Metagenome / Metatranscriptome Family F061938

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F061938
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	50 residues
Representative Sequence	MTSQVVNLQVTASVPIDCDFWSEDDGWKGLCKSLSVTVSGSSFEDAKKNMA
Number of Associated Samples	116
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.69 %
% of genes near scaffold ends (potentially truncated)	91.60 %
% of genes from short scaffolds (< 2000 bps)	90.08 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.840 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (10.687 % of family members)
Environment Ontology (ENVO)	Unclassified (27.481 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.275 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.59% β-sheet: 15.19% Coil/Unstructured: 77.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00072	Response_reg	6.87
PF00923	TAL_FSA	3.05
PF04972	BON	2.29
PF02518	HATPase_c	2.29
PF02311	AraC_binding	1.53
PF15780	ASH	1.53
PF12779	WXXGXW	1.53
PF11218	DUF3011	1.53
PF07617	DUF1579	0.76
PF00583	Acetyltransf_1	0.76
PF17167	Glyco_hydro_36	0.76
PF01844	HNH	0.76
PF00982	Glyco_transf_20	0.76
PF04191	PEMT	0.76
PF01740	STAS	0.76
PF01227	GTP_cyclohydroI	0.76
PF03176	MMPL	0.76
PF00563	EAL	0.76
PF08448	PAS_4	0.76
PF02321	OEP	0.76
PF00990	GGDEF	0.76
PF07963	N_methyl	0.76
PF01527	HTH_Tnp_1	0.76
PF02154	FliM	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	3.05
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.53
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.76
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.76
COG1868	Flagellar motor switch protein FliM	Cell motility [N]	0.76
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.76
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.76
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.76
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.76
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.84 %
Unclassified	root	N/A	9.16 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.84 %
Unclassified	root	N/A	9.16 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.84 %
Unclassified	root	N/A	9.16 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	74.05 %
Unclassified	root	N/A	9.16 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	13.74 %
Unclassified	root	N/A	9.16 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.87 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	12.98 %
Unclassified	root	N/A	9.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.87 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12.98 %
Unclassified	root	N/A	9.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.87 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.87 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	3.05 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.76 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.76 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.87 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	2.29 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.76 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.76 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	0.76 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.87 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	2.29 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.76 %
Flavisolibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavisolibacter	0.76 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.76 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.16 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.87 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	2.29 %
Flavisolibacter tropicus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavisolibacter → Flavisolibacter tropicus	0.76 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.76 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.76 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_103936059	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300000955\|JGI1027J12803_108767818	Not Available	552	Open in IMG/M
3300000955\|JGI1027J12803_109299249	Not Available	653	Open in IMG/M
3300001356\|JGI12269J14319_10023807	All Organisms → cellular organisms → Bacteria	4271	Open in IMG/M
3300001593\|JGI12635J15846_10748331	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	561	Open in IMG/M
3300001990\|JGI24737J22298_10205258	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300004103\|Ga0058903_1007877	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300004121\|Ga0058882_1383434	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1128	Open in IMG/M
3300004135\|Ga0058884_1378587	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300004136\|Ga0058889_1396595	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	984	Open in IMG/M
3300004631\|Ga0058899_11125547	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300005181\|Ga0066678_10361844	All Organisms → cellular organisms → Bacteria → Acidobacteria	958	Open in IMG/M
3300005365\|Ga0070688_100146967	All Organisms → cellular organisms → Bacteria → Acidobacteria	1607	Open in IMG/M
3300005366\|Ga0070659_100513531	All Organisms → cellular organisms → Bacteria → Acidobacteria	1022	Open in IMG/M
3300005367\|Ga0070667_100354361	All Organisms → cellular organisms → Bacteria → Acidobacteria	1329	Open in IMG/M
3300005439\|Ga0070711_100107791	All Organisms → cellular organisms → Bacteria → Acidobacteria	2039	Open in IMG/M
3300005439\|Ga0070711_100519793	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300005466\|Ga0070685_10304550	All Organisms → cellular organisms → Bacteria → Acidobacteria	1075	Open in IMG/M
3300005544\|Ga0070686_100738680	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300005564\|Ga0070664_101428446	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300005578\|Ga0068854_100362022	All Organisms → cellular organisms → Bacteria → Acidobacteria	1190	Open in IMG/M
3300006028\|Ga0070717_10679636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300006055\|Ga0097691_1009045	All Organisms → cellular organisms → Bacteria	5090	Open in IMG/M
3300006055\|Ga0097691_1065687	All Organisms → cellular organisms → Bacteria → Acidobacteria	1179	Open in IMG/M
3300006237\|Ga0097621_100244735	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1569	Open in IMG/M
3300006860\|Ga0063829_1436480	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300009029\|Ga0066793_10542689	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300009101\|Ga0105247_11226493	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300009521\|Ga0116222_1359889	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300009523\|Ga0116221_1252253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300009525\|Ga0116220_10586480	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300009623\|Ga0116133_1004509	All Organisms → cellular organisms → Bacteria	3576	Open in IMG/M
3300009631\|Ga0116115_1126286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300009641\|Ga0116120_1253418	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300009644\|Ga0116121_1259182	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300009698\|Ga0116216_10965221	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300009839\|Ga0116223_10600770	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300010373\|Ga0134128_11439189	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300010373\|Ga0134128_12090043	Not Available	624	Open in IMG/M
3300010379\|Ga0136449_103658340	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300011120\|Ga0150983_12178143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1166	Open in IMG/M
3300011120\|Ga0150983_14572767	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300011120\|Ga0150983_15281325	Not Available	815	Open in IMG/M
3300012206\|Ga0137380_11268975	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300012349\|Ga0137387_10212073	All Organisms → cellular organisms → Bacteria → Acidobacteria	1392	Open in IMG/M
3300012351\|Ga0137386_10548764	All Organisms → cellular organisms → Bacteria → Acidobacteria	832	Open in IMG/M
3300012918\|Ga0137396_10515982	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300012930\|Ga0137407_10284603	All Organisms → cellular organisms → Bacteria → Acidobacteria	1507	Open in IMG/M
3300012930\|Ga0137407_10569307	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300012985\|Ga0164308_11578347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300014156\|Ga0181518_10084555	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	1801	Open in IMG/M
3300014158\|Ga0181521_10494461	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300014638\|Ga0181536_10026156	All Organisms → cellular organisms → Bacteria	4511	Open in IMG/M
3300014968\|Ga0157379_10454776	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1182	Open in IMG/M
3300015371\|Ga0132258_11113820	All Organisms → cellular organisms → Bacteria → Acidobacteria	1996	Open in IMG/M
3300015371\|Ga0132258_11799553	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300015371\|Ga0132258_13211207	All Organisms → cellular organisms → Bacteria → Acidobacteria	1127	Open in IMG/M
3300015373\|Ga0132257_100004651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13041	Open in IMG/M
3300015374\|Ga0132255_100015304	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9203	Open in IMG/M
3300017931\|Ga0187877_1138257	All Organisms → cellular organisms → Bacteria → Acidobacteria	987	Open in IMG/M
3300017933\|Ga0187801_10277070	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300017940\|Ga0187853_10131331	All Organisms → cellular organisms → Bacteria → Acidobacteria	1211	Open in IMG/M
3300017940\|Ga0187853_10251860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300018008\|Ga0187888_1230856	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300018008\|Ga0187888_1263793	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300018009\|Ga0187884_10041698	All Organisms → cellular organisms → Bacteria	2197	Open in IMG/M
3300018014\|Ga0187860_1336050	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300018017\|Ga0187872_10449085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300018019\|Ga0187874_10091628	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300018024\|Ga0187881_10279483	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300018033\|Ga0187867_10357890	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M
3300018040\|Ga0187862_10009940	All Organisms → cellular organisms → Bacteria	8132	Open in IMG/M
3300018043\|Ga0187887_10825150	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300018057\|Ga0187858_10831640	Not Available	545	Open in IMG/M
3300019786\|Ga0182025_1048319	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300019786\|Ga0182025_1090078	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300019877\|Ga0193722_1041899	Not Available	1172	Open in IMG/M
3300020581\|Ga0210399_10158448	All Organisms → cellular organisms → Bacteria → Acidobacteria	1873	Open in IMG/M
3300020583\|Ga0210401_11205944	Not Available	615	Open in IMG/M
3300021046\|Ga0215015_10330502	All Organisms → cellular organisms → Bacteria → Acidobacteria	1102	Open in IMG/M
3300021170\|Ga0210400_10740479	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300021181\|Ga0210388_10572649	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	989	Open in IMG/M
3300021401\|Ga0210393_10529646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	962	Open in IMG/M
3300021405\|Ga0210387_10523590	All Organisms → cellular organisms → Bacteria → Acidobacteria	1054	Open in IMG/M
3300021420\|Ga0210394_11179925	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300021477\|Ga0210398_10389333	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300021479\|Ga0210410_10640883	All Organisms → cellular organisms → Bacteria → Acidobacteria	942	Open in IMG/M
3300021479\|Ga0210410_11348988	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	606	Open in IMG/M
3300025271\|Ga0207666_1077446	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300025321\|Ga0207656_10154270	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavisolibacter → Flavisolibacter tropicus	1089	Open in IMG/M
3300025454\|Ga0208039_1040813	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300025464\|Ga0208076_1071840	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300025473\|Ga0208190_1003345	All Organisms → cellular organisms → Bacteria → Acidobacteria	4692	Open in IMG/M
3300025619\|Ga0207926_1050746	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300025899\|Ga0207642_10310771	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300025906\|Ga0207699_11170366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	569	Open in IMG/M
3300025909\|Ga0207705_11416652	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300025915\|Ga0207693_11442991	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	509	Open in IMG/M
3300025916\|Ga0207663_10170465	All Organisms → cellular organisms → Bacteria → Acidobacteria	1545	Open in IMG/M
3300025932\|Ga0207690_10433672	All Organisms → cellular organisms → Bacteria → Acidobacteria	1053	Open in IMG/M
3300026075\|Ga0207708_11630195	Not Available	567	Open in IMG/M
3300026291\|Ga0209890_10229932	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300027565\|Ga0209219_1174727	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300027829\|Ga0209773_10488919	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300027855\|Ga0209693_10624399	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300027862\|Ga0209701_10372153	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	803	Open in IMG/M
3300027882\|Ga0209590_10283708	All Organisms → cellular organisms → Bacteria → Acidobacteria	1061	Open in IMG/M
3300027895\|Ga0209624_11098136	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300028017\|Ga0265356_1024874	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300028536\|Ga0137415_10054426	All Organisms → cellular organisms → Bacteria	3870	Open in IMG/M
3300028781\|Ga0302223_10111262	All Organisms → cellular organisms → Bacteria → Acidobacteria	906	Open in IMG/M
3300029882\|Ga0311368_10144039	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1959	Open in IMG/M
3300029944\|Ga0311352_11445211	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300029999\|Ga0311339_10242521	All Organisms → cellular organisms → Bacteria → Acidobacteria	1991	Open in IMG/M
3300030058\|Ga0302179_10162236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300030706\|Ga0310039_10167285	All Organisms → cellular organisms → Bacteria → Acidobacteria	881	Open in IMG/M
3300030707\|Ga0310038_10002987	Not Available	12343	Open in IMG/M
3300030879\|Ga0265765_1065295	Not Available	520	Open in IMG/M
3300031231\|Ga0170824_117360555	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300031232\|Ga0302323_101137802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300031234\|Ga0302325_10510428	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1812	Open in IMG/M
3300031236\|Ga0302324_100466682	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1856	Open in IMG/M
3300031708\|Ga0310686_105871112	All Organisms → cellular organisms → Bacteria → Acidobacteria	787	Open in IMG/M
3300031708\|Ga0310686_109066242	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300031716\|Ga0310813_11993720	Not Available	547	Open in IMG/M
3300031720\|Ga0307469_10308211	All Organisms → cellular organisms → Bacteria → Acidobacteria	1308	Open in IMG/M
3300032160\|Ga0311301_11960159	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300032515\|Ga0348332_13589060	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300032783\|Ga0335079_10896876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	911	Open in IMG/M
3300033412\|Ga0310810_10811825	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.26%
Host-Associated	Host-Associated	13.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.18%
Aquatic	Environmental → Aquatic	19.08%
Plants	Host-Associated → Plants	13.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.31%
Freshwater	Environmental → Aquatic → Freshwater	19.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.87%
Peat	Environmental → Terrestrial → Peat	6.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.11%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.08%
Loam	Environmental → Terrestrial → Soil → Loam	16.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.53%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.66%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.11%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.05%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.53%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.40%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.34%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.34%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.58%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.82%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.29%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.29%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.53%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.53%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.76%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.76%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.76%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300004103	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004135	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004136	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF214 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006860	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1039360592	3300000955	Soil	MTSQAVKIQVIASVPIECEFWPEDDGWKGLSRSPSATVRGSSFEDAK
JGI1027J12803_1087678183	3300000955	Soil	MTSEVVNLEVIASIPIDYDFWSEDDGWKGLCKSLS
JGI1027J12803_1092992491	3300000955	Soil	GVVTTSQVVNLEVTASVPIECEFWPEDHGWKGLSRSPSVIVPWQ*
JGI12269J14319_100238074	3300001356	Peatlands Soil	MDSQAVKLQVTASVPIDCEFWPEDDGWKGLCKKPSVTVRGSSFEDAKKNMATELQVHI
JGI12635J15846_107483312	3300001593	Forest Soil	MTSQVVNLEVTASIPIDCDFWSEDDGWKGLCKSLSVTVRGSSFEDA
JGI24737J22298_102052581	3300001990	Corn Rhizosphere	MTSQAVKIQVIASVPIECEFWPEDDGWKGLSRSPSATVRGSSFEDAKKNMAS
Ga0058903_10078771	3300004103	Forest Soil	MTSQVVNLQVTASLPIDCDFWSEDDGWKGLSKSLSVTVHGSSFEDAKKNM
Ga0058882_13834343	3300004121	Forest Soil	MTSQVVNLQVTASLPIDCDFWSEDDGWKALSKSLSVTVHGSSFEDAKKNMA
Ga0058884_13785872	3300004135	Forest Soil	MTSQIVKLEVSASIPIECEFWSEDDGWKGLSRNPAVTVRGSSFEDAKKNMATEL
Ga0058889_13965953	3300004136	Forest Soil	MTFQVVSLLVSASIPVDCDFSPEDDGWKGFCKSLSLTVYGSSFENAK
Ga0058899_111255472	3300004631	Forest Soil	MTSQIVNLRVTASIPLDCDFWCEDDGWKGLCKSPSITVRGSSFEDAKKNMASELQA
Ga0066678_103618441	3300005181	Soil	VTASIPIDCDFWAEDDGWKGLCKSLSVTVRGSSFEDAKKNMATELQVHIER
Ga0070688_1001469673	3300005365	Switchgrass Rhizosphere	MTSQAVNLEVTVSVPIDCDFWSEDDGWKGVCKSLSFTVRGSSFEDAKKNMA
Ga0070659_1005135312	3300005366	Corn Rhizosphere	MTSQAVNLEVTVSVPIDCDFWSEDDGWKGVCKSLSFTVRG
Ga0070667_1003543613	3300005367	Switchgrass Rhizosphere	MTSQAVNLEVTVSVPIDCDFWSEDDGWKGVCKSLSFTVRGSSFEDAKKN
Ga0070711_1001077912	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTSEHVTLDVSASIPIDCDFWSEDDGWKGLCRSLSVSVWGSSFEDAKKNMAGE*
Ga0070711_1005197932	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTSEVVTLEVMATIPISCDFWSQDDGWQGLCKSLSLTVRGSSFEDAKKNMA
Ga0070685_103045503	3300005466	Switchgrass Rhizosphere	MTSQAVNLEVTVSVPIDCDFWSEDDGWKGVCKSLSFTVRGSSFED
Ga0070686_1007386801	3300005544	Switchgrass Rhizosphere	MTSEIVNLEVTASIPMDCDFWSEDGAWKGFCQQLSVTVNG
Ga0070664_1014284462	3300005564	Corn Rhizosphere	MTSQAVKIQVIASVPIECEFWPEDDGWKGLSRSPSATVRGSSFEDAKKNMA
Ga0068854_1003620223	3300005578	Corn Rhizosphere	MTSQAVKIQVIASVPIECEFWPEDDGWKGLSRSPSATVRGSSFEDAKKNMASELQA
Ga0070717_106796361	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTSEVVTLEVMATIPIDCDFWSQDDGWQGLCESLSLTVGGSSFED
Ga0097691_10090453	3300006055	Arctic Peat Soil	MTSEIVNLKVTANIPIDCDFWSEGDGWRGLCKSPSVTVRGSGFEDANKKHGN*
Ga0097691_10656871	3300006055	Arctic Peat Soil	MTSEVVTLEVTASIPIDCDFWSEDDGWKGLCKSLSVTVRGSSFEDAKKNMAGE
Ga0097621_1002447352	3300006237	Miscanthus Rhizosphere	MTSEIVNLVVIAGIPMDCDFWSEDDGWRGLCQRLSVRVSGDSFEDAKKNMATELQ
Ga0063829_14364802	3300006860	Peatlands Soil	IMTSQVVTLEVIVSVPIDCDFWAEDDGWKGLCKSLSVRVT*
Ga0066793_105426892	3300009029	Prmafrost Soil	MTSEVVNLAVTASIPIDCDFWSEDDGWKGKCKSLSVTVRGSSFEDAKKNMAGELQ
Ga0105247_112264932	3300009101	Switchgrass Rhizosphere	MTSQAVNLEVTVSVPIDCDFWSEDDGWKGVCKSLSFTVRGSSFEDAK
Ga0116222_13598891	3300009521	Peatlands Soil	MTSQIVNLQVTASIPIDCDFWSKDDGWQGLCKSPSVTVHGSSFEDAKK
Ga0116221_12522532	3300009523	Peatlands Soil	MTSQIVNLQVTASIPIDCDFWSKDDGWQGLCKSPSVTVHGSSFEDAKKNMATELQ
Ga0116220_105864802	3300009525	Peatlands Soil	MTSQVVTLEVIVSVPIDCDFWAEDDGWKGLCKSLSVTVRGSSFEDAKKNMAGELQ
Ga0116133_10045098	3300009623	Peatland	MTSQVVKLQVTASVPIDCDFWSEDDGWKGLCKSLSVTVSGSSFEDAKK
Ga0116115_11262862	3300009631	Peatland	MTSQVVNLQVTASVPIDCDFWSEDDGWKGLCKSLSVTVS
Ga0116120_12534181	3300009641	Peatland	MTSQVVNLQVTASIPIDCDFWSEDDSWKGLCKSLSVTVRDSSF
Ga0116121_12591821	3300009644	Peatland	MAPEVVSLQVTASIPIECDFWPEDDGWKGFCNSQSVTVRGSSFEDAKKNMATELQA
Ga0116216_109652212	3300009698	Peatlands Soil	MTFQAVNLLVTASIPMDCDFWPEGDEWKGLCKSLSVTVHGSSFEDAKKNMATELQVHIE
Ga0116223_106007702	3300009839	Peatlands Soil	MTSQVVNLAVTASIAIDCDFWSEDDGGKGLCKSLAVTVRGSSFEDAKK
Ga0134128_114391891	3300010373	Terrestrial Soil	MTSQVVNLQVTANLPIDCEFWPEDDGWQGLCKSPSVTVQGS
Ga0134128_120900431	3300010373	Terrestrial Soil	MTSEIVKLEVSASIPIECEFWSEDDGWKGLSRSPEVTVRGSSFEDAKK
Ga0136449_1036583401	3300010379	Peatlands Soil	MTSQVVALKVIASIPIDCDFWSEDDGWKGLCKSLSVTVHGSSFEDAKKNMAGELQVHIER
Ga0150983_121781433	3300011120	Forest Soil	MTFQVVSLPVSTSIPIDCDFSPEDDGWKGFCKSLSLTVHGSSFENAKKN
Ga0150983_145727672	3300011120	Forest Soil	MTSQIVSLPVTASIPIGCDFWSEDDGWKGLCKCPSITV
Ga0150983_152813252	3300011120	Forest Soil	MTSQIVKLEVSASIPIECEFWSENDGWKGLSRNPAVTVRGSSFEDAKKN
Ga0137380_112689752	3300012206	Vadose Zone Soil	MTSQVVSLEVTASIPIDCDFWAEDDGWKGLCKSLSVTVRGSSFEDAKKNMATELQVHIE
Ga0137387_102120732	3300012349	Vadose Zone Soil	MTSQVVSLEVTASIPIDCDFWAEDDGWKGLCKSLSVTVRGSSFEDAKKNMATELQVH
Ga0137386_105487641	3300012351	Vadose Zone Soil	MTSQVVSLEVTASIPIDCDFWAEDDGWKGLCKSLSVTVRGSSFEDAKKNM
Ga0137396_105159822	3300012918	Vadose Zone Soil	MISQIVNLAVTATIPIDCDFWSEDDGWKGCCKSPSVTVNGRNIEDAKKNMATELQTHMISKEFCAQHPK*
Ga0137407_102846031	3300012930	Vadose Zone Soil	MTSQVVSLEVTASIPIDCDFWAEDDGWKGLCRSLRVTVRGSSFENAKKKMEIELQVN
Ga0137407_105693072	3300012930	Vadose Zone Soil	MNSQPVNLQVTAAIPIDCDFWTEDDGWKGLCKSLSVTVRGNSFADAKKNMADELQVHIE
Ga0164308_115783472	3300012985	Soil	MTSEHGTLDVSASIPIDCDFWSEDDGWKGLCRSLSVSVWGSSFEDAKKNM
Ga0181518_100845551	3300014156	Bog	MSSQVVNLQVTASVPINCDFWSEDDGWKGLCKSPSITVRGSSFEDAKKNMAGE
Ga0181521_104944612	3300014158	Bog	MTSEVVNLEVTASIPIDCDFWSEDDGWKGLCKSLSVTVRGSSFEDAKKNMAGELQVHL
Ga0181536_100261566	3300014638	Bog	MTSQVVNLQVTASIPIDCDFWSEDDSWKGLCKSLSVTVRDSSFEDAKKNMATE
Ga0157379_104547762	3300014968	Switchgrass Rhizosphere	MTSQAVKIQVIASVPIECEFWPEDDGWKGLSRSPSATVRGSSFEDAKKNMASEL
Ga0132258_111138203	3300015371	Arabidopsis Rhizosphere	FMTSEHVTLDVSASIPIDRDFWSEDDGCKGLCRSLSVSVWGSSFEDAKKKMAGE*
Ga0132258_117995534	3300015371	Arabidopsis Rhizosphere	MTSEVVTLEVMATIPISCDFWSQDDGWQGLCKSLSLTVRGSSFEDAKKNMADE
Ga0132258_132112072	3300015371	Arabidopsis Rhizosphere	MTSQVVNLPVTASIPIDCDFWSEDDGWKGLCNNPAVTVRGSSFEDAKKNMASE
Ga0132257_10000465113	3300015373	Arabidopsis Rhizosphere	MTSEHVTLDVSASIPIDRDFWSEDDGWKGLCRSLSVSVWGSSFEDAKKNMAGE*
Ga0132255_1000153049	3300015374	Arabidopsis Rhizosphere	MTSEHVTLDVSASIPIDRDFWSEDDGCKGLCRSLSVSVWGSSFEDAKKKMAGE*
Ga0187877_11382571	3300017931	Peatland	MTSQVVNLQVTASVPIDCDFWSEDDGWKGLCKSLSVTVSGSSF
Ga0187801_102770702	3300017933	Freshwater Sediment	MDSQAVNLQVTASVPIDCEFWPEDDGWKGRCKKPSVTVRGSSFEDAKKNMATELQVH
Ga0187853_101313314	3300017940	Peatland	MTSEVVNLEVTASIPIDCDFWSEDDGWKGLCKSLSVTVRGS
Ga0187853_102518601	3300017940	Peatland	MTSQVVKLQVTASVPIDCDFWSEDDGWKGLCKSLSVTVSGSSFEDAKKNMADELQV
Ga0187888_12308562	3300018008	Peatland	MTSEVVNLEVTASIPIDCDFWSEDDGWKGKCKSLSVTVRGSSFEDAKKNMAGEL
Ga0187888_12637932	3300018008	Peatland	MTSEVVNLEVTASIPIDCDFWSEDDGWKGLCKSLSVTVRGSSFEDAKKNMAGEL
Ga0187884_100416984	3300018009	Peatland	MTSQVVKLQVTASVPIDCDFWSEDDGWKGLCKSLSVTVSGS
Ga0187860_13360502	3300018014	Peatland	MTSQVVNLQVTASVPIDCDFWSEDDGWKGLCKSLSVTVSG
Ga0187872_104490852	3300018017	Peatland	MTSQVVKLQVTASVPIDCDFWSEDDGWKGLCKSLSVTVSGSSFEDAKKN
Ga0187874_100916283	3300018019	Peatland	MTSQVVKLQVTASVPIDCDFWSEDDGWKGLCKSLSVTVSGSSFEDAKKNMAD
Ga0187881_102794831	3300018024	Peatland	MTSQVVNLQVTASIPIDCDFWSEDDSWKGLCKSLSVTVRDSSFEDAKKNMATELQV
Ga0187867_103578902	3300018033	Peatland	MTSQVVSLQVIASVPVDCDFWSEDDGWKGLCKSLSVTVSGSSF
Ga0187862_100099409	3300018040	Peatland	MTSQVVKLQVTASVPIDCDFWSEDDGWKGLCKSLSVTVSGSSFEDAKKNMADEL
Ga0187887_108251502	3300018043	Peatland	MASQVVSLEVTASVPIDCGFWSEDDGWKGFCKSLSITVSGSSFEDAKKNMA
Ga0187858_108316401	3300018057	Peatland	MASQVVRLLVTASVPIECDFWAEDHGWTGLCKSPLVTV
Ga0182025_10483192	3300019786	Permafrost	MTSQIVNLQVAASIPIDCDFWPEDDGWKGLCKSLPVTVGGSSFEDAKKNMATE
Ga0182025_10900781	3300019786	Permafrost	MTSQIVNLQVAASIPIDCDFWPEDDGWKGLCKSLPVTVGGSSFEDAKNEDA
Ga0193722_10418992	3300019877	Soil	MTSQVVNLQVTASIPIECEFWSEDDGWKGLSRSLSVTVRGSSFEDAKKI
Ga0210399_101584481	3300020581	Soil	MTFQVVSLLVSTSIPIDCDFSPEDDGWKGFCKSLSLTVHGSSFENAKKNIATELQV
Ga0210401_112059441	3300020583	Soil	MTSQIVKLEVSASIPIECEFWSEDDGWKGLSRNPAVTVRG
Ga0215015_103305021	3300021046	Soil	MSSAGVNLRVAASIPIDCDFWSEDDGWKGLRKGPSVTVRGNSFEDAKKNMAV
Ga0210400_107404792	3300021170	Soil	MISQIVNLAVTATIPIDCDFWSEDDGWKACCKSPSVTVNGRDIEDAKKN
Ga0210388_105726491	3300021181	Soil	MTFQVVSLPVSTSIPIDCDFSPEDDGWKGFCKSLSLTVHGSSFENAK
Ga0210393_105296462	3300021401	Soil	MPSQVVNLQVIASIPVACDFWSEDDGWKGLCKNPSVVVRGSSFEDAK
Ga0210387_105235902	3300021405	Soil	MNSEVVNLEVTASIPIDCDFWSEDDGWKGLCKSLPVTVHGSSFEDAKKNMAGELKVH
Ga0210394_111799251	3300021420	Soil	MTSQVVHLQVTASLPIDCDFWSEDDGWKGLCKSPAITVRGTSFEDAKKNMAAELQAHIEK
Ga0210384_106723932	3300021432	Soil	DCDFWSEDDGWKACCKSPSVTVNGRDIEDAKKNMATELQTRIERILRPAC
Ga0210398_103893332	3300021477	Soil	MTSQVVSLQVTASIPIDCDFWSEDDGWKGLCKSPS
Ga0210410_106408834	3300021479	Soil	MTSQVVNLQVTASIPIDCDFWSEDDGWKGLCKSLSVTVRG
Ga0210410_113489882	3300021479	Soil	MTFQVVSLPVSASIPINCDFSPEDDGWKGFCKSLSVTVHGSSFEN
Ga0207666_10774461	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MTSQAVKIQVIASVPIECEFWPEDDGWKGLSRSPSATVRGSSFEDAKKNMASELQAQIEA
Ga0207656_101542704	3300025321	Corn Rhizosphere	MTSEIVNLEVTASIPMDCDFWSEDGAWKGFCQQLSVTVNGSSFEDAKKNMATEIQV
Ga0208039_10408131	3300025454	Peatland	MTSQVVNLQVTASVPIDCDFWSEDDGWKGLCKSLSVTVSGSSFEDAKKNMA
Ga0208076_10718402	3300025464	Arctic Peat Soil	MTSQIVTLKVTTNIAIDCDFWSEDDGWKGLCKNPSVTVRGSSFEDAKKNMAAELQ
Ga0208190_10033451	3300025473	Peatland	MTSQVVNLQVTASVPIDCDFWSEDDGWKGLCKSLSVTVSGSSFE
Ga0207926_10507462	3300025619	Arctic Peat Soil	MTSQMVNLQVTASIPIDCDFWPEDDGWKGLCKSLAVTVRGSSFENAKKNMASEL
Ga0207642_103107712	3300025899	Miscanthus Rhizosphere	MTSQAVKIQVIASVPIECEFWPEDDGWKGLSRSPSATVRGSSF
Ga0207699_111703661	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTFQVVSLPVSTSIPIDCDFSPEDDGWKGFCKSLSL
Ga0207705_114166522	3300025909	Corn Rhizosphere	MTSQAVNLEVTVSVPIDCDFWSEDDGWKGVCKSLSFTVRGSSFEDAKKNMAGELQ
Ga0207693_114429911	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTFQVVSLPVSTSIPIDCDFSPEDDGWKGFCKSLSLTVHGSSFE
Ga0207663_101704651	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTSEVVTLEVMATIPIACDFWSKDDGWQGLCKSLSLTVRGSSFEDAKKNMAGELQVYIE
Ga0207690_104336721	3300025932	Corn Rhizosphere	MTSQAVNLEVTVSVPIDCDFWSEDDGWKGVCKSLSFTVRGSS
Ga0207708_116301951	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTSEIVNLEVTASIPMDCDFWSEDGAWKGFCQQLSVTV
Ga0209890_102299322	3300026291	Soil	MTSQVVNLQVTASVPMDCDFWSEDDGWKGLCKSLSVTVSGGSFEDAKKNMATEL
Ga0209219_11747271	3300027565	Forest Soil	MTSPVVNLQVTASIPIDCDFWSEDDGWKGLCKSPSVTVRGSSFEDAKKNMATELQAGI
Ga0209773_104889192	3300027829	Bog Forest Soil	MTSQVVKLKVAAAIPIDCDFWSEDDGWKGLCKSLSISVRGSSFEDAKKNMADGLQ
Ga0209693_106243991	3300027855	Soil	MTSQIVKLEVSASIPIECEFWSEDDGWKGLSRSPAVTVRGSSFEDAKKNMATKLQ
Ga0209701_103721531	3300027862	Vadose Zone Soil	MNSQPVNLQVTAAIPIDCDFWTEDDGWKGLCKSLSVTVRGNSFEDAKKNMAGELQ
Ga0209590_102837082	3300027882	Vadose Zone Soil	MTSQVVSLEVTASIPIDCDFWAEDDGWKGLCKSLSVTVRGSSFEDAKKNMATELQVHI
Ga0209624_110981361	3300027895	Forest Soil	MTSEVVNLEVTASIPIDCDFWSEDDAWKGKCKSLSITIRGSSF
Ga0265356_10248743	3300028017	Rhizosphere	VTMPSQMVNLPVNASIPIDRDFWSDDDGRKALCKSLSVTVH
Ga0137415_100544262	3300028536	Vadose Zone Soil	MISQIVNLAVTATIPIDCDFWSEDDGWKGCCKSPSVTVNGRNIEDAKKNMATELQTHMISKEFCAQHPK
Ga0302223_101112622	3300028781	Palsa	MTSQIVNLQVAASIPIDCDFWSEDDGWKGLCKSLPVTVGGSSFEDAKKNMAT
Ga0311368_101440391	3300029882	Palsa	MTSQIVNLPVTASIPINCDFWSEDDGWKGLCKSPSVAVRGSSFEDAKKNMAAELQAQI
Ga0311352_114452111	3300029944	Palsa	MTSQIVNLPVTASIPINCDFWSEDDGWKGLCKSPSVTVRGGSFEDAKKNMAAELKAQ
Ga0311339_102425211	3300029999	Palsa	MTSQVVNLEVTASIPIDCDFWSENGGWKGLCKSLSVTVNGTSFEDAKKNMAGELQVYIEELR
Ga0302179_101622363	3300030058	Palsa	MTSQVVNLEVTASIPIDCDFWSENGGWKGLCKSLSVTVNGTSFEDAKKNMAGE
Ga0310039_101672853	3300030706	Peatlands Soil	MTSQIVNLQVTASIPIDCDFWSKDDGWQGLCKSPSVTVHGSS
Ga0310038_100029871	3300030707	Peatlands Soil	MDSQAVKLQVTASVPIDCEFWPEDDGWKGLCKKPSVTVRGSSFEDAKKNMATELQVH
Ga0265765_10652952	3300030879	Soil	MPSQMVNLQVNASIPIDCDFWSDDEGWKGLCKSLTVTV
Ga0170824_1173605551	3300031231	Forest Soil	MTSQVVALEVIASIPIDCDFWSEDDVWKGLCKSLSVTVHGSSFEDAKKNMAGELQVHIER
Ga0302323_1011378023	3300031232	Fen	MSSEVVTLEVIASIPVKCDFWSEDDGWKGLCRSLSVTVG
Ga0302325_105104281	3300031234	Palsa	MTSPIVSLQVTASIPIDCDFWSEDDAWKGLCKSPPVTVRGSSFEDAKKNMA
Ga0302324_1004666821	3300031236	Palsa	MTSPIVSLQVTASIPIDCDFWSEDDAWKGLCKSPPVTVRGSSFEDAKKNMASE
Ga0310686_1058711121	3300031708	Soil	MTSQVVNLPVSASIPIDCDFWAEDDGWKGLCKTLSVTVHGSSFEDAK
Ga0310686_1090662421	3300031708	Soil	MTSQVVSLQVAASIPIDCDFWSEGDGWKGLCKNPPVTVRGS
Ga0310813_119937202	3300031716	Soil	MTSQVVNLQVTANLPIDCEFWPEDDGWQGLCKSPS
Ga0307469_103082111	3300031720	Hardwood Forest Soil	MTSEVVNLEVIASIPIDCDFWSEDDGWKGLCKSLSV
Ga0311301_119601591	3300032160	Peatlands Soil	MTSQVVNLQVTASVPIDCDFWSEDHGWKGLCKSLSVTVSGSSFEDARRI
Ga0348332_135890602	3300032515	Plant Litter	MTSEVVNLQVTASVPIECDFWSEDDGWKGLCKSLSVTAGG
Ga0335079_108968762	3300032783	Soil	MTSHVVNLQVTASIPIDCDFWSEDDGWKGLCKSLPLRVDGSSFEDAKKNMATQLQMHIE
Ga0310810_108118251	3300033412	Soil	MTSQAVNLEVTVSVPIDCDFWSEDDGWKGVCKSLSFTVRGSSFEDAKKNMAGELQV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061938

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences