Metagenome / Metatranscriptome Family F061928

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F061928
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	94 residues
Representative Sequence	MNSETHSSGLDVLIVYESVRSGKRAKELCHRLGQQLAPDCKLNLSVWSLSALQLLPTIARAAASEADHAALLIVAVNGDKTLPRPVKSCLH
Number of Associated Samples	100
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	32.06 %
% of genes near scaffold ends (potentially truncated)	97.71 %
% of genes from short scaffolds (< 2000 bps)	92.37 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (96.183 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (54.199 % of family members)
Environment Ontology (ENVO)	Unclassified (55.725 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.885 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.09% β-sheet: 15.97% Coil/Unstructured: 52.94%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF02321	OEP	37.40
PF00437	T2SSE	9.92
PF09411	PagL	6.87
PF08281	Sigma70_r4_2	4.58
PF03928	HbpS-like	3.82
PF11154	DUF2934	3.82
PF00873	ACR_tran	3.05
PF04366	Ysc84	1.53
PF09209	CecR_C	1.53
PF00085	Thioredoxin	1.53
PF07386	DUF1499	0.76
PF16561	AMPK1_CBM	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	74.81
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	1.53
COG4446	Uncharacterized conserved protein, DUF1499 family	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.18 %
Unclassified	root	N/A	3.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.18 %
Unclassified	root	N/A	3.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.18 %
Unclassified	root	N/A	3.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.38 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	22.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.63 %
Unclassified	root	N/A	3.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	22.14 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	4.58 %
Unclassified	root	N/A	3.82 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	13.74 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	6.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.58 %
Unclassified	root	N/A	3.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	13.74 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	6.87 %
Unclassified	root	N/A	3.82 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	13.74 %
Unclassified	root	N/A	3.82 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	3.05 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	1.53 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.76 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	13.74 %
Unclassified	root	N/A	3.82 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	3.05 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	1.53 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	0.76 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	13.74 %
Unclassified	root	N/A	3.82 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	3.05 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1.53 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	0.76 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101067102	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300003852\|Ga0031655_10299893	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300004479\|Ga0062595_102397242	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300005166\|Ga0066674_10149026	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1104	Open in IMG/M
3300005177\|Ga0066690_10204411	All Organisms → cellular organisms → Bacteria → Acidobacteria	1315	Open in IMG/M
3300005181\|Ga0066678_10496489	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300005186\|Ga0066676_10988768	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300005294\|Ga0065705_10949274	Not Available	561	Open in IMG/M
3300005406\|Ga0070703_10041569	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1434	Open in IMG/M
3300005439\|Ga0070711_101016305	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300005440\|Ga0070705_101742834	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300005446\|Ga0066686_10788303	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300005450\|Ga0066682_10601051	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300005541\|Ga0070733_10944950	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300005569\|Ga0066705_10086886	All Organisms → cellular organisms → Bacteria → Proteobacteria	1836	Open in IMG/M
3300005586\|Ga0066691_10749492	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300005586\|Ga0066691_10806971	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300006237\|Ga0097621_102444111	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300006794\|Ga0066658_10425318	All Organisms → cellular organisms → Bacteria → Acidobacteria	722	Open in IMG/M
3300006844\|Ga0075428_102720797	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300006854\|Ga0075425_102630683	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300007258\|Ga0099793_10157812	All Organisms → cellular organisms → Bacteria → Acidobacteria	1077	Open in IMG/M
3300007258\|Ga0099793_10496717	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300007258\|Ga0099793_10586945	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300007788\|Ga0099795_10622561	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300009038\|Ga0099829_10264913	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300009100\|Ga0075418_11085240	All Organisms → cellular organisms → Bacteria → Acidobacteria	867	Open in IMG/M
3300009137\|Ga0066709_102360020	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	725	Open in IMG/M
3300009143\|Ga0099792_10274938	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300009156\|Ga0111538_13723336	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300009524\|Ga0116225_1322767	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300009824\|Ga0116219_10172791	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300009839\|Ga0116223_10064226	All Organisms → cellular organisms → Bacteria → Proteobacteria	2364	Open in IMG/M
3300010320\|Ga0134109_10477884	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300010335\|Ga0134063_10602123	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300010337\|Ga0134062_10139413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1070	Open in IMG/M
3300010362\|Ga0126377_13349102	Not Available	518	Open in IMG/M
3300010397\|Ga0134124_11727255	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	658	Open in IMG/M
3300010401\|Ga0134121_10610002	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1022	Open in IMG/M
3300010403\|Ga0134123_11325788	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	756	Open in IMG/M
3300011270\|Ga0137391_10231160	All Organisms → cellular organisms → Bacteria → Acidobacteria	1605	Open in IMG/M
3300011270\|Ga0137391_10259510	All Organisms → cellular organisms → Bacteria → Acidobacteria	1504	Open in IMG/M
3300011271\|Ga0137393_10402094	All Organisms → cellular organisms → Bacteria → Acidobacteria	1173	Open in IMG/M
3300011422\|Ga0137425_1100415	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300012189\|Ga0137388_11262600	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300012189\|Ga0137388_11596617	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	588	Open in IMG/M
3300012200\|Ga0137382_10619369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	773	Open in IMG/M
3300012200\|Ga0137382_10764077	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	694	Open in IMG/M
3300012202\|Ga0137363_10074787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2505	Open in IMG/M
3300012203\|Ga0137399_10485388	All Organisms → cellular organisms → Bacteria → Acidobacteria	1035	Open in IMG/M
3300012203\|Ga0137399_10658072	All Organisms → cellular organisms → Bacteria → Acidobacteria	881	Open in IMG/M
3300012203\|Ga0137399_11128807	Not Available	660	Open in IMG/M
3300012205\|Ga0137362_10151288	All Organisms → cellular organisms → Bacteria	1984	Open in IMG/M
3300012205\|Ga0137362_10243283	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300012205\|Ga0137362_10396332	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300012205\|Ga0137362_10408809	All Organisms → cellular organisms → Bacteria → Proteobacteria	1176	Open in IMG/M
3300012205\|Ga0137362_11687776	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300012206\|Ga0137380_10361496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1294	Open in IMG/M
3300012207\|Ga0137381_10529210	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300012209\|Ga0137379_10092545	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2907	Open in IMG/M
3300012211\|Ga0137377_10063761	All Organisms → cellular organisms → Bacteria	3437	Open in IMG/M
3300012211\|Ga0137377_10240638	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300012211\|Ga0137377_10670099	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	973	Open in IMG/M
3300012349\|Ga0137387_10142143	All Organisms → cellular organisms → Bacteria → Acidobacteria	1704	Open in IMG/M
3300012351\|Ga0137386_10190209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1474	Open in IMG/M
3300012351\|Ga0137386_10228455	All Organisms → cellular organisms → Bacteria → Acidobacteria	1337	Open in IMG/M
3300012354\|Ga0137366_10198471	All Organisms → cellular organisms → Bacteria → Acidobacteria	1499	Open in IMG/M
3300012354\|Ga0137366_10757342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	690	Open in IMG/M
3300012359\|Ga0137385_10366881	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300012361\|Ga0137360_10112906	All Organisms → cellular organisms → Bacteria	2100	Open in IMG/M
3300012361\|Ga0137360_10940722	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	745	Open in IMG/M
3300012362\|Ga0137361_10335312	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1387	Open in IMG/M
3300012362\|Ga0137361_11563894	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M
3300012582\|Ga0137358_10054596	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2667	Open in IMG/M
3300012683\|Ga0137398_10781415	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300012685\|Ga0137397_10688507	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	760	Open in IMG/M
3300012685\|Ga0137397_10937765	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	640	Open in IMG/M
3300012917\|Ga0137395_10949792	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300012918\|Ga0137396_10941323	Not Available	630	Open in IMG/M
3300012922\|Ga0137394_11049608	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300012922\|Ga0137394_11262713	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300012923\|Ga0137359_10200161	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300012923\|Ga0137359_10385115	All Organisms → cellular organisms → Bacteria → Acidobacteria	1245	Open in IMG/M
3300012923\|Ga0137359_10943610	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300012923\|Ga0137359_11144319	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300012925\|Ga0137419_10565914	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300012925\|Ga0137419_10900670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300012925\|Ga0137419_11243556	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300012927\|Ga0137416_10170836	All Organisms → cellular organisms → Bacteria → Acidobacteria	1721	Open in IMG/M
3300012927\|Ga0137416_10999506	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	747	Open in IMG/M
3300012927\|Ga0137416_11722426	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300012929\|Ga0137404_10525131	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1058	Open in IMG/M
3300012929\|Ga0137404_10552570	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300012930\|Ga0137407_10432252	All Organisms → cellular organisms → Bacteria → Acidobacteria	1222	Open in IMG/M
3300012930\|Ga0137407_11350646	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300012930\|Ga0137407_12282897	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	517	Open in IMG/M
3300012944\|Ga0137410_10598017	All Organisms → cellular organisms → Bacteria → Acidobacteria	911	Open in IMG/M
3300014154\|Ga0134075_10219415	All Organisms → cellular organisms → Bacteria → Acidobacteria	819	Open in IMG/M
3300014968\|Ga0157379_10193832	All Organisms → cellular organisms → Bacteria → Acidobacteria	1836	Open in IMG/M
3300015053\|Ga0137405_1424597	All Organisms → cellular organisms → Bacteria	2578	Open in IMG/M
3300015241\|Ga0137418_10861301	All Organisms → cellular organisms → Bacteria → Acidobacteria	671	Open in IMG/M
3300015242\|Ga0137412_10599718	All Organisms → cellular organisms → Bacteria → Acidobacteria	834	Open in IMG/M
3300015245\|Ga0137409_10834373	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300015264\|Ga0137403_11528125	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300017657\|Ga0134074_1073119	All Organisms → cellular organisms → Bacteria → Acidobacteria	1166	Open in IMG/M
3300017659\|Ga0134083_10097982	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300018431\|Ga0066655_10213263	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300018482\|Ga0066669_10331351	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1253	Open in IMG/M
3300020021\|Ga0193726_1257070	Not Available	703	Open in IMG/M
3300021170\|Ga0210400_10765907	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300024222\|Ga0247691_1043313	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300024224\|Ga0247673_1021909	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	855	Open in IMG/M
3300024310\|Ga0247681_1002448	All Organisms → cellular organisms → Bacteria	2150	Open in IMG/M
3300024330\|Ga0137417_1053733	All Organisms → cellular organisms → Bacteria → Acidobacteria	1476	Open in IMG/M
3300024330\|Ga0137417_1053734	All Organisms → cellular organisms → Bacteria → Acidobacteria	1016	Open in IMG/M
3300024331\|Ga0247668_1003269	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	3586	Open in IMG/M
3300025885\|Ga0207653_10026812	All Organisms → cellular organisms → Bacteria → Acidobacteria	1849	Open in IMG/M
3300025916\|Ga0207663_11440967	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300025936\|Ga0207670_10277976	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1304	Open in IMG/M
3300025942\|Ga0207689_11138679	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300026285\|Ga0209438_1137317	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300026320\|Ga0209131_1150923	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1174	Open in IMG/M
3300026557\|Ga0179587_10605782	All Organisms → cellular organisms → Bacteria → Acidobacteria	721	Open in IMG/M
3300028293\|Ga0247662_1025724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	986	Open in IMG/M
3300028536\|Ga0137415_10160188	All Organisms → cellular organisms → Bacteria	2085	Open in IMG/M
3300029922\|Ga0311363_10832327	All Organisms → cellular organisms → Bacteria → Acidobacteria	843	Open in IMG/M
3300030659\|Ga0316363_10138105	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300030688\|Ga0311345_11345645	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300030937\|Ga0138302_1654710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	815	Open in IMG/M
3300032180\|Ga0307471_101130397	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	949	Open in IMG/M
3300032205\|Ga0307472_101887443	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.66%
Host-Associated	Host-Associated	5.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.13%
Plants	Host-Associated → Plants	5.34%
Aquatic	Environmental → Aquatic	1.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.82%
Peat	Environmental → Terrestrial → Peat	1.53%
Freshwater	Environmental → Aquatic → Freshwater	0.76%
Sediment	Environmental → Aquatic → Sediment	0.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.02%
Loam	Environmental → Terrestrial → Soil → Loam	4.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.53%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	67.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.53%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	54.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.58%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.82%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.05%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.05%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.29%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.53%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.76%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1010671021	3300000364	Soil	MNIETHTSGSDVLIVYDSVRSGKRAKELCDRLGQQLASDSELNFSVWSLSALQLPTLAQAAASAAEHAALLIVAVNGDKTLPRSVVDCLHRCARAIRAADGALVAQLHGVLKMNEELSPAYGGLRQIAHHAGVRF
Ga0031655_102998931	3300003852	Freshwater Lake Sediment	MSLETHTSTLSVLIVYDSLRAGKGAKELCDRLGQQLAPDCKLDLSVWSLSALQLLPNMARAAAREAEHVALLIVAVNGVRTLPRTAKSCLDWCARGIRSAGGALMAQLHGILKIDEDRCPAYGSLRAMARHVGLRF
Ga0062595_1023972421	3300004479	Soil	MNSETHTSSSDVLIVCDTVRSGKRAKELCDRLGQRLAPDCKLNLSVWSLSALQLLPAIARAAAS
Ga0066674_101490262	3300005166	Soil	MNSETQTNSSDVLIVYDSVRSGKRAKELCDRIVQQLAPDYKLNLSIWRLSALEILPPLARAAAREAERATLLIVAVNGDKTLPRPAKSCLHWRARGTRVANGALVAQLHGILKMNEELCP
Ga0066690_102044111	3300005177	Soil	MNIETHTSGSDVLIVYDSVRSGKRAKEFCDRLGQHLAPDSEPNLSVWSLSALQLLPTTAWAAAREAEHAALLIVAVHGDKTMPR
Ga0066678_104964891	3300005181	Soil	MSIETHTSILDVLLVYDSVRSGKRAKELCDRLGQQLAPDCKLNLSVWSLSALQLLPTIARAAASEADHAALLIVAVNGDKTLPRPVKSCLHWCACGI
Ga0066676_109887682	3300005186	Soil	MNSETHTSSLDALIVYDSLRSGKRAKELCDRLGQQAAPDSKLNLSVWSLSSLQLLPAIARAAASEAEHA
Ga0065705_109492742	3300005294	Switchgrass Rhizosphere	MNLETHTSGLDVLIVYDSVRSGKRAKELCDRLGQQLAPDWTLNFSVWSLSALQLPTMAQAVAG
Ga0070703_100415692	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MNSVTHTSSSDALIVYDTVRSGKHAKELCDRLGQQLAPDCKLNLSVWSLSALQLLPAMARAAASEAEHAALLIVAVNGDKTFPRPIKSFLHRCGGAIRAADGALVAQLHGIFKMNEKL
Ga0070711_1010163051	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNTETHTSSLDVLIVYDSLRSGKRAKELCDRLGQQLAPDSKLNLSIWSLSQLQLLPALARAAASEAEHAALLIVAVHGDKTLPRPVKSLLHTCARAIHAADGALVAQLHGILKMNVELCPAYRCLREIADHSGVRF
Ga0070705_1017428342	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSTETQAHNLDVIIVYDSVRSAKRAKELCDRLGKQLAPDSKPNLSVWSLSALQFLPTTARAAASKAEHAALLIVAVHGDKTLPRLVKSCLHRCARAIHAADGALV
Ga0066686_107883031	3300005446	Soil	MNSETHSSGLDVLIVYESVRSGKRAKELCHRLGQQLAPDCKLNLSVWSLSALQLLPTIARAAASEADHAALLIVAVNGDKTLPRPVKSCLHWCACGICAADGALVAQLHGILKMNEELCPAYGC
Ga0066682_106010512	3300005450	Soil	MNSETQTNSSDVLIVYDSVRSGKRAKELCDRIGQQLAPDYKLNLSIWRLSALEILPPLARAAAREAERATLLIVAVNGDKTLPRPAKSCLHWRARGTRVAN
Ga0070733_109449501	3300005541	Surface Soil	MNSETHASSLDVLIIYDSLRSGKRAKELCDRLGQQLAPECKLNLRVWSLSALQLPTLAQTAASEAEHAALLIVAVNGDKTLPRSVKSCLRGCAGAIHAVDGALVAQLHGILKINEELCPAYGCLRQIAH
Ga0066705_100868863	3300005569	Soil	MNSETHSSGLDVLIVYESVRSGKRAKELCHRLGQQLAPDCKLNLSVWSLSALQLLPTIARAAASEADHAALLIVAVNGDKTLPRP
Ga0066691_107494922	3300005586	Soil	MSIETHTNSLEVLIVYHSVRSGKRAKELCDRLGKQLAPDCKLNLSVWSLSSLQLLPATARAAA
Ga0066691_108069711	3300005586	Soil	MNLETHTSGLDVLIVYDSVRSGKRAKELCDRLAQQLPPDGKLNFSVWSLSALQLPTLAQAAAREAEHAALLIVAVKGDKTLPRQVRNCLYWCA
Ga0097621_1024441111	3300006237	Miscanthus Rhizosphere	MDVLIVHDSVRSGKRAKELCDRLGKQFAPDCELNLSVWSLSALQLLPATARAAASAAENAGLLIVAIHGAKTLPQPVKSFLHRCARAIHAADGALVAQLHGILKMNQE
Ga0066658_104253182	3300006794	Soil	MSIETHTNSLEVLIVYHSVRSGKRAKELCDRLGQQLAPDRKLNLSVWSLSALQLPTLAQAAASGAEHAALLIVAVNGDKTLPRSVKGCLHSCARAIHAADGVLVAQLH
Ga0075428_1027207971	3300006844	Populus Rhizosphere	MNLETHTSGLDALIVFDNLRSGKRAKELCDRLGQQFAPDCELNLSVWSLSALQLLPAMARAAASEAEHAALLIVAVDGDKMLPRPVKSCLHRCAGAIRAADGALVAQLHGILKMNEELC
Ga0075425_1026306832	3300006854	Populus Rhizosphere	MNSATQTNNLDVLIVYDSVRSAKRAKELCDRLGQQLAPDGKLNFSVWSLSALQLPSLAQAAAGEARQAALLIVAV
Ga0099793_101578123	3300007258	Vadose Zone Soil	MNIETHTSGSDVLIVYDSVRSGKRAKELCDRLGQQLAPDRKLNFSVWNLSALQLPTLAQAAADEAEHAALLIVAVNGDKT*
Ga0099793_104967171	3300007258	Vadose Zone Soil	MNSETNTNSTDVLIVYDSVRSGKRAKELCDRLGQYCELNLRIWNLSALRLPALARAAAHEAGRAILLIVAVDGDEM
Ga0099793_105869452	3300007258	Vadose Zone Soil	LIFYDSVRSGKRAKELCDRLGQNCELSLSVWSLSALRLPALARAAAHEAERAILLIVAVNGDETLPRHVKTCLHTCARAIHAADGALVAQFHSILKMNE
Ga0099795_106225612	3300007788	Vadose Zone Soil	MSIETYTSSLDVLIVYDTVRSGKRAKELCDRLGQQLAPDCKLNFSVWSLSALRLPTPAQAVASAVEHAGLLIVAVNGDKTLPQPVKSFLHRCARTIHAADGAFVAQL
Ga0099829_102649134	3300009038	Vadose Zone Soil	MSTYTSNSDVLIVYDSVRSGKRAKELFDRLEQHCELSLSVWSLSALRLPALARAAAHEAGRAILLIVAVDGDEMLPRHVKTCLHKCA
Ga0075418_110852401	3300009100	Populus Rhizosphere	MSIEKHTDSLDVLIVYDIVSSGKRAKELCDRLGQQLAPDCKLNLSVWSLSALQLLPTMARAAASEAEHAALLIVAVNGDKMLPRPAKSCLAWCARGIHAADGALVAQLHGI
Ga0066709_1023600201	3300009137	Grasslands Soil	MNLETHTSGLGVLIVYDSVRSGKRAKELCDRLRQHCELNLSVWSLSALRLPALARAAAHEAERAILLIVAVNGDETLPRHVKTCLHRCARAIHAADGALVAQFHSILKMNEE
Ga0099792_102749381	3300009143	Vadose Zone Soil	MSIETHPNSSDVLIVYDSVRSGKRAKELYDRFGQQLAPDCELELSVWSLSSLQLPTVARAAAYEAKSAALLIIAVNGDKTLAQPTKNCLHWCARGIHATDGALVVQIHGILKMNKELC
Ga0111538_137233361	3300009156	Populus Rhizosphere	MNSETHTSSSDVLIVYDTVHSGKRAKELCDRLGQQLAPDRKLNLSVWSLSALQLLPATARAAASEAEHAALLIVAVDGDKMLPRPVKSCLHRCAGAIRAADGALVAQLHGILKMNEELYPAYVCL
Ga0116225_13227671	3300009524	Peatlands Soil	MSIETHPNSSDVLIVYDSVRSGKRAKELCDRLGQQLVPECKLNLSVWSLSALQLPTLAQTAASEAEHAALLIVAVNGDETLPRSVKGCLYRCARAIYAADGALVAQLH
Ga0116219_101727912	3300009824	Peatlands Soil	MSIETHPNSSDVLIVYDSVRSGKRAKELCDRLGQQLVPECKLNLSVWSLSALQLPTLAQTAASEA
Ga0116223_100642261	3300009839	Peatlands Soil	MSIETHPNSSDVLIVYDSVRSGKRAKELCDRLGQQLVPECKLNLSVWSLSALQLPTLAQTAASEAEH
Ga0134109_104778841	3300010320	Grasslands Soil	MNSETQTNSSDVLIVYDSVRSGKRAKELCDRIGQQLAPDYKLNLSIWSLSALQLPTLAQAVASAAEHAGFLIVAMHGEKTLPQPVKS
Ga0134063_106021231	3300010335	Grasslands Soil	MNSETHSSGLDVLIVYESVRSGKRAKELCHRLGQQLAPDCKLNLSVWSLSALQLLPTIARAAASEADHAALLIVAVNGDKTLPRPVKSCLH
Ga0134062_101394131	3300010337	Grasslands Soil	MNSETQTNSSDLLIVYDSVRSGKRAKELCDRIGQQLAPDYKLNLSIWRLSALEILPPLARAAAREAERATLLIVAVNGDKTLPRPAKSCLHWR
Ga0126377_133491021	3300010362	Tropical Forest Soil	MKTELEINELQRLSGDPRATRLNVLIVYDNVRAGKRAKELCDRLKQQLAPEAELHLRVWSLSALQLPTFAQAAATQAERAAVLMVAVHGDNALSRSVENCLDRCARGIHSAGGTLV
Ga0134124_117272552	3300010397	Terrestrial Soil	MNSETHTSSSDVLIVYDTVRSGKRAKELCDRIGQQLAPDRKLNLSVWSLSALQLLPATARAAASEAE
Ga0134121_106100022	3300010401	Terrestrial Soil	MKNEAHTSSSGVLIIYDTVRSGKRAKEFCDRLAQQLAPSGKLNFSVWSLSSLQLLPATARAAASAAEHAALLIVAVNGDKTLPQPVKSFLHR
Ga0134123_113257882	3300010403	Terrestrial Soil	LDALIVYDTVHSGKRAKELCDRLGQRLAPDCKLNLSVWSLSALQLLPAMARAAASEAEHAALLIVAVNGDKTFPRPIKSFLHRCGGAIRAADGALVAQLHGIFKMNEKLCPAYVCLRE
Ga0137391_102311601	3300011270	Vadose Zone Soil	MNSETHSSGLDVLIVYESVRSGKRAKELCHRLGQQLAPDCKLSLSVWSLSALQLLPTIARAAASEADHAALLIVAVNGDKTLPRPVKSCLHWCACAIRAADGAL
Ga0137391_102595103	3300011270	Vadose Zone Soil	VLIVYDSVRSGKRAKELCDRLAQQLAPDGKLNFSVWSVSALQLPTLAHAAAREAEHAALLIVAVNGGETLPRHVKTCLHRCARAIHAADGALVAQFHSILKMNEELCPAYGCLKQIAHHAGV
Ga0137393_104020942	3300011271	Vadose Zone Soil	VLIVYDSVRSGKRAKELCDRLGQQLAPDCEVNLSVWSLSALQLPTLAQTAASAAEHAALLIVALNGDKMLPRPVKSCLHRF
Ga0137425_11004151	3300011422	Soil	MNSETHTSSLDVLIVYDSVCSGKRAKELCDRLGQQLAPDCKLNLNVWSLSALQLLPAMAQAAASEAEHLLKAANANIG
Ga0137388_112626002	3300012189	Vadose Zone Soil	MNSETLTNGLDALIVYDNVRSGKRAKELCDRLGQQLAPDCKLNLSVWSLSALELLPPLAWAAALEAVRANLLIVAVNGDKTFPRPVKSCLHRCAGAIRAADGALVAQLHGIL
Ga0137388_115966172	3300012189	Vadose Zone Soil	VLIVYDSVRSGKRAKDLCDRLGHHCELNLSVWSLSALRIPALARAAAHEAARAILLIVAVNGDETLSRHVKTSLHRCARAIH
Ga0137382_106193691	3300012200	Vadose Zone Soil	LIVYESVRSGKRAKELFHRLGQQLAPDCKLNLSVWSLSALQLFPTIARAAASEADHAALLIVAVNGDKTLPRPVKSCLHWCARGIRAADGALVAQLNGILKMNEKLCPA
Ga0137382_107640772	3300012200	Vadose Zone Soil	MEVLIVYDNVRSGRRAKEFCDRLKQQLAPNCKINLSVWSVFALQLPALAQAAAREAERAALLIVAVNGD
Ga0137363_100747871	3300012202	Vadose Zone Soil	MNSETHTSSLDALIVYDSLRSGKRAKDLCDRLGQQLAPDCKLNLKVWSLSALQLLPTMAQAAASE
Ga0137399_104853881	3300012203	Vadose Zone Soil	MISSSDKPMNGETHASSLDVLIVYDSVRSGKRAKELCDRLGQQLAPDCKLNLSVWSLSALQLPTLARAAAHEAERAALLIVAVNGDKMLPRS
Ga0137399_106580722	3300012203	Vadose Zone Soil	MNIETHTSGSDVLIVYDSVRSGKRAKEFCDRLGQHLAPDSKPNLSVWSLSALQLLPTMARAAASAAEHAALLIVAVNGDKTLPRPVKSCLHTCARGIRAADGALVA
Ga0137399_111288072	3300012203	Vadose Zone Soil	MSIETHTNSLDVLIVYDSVRSGKRAKELCDRLGQQLAPDCKLNVSVWSLSALQLLPSMAQAAASEAE
Ga0137362_101512881	3300012205	Vadose Zone Soil	MNSETHTSSLDALIVYDSLRSGKRAKELCDRLGQQAAPDSKLNLSFWSLSALQLLPAMARAAASGAEHAALLIVAVNGDKTLPRPVKSL
Ga0137362_102432833	3300012205	Vadose Zone Soil	MEVLIVYDSIRSGKRAKELCDRLGQQLAPDCELNLSVWSLSELQLLPPLARAAARETE
Ga0137362_103963321	3300012205	Vadose Zone Soil	MKVLIVYDNVRSGKRAKELCDRLGQQLAPDCELSLSVWSLTALQLPSLSRAAAREAELATLLIVAVNGDKTLSQPVKNCLHWCLHGIRATDGAL
Ga0137362_104088093	3300012205	Vadose Zone Soil	MRTHTSNSDVLIVYDSVRSGKRAKELCDRLGQHSELNLSVWSLSAMRLPALARAAAHEAERAILLIVAV
Ga0137362_116877762	3300012205	Vadose Zone Soil	MNSEIPTGSLDALIVYDSVRSGKRAKELCDRLGQHCELSLSVWSLSALEFFSPLARVAASEAEHAALLVV
Ga0137380_103614961	3300012206	Vadose Zone Soil	MNSETQISSSDVVIVYDSVRSGKRAKELCDRIGQQLAPDYKLNLSIWRLSALELLPPLARAAAREAERATLLIVAVDGDKTLPRPVKSCLHW
Ga0137381_105292102	3300012207	Vadose Zone Soil	MNSETHSSGLDVLIVYESVRSGKRAKELCHRLGQQLAPDCELNLTVWSLSALQLLPPLARAAARETERPNL
Ga0137379_100925451	3300012209	Vadose Zone Soil	MNSETHSSGLDVLIVYESVRSGKRAKELCHRLGQQLAPDCKLNLSVWSLSALQLLPTIARAAASEADHAALLIVAVNGDKTLPRPVKSCLHWCACGIRAADGALVAQLHGILKMNEELCPAYG
Ga0137377_100637611	3300012211	Vadose Zone Soil	MNSETHTSSPDVLIVYDSVRSGKRAKDLCDRLGQQLAPDCKLNLGVWSLSALELLPPLTRAAAIAAERAALLIVAVNGDKTLP
Ga0137377_102406383	3300012211	Vadose Zone Soil	MNSETQTSNSAVGIVYDSVRSGKRAKELCDRLGQQLAPDRKLNLGVWSLSALELLPPLTRAAAIAAERAALLIVAVNG
Ga0137377_106700993	3300012211	Vadose Zone Soil	MEVLIVYDSVRSGKRAKELCDREQRLAPNSELNLSVWSLSALQLPTLARAAAREAERADLLIVAVHGDK
Ga0137387_101421432	3300012349	Vadose Zone Soil	MNSETQTNSSDLLIVYDSVRSGKRAKELCDRLGQQLAPDGKLNFSVWSLSALQLLPTTARAAASEAEHASLLIVAVNGDKTLPRLVKSCLHRCARAIHAADGALVAQLHGILKI
Ga0137386_101902091	3300012351	Vadose Zone Soil	MNSETQTNSSDVLIVYDSVRSGKRAKELCDRLGQQLAPDCKLNFSVWSLSALQLLPTTARAAASEAEHASLLIVAVNGDKTLPRHVKSCLHRCARAIHAADGALVAQLHGILKMNEELCPAYGCLRQ
Ga0137386_102284551	3300012351	Vadose Zone Soil	MNSETHSSGLDVLIVYESVRSGKRAKELCHRLGQQLAPDCKLNLSVWSLSALQLLPTIARAAASEADHAALLIVAVNGDKTLPRPVKSCLHW
Ga0137366_101984712	3300012354	Vadose Zone Soil	MNSETHSSGLDVLIVYESVRSGKRAKELCHRLGQQLAPDCKLNLSVWSLSALQLLPTIARAAASEADHAALLIVDVNGDKTLPRPVKSCLHWCACGIRAADGALVAQLHGILKM
Ga0137366_107573422	3300012354	Vadose Zone Soil	MNSETQTSSSDVVIVYDSVPSGKRAKELCDRIGQQLAPDCELNLSVWSLSELQLLPPLAPAAARETERTNLLIVAVDGDKTLPRPV
Ga0137385_103668812	3300012359	Vadose Zone Soil	MNSETHSSGLDVLIVYESVRSGKRAKELCHRLGQQLAPDCKLNLSVWSLSVLQLLPTIARAAASEADHAALLIVAVNGDKT
Ga0137360_101129064	3300012361	Vadose Zone Soil	VLIVYDNVRSGKRAKELCDRLAQQLAPDGKLNFSVWSLSALQLPALARAAAHEAERATLLIVAVNGDETLPRHVKTCLYWCARAIHAAYGALV
Ga0137360_109407221	3300012361	Vadose Zone Soil	MKVLIVYDNVRSGKRAKELCDRLGQQLAPDCELSLSVWSLTALQLPSLSRAAAREAELATLLIVAVNGDKTLSRPVKN
Ga0137361_103353124	3300012362	Vadose Zone Soil	MNSETHTSSLDALIVYDSLRSGKRAKELCDRLGQQAAPDSKLNLSVWSLSSLQLLPAIARAAASEAEHAALLIVAVNGDK
Ga0137361_115638941	3300012362	Vadose Zone Soil	MNTHTRYLDVLVVYDSIRSGKRAKELCDRLGQRLAPDCKLNLSVWSLSALQLLPAMARAAASGAEHAALLIVAVNGDKTLPR
Ga0137358_100545961	3300012582	Vadose Zone Soil	MNSETHSSGLDVLIVYESVRSGKRAKELCHRLGQQLAPNSKLNLSVWSLSALQLLPTIARAAASEAEHAGLLIVAVNGDKTLPRAVKSC
Ga0137398_107814151	3300012683	Vadose Zone Soil	MMSIETHTGSLDALIVYDSVRSGKRAKELCDRLGQQLAPERELNLSVWSLSALELLPPLARAAAREAEHAALLIVAVDGDKPLPQSVRNCLHSKRSLKWVCSITSKA*
Ga0137397_106885071	3300012685	Vadose Zone Soil	MNLETHTSGLGVLIVYDSVRSGKRAKELCDRLAQQLAPDGKLNFNVWSVSALQLPTLAHAAACEAEHAALLI
Ga0137397_109377651	3300012685	Vadose Zone Soil	MNSETHTSSLDVLIVYDSVRSGKRAKELCDRLGQQLAPNCKLNLSVWSLSALQLPPLARAAASEASRAALLIVALNGDNAFPPPV
Ga0137395_109497921	3300012917	Vadose Zone Soil	MNPSNLETHASGLDVLIVYDSVRSGKRAKELCDRLGQQLAPDCELNFSVWSLSALQLPTLAQAAASAPEHAALLIV
Ga0137396_109413232	3300012918	Vadose Zone Soil	MDLDAHASGLDVLIVYDNVRSGKRAKELCDRLGQQLAPDCKLNFSVWSLSALQLPTLAQAAASAA
Ga0137394_110496082	3300012922	Vadose Zone Soil	VLIVYDSVRSGKRAKELYERLGQQLAPDCKLNLSVWSLSSLQLLPATARAAASEAEHAALLIVAVNGDKTLSRPVKSFLHRCARAIHA
Ga0137394_112627131	3300012922	Vadose Zone Soil	MNSETRTSSSEVLIVYDSVPSGKRAKELCDRLGRQFTPDCELNLSVWSLSALDLLPPLAQAAA
Ga0137359_102001611	3300012923	Vadose Zone Soil	MEALIVYDSVRSGKRAKELCDRLGQQLAPDCELSLSVWSLTALQLPSLSRAAAREAELATLLIVA
Ga0137359_103851151	3300012923	Vadose Zone Soil	MNSETHTNSTDVLIVYDSVRSGKRAKELCDRLGQYCELNLRIWNLSALRLPALARAAAHEAGRAILLIVAVDGEM
Ga0137359_109436101	3300012923	Vadose Zone Soil	MSIETHTSSLDVLIVYDSVRSGKRAKELCDRLGQQLAPDCKLNLKVWSLSALQLLPTMAQAAASEAEHAALLIVAVNGDKTLPQLVKNCLHSC
Ga0137359_111443192	3300012923	Vadose Zone Soil	MRNKNSNQNSKVSIETHTSNSDVLIVYDSVRSGKRAKELFDRLGQHCELSLSVWSLSALRLPALARAAAHEAERAILLIVAVNGGETLPRHVKTCLRWCAGAIHAADGALVAQL
Ga0137419_105659141	3300012925	Vadose Zone Soil	MNLDTQTSSLDVLIVYDSVRSGKRAKELCDRLGQQIAPDRKLNFSVWSLSALQLPTLAQAAASEAEHAALLIVAVNGDKT
Ga0137419_109006703	3300012925	Vadose Zone Soil	MISSSDKPMNGETHASSLDVLIVYDSVRSGKRAKELCDRLGQQLAPDCKLNLSVWSLSALQFLPTMARAAASDAEHAALLIVAVHG
Ga0137419_112435562	3300012925	Vadose Zone Soil	MNSESHSSGLDVLIVYESVRSGKRAKELCHRLGQQLAPDCKLNLSVWSLSALQLLPTIARAAASEADHAALLIVAVNG
Ga0137416_101708363	3300012927	Vadose Zone Soil	MISSSDKPMNGETHASSLDVLIVYDSVRSGKRAKELCDRLGQQLAPDCKLNLSVWSLSALQFLPTMARAAASDAEHAALLIVAVNGDKTLPRPVKSCLHWCARGIRAADGALVAQLHGILKM
Ga0137416_109995061	3300012927	Vadose Zone Soil	VLIVYDNVRSGKRAKELCDRLGQHCELSLSVWSLSALRLPALARAAAHEAERAILLIVAVNGDETLPRHVKTCLHRCARAIHVVDGALVAQLHSILKMNEEL
Ga0137416_117224261	3300012927	Vadose Zone Soil	MNSESHSSGLDVLIVYESVRSGKRAKELCHRLGQQLAPDCKLNLSVWSLSALQLLPTIARAASSEAEHAALLIVAVNGDKTLPQPVKSCLHRCARAIHVAAGALVAQLHGILKMNEELCPAY
Ga0137404_105251311	3300012929	Vadose Zone Soil	MEVLIVYDSVRSGKRAKELCDRLEQQLAPNCKLNLSIWSLSALQLPTLAQAAAREAERAALLIVAVNGDKTLPRPVRNCLYWCARGIR
Ga0137404_105525703	3300012929	Vadose Zone Soil	MRNKNSNQNSKVSIETHTSNSDVLIVYDSVRSGKRAKELFDRLRQHCELSLSVWSLSALRLPALAQAAAHEAERAILLVVAVNGDE
Ga0137407_104322522	3300012930	Vadose Zone Soil	MNSETHSSGLDVLIVYESVRSGKRAKELCHRLGQQLAPDCKLNLSVWSLSALQLLPTIARAAASEADHAALLIVAVNGDKTLPRPVKSCLHWCA
Ga0137407_113506461	3300012930	Vadose Zone Soil	MRNKNSNQNSKVSIETHTSNSDVLIVYDSVRSGKRAKELFDRLGQHCELSLSVWSLSALRLPALARAAAHEAERAILLVVAVNGDETLPRHVKTCLHRCARAIHAVDGAL
Ga0137407_122828972	3300012930	Vadose Zone Soil	MEALIVYDSVRSGKRAKELCDRLGQQLAPDCKLNFSVWSLSALQLLPNTARAAASEAEHASLL
Ga0137410_105980173	3300012944	Vadose Zone Soil	MISSSDKPMNGETHASSLDVVIVYDSVRSGKRAKELCDRLGQQLAPDCKLNLSVWSLSALQLPTLAQAVASAAEHAALLIVAVNGDKPLPR
Ga0134075_102194152	3300014154	Grasslands Soil	MSIETHTNSLDVLIVYDSGRSGKRAKELCDRLGKQLAPDCELNLSVWSLSSLQLLPATARAAASAAEHAGLLIVAVNGDKTLLQPVKSFLHRCAR
Ga0157379_101938321	3300014968	Switchgrass Rhizosphere	MDVLIVYDSVRSGKRAKELCDRLGKQFAPDCELNISVWSLSTLQLFPATVRATASAAEDAGLLIVAIHGEKTLPQPVKSFLHRCARAIHAADGVLVAQLHGILKMNEEICPAYGCLREIAHHAGV
Ga0137405_14245971	3300015053	Vadose Zone Soil	MEALIVYDSVRSGKRAKELCDRLGQQLAPDCELRLSVWSLSALQLPTLEQAVASAAEHPGLLIVAVMAIEPCRGPSRVAST
Ga0137418_108613011	3300015241	Vadose Zone Soil	MNPSNLETHTSGLDVLIVYDSVRSGKRAKELCDRLGQQLAPDSELNLSVWSLSALQLPTLAQAAAS
Ga0137412_105997182	3300015242	Vadose Zone Soil	MEVLIVYDNIRSGKRAKELCDRLAQQLAPGSELNISVWSLTALQLLPTMAQADARAAEHATLLIVAVNGDKTLPRLVKSFLHRCARAIHAADGALVAQLHGILKMNEELCPVYGCLRQIAHH
Ga0137409_108343731	3300015245	Vadose Zone Soil	MNPTNLETHTSGLDVLIVYDSIRSGKRAKELCDRLGQQLAPDCKLNLSVWSLSALQLLPTMARAAASDAEHAALLIVAVNGDKTLPRPVKSCL
Ga0137403_115281252	3300015264	Vadose Zone Soil	VLIVYDSVRSGKRAKELCDRLGQQLAPDCKLNLSVWSSSALQLLPAMARAAISEAEHAALLIVAVNGDKTLPRPVTSFLHRCARAIHAADGALMAQLHGILKMNVELCPAYGCLREIAHHGGVRFFSEVVE
Ga0134074_10731191	3300017657	Grasslands Soil	MNSETHSSGLDVLIVYESVRSGKRAKELCHRLGQQLAPDCKLNLSVWSLSALQLLPTIARAAASEADHAALLIVAVNGDKTLPRPVKSCLHWCACGICAADGALVA
Ga0134083_100979822	3300017659	Grasslands Soil	MSIETHTNSLDVLSVYDSVRSGKRAKELCDRLGKQLAPDCELNLSVWSLSSLQLLPATARAAVSAAEHAGLLIVAVNGDKTLPQSVKSFLHR
Ga0066655_102132631	3300018431	Grasslands Soil	MNSETHSSGLDVLIVYESVRSGKRAKELCHRLGQQLAPDCKLNLSVWSLSALQLLPTIARAAASEADHAALLIVAV
Ga0066669_103313511	3300018482	Grasslands Soil	MNSETNTSSLGVLFVYDSVRPGKRAKELCDRLARQLAPDCELSLGVWSLSALELLPPLERAAASEAEHAALLIVAVHGDKTLPRPVKSFLHRCARAIHGAD
Ga0193726_12570701	3300020021	Soil	MNIETHTSTSEFLIIYDSVRAGKRAKELCDRLGQRLAPDCELNFSAWSLSALGLPSVARAAAREAERATLLIVAVNGDKNLHQ
Ga0210400_107659072	3300021170	Soil	MNLETPTSNLDVLIVYDSVRSGKRAKELCDRLTQQLAPDCELNLSVCSLSALQLPTLALAAASEAEHAALLVVAVNGDKTFPRSVRNCLYWCARGIRADDGALVAQLHGILRINEELSPAYCSTARGYAK
Ga0247691_10433131	3300024222	Soil	MNIETYASTSEVLIVYDSVRAGKRAKEFCDRLGQRLAPGCELNLRVWSLSALGLPAAARAAVREAERATLLIVAVNGDKRLPRPVRNCLHWCARRIHPTDGAL
Ga0247673_10219091	3300024224	Soil	MNSETHTSSSDVLIVCDTVRSGKRAKELCDRLGQRLAPDCKLNLSVWSLSGLQLLPAIARAAASEAEHAALLIVAVNCDKTLPRSVEGWLHTCARAIHAADGALVAQLHSILKINEELCPACGCLRQIARDAGVQFFS
Ga0247681_10024483	3300024310	Soil	MIRDHMNIMSSDTHTSSLDVLIVYDCLRSGKRAKELCDRLGPQLAPDSKLNLSVWSLSALQLLPPMAR
Ga0137417_10537332	3300024330	Vadose Zone Soil	MNIETHTSGSDVLIVYDSVRSGKRAKEFCDRLGQHLAPDSKPNLSVWSLSALQLLPTMARAAASAAEHAALLIVAVNGDKTLPRPVKSCLHTCARGIRAADGA
Ga0137417_10537341	3300024330	Vadose Zone Soil	MNIETHTSGSDVLIVYDSVRSGKRAKEFCDRLGQHLAPDSKPNLSVWSLSALQLLPTMARAAASAAEHAALLIVAVNGDKTLPRPVKSCLHTCARGIRAADGALV
Ga0247668_10032693	3300024331	Soil	MNSETHTSSSDALIVYDTVRSGKRAKEFCDRLGQRLAPDCELHLSVWSLSALRLLSAMARAAASAAEHAALLIVAVNGDKKLPGPIKSFLHRCGGAIRAADGALVAQLHDIFK
Ga0207653_100268121	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MNSVTHTSSSDALIVYDTVRSGKHAKELCDRLGQQLAPDCKLNLSVWSLSALQLLPAMARAAASEAEHAALLIVAVNGDKTLPRPIKSFLHRCAGAIRAADGALVVLVPGVSLERLLSDDSITEIMVN
Ga0207663_114409671	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MNSETHTKSTDVLIVYDTVRCGKRAKELCDRLGQQLAPGSELNLSVWSLSAPQLPTLARAVAHEAERAFLLIVALSGDQTLPQ
Ga0207670_102779761	3300025936	Switchgrass Rhizosphere	MDVLIFYDSVRSGKRAKELCDRLGKQFAPDCELNLSVWSLSALQLLPATARAAASAAENAGLLIVAIHGAKTLPQPVKSFLHRCARAIHAADGALVAQLHGILKMNQEICPAYGCLREIAHHAGVR
Ga0207689_111386791	3300025942	Miscanthus Rhizosphere	MDVLIVYDSVRSGKRAKELCDRLGKQFAPDCELNLSVWSLSALQLLPATARAAASVAEDAGLLI
Ga0209438_11373171	3300026285	Grasslands Soil	MSTETQTHNLDVIIVYDSVRSAKRAKELCDRLGKQLAPDSKPNLSVWSLSALQFLPTTARAAASKAEHAALLIVAVHGDKTLPR
Ga0209131_11509233	3300026320	Grasslands Soil	MSINTHTSSLDALIVYDNVRSGKRAKELCDRLGQQLAPDRELNLSVWSLSALELLPPLAQAAAREAEHAALLIVAINGDTMLPQAVRSCLHWCARGIRAADGALV
Ga0179587_106057821	3300026557	Vadose Zone Soil	MKTNMYLETHTSGLGVLIVYDSVRSGKRAKELCDRLGPQLGPDCELNLSVWSLSALQLPTLAAAGEAEHADLLIVAVNGDETLPRHVETCLHRCARAIHAVDGALVAQFHSILKMNEELCPAYGCLKQIAHHADVRFFS
Ga0247662_10257241	3300028293	Soil	MIRDHMNIMNSDTHTSSLDVLIVYDCLRSGKRAKELCDRLGPQLAPDSKLNLSVWSLSALQLLPPMARAAASAAEHATLLIVAVNGDKTLPRPVQSLLHKCARAIHAAD
Ga0137415_101601881	3300028536	Vadose Zone Soil	MNIETHTSGSDVLIVYDSVRSGKRAKELCDRLEQQLAPNCKLSLSVWSLSALELLPSLARAAASEAEHAALLIVAVNGDKTLPQPVKSCLHRCARAIHVAAGALVAQLHGILKMNEELCPAYGCL
Ga0311363_108323271	3300029922	Fen	MIILYDSVRSGKRAKELCDRLGLQLAPDCKLNLSIWSLSALQLLPGLAQAAAREAEHAALLVVSVNGGNTLPRTARNCLD
Ga0316363_101381052	3300030659	Peatlands Soil	MSIETHPNSSDVLIVYDSVRSGKRAKELCDRLGQQLVPECKLNLSVWSLSALQLPTLAQTAASEAEHAAL
Ga0311345_113456452	3300030688	Bog	MIILYDSVRSGKRAKELCDRLGLQLAPDCKLNLSIWSLSALQLLPGLAQAAAREAEHAALLVVSVNGGNTLPRTARNCLDSCARGIRAANGALMAQLHGILKMNEELCPAYGCLRAIARHAGVRFFSEV
Ga0138302_16547101	3300030937	Soil	MNIETHTSTPEVLIVYDNVRAGKRAKELCDRLGQRLAPGCELNLSVWSLSALELPAVARVAAREAERATLLIVAVN
Ga0307471_1011303971	3300032180	Hardwood Forest Soil	MTSETQTNSSDVLIVYDSVRSGKRAKELCDRLGQQLAPDCKLNFSVWSLSALQLPALAQAAASAAEHAALLIVAVNGDKTL
Ga0307472_1018874431	3300032205	Hardwood Forest Soil	MNSETHTNSLDVLIVYDSVRSGKRAKELCDRLAQQLDPDSEPNFSVWSLSALQLPRLAQAVASAAEHAALLIVAVNGDK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061928

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences