Metagenome / Metatranscriptome Family F062037

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062037
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	45 residues
Representative Sequence	PGDDLEIIEMFKASAADDRLGVPVRLDGDEIYYAYPVAILAATRPA
Number of Associated Samples	106
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.76 %
% of genes near scaffold ends (potentially truncated)	98.47 %
% of genes from short scaffolds (< 2000 bps)	93.13 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.313 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.511 % of family members)
Environment Ontology (ENVO)	Unclassified (41.985 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.328 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.92% β-sheet: 10.81% Coil/Unstructured: 70.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF13279	4HBT_2	76.34
PF00330	Aconitase	6.87
PF00005	ABC_tran	3.05
PF02646	RmuC	2.29
PF03853	YjeF_N	2.29
PF00563	EAL	1.53
PF13432	TPR_16	0.76
PF13181	TPR_8	0.76
PF12399	BCA_ABC_TP_C	0.76
PF02668	TauD	0.76
PF00903	Glyoxalase	0.76
PF04166	PdxA	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0062	NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domain	Nucleotide transport and metabolism [F]	2.29
COG1322	DNA anti-recombination protein (rearrangement mutator) RmuC	Replication, recombination and repair [L]	2.29
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	1.53
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	1.53
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	1.53
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	1.53
COG1995	4-hydroxy-L-threonine phosphate dehydrogenase PdxA	Coenzyme transport and metabolism [H]	0.76
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.31 %
Unclassified	root	N/A	10.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.31 %
Unclassified	root	N/A	10.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.31 %
Unclassified	root	N/A	10.69 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	83.21 %
Unclassified	root	N/A	10.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	75.57 %
Unclassified	root	N/A	10.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.29 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.53 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.69 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.05 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.29 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.29 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.53 %
SAR202 cluster	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.29 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	1.53 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples	0.76 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.29 %
pseudomallei group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group	1.53 %
uncultured Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	0.76 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.29 %
Burkholderia pseudomallei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	1.53 %
uncultured Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	0.76 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	0.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10218647	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300004092\|Ga0062389_100830471	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300004152\|Ga0062386_101579639	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300005434\|Ga0070709_11648202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300005436\|Ga0070713_101880931	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005556\|Ga0066707_10705988	All Organisms → cellular organisms → Bacteria → Proteobacteria	632	Open in IMG/M
3300005764\|Ga0066903_103020114	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300005764\|Ga0066903_107469984	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300006175\|Ga0070712_101316578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300006854\|Ga0075425_102665131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300009038\|Ga0099829_10989597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300009090\|Ga0099827_11129809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300009545\|Ga0105237_11500028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	681	Open in IMG/M
3300009792\|Ga0126374_10323787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1045	Open in IMG/M
3300010046\|Ga0126384_11164581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	710	Open in IMG/M
3300010048\|Ga0126373_10714438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1061	Open in IMG/M
3300010048\|Ga0126373_10928998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	934	Open in IMG/M
3300010048\|Ga0126373_13227258	Not Available	508	Open in IMG/M
3300010358\|Ga0126370_11491766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
3300010359\|Ga0126376_10964406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	849	Open in IMG/M
3300010360\|Ga0126372_11227023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	775	Open in IMG/M
3300010361\|Ga0126378_11566573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	748	Open in IMG/M
3300010361\|Ga0126378_12119818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300010362\|Ga0126377_12532464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300010376\|Ga0126381_101615208	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300010400\|Ga0134122_11903201	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300012096\|Ga0137389_10801716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	809	Open in IMG/M
3300012202\|Ga0137363_10476910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1046	Open in IMG/M
3300012205\|Ga0137362_11299061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300012208\|Ga0137376_10481162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1077	Open in IMG/M
3300012208\|Ga0137376_11205073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300012211\|Ga0137377_11512780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300012212\|Ga0150985_119607763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300012361\|Ga0137360_10049903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3012	Open in IMG/M
3300012361\|Ga0137360_11254603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300012925\|Ga0137419_11286107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300012971\|Ga0126369_11922617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	680	Open in IMG/M
3300012971\|Ga0126369_11943059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300012971\|Ga0126369_13132277	Not Available	542	Open in IMG/M
3300014501\|Ga0182024_10754232	Not Available	1193	Open in IMG/M
3300014501\|Ga0182024_11794536	Not Available	686	Open in IMG/M
3300015357\|Ga0134072_10241612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300016319\|Ga0182033_12028304	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300016319\|Ga0182033_12195784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300016341\|Ga0182035_10607761	All Organisms → cellular organisms → Bacteria → Proteobacteria	945	Open in IMG/M
3300016357\|Ga0182032_10194972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1537	Open in IMG/M
3300016371\|Ga0182034_11254549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300016404\|Ga0182037_10338265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1222	Open in IMG/M
3300016422\|Ga0182039_12207311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300016445\|Ga0182038_10407653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1141	Open in IMG/M
3300018060\|Ga0187765_10850157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300020579\|Ga0210407_10623315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	840	Open in IMG/M
3300021168\|Ga0210406_10643326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300021171\|Ga0210405_10899051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	673	Open in IMG/M
3300021171\|Ga0210405_11036808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300021178\|Ga0210408_10310682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1257	Open in IMG/M
3300021181\|Ga0210388_11640587	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300021403\|Ga0210397_10484472	Not Available	935	Open in IMG/M
3300021403\|Ga0210397_11090352	Not Available	620	Open in IMG/M
3300021420\|Ga0210394_11273573	Not Available	629	Open in IMG/M
3300021420\|Ga0210394_11320622	Not Available	616	Open in IMG/M
3300021478\|Ga0210402_11833460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300021560\|Ga0126371_12024409	Not Available	693	Open in IMG/M
3300022508\|Ga0222728_1083299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300022529\|Ga0242668_1145886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300022530\|Ga0242658_1073488	Not Available	772	Open in IMG/M
3300022531\|Ga0242660_1101942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	703	Open in IMG/M
3300024288\|Ga0179589_10377643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	647	Open in IMG/M
3300025916\|Ga0207663_11284492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300026490\|Ga0257153_1107546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300026557\|Ga0179587_10020833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3536	Open in IMG/M
3300027109\|Ga0208603_1026394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	920	Open in IMG/M
3300027783\|Ga0209448_10028888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1848	Open in IMG/M
3300027903\|Ga0209488_11134216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300029636\|Ga0222749_10212856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	970	Open in IMG/M
3300029943\|Ga0311340_10993643	Not Available	690	Open in IMG/M
3300031446\|Ga0170820_11131928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300031474\|Ga0170818_115515812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300031525\|Ga0302326_12812761	Not Available	601	Open in IMG/M
3300031543\|Ga0318516_10543265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300031545\|Ga0318541_10686529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300031546\|Ga0318538_10223078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1009	Open in IMG/M
3300031561\|Ga0318528_10060835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1928	Open in IMG/M
3300031564\|Ga0318573_10765309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300031679\|Ga0318561_10627379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300031680\|Ga0318574_10511350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	704	Open in IMG/M
3300031680\|Ga0318574_10878543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300031681\|Ga0318572_10059926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2073	Open in IMG/M
3300031708\|Ga0310686_118470182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300031713\|Ga0318496_10452577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	710	Open in IMG/M
3300031723\|Ga0318493_10517876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	660	Open in IMG/M
3300031744\|Ga0306918_10354491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1138	Open in IMG/M
3300031744\|Ga0306918_10652578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	824	Open in IMG/M
3300031747\|Ga0318502_10008624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4517	Open in IMG/M
3300031747\|Ga0318502_10534320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	704	Open in IMG/M
3300031748\|Ga0318492_10791997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300031754\|Ga0307475_10291852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1308	Open in IMG/M
3300031754\|Ga0307475_10464942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1016	Open in IMG/M
3300031763\|Ga0318537_10002621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5655	Open in IMG/M
3300031763\|Ga0318537_10181119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	785	Open in IMG/M
3300031765\|Ga0318554_10588274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300031765\|Ga0318554_10603927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300031770\|Ga0318521_10281687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	976	Open in IMG/M
3300031771\|Ga0318546_10150700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	1567	Open in IMG/M
3300031778\|Ga0318498_10306167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300031782\|Ga0318552_10324180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	784	Open in IMG/M
3300031782\|Ga0318552_10502534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	619	Open in IMG/M
3300031795\|Ga0318557_10110300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1223	Open in IMG/M
3300031797\|Ga0318550_10112019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1293	Open in IMG/M
3300031835\|Ga0318517_10464740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300031845\|Ga0318511_10561925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300031880\|Ga0318544_10073432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1265	Open in IMG/M
3300031893\|Ga0318536_10268657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	866	Open in IMG/M
3300031897\|Ga0318520_10033934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2575	Open in IMG/M
3300031910\|Ga0306923_10177836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2430	Open in IMG/M
3300031910\|Ga0306923_11988906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300031912\|Ga0306921_11451626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	752	Open in IMG/M
3300031945\|Ga0310913_10658962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300031954\|Ga0306926_12294754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300032025\|Ga0318507_10137484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300032025\|Ga0318507_10313106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300032039\|Ga0318559_10423891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	621	Open in IMG/M
3300032043\|Ga0318556_10380277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	739	Open in IMG/M
3300032044\|Ga0318558_10013286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3169	Open in IMG/M
3300032044\|Ga0318558_10292836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	804	Open in IMG/M
3300032044\|Ga0318558_10305188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	787	Open in IMG/M
3300032052\|Ga0318506_10307754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	703	Open in IMG/M
3300032052\|Ga0318506_10512646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300032261\|Ga0306920_100495411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1813	Open in IMG/M
3300032783\|Ga0335079_11687227	Not Available	620	Open in IMG/M
3300032895\|Ga0335074_10217018	Not Available	2303	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.71%
Host-Associated	Host-Associated	2.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.42%
Aquatic	Environmental → Aquatic	2.29%
Plants	Host-Associated → Plants	2.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.89%
Freshwater	Environmental → Aquatic → Freshwater	2.29%
Peat	Environmental → Terrestrial → Peat	1.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.97%
Loam	Environmental → Terrestrial → Soil → Loam	6.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	58.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.29%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.29%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.05%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.53%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.53%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_102186472	3300001867	Forest Soil	FPEPGDDAKIVELFKASAADDRLGVPVHIEGEQIHYAYPVAILAAQRPLQ*
Ga0062389_1008304711	3300004092	Bog Forest Soil	SFPDPGDDVKIIEMFAASAEDDRLGIPVRRVGERIEYAYPVAILVAELD*
Ga0062386_1015796391	3300004152	Bog Forest Soil	DAKIIAMFRASAADGRLGVPVRLDGDEIHYAYPVAILAAECPAG*
Ga0070709_116482021	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	DDAKIIELFKASAADGRLGIPVHIEGERIHYAYRVAILAAQLPAQ*
Ga0070713_1018809312	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	KIIELFKASAADDRLGLPVRIEGERIHYAYPVAILAAQRPAQ*
Ga0066707_107059881	3300005556	Soil	NPGDDVRIIEMFRASAADDRLGVPVRLDGDEIYYAYPVAILAATRPA*
Ga0066903_1030201141	3300005764	Tropical Forest Soil	RSTVSSLLARSFPNPGDDVKIAEMFKASAKDDRLGVPVVIDAEEIYLGYPVAILAAQRPVQ*
Ga0066903_1074699842	3300005764	Tropical Forest Soil	LLARSFPNPGDDVKIIEMFAASAKDDRLGIPVQQDGERINYAYRVAILAANTLSLRGA*
Ga0070712_1013165781	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SAADGRLGIPVHIEGERIHYAYRVAILAAQLPAQ*
Ga0075425_1026651312	3300006854	Populus Rhizosphere	LFRGSAVDDRLGIPIRIVGETIHYAYPVTILAAQRSAA*
Ga0099829_109895972	3300009038	Vadose Zone Soil	EIKIIELFKAAATDDRLGVPVQIEADKIHYAYPVTILSAQHPAQ*
Ga0099827_111298091	3300009090	Vadose Zone Soil	RSFPNPGDDLKIIEMFRASAADDHLGVPVRVDGDDIYYAYPVAILATSRPAR*
Ga0105237_115000281	3300009545	Corn Rhizosphere	NPGDDVKIIEMFAASAEDDRLGIPVRRDGDRIDYAYPIAILAAERS*
Ga0126374_103237873	3300009792	Tropical Forest Soil	RSFPNPGDDIKIIEMFKASAADDRLGVPVRLDADNIYYAYPVAILAAMRPS*
Ga0126384_111645813	3300010046	Tropical Forest Soil	EPGDDIKIVELFRASAADDRLGVPVHLEAEKIHYAYPVAILAAERPSA*
Ga0126373_107144381	3300010048	Tropical Forest Soil	EMFKASAKDDRLGVPVVIDAEEIYLGYPVAILAAQRPVQ*
Ga0126373_109289981	3300010048	Tropical Forest Soil	DLEIIEMFKASAADDRLGVPVRLDEDEIYYAYPVAILAATRPA*
Ga0126373_132272582	3300010048	Tropical Forest Soil	NPGDDVKIIEMFAASAEDDRLGIPIRREGERIEYAYRVAILAAQR*
Ga0126370_114917661	3300010358	Tropical Forest Soil	PGDDIKIVELFRASAVDDRLGVPVHLDAEKIHYAYPVAILAAERPSA*
Ga0126376_109644063	3300010359	Tropical Forest Soil	DVKIVEIFKASAVDDRLGIPVRIEGEKIHYAYPVTILAAQHPAR*
Ga0126372_112270233	3300010360	Tropical Forest Soil	SFPNPGDDVKIIEMFTASAADDRLGVPVRLDNNEIFYAYPVAILAAARPG*
Ga0126378_115665733	3300010361	Tropical Forest Soil	DVKIVEMFKASARDGRLGIPVHIDAEEIHLAYPVAILSAQRPAQ*
Ga0126378_121198181	3300010361	Tropical Forest Soil	LARSFPNPGDDVKIAEMFKASAKDDRLGVPVVTDADEIHLAYPVAILAAQRPVQ*
Ga0126377_125324641	3300010362	Tropical Forest Soil	DVKIVEIFKASAVDDRLGIPVRIEGEKIHYAYPVTILAAQRPAR*
Ga0126381_1016152083	3300010376	Tropical Forest Soil	FKRSAVDDRLGIPIEVDGETIRYAYPVTILAARRPSA*
Ga0134122_119032011	3300010400	Terrestrial Soil	LARSFPNPGDDVKIIEMYAASAEDGRLGIPVRRDGERIDYAFPIAILASTVIARG*
Ga0137389_108017163	3300012096	Vadose Zone Soil	VKIVEMFRASAIDDRLGIPVRVEAETIRYAYPVTILASQRPAA*
Ga0137363_104769104	3300012202	Vadose Zone Soil	FPNPGDELKIIEMFRGSATDDRLGIPVRLDGDRINYVYPVTILAAERPYR*
Ga0137362_112990612	3300012205	Vadose Zone Soil	ARSFPNPGDDVKIVEMFRASAIDDRLGIPVRVEADTIRYAYPVTILASQRPAV*
Ga0137376_104811623	3300012208	Vadose Zone Soil	LLARSFPNPGDDLKIIEMFKASAADDRLGVPVRLDANNIYYAYPVAILAATRPA*
Ga0137376_112050732	3300012208	Vadose Zone Soil	FPEPGDDAKMIELFKASASDGRLGIPVRIEGDQIHYAYPVAILAAQRPAK*
Ga0137377_115127801	3300012211	Vadose Zone Soil	PGDDLEIIEMFKASAADDRLGVPVRLDGDEIYYAYPVAILAATRPA*
Ga0150985_1196077631	3300012212	Avena Fatua Rhizosphere	IVEMFKTSAADDRLGIPVRIDGDKIHYAYPVTILAAQRPTR*
Ga0137360_100499036	3300012361	Vadose Zone Soil	MGCGGPGDDLKIIEMFKASAADDRLGVPVRLDGDEIYYAYPVAILAATRPG*
Ga0137360_112546031	3300012361	Vadose Zone Soil	EMFKASAADDRLGVPVRLDGDEIYYAYPVAILAATRPA*
Ga0137419_112861072	3300012925	Vadose Zone Soil	NPGDHLKIIEMFKAAAADDRLGVPVRLDGDEICYAYPVAILAATRPA*
Ga0126369_119226171	3300012971	Tropical Forest Soil	GDDVKIAEVFKASARDDRLGVPVVIDADEIHLAYPVAILAAKRSD*
Ga0126369_119430591	3300012971	Tropical Forest Soil	ARSFPNPGDDLKIIEMFKASAADDRLGVPVRLDADNIYYAYPVAILAAMRPS*
Ga0126369_131322772	3300012971	Tropical Forest Soil	RASASDDSLGIPVWLDGEVIHYAYPVAICAAVRP*
Ga0182024_107542322	3300014501	Permafrost	DDVKITEMFRKSASDDHLGIPVRVEGETIHYAYPVAILAARNP*
Ga0182024_117945362	3300014501	Permafrost	YPNPGDELKIIGMFRASASDDSLGIPVRLDGETIHYAYPVAIVAATRP*
Ga0134072_102416121	3300015357	Grasslands Soil	DDVKIIELFKASAADDRLGVPVRIEGEQIHYAYPVAILAAQRPPQ*
Ga0182033_120283042	3300016319	Soil	FPNPGDDVKIIEMFAASAEDDRLGIPVRRDGDKLNYAYPVAVLAVQLG
Ga0182033_121957842	3300016319	Soil	RASAADNRLGVPVRLDAGEIYYAYPVAILAATRPA
Ga0182035_106077611	3300016341	Soil	PEPGDDAKIVELFKASAADDRLGVPVHIEGEQIHYAYPVAILAAQRPLQ
Ga0182032_101949721	3300016357	Soil	DLKIIEMFKASAADDRLGVPVRIDADRIDYAYPLAILAATRPA
Ga0182034_112545491	3300016371	Soil	VKIIEMFKASAADDRLGVPVRLDAGEIYYAYPVAILAATRPG
Ga0182037_103382651	3300016404	Soil	KASAADDRLGIPIGIDADRIDYAYPVAILAATRPA
Ga0182039_122073112	3300016422	Soil	FPNPGDDVKIIEMFRAAAADDRLGVPVRLDADEIHYAYPVAILAATRPA
Ga0182038_104076533	3300016445	Soil	FPNPGDDIKIVEMFKASAVDDRLGIPVQVDGEKIHYAYPVSILAAQRPRQ
Ga0187765_108501572	3300018060	Tropical Peatland	RSFPNPGDDAKIIEMFKASAADGRLGVPVRLERDEIYYAYPVAILAASRPA
Ga0210407_106233152	3300020579	Soil	MFRASAADDRLGIPIRLDGDRINYAYRVAILAARRG
Ga0210406_106433261	3300021168	Soil	EMFRASAADDHLGVPVRLDGNDIYYAYPVAILAASRPC
Ga0210405_108990511	3300021171	Soil	LARSFPEPGDEVKIIELFRASAADDRLGVPVHLEAEKIHYAYPVAILAAERPAQ
Ga0210405_110368081	3300021171	Soil	EPGDDAKIIELFKASAADGRLGIPVHIEGERIHYAYPVAILAAQLPAQ
Ga0210408_103106823	3300021178	Soil	ETFKASAADDRLGIPVRIDGDKIHYAYPVTILAAQRPTQ
Ga0210388_116405871	3300021181	Soil	DEEKIFAMFRQSASDDSLGIEVLLDGEAIHYAYPVAIVAATRP
Ga0210397_104844722	3300021403	Soil	NPGDDAKIFAMFRQSASDDSLGIPVSLDGEAIHYAYPVAIVAATRP
Ga0210397_110903522	3300021403	Soil	IVAMFRASAADDSLGIPVRLDGEAIHYAYPVAICAAVRP
Ga0210394_112735732	3300021420	Soil	SKIVEMFRTSASDDHLGISVRLDGEAIHYAYPVAIVAATRP
Ga0210394_113206222	3300021420	Soil	PGDDVKIVRMFKASADDDSLGIPVRLEGEAIHYAYPVAIVAATRP
Ga0210402_118334601	3300021478	Soil	SFPARSDDAKIIELFKASAADDRLDVPVRIEGHRIHYAYPVVILAAQRPAQ
Ga0126371_120244092	3300021560	Tropical Forest Soil	LLARSFPNPGDDAKIIEMFAASAKDDRLGIPVRREGERIEYAYRVAILAVDNR
Ga0222728_10832991	3300022508	Soil	GDEAKIIELFKASAADGRLGIPVHIEGERIHYAYPVAILAAQRPAR
Ga0242668_11458862	3300022529	Soil	ELFKASAADDRLGVPVHIEGEQIHYAYPVAILAAQRPLQ
Ga0242658_10734882	3300022530	Soil	SFPNPGDDVKIIEMFAASAEDDRLGIPVLRAGERIEYAYPVAILVAERD
Ga0242660_11019422	3300022531	Soil	DDLKITEMFRASAADDHLGVPVRLDGNDIYYAYPVAILAASRPG
Ga0179589_103776431	3300024288	Vadose Zone Soil	RASAADDRLGMPVRIEGDRIHYAYPVAILAAQRPAQ
Ga0207663_112844922	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	DDAKIIELFKASAADGRLGIPVHIEGERIHYAYPVAILAAQRPAR
Ga0257153_11075461	3300026490	Soil	AKIIELFKASAADGRLGIPVHIEGERIHYAYPVAILAAQRPAR
Ga0179587_100208331	3300026557	Vadose Zone Soil	SLLARSLPNPGDDLAIIEMFKASAADDRLGVPVRLDGDEIYYAYPVAILAATRPA
Ga0208603_10263941	3300027109	Forest Soil	EPGDEAKIIELFKASAADGRLGIPVHIEGERIHYAYPVAILAAQRPAR
Ga0209448_100288881	3300027783	Bog Forest Soil	SFPNPGDDLKIIELFKASAADDRLGVPVRLEADNIYYAYPVVILAATRPA
Ga0209488_111342162	3300027903	Vadose Zone Soil	EMFRASASDDRLGIPVRLDADEIHYAYPVTILAAQRLTR
Ga0222749_102128561	3300029636	Soil	EAKIIELFKASAADGRLGIPVHIEGERIHYAYPVAILAAQLPAQ
Ga0311340_109936431	3300029943	Palsa	SKIIEMFRASASDDSLGIPVRLDGDAIHYAYPVAIVAATRP
Ga0170820_111319281	3300031446	Forest Soil	RSFPNPGDDVKIIEMFKASAADDRLGVPVRLDADEIYYAYPVAILAATRPA
Ga0170818_1155158122	3300031474	Forest Soil	PGLLARSFPNPGDDLKIIETFKASAADDRLGVPVRLEAGEICYAYPVAILAATRPA
Ga0302326_128127612	3300031525	Palsa	PNPGDEAKIIAMFKASAADDSLGIPVRLEGEAIHYAYPVAIVAATRP
Ga0318516_105432652	3300031543	Soil	YELRSTIGSLLARSFPNPGDDLKIVEMFKASALDDRLGIPLRVDAEEIHCAYPVAILAAQRPAQ
Ga0318541_106865292	3300031545	Soil	KASATDDRLGVPVRVDADDIYYAYPVAILAATRPA
Ga0318538_102230781	3300031546	Soil	LKIIEMFKASAADDRLGVPVRINSDTIDYAYPVAILAATRPA
Ga0318528_100608351	3300031561	Soil	FEHFDDSEIVARSFPNPGDDLRIIEMFKASAADDRLGVPVRLDAGEIYYAYPVAILAATRPG
Ga0318573_107653091	3300031564	Soil	GLLARSFPNPGDELKIIEMFKASAADDRLGIPIGIDADRIDYAYPVAILAATRPA
Ga0318561_106273792	3300031679	Soil	FPNPGDDLKIIEMFKASAADDRLGVPVRLDDGTIYYAYPVAVLAATRPA
Ga0318574_105113501	3300031680	Soil	EMFKASAADDRLGVPMRVDADDIYYAYPVAILAATRPA
Ga0318574_108785432	3300031680	Soil	MFKASALDDRLGIPLRVDAEEIHCAYPVAILAAQRPAQ
Ga0318572_100599261	3300031681	Soil	IIEMFKESATDDGLGVPVRVDADNIHYAYPVAILAAARPA
Ga0310686_1184701822	3300031708	Soil	KILELFKASAADDRLGVPVRIEGEWIHYAYPVAILAAQRPAQ
Ga0318496_104525772	3300031713	Soil	RIIEMFKASAADDRLGVPVRLDAGEIYYAYPVAILAATRPG
Ga0318493_105178762	3300031723	Soil	MFKASAADDRLGVPVRLDVDQIYYAYPVAILAATRPAG
Ga0306918_103544913	3300031744	Soil	DVKIIEMFTASAADDRLGVPVRLDNNEIFYAYPVAILAAARPG
Ga0306918_106525783	3300031744	Soil	VEIIEMFKASAADDRLGVPVRVDADDIYYAYPVAILAATRPA
Ga0318502_100086241	3300031747	Soil	VKIIEMFKASAVDGRLGVPVRLDRDEIYYAYPVAILAASRPA
Ga0318502_105343203	3300031747	Soil	FKASAVDDRLGIPVQVDGEKIHYAYPVSILAAQRPRQ
Ga0318492_107919972	3300031748	Soil	GLLARSFPNPGDDLKIIEIFKASAADDRLGVPVRIDVDRIHYAYPVAILTATRPA
Ga0307475_102918521	3300031754	Hardwood Forest Soil	GDDAKIVELFKASAADDRLGVPVHIEGEQIHYAYPVAILAAQRPLQ
Ga0307475_104649424	3300031754	Hardwood Forest Soil	EIFKASAADERLGVPVRLEGSTIYYAYPVVVLAATRPA
Ga0318537_100026211	3300031763	Soil	FKASAADDRLGVPVRLDVDQIYYAYPVAILAATRPAG
Ga0318537_101811192	3300031763	Soil	PGDDAKIVELFKASAADDRLGVPVHIEGEQIHYAYPVAILAAQRPLQ
Ga0318554_105882742	3300031765	Soil	LRSTIGSLLARSFPNPGDDLKIVEMFKASALDDRLGIPLRVDAEEIHCAYPVAILAAQRPAQ
Ga0318554_106039272	3300031765	Soil	FPNPGDDLKIIEMFKASAADDRLGVPVRINSDTIDYAYPVAILAATRPA
Ga0318521_102816874	3300031770	Soil	FKESATDDGLGVPVRVDADNIHYAYPVAILAAARPA
Ga0318546_101507004	3300031771	Soil	KASAADDRLGVPVRLDVDQIYYAYPVAILAATRPAG
Ga0318498_103061671	3300031778	Soil	DVPSLLARSFPNPGDDVKIIEMFKASAVDGRLGVPVRLDRDEIYYAYPVAILAASRPA
Ga0318552_103241803	3300031782	Soil	NPGDDLKIVEMFRASASDDRLGIPVRLDGNKIHYAYPVTILAAQRLSQ
Ga0318552_105025342	3300031782	Soil	SSTIGSLLARSFPNPGDDLKIVEMFKASTLDDRLGIPLRVDAEEIHCAYPVAILAAQRPA
Ga0318557_101103004	3300031795	Soil	PNPGDDLKIIEMFKASAADDRLGVPVRLDDGTIYYAYPVAVLAATRPA
Ga0318550_101120195	3300031797	Soil	FKASAADDRLGIPIGIDADRIDYAYPVAILAATRPA
Ga0318517_104647401	3300031835	Soil	LKIIEMFKESATDDGLGVPVRVDADNIHYAYPVAILAAARPA
Ga0318511_105619251	3300031845	Soil	EIADMFKASARDDRLGVPVVIDADEIHLAYPVAILAAKRPD
Ga0318544_100734321	3300031880	Soil	PSDDLEIIEMFKSSVADDRLGVPVRLDGDQIYYAYPVAILAATRHA
Ga0318536_102686571	3300031893	Soil	DMFKASARDDRLGVPVVIDADEIHLAYPVAILAAKRPD
Ga0318520_100339341	3300031897	Soil	FKASAADDRLGVPVRLDDGTIYYAYPVAVLAATRPA
Ga0306923_101778361	3300031910	Soil	NPGDDLKIIEMFKASAADDRLGVPVRVNSDRIDYAYPVAILAATRPA
Ga0306923_119889062	3300031910	Soil	IAEMFKASARDDRLGVPVLIDANEIHLAYPVTILAAKRPD
Ga0306921_114516261	3300031912	Soil	FPNPGDDAKIIEIFSASAADDRLGIPVERKGPRIEYAYPVVILTAERT
Ga0310913_106589623	3300031945	Soil	MFKASASDDSLGIAVRVEAEEIHFAYPVAILAAQRPAQ
Ga0306926_122947542	3300031954	Soil	SFPNPGDDVKIIEMFRASAADDRLGVPVRLEADNIYYAYPVAILAATRPA
Ga0318507_101374844	3300032025	Soil	PNPGDDVKIIEMFKASAGDDRLGVPVRLDDDRIYYAYPVVVLAATRPA
Ga0318507_103131063	3300032025	Soil	FKASAVDDRLGVPVQVDGEKIHYAYPVSILAAQRPRQ
Ga0318559_104238912	3300032039	Soil	KASAADDRLGVPVRLDDGTIYYAYPVAVLAATRPA
Ga0318556_103802773	3300032043	Soil	VELFKASAADDRLGVPVHIEGEQIHYAYPVAILAAQRPLQ
Ga0318558_100132862	3300032044	Soil	LLARSFPNPGGDVKIIEMFTASAADDRLGVPVRLDNNEIFYAYPVAILAAARPG
Ga0318558_102928361	3300032044	Soil	LKIIEMFKASAADDRLGVPVRLDDGTIYYAYPVAVLAATRPA
Ga0318558_103051881	3300032044	Soil	SFPEPGDDDKIVELFKASAADDRLGIPVRLEADKIQYAYPVAILSVQRPNL
Ga0318506_103077541	3300032052	Soil	IGSLLARSFPNPGDDLKIVEMFKASALDDRLGIPLRVDAEEIHCAYPVAILAAQRPAQ
Ga0318506_105126461	3300032052	Soil	FPNPGDDVKIIEMFKASATDDRLGVPVRLDVDQIYYAYPVAILAATRPAG
Ga0306920_1004954111	3300032261	Soil	GDDIKIVEMFKASAVDDRLGIPVQVDGEKIHYAYPVSILAAQRPRQ
Ga0335079_116872271	3300032783	Soil	MFRQSAKDDSLGIPVSLDGEAIHYAYPVAIVAATRP
Ga0335074_102170181	3300032895	Soil	NPGDEVKIVDMFRASASDDHLGIPVRLDGETIHYAYPVAIVAATRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062037

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences