYDPETLSVMTNAFDRACDFFPVQFRGNDYLRKKLAMHIIHKVDDGESDPTRLADSAVLSLLWPKR
Ga0306918_101886043	3300031744	Soil	DPETLSVMTNAFDRACDFFPVQFRGNDYLRKKLAMHIIHKVDDGESDPTRLADSAVLSLLWLKR
Ga0318535_101224201	3300031764	Soil	VYDPATLRIMTSAFDRACDLLPVEFRKSDHMRKKVALHIIRRIDDGESDPTRLADSAVLSLVQ
Ga0318535_104875071	3300031764	Soil	ATALEEWENEMTPLISSRCVYDPEVLMVMTNAFDRACDFLPAEFRHSDHMRRKLALHIVHQVDDGESDPARLADSAILSLLR
Ga0318546_100757525	3300031771	Soil	WENEMTPLISSRCVYDPEVLMVMTNAFDRACDFLPAEFRHSDHMRRKLALHIVHQVDDGESDPARLADSAILSLLR
Ga0318550_103690502	3300031797	Soil	MIPSIGTRCVYDPATLRIMTSAFDRACDLLPVEFRKSDHMRKKVALHIIRRIDDGESDPTRLADSAVLSWIGWTGKTPNSHGLARL
Ga0318497_106846642	3300031805	Soil	MIPLIGSRCVYDPEVLMVMTNAFDRACDFLPAEFRHSDHMRRKLALHIVHQVDDGESDPARLADSAILSLLR
Ga0307473_100044667	3300031820	Hardwood Forest Soil	MTPSSGTRPVYDPDTLRIMTNAFDRACNFLPVQFRNSDCMRRKLALQIIRHLDDGESDPTRLADSAVLFVLRPLI
Ga0310917_105739901	3300031833	Soil	MTSLDGFRHVYDPETLSVMTNAFDRACDFFPVQFRGNDYLRKKLAMHIIHKVDNGESDPTRLADSAVLSLLWLKR
Ga0318511_104175512	3300031845	Soil	RCVYDPATLRIMTSAFDRACDLLPVEFRKSDHMRKKVALHIIRRIDDGESDPTRLADSAVLSLVQ
Ga0318495_105013542	3300031860	Soil	LISSRCVYDPEVLMVMTNAFDRACDFLPAEFRDSDRMRRKLALHIIRQVDDGESDPARLTDSAILSLLR
Ga0306919_102306242	3300031879	Soil	MIPLIGSRCVYDPEVLMVMTDAFDRACDFLPAEFRDSDRMRRKLALHIIRQVDDGESDPARLTDSAILSLLR
Ga0306919_103239781	3300031879	Soil	WATALEEWENEMTPLISSRCVYDPEVLMVMTNAFDRACDFLPAEFRHSDHMRRKLALHIVHQVDDGESDPARLADSAILSLLR
Ga0306925_105804863	3300031890	Soil	MTSLDGFRHVYDPETLSVMTNAFDRACDFFPVQFRGNDYLRKKLAMHIIHKVDDGESDPTRLADSAVLSLLWLKR
Ga0306925_108704141	3300031890	Soil	MTSLDGFRHVYDPETLSVMTNAFDRACDCFPVQFRGNDYLRTKLALHIIHQIDDGESDPTRLADSAVLSLLWPKR
Ga0306923_103207701	3300031910	Soil	SIKLEMSGEMTSLDGFRHVYDPETLSVMTNAFDRACDCFPVQFRGNDYLRKKLALHIIHQIDDGESDPTRLADSAVLSLLWPKR
Ga0306923_112089861	3300031910	Soil	MIPLIGSRCVYDPEVLMVMTNAFDRACDFLPAEFRDSDRMPRKLALHIIRQVDDGESDRARLADSAILSLLR
Ga0306921_102307333	3300031912	Soil	MTSLDGFRHVYNPETLSVMTNAFDRACDFFPVQFRGNDYLRKKLAMHIIHKVDDGESDPTRLADSAVLSLLWLKR
Ga0306921_111808611	3300031912	Soil	SLDGFRHVYDPETLSVMTNAFDRACDCFPVQFRGNDYLRKKLALHIIHQIDDGESDPTRLADSAVLSLLWPKR
Ga0310913_110030512	3300031945	Soil	TTALEEWENEMIPLIGSRCVYDPEVLMVMTNAFDRACDFLPAEFRDSDRMPRKLALHIIRQVDDGESDRARLADSAILSLLR
Ga0310910_100462657	3300031946	Soil	EEWENEMTPLISSRCVYDPEVLMVMTNAFDRACDFLPAEFRHSDHMRRKLALHIVHQVDDGESDPARLADSAILSLLR
Ga0306922_111262232	3300032001	Soil	MTSLDGFRHVYDPETLSVMTNAFDRACDCFPVQFRGNDYLRKKLALHIIHQIDDGESDPTRLADSAVLSLLWLKR
Ga0318507_100660392	3300032025	Soil	MTPLISSRCVYDPEVLMVMTDAFDRACDFLPAEFRDSDRMRRKLALHIIRQVDDGESDPARLTDSAILSLLR
Ga0310911_102300772	3300032035	Soil	MTSLDGFRHVYDPETLSVMTNAFDRACDFFPVQFRGNDYLRKKLALHIIHQIDDGESDPTRLADSAVLSLLWPKR
Ga0318556_106042651	3300032043	Soil	CVYDPEVLMVMTDAFDRACDFLPAEFRDSDRMRRKLALHIIRQVDDGESDPARLTDSAILSLLR
Ga0318558_100806212	3300032044	Soil	MTPLISSRCVYDPEVLMVMTDAFDRACDFLPAEFRDSDRMPRKLALHIIRQVDDGESDPARLTDSAILSLLR
Ga0318577_101659374	3300032091	Soil	DWATALEEWENEMTPLISSRCVYDPEVLMVMTNAFDRACDFLPAEFRHSDHMRRKLALHIVHQVDDGESDPARLADSAILSLLR
Ga0306920_1008605443	3300032261	Soil	MSPSSRMRGVYDPDTLTMMTHAFDRACAFLPTQLNSDYMRSKLALHIIRQVDNGESDPTRLVNSAILSLLWKAA
Ga0318519_105847251	3300033290	Soil	CVYDPEVLMVMTNAFDRACDFLPAEFRHSDHMRRKLALHIVHQVDDGESDPARLADSAILSLLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061715

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences