Metagenome / Metatranscriptome Family F061864

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061864
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	48 residues
Representative Sequence	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAANARQMSARERECGEL
Number of Associated Samples	112
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	91.80 %
% of genes near scaffold ends (potentially truncated)	93.13 %
% of genes from short scaffolds (< 2000 bps)	93.13 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (98.473 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.114 % of family members)
Environment Ontology (ENVO)	Unclassified (40.458 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.466 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.49% β-sheet: 0.00% Coil/Unstructured: 93.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00313	CSD	0.76

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.47 %
All Organisms	root	All Organisms	1.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.47 %
cellular organisms	root	All Organisms → cellular organisms	1.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.47 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.76 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.47 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.76 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.47 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.76 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.47 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.76 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.47 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.76 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004099\|Ga0058900_1012778	Not Available	751	Open in IMG/M
3300004101\|Ga0058896_1007683	Not Available	749	Open in IMG/M
3300004102\|Ga0058888_1004924	Not Available	815	Open in IMG/M
3300004102\|Ga0058888_1025794	Not Available	645	Open in IMG/M
3300004103\|Ga0058903_1026414	Not Available	637	Open in IMG/M
3300004116\|Ga0058885_1015105	Not Available	509	Open in IMG/M
3300004120\|Ga0058901_1017166	Not Available	693	Open in IMG/M
3300004120\|Ga0058901_1018405	Not Available	653	Open in IMG/M
3300004120\|Ga0058901_1030741	Not Available	727	Open in IMG/M
3300004121\|Ga0058882_1818492	Not Available	568	Open in IMG/M
3300004131\|Ga0058898_1002238	Not Available	809	Open in IMG/M
3300004138\|Ga0058905_1033936	Not Available	512	Open in IMG/M
3300004475\|Ga0068969_1062737	Not Available	547	Open in IMG/M
3300004616\|Ga0068930_1423211	Not Available	679	Open in IMG/M
3300004631\|Ga0058899_10123249	Not Available	749	Open in IMG/M
3300006426\|Ga0075037_1050715	Not Available	670	Open in IMG/M
3300009233\|Ga0103856_10047204	Not Available	762	Open in IMG/M
3300010185\|Ga0127504_1151072	Not Available	801	Open in IMG/M
3300010192\|Ga0127506_1179265	Not Available	808	Open in IMG/M
3300010198\|Ga0127509_1063768	Not Available	815	Open in IMG/M
3300010854\|Ga0126360_1016833	Not Available	803	Open in IMG/M
3300010860\|Ga0126351_1002045	Not Available	615	Open in IMG/M
3300010867\|Ga0126347_1099837	Not Available	808	Open in IMG/M
3300011044\|Ga0138545_157536	Not Available	788	Open in IMG/M
3300011053\|Ga0138531_134566	Not Available	696	Open in IMG/M
3300011057\|Ga0138544_1043761	Not Available	765	Open in IMG/M
3300011064\|Ga0138525_1134504	Not Available	795	Open in IMG/M
3300011072\|Ga0138563_1139656	Not Available	799	Open in IMG/M
3300011082\|Ga0138526_1108881	Not Available	799	Open in IMG/M
3300011089\|Ga0138573_1221950	Not Available	696	Open in IMG/M
3300011120\|Ga0150983_10225679	Not Available	801	Open in IMG/M
3300012402\|Ga0134059_1148668	Not Available	732	Open in IMG/M
3300019165\|Ga0184589_113380	Not Available	654	Open in IMG/M
3300019170\|Ga0184570_117013	Not Available	792	Open in IMG/M
3300019184\|Ga0184590_129411	Not Available	752	Open in IMG/M
3300019184\|Ga0184590_132390	Not Available	792	Open in IMG/M
3300019185\|Ga0184587_124819	Not Available	795	Open in IMG/M
3300019242\|Ga0181502_1136393	Not Available	714	Open in IMG/M
3300019250\|Ga0187790_1260460	Not Available	603	Open in IMG/M
3300019251\|Ga0187795_1284445	Not Available	507	Open in IMG/M
3300019256\|Ga0181508_1635062	Not Available	650	Open in IMG/M
3300019258\|Ga0181504_1254043	Not Available	588	Open in IMG/M
3300019258\|Ga0181504_1344812	Not Available	767	Open in IMG/M
3300019265\|Ga0187792_1430933	Not Available	587	Open in IMG/M
3300019273\|Ga0187794_1020627	Not Available	658	Open in IMG/M
3300019278\|Ga0187800_1147265	Not Available	771	Open in IMG/M
3300019278\|Ga0187800_1182283	Not Available	805	Open in IMG/M
3300021286\|Ga0179583_1087640	Not Available	812	Open in IMG/M
3300021860\|Ga0213851_1423150	Not Available	816	Open in IMG/M
3300021860\|Ga0213851_1839548	Not Available	582	Open in IMG/M
3300022498\|Ga0242644_1011915	Not Available	792	Open in IMG/M
3300022498\|Ga0242644_1011927	Not Available	791	Open in IMG/M
3300022499\|Ga0242641_1011597	Not Available	797	Open in IMG/M
3300022501\|Ga0242645_1008544	Not Available	780	Open in IMG/M
3300022502\|Ga0242646_1009905	Not Available	783	Open in IMG/M
3300022503\|Ga0242650_1006382	Not Available	801	Open in IMG/M
3300022505\|Ga0242647_1045349	Not Available	509	Open in IMG/M
3300022506\|Ga0242648_1024444	Not Available	798	Open in IMG/M
3300022507\|Ga0222729_1006729	Not Available	1112	Open in IMG/M
3300022508\|Ga0222728_1035166	Not Available	792	Open in IMG/M
3300022509\|Ga0242649_1019736	Not Available	796	Open in IMG/M
3300022512\|Ga0242676_1015576	Not Available	746	Open in IMG/M
3300022513\|Ga0242667_1014285	Not Available	767	Open in IMG/M
3300022513\|Ga0242667_1015710	Not Available	746	Open in IMG/M
3300022525\|Ga0242656_1109644	Not Available	549	Open in IMG/M
3300022528\|Ga0242669_1084216	Not Available	594	Open in IMG/M
3300022529\|Ga0242668_1078794	Not Available	637	Open in IMG/M
3300022531\|Ga0242660_1215224	Not Available	534	Open in IMG/M
3300022532\|Ga0242655_10099204	Not Available	797	Open in IMG/M
3300022533\|Ga0242662_10106842	Not Available	805	Open in IMG/M
3300022708\|Ga0242670_1019610	Not Available	798	Open in IMG/M
3300022708\|Ga0242670_1020308	Not Available	789	Open in IMG/M
3300022709\|Ga0222756_1045435	Not Available	646	Open in IMG/M
3300022711\|Ga0242674_1015939	Not Available	837	Open in IMG/M
3300022711\|Ga0242674_1050570	Not Available	571	Open in IMG/M
3300022713\|Ga0242677_1021681	Not Available	800	Open in IMG/M
3300022715\|Ga0242678_1020852	Not Available	797	Open in IMG/M
3300022716\|Ga0242673_1032966	Not Available	805	Open in IMG/M
3300022716\|Ga0242673_1034987	Not Available	789	Open in IMG/M
3300022717\|Ga0242661_1057332	All Organisms → cellular organisms → Eukaryota	740	Open in IMG/M
3300022718\|Ga0242675_1033079	Not Available	796	Open in IMG/M
3300022718\|Ga0242675_1056816	Not Available	669	Open in IMG/M
3300022720\|Ga0242672_1031910	Not Available	802	Open in IMG/M
3300022720\|Ga0242672_1046904	Not Available	714	Open in IMG/M
3300022721\|Ga0242666_1074744	Not Available	752	Open in IMG/M
3300022722\|Ga0242657_1068623	Not Available	818	Open in IMG/M
3300022724\|Ga0242665_10238631	Not Available	614	Open in IMG/M
3300022726\|Ga0242654_10185208	Not Available	716	Open in IMG/M
3300022726\|Ga0242654_10186137	Not Available	714	Open in IMG/M
3300023537\|Ga0247541_103081	Not Available	523	Open in IMG/M
3300023551\|Ga0247546_101566	Not Available	796	Open in IMG/M
3300023662\|Ga0247545_103149	Not Available	636	Open in IMG/M
3300030549\|Ga0210257_10455489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	767	Open in IMG/M
3300030740\|Ga0265460_10779137	Not Available	833	Open in IMG/M
3300030741\|Ga0265459_11559038	Not Available	759	Open in IMG/M
3300030759\|Ga0265745_1006442	Not Available	792	Open in IMG/M
3300030760\|Ga0265762_1135734	Not Available	574	Open in IMG/M
3300030760\|Ga0265762_1144476	Not Available	562	Open in IMG/M
3300030812\|Ga0265734_102336	Not Available	741	Open in IMG/M
3300030845\|Ga0075397_11150431	Not Available	760	Open in IMG/M
3300030873\|Ga0265751_106623	Not Available	687	Open in IMG/M
3300030940\|Ga0265740_1017101	Not Available	719	Open in IMG/M
3300030970\|Ga0075381_11527007	Not Available	757	Open in IMG/M
3300030976\|Ga0265739_101064	Not Available	949	Open in IMG/M
3300030978\|Ga0265757_105557	Not Available	649	Open in IMG/M
3300031011\|Ga0265774_101690	Not Available	795	Open in IMG/M
3300031011\|Ga0265774_105942	Not Available	541	Open in IMG/M
3300031017\|Ga0265744_114240	Not Available	524	Open in IMG/M
3300031018\|Ga0265773_1009850	Not Available	796	Open in IMG/M
3300031040\|Ga0265754_1034373	Not Available	534	Open in IMG/M
3300031042\|Ga0265749_101140	Not Available	795	Open in IMG/M
3300031043\|Ga0265779_112664	Not Available	536	Open in IMG/M
3300031090\|Ga0265760_10168060	Not Available	727	Open in IMG/M
3300031231\|Ga0170824_109460769	Not Available	654	Open in IMG/M
3300031663\|Ga0307484_107745	Not Available	690	Open in IMG/M
3300031667\|Ga0310111_121551	Not Available	781	Open in IMG/M
3300031826\|Ga0316031_107124	Not Available	662	Open in IMG/M
3300031866\|Ga0316049_106212	Not Available	802	Open in IMG/M
3300032028\|Ga0316052_104709	Not Available	766	Open in IMG/M
3300032515\|Ga0348332_11142275	Not Available	806	Open in IMG/M
3300032770\|Ga0335085_11521417	Not Available	696	Open in IMG/M
3300034673\|Ga0314798_008366	Not Available	1459	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.95%
Host-Associated	Host-Associated	2.29%
Engineered	Engineered	0.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.08%
Aquatic	Environmental → Aquatic	6.87%
Plants	Host-Associated → Plants	2.29%
Wastewater	Engineered → Wastewater	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.31%
Freshwater	Environmental → Aquatic → Freshwater	6.87%
Peat Moss	Host-Associated → Plants → Peat Moss	2.29%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.76%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.52%
Loam	Environmental → Terrestrial → Soil → Loam	10.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.11%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.29%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.76%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.34%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.05%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.29%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	2.29%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.76%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.63%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	4.58%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.05%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.05%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	2.29%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	2.29%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	0.76%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	0.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.76%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.76%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001448	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk Metatranscriptome	Environmental	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004101	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004102	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF212 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004103	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004116	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF206 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004131	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF232 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004138	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF246 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004475	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004616	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 15 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006426	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_054 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007253	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 A1 RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300009233	Microbial communities of water from Amazon river, Brazil - RCM9	Environmental	Open in IMG/M
3300010185	Peat moss associated microbial communities from Sphagnum species from Minnesota, USA - S1T2_Fa - Sphagnum fallax MT (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300010192	Peat moss associated microbial communities from Sphagnum species from Minnesota, USA - S1T2_Fc - Sphagnum fallax MT (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300010198	Peat moss associated microbial communities from Sphagnum species from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MT (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300010854	Boreal forest soil eukaryotic communities from Alaska, USA - W4-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011036	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 82 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011044	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 26 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011053	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 9 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011057	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 25 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011064	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 2 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011072	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 48 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011082	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011089	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019165	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019170	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLI3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019184	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019185	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019194	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019242	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019250	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019251	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019265	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019273	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021286	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022501	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022502	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022503	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022505	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023537	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023551	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023662	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030549	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO137-ANR102SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030759	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030812	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030845	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030873	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030970	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030976	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030978	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031011	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031017	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031042	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031043	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031663	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031667	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031826	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLI3 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031866	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032028	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20219J14954_10040081	3300001448	Wetland	VLDGPATRPMTPLAVENSVGKPAALPKAGRLMPAAGKRAWRTPIPDLVP
Ga0058900_10127781	3300004099	Forest Soil	MPHSKFSDRKALDGPAMRPTTPLAVENGVGKLAANARQMPA
Ga0058896_10076831	3300004101	Forest Soil	MPHSKFSDRKALDGPATRPITPLAVENGVGKLAANVRQMPAWERECGELPSP
Ga0058888_10049242	3300004102	Forest Soil	MPHSKFSDRKALDGPATRPITPLAVENGVGKLAANVRQMPAWERECGELPSPNL
Ga0058888_10257941	3300004102	Forest Soil	MPHSKFSDRKALDGPAMRPTTPLAVENGVGKLAANARQMSA
Ga0058903_10264142	3300004103	Forest Soil	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAAEVRQMSA
Ga0058885_10151052	3300004116	Forest Soil	MPHSKFSDRKALDGPAMRPMTPLAVENGVGKLAANARQMPA
Ga0058901_10171662	3300004120	Forest Soil	MPHSKFSGRKALDGPAMRPVTPLAVENGVGKLAAYVRQMPARERE
Ga0058901_10184051	3300004120	Forest Soil	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAANARQMSARERE
Ga0058901_10307411	3300004120	Forest Soil	MPHSKFSDRKALDGPAMRPTTPLAVENGVGKLAANARQMPAREKRVWR
Ga0058882_18184923	3300004121	Forest Soil	MPHSKFSDRKALDGPAMRPITPLAVENGVGKLAANRRQMPARERE
Ga0058898_10022382	3300004131	Forest Soil	MPHSKFSDRKALDGPATRPITPLAVENGVGKLAANVRQMPAWERECGELPS
Ga0058905_10339361	3300004138	Forest Soil	MPHSKFSDRKALDGPAMRPTTPLAVENGVGKLAAKARQMPA
Ga0068969_10627371	3300004475	Peatlands Soil	MPHSKFSDRKALDGPAMRPETPLAVENGVGKLAANARQMSARERECGELPS
Ga0068930_14232111	3300004616	Peatlands Soil	MPHSKFSDRKALDGPAMRPETPLVVENGVGKLAASERTRLMSAWEREHGELP
Ga0058899_101232491	3300004631	Forest Soil	MPHSKFSGRKALDGPAMRPVTPLAVENGVGKLAACVRQMPAWEREC
Ga0075037_10507151	3300006426	Permafrost Soil	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAAEARQMSARERECGELPSP
Ga0075182_111924991	3300007253	Wastewater Effluent	LKRAEKPHSKFSGRKALDGPATRPETPLAVENGVGKLAAPLRWVRLMPAWERE
Ga0103856_100472041	3300009233	River Water	MPHSIIQRRKTLDGPAMRPKTPLAVENGVGKPAALLRQVRQMSARERESGEL
Ga0127504_11510721	3300010185	Host-Associated	MPHSKFSGRKALDGPAMRPGKTPLAVENGVGKLAAKARPMSAWERECGELP
Ga0127506_11792652	3300010192	Host-Associated	MPHSKFSGRKALDGPAMRPGKTPLAVENGVGKLAAKARPMSAWERECGELPSP
Ga0127509_10637682	3300010198	Host-Associated	MPHSKFSGRKALDGPAMRPGKTPLAVENGVVKLAAKPRPMSAWERECGELPSPNLS
Ga0126360_10168332	3300010854	Boreal Forest Soil	MPHSKSSDRKALDGPAMRPIIPLAVENGVGKLAANWRQMPARERECGELPSP
Ga0126358_10609731	3300010856	Boreal Forest Soil	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAAE
Ga0126351_10020451	3300010860	Boreal Forest Soil	MPHSKFSGRKALDGPAMRPQTPLAVEISVGKLAVTAEAGRLMPARERECGELPSP
Ga0126347_10998371	3300010867	Boreal Forest Soil	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAAEVRQMSARERECGELPSPNLS
Ga0138590_1281041	3300011036	Peatlands Soil	LKRAEKPHSKSSRCKALDGPAMRPKTPLAVENSVGKLTAPLAGRQMPARERECGELPSPI
Ga0138545_1575361	3300011044	Peatlands Soil	MPHSKFSDRKALNGPAMRPIIPLAVENGVGKLAANARLMPAWERECGEL
Ga0138531_1345661	3300011053	Peatlands Soil	MPHSKFSDRKALDCPAMRPKTPLAVENGVGKLAANARQMSARERECGELPS
Ga0138544_10437611	3300011057	Peatlands Soil	MPHSKFSDRKALDGPAMRPKTPLAVENGVGKLAANARQMSARERECGELPS
Ga0138525_11345041	3300011064	Peatlands Soil	MPHSKFSDRKALDGPAMRPETPLAVENGVGKLAANARQMSARERECGELP
Ga0138563_11396561	3300011072	Peatlands Soil	MPHSKFSDRKALDGPAMRPNTPLAVENCVGKLAANARQMSARERECGELR
Ga0138526_11088811	3300011082	Peatlands Soil	MPHSKFSDRKALDGPAMRPKTPLAVENGVGKLAANARQMSARERECGE
Ga0138573_12219501	3300011089	Peatlands Soil	MPHSKFSDRKALVGPAMRPKTPLAVENGVGKLAANARQMS
Ga0150983_102256792	3300011120	Forest Soil	MPHSKFSGRKALDGPAMRPVTPLAVENGVGKLAAYVRQMSARERECGELP
Ga0134059_11486681	3300012402	Grasslands Soil	LKRAKRPHSKFSDRKALDGPAMRPDTPLAVENGVGSWQPPKGERQMPAWERECGELP
Ga0184589_1133802	3300019165	Soil	KFSDRKALDGPAMRPATPLAVENGVGKLAANARQMPAWERVTLIRVCEVI
Ga0184570_1170131	3300019170	Soil	MPHSKSSDRKALDGPAMRPIIPLAVENGVGKLAANVRRMPAWERESGELP
Ga0184590_1090562	3300019184	Soil	MPHSKFSDRKALDGPAMRPMTPLAVENGVGKLAANAR
Ga0184590_1294112	3300019184	Soil	MPHSKSSDRKALDGPAMRPIIPLAVENGVGKLAANARRMPAWERESG
Ga0184590_1323901	3300019184	Soil	MPHSKFSDRKALDGPAMRPTTPLAVENGVGKLAANARQMPAREKRVWRTP
Ga0184587_1248192	3300019185	Soil	MPHSKSSDRKALDGPAMRPHTPFAVENGVGKSAAKARLMPAWEREHGEL
Ga0184586_1335271	3300019194	Soil	MPHSKFSDRKALDGPAMRPTTPLAVENGVGKLAAN
Ga0181502_11363931	3300019242	Peatland	MPHSKSSDRKALDGPAMRPKIPLAVENGVGKLAANARRMPAWEREIGELPSPNLSLF
Ga0187790_12604601	3300019250	Peatland	MPHSKFSDRKALDGPAMRPRTPLAVENGVGKLAAIARQMSARERECGELPSP
Ga0187795_12844451	3300019251	Peatland	MPHSKFSDRKALDGPAMRPRTPLAVENGVGKLAAIARQMSARERECGELP
Ga0181508_16350621	3300019256	Peatland	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAANARQMSAREREY
Ga0181504_12540432	3300019258	Peatland	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAANARQM
Ga0181504_13448121	3300019258	Peatland	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAANARQMSA
Ga0187792_14309331	3300019265	Peatland	MPHSKFSDRKALDGPAMRPITPLAVENGVGKLAANARQMPARERESG
Ga0187794_10206271	3300019273	Peatland	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAAKARQM
Ga0187800_11472651	3300019278	Peatland	MPHSKFSDRKALDGPAMRPTTPLAVENGVGKLAANARQMPAWERE
Ga0187800_11822832	3300019278	Peatland	MPHSKSSDRKALDGPATRPATPLAAENGVGKLAANVRQMSAPGKREWRTPI
Ga0179583_10876401	3300021286	Vadose Zone Soil	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAAEARQMSARERECGELPSPNLS
Ga0213852_10797991	3300021858	Watersheds	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAANVRQM
Ga0213851_14231501	3300021860	Watersheds	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAANVRQMSARERECGELPSPNLSLF
Ga0213851_18395481	3300021860	Watersheds	MPHSKSSDRKALDGPAMRPIIPLAVENGVGKLAANARRMPAWERESGELPSPNLSL
Ga0242644_10119151	3300022498	Soil	MPHSKSSDRKALDGPAMRPIIPLAVENGVGKLAANARRMPAWERESGELP
Ga0242644_10119271	3300022498	Soil	MPHSKFSVRKALDGPAMRPATPLAVENGVGKLAANVRQMPAWERESG
Ga0242641_10115971	3300022499	Soil	MPHSKSSDRKALDGPAMRPVIPLAVENSVGKLAANARRMPAWERESGELP
Ga0242645_10085441	3300022501	Soil	MPHSKFSDRKALDGPAMRPMTPLAVENGVGKLAANARQMPAREKRVWR
Ga0242646_10099051	3300022502	Soil	MPHSKFSDRKALDGPAMRPMTPLAVENGVGKLAANARQMPAREKRVW
Ga0242650_10063822	3300022503	Soil	MPHSKFSDRKALDGPAMRPTTPLAVENGVGKLAARARQMSARERECGELP
Ga0242647_10453492	3300022505	Soil	MPHSKSSDRKALDGPAMRPKIPLAVENGVGKLAANARRMPAWEREIGELP
Ga0242648_10244442	3300022506	Soil	MPHSKFSDRKALDGPATRPITPLAVENGVGKLAANVRQMPAWERECGELPT
Ga0222729_10067292	3300022507	Soil	MPHSKFSDRKALDGPATRPITPLAVENSVGKLAANVRQMPAWERECGEL
Ga0222728_10351661	3300022508	Soil	MPHSKFSDRKALDGPATRPITPLAVENGVGKLAANVRQMPAWERECGELP
Ga0242649_10197361	3300022509	Soil	MPHSKFSDRKALDGPAMRPMTPLAVENGVGKLAANARQMPAREKRVWRTP
Ga0242676_10155762	3300022512	Soil	MPHSKSSDRKALDGPAMRPVIPLAVENSVGKLAANARRMPAWERESG
Ga0242667_10142852	3300022513	Soil	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAAKVRQMSA
Ga0242667_10157101	3300022513	Soil	MPHSKFSDRKALDGPAMRPITPLAVENGVGKLAANRRQMPARERESGELPSP
Ga0242656_11096442	3300022525	Soil	HAKFRDRGGLDGPAMGPATPLAGENGGGKLAAKVRQMPAWERECVGFKKRS
Ga0242664_10824491	3300022527	Soil	MPHSKFSDRKALDGPAMRPTTPLAVENGVGKLAAK
Ga0242669_10842161	3300022528	Soil	MPHSKFSDRKALDGPAMRPATPLAVENGVGKLAANVRQMPA
Ga0242668_10787941	3300022529	Soil	MPHSKFSDRKALDGPAMRPTTPLAVENGVGKLAANARQMPARE
Ga0242660_12152241	3300022531	Soil	KFSDRKALDGPAMRPATPLAVENGVGKLAANVRQMPAWERECGELTAGVLPTANA
Ga0242655_100992041	3300022532	Soil	MPHSKFSDRKALDGPAMRPATPLAVENGVGKRAANVRQMPAWERECGEL
Ga0242662_101068422	3300022533	Soil	MPHSKFSDRKALDGPATRPITPLAVENSVGKLAANVRQMPAWERECGELPS
Ga0242670_10196101	3300022708	Soil	MPHSKFSDRKALDGPAMRPTTPLAVENGVGKLAANARQMSARERECGEL
Ga0242670_10203082	3300022708	Soil	MPHSKFSDRKALDGPAMRPITPLAVENGVGKLAANRRQMPAWERECGELP
Ga0222756_10454351	3300022709	Soil	MPHSKFSDRKALDGPAMRPMTPLAVENGVGKLAANARQMPAREKRVWRTPIPQFV
Ga0242674_10159391	3300022711	Soil	MPHSKFSDRKALDGPAMRPMTPLAVENGVGKLAANARQMPAREKRVWRTPIP
Ga0242674_10505701	3300022711	Soil	MPHSKFSDRKALDGPAMRPKTPLAVENGVGKLAANARQMSARERECGELP
Ga0242677_10216812	3300022713	Soil	MPHSKFSDRKALDGPATRSITPLAVEKGVGKLAANVRQMPAWERECGEL
Ga0242678_10208521	3300022715	Soil	MPHSKFSGRKALDGPAMRPETPLAVENGVGKLAAKVRQMSARERECGELPS
Ga0242673_10329662	3300022716	Soil	MPHSKSSDRKALDGPAMRPKIPLAVENGVGKLAANARRMPAWEREIGELPS
Ga0242673_10349871	3300022716	Soil	MPHSKFSDRKALDGPAMRPMTPLAVENGVGKLAANARQMPAREKRVWRT
Ga0242661_10573321	3300022717	Soil	SDRKALDGPAMRPMTPLAVENGVGKLAANARQMPAREKRVKRT
Ga0242675_10330792	3300022718	Soil	MPHSKFSDRKALDGPATRPITPLAVENGVGKLAANVRQMPAWERECGEL
Ga0242675_10568162	3300022718	Soil	MPHSKFSDRKALDGPAMRPTTPLAVENGVGKLAARARQMSARERECGEL
Ga0242672_10319102	3300022720	Soil	MPHSKFSDRKALDGPATRPITPLAVENSVGKLAANVRQMPAWERECGELP
Ga0242672_10469041	3300022720	Soil	MPHSKFSDRKALDGPAMRPVTPLAVENVVGKLASNWRQMPARERECGEL
Ga0242666_10747441	3300022721	Soil	MPHSKFSDRKALDGPAMRPMTPLAVENGVGKLAAKARQMPAREKRVWRTPIP
Ga0242657_10686232	3300022722	Soil	MPHSKSSDRKALDGPAMRPVIPLAVENSVGKLAANARRMPAWERESGELPSPNLSLF
Ga0242665_101378141	3300022724	Soil	MPHSKFSDRKALDGPATRPITPLAVEKGVGKLAANVRQMP
Ga0242665_102386311	3300022724	Soil	MPHSKFSVRKALDGPAMRPATPLAVENGVGKLAANVRQMPAWERECGE
Ga0242654_101852081	3300022726	Soil	MPHSKFSDRKALDGPAMRPTTPLAVENGVGKLAANARQMPAREKR
Ga0242654_101861371	3300022726	Soil	MPHSKFSDRKALDGPAMRPVPPLAVENGVGKLAAEVRQMSARERECGELP
Ga0247541_1030811	3300023537	Soil	MPHSKSSDRKALDGPAMRPGIPLAVENGVGKLAANVRRMPAWERESGE
Ga0247546_1015662	3300023551	Soil	MPHSKSSDRKALDGPAMRPIIPLAVENGVGKLAANVRRMPAWERESGEL
Ga0247545_1031492	3300023662	Soil	MPHSKSSDRKALDGPAMRPHTPLAVENGVGKSAAKARLMPAWEREHGELP
Ga0210257_104554891	3300030549	Soil	MPHSNFSERKSLNGPAMRPATPLAVENGVEKLAANARQKSARERECGELPSP
Ga0265460_107791372	3300030740	Soil	MPHSKSSDRKALDGPAMRPVIPLAVENGVGKLAANVRRMSAWERECGELPSPRERKKRDSKK
Ga0265459_115590381	3300030741	Soil	MPHSKSSDRKALDGPAMRPHTPLAVENGVGKSAAKARLMPAWEREHGEL
Ga0265745_10064422	3300030759	Soil	MPHSKSSDRKALDGPAMRPIIPLAVENGVGKLAANVRRMPAWERESGE
Ga0265762_11357341	3300030760	Soil	MPHSKFSDRKALDGPAMRPMTPLAVENGVGKLAANARQMSARERECG
Ga0265762_11444761	3300030760	Soil	MPHSKSSDRKALDGPAMRPIIPLAVENGVGKLAANVRRMPAWERESGELPS
Ga0265734_1023361	3300030812	Soil	MPHSKFSGRKALDGPAMRPVTPLAVENGVGKLAAKVRQMSARERECG
Ga0075397_111504311	3300030845	Soil	MPHSKFSDRKALDGPAMRPMTPLAVENGVGKLAANARQMPARE
Ga0265751_1066231	3300030873	Soil	MPHSKSSDRKALDGPAMRPIIPLAVENSVGKLAANVRRMPAWERERGELPSP
Ga0265740_10171011	3300030940	Soil	MPHSKFSDRKALDGPAMRPMTPLAVENGVGKLAANARQMSARERECGEL
Ga0075381_115270072	3300030970	Soil	MPHSKFSDRKALDGPAMRPMTPLAVENGVGKLAANARQMPAREKRVWRTPIPQ
Ga0265739_1010641	3300030976	Soil	VTGANRKALDGPAMRPRTPPAVENGVGKLAAKARLMSARERECGELP
Ga0265757_1055571	3300030978	Soil	MPHSKSSDRKALDGPAMRPIIPLAVENSVGKLAANVRRMPAWERECGEL
Ga0265774_1016901	3300031011	Soil	MPHSKSSDRKALDGPAMRPKIPLAVENGVGKLAANARRMPAWEREIG
Ga0265774_1059421	3300031011	Soil	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAANARQMSARERECGEL
Ga0265744_1142401	3300031017	Soil	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAANARQMSARERECG
Ga0265773_10098501	3300031018	Soil	MPHSKSSDRKALDGPAMRPVIPLAVENSVGKLAANVRRMPAWERERGELP
Ga0265754_10343731	3300031040	Soil	MPHSKSSDRKALDGPAMRPIIPLAVENSVGKLAANVRRMPAWERECGELPS
Ga0265749_1011402	3300031042	Soil	LSPHSYFSDRKALDGPAMRPATPLAVENGVGKLAANVRQMPAWERECGE
Ga0265779_1126641	3300031043	Soil	MPHSKFSDRKALDGPAMRPVTPLAVENGVGKLAANARQMPAREKRVWRTP
Ga0265760_101680601	3300031090	Soil	MPHSKFSDRKALDGPAMRPMTPLAVENGVGKLAANARQMSARERECGELPSPICPC
Ga0170824_1094607691	3300031231	Forest Soil	MPHSKFSDRKALDGPAMRPMTPLAVENGVGKLAANARQMPAREK
Ga0307484_1077452	3300031663	Hardwood Forest Soil	MPHSKFSDRKALDGPAMRPTTPLAVENGVGKLAANARQMPAREKRVWRTPI
Ga0310111_1215511	3300031667	Soil	MPHSKFSDRKALDGPAMRPMTPLAVENGVGKLAANARQMSARERECGELP
Ga0316031_1071241	3300031826	Soil	MPHSKSSDRKALDGPAMRPIIPLAVENGVGKLAANVRRMPAWERESG
Ga0316049_1062121	3300031866	Soil	MPHSKFSDRKALDGPAMRPKTPLAVENGVGKLAANARQMSARERECG
Ga0316052_1047091	3300032028	Soil	MPHSKSSDRKALDGPAMRPIIPLAVENGVGKLAANVRRMPAWERE
Ga0348332_111422751	3300032515	Plant Litter	MPHSKFSDRKALDGPAMRPTTPLAVENGVGKLAANARQMPAREKRVWRTPIP
Ga0335085_115214171	3300032770	Soil	LKRAEKPHSKFSRRKALDGPAMRPETPLAVENSVGKLAALAGRRMPAWEREC
Ga0314798_008366_1285_1458	3300034673	Soil	MRAQRHHTKFRDRKALIGPAMRPVTPLAVENGVGKLAANARQMPARERECGELPSPIC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061864

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences