Metagenome / Metatranscriptome Family F062064

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062064
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	100 residues
Representative Sequence	GYHWGFVYYSMETYTSHQGTLSIELIDTKSRELAWRMFVSVKLIHSDPDKIWKTADSNIKNAFKSYPPSPKDIEAKKQQWAKEDAAKKPSQP
Number of Associated Samples	109
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	6.87 %
% of genes near scaffold ends (potentially truncated)	86.26 %
% of genes from short scaffolds (< 2000 bps)	85.50 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.145 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.137 % of family members)
Environment Ontology (ENVO)	Unclassified (32.824 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.275 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 16.67% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF13590	DUF4136	11.45
PF10011	DUF2254	3.05
PF00128	Alpha-amylase	3.05
PF13505	OMP_b-brl	2.29
PF01594	AI-2E_transport	2.29
PF00939	Na_sulph_symp	1.53
PF07589	PEP-CTERM	1.53
PF00365	PFK	1.53
PF01758	SBF	0.76
PF07995	GSDH	0.76
PF04255	DUF433	0.76
PF03976	PPK2	0.76
PF01432	Peptidase_M3	0.76
PF13620	CarboxypepD_reg	0.76
PF02321	OEP	0.76
PF00872	Transposase_mut	0.76
PF00484	Pro_CA	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	3.05
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	3.05
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	3.05
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	3.05
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	2.29
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	1.53
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	1.53
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	1.53
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.53
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.76
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	0.76
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.76
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.76
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.76
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
All Organisms	root	All Organisms	48.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
cellular organisms	root	All Organisms → cellular organisms	48.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	25.95 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.76 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.69 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.63 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.76 %
Kiritimatiellota	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota	0.76 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.69 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.63 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.76 %
Tichowtungiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Tichowtungiia	0.76 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.69 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.63 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.76 %
Tichowtungiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Tichowtungiia → Tichowtungiales	0.76 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.69 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	3.05 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
Tichowtungiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Tichowtungiia → Tichowtungiales → Tichowtungiaceae	0.76 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.76 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.69 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	3.05 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
Hymenobacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae	0.76 %
Tichowtungia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Tichowtungiia → Tichowtungiales → Tichowtungiaceae → Tichowtungia	0.76 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.69 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	3.05 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
Tichowtungia aerotolerans	species	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Tichowtungiia → Tichowtungiales → Tichowtungiaceae → Tichowtungia → Tichowtungia aerotolerans	0.76 %
Hymenobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	0.76 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.69 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	3.05 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %
Hymenobacter gelipurpurascens	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → Hymenobacter gelipurpurascens	0.76 %
Tichowtungia aerotolerans	species	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Tichowtungiia → Tichowtungiales → Tichowtungiaceae → Tichowtungia → Tichowtungia aerotolerans	0.76 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY01B2GT9	Not Available	528	Open in IMG/M
3300000891\|JGI10214J12806_10773041	All Organisms → cellular organisms → Bacteria → PVC group → Kiritimatiellota → Tichowtungiia → Tichowtungiales → Tichowtungiaceae → Tichowtungia → Tichowtungia aerotolerans	1758	Open in IMG/M
3300000955\|JGI1027J12803_101012713	All Organisms → cellular organisms → Bacteria → Proteobacteria	1308	Open in IMG/M
3300000955\|JGI1027J12803_102793163	Not Available	504	Open in IMG/M
3300000955\|JGI1027J12803_105371452	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300000956\|JGI10216J12902_120807322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300004013\|Ga0055465_10041938	Not Available	1191	Open in IMG/M
3300005295\|Ga0065707_11084703	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → Hymenobacter gelipurpurascens	511	Open in IMG/M
3300005334\|Ga0068869_100145934	Not Available	1831	Open in IMG/M
3300005343\|Ga0070687_101112188	Not Available	578	Open in IMG/M
3300005437\|Ga0070710_10533061	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300005437\|Ga0070710_11058520	Not Available	594	Open in IMG/M
3300005439\|Ga0070711_100200757	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300005457\|Ga0070662_100641148	Not Available	896	Open in IMG/M
3300005459\|Ga0068867_101768119	Not Available	581	Open in IMG/M
3300005466\|Ga0070685_10653612	Not Available	762	Open in IMG/M
3300005536\|Ga0070697_101220380	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	670	Open in IMG/M
3300006174\|Ga0075014_100656757	Not Available	605	Open in IMG/M
3300006175\|Ga0070712_101473026	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300006175\|Ga0070712_101621681	Not Available	566	Open in IMG/M
3300006914\|Ga0075436_101201901	Not Available	572	Open in IMG/M
3300006931\|Ga0097620_100069916	All Organisms → cellular organisms → Bacteria → Acidobacteria	3546	Open in IMG/M
3300007258\|Ga0099793_10153461	All Organisms → cellular organisms → Bacteria → Acidobacteria	1091	Open in IMG/M
3300007265\|Ga0099794_10265725	Not Available	886	Open in IMG/M
3300009176\|Ga0105242_10153892	Not Available	2007	Open in IMG/M
3300009824\|Ga0116219_10240326	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300010046\|Ga0126384_11817303	Not Available	579	Open in IMG/M
3300010048\|Ga0126373_12422228	Not Available	584	Open in IMG/M
3300010360\|Ga0126372_12529402	Not Available	564	Open in IMG/M
3300010366\|Ga0126379_10509954	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300011120\|Ga0150983_16283036	Not Available	517	Open in IMG/M
3300012202\|Ga0137363_10422040	All Organisms → cellular organisms → Bacteria → Acidobacteria	1113	Open in IMG/M
3300012202\|Ga0137363_10792710	Not Available	803	Open in IMG/M
3300012203\|Ga0137399_10079966	All Organisms → cellular organisms → Bacteria → Acidobacteria	2478	Open in IMG/M
3300012203\|Ga0137399_11396117	Not Available	586	Open in IMG/M
3300012361\|Ga0137360_10378443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1190	Open in IMG/M
3300012361\|Ga0137360_11362005	Not Available	612	Open in IMG/M
3300012362\|Ga0137361_10113252	All Organisms → cellular organisms → Bacteria → Acidobacteria	2380	Open in IMG/M
3300012685\|Ga0137397_10026226	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4129	Open in IMG/M
3300012685\|Ga0137397_10226705	Not Available	1391	Open in IMG/M
3300012918\|Ga0137396_10118817	All Organisms → cellular organisms → Bacteria → Acidobacteria	1903	Open in IMG/M
3300012922\|Ga0137394_10636685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300012924\|Ga0137413_10173997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1427	Open in IMG/M
3300012925\|Ga0137419_11375945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300012929\|Ga0137404_12049543	Not Available	534	Open in IMG/M
3300012948\|Ga0126375_12045561	Not Available	507	Open in IMG/M
3300012961\|Ga0164302_10745036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300013296\|Ga0157374_12480035	Not Available	546	Open in IMG/M
3300014164\|Ga0181532_10003974	All Organisms → cellular organisms → Bacteria	13102	Open in IMG/M
3300014164\|Ga0181532_10010457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7268	Open in IMG/M
3300014325\|Ga0163163_12226104	Not Available	607	Open in IMG/M
3300015241\|Ga0137418_10613153	Not Available	851	Open in IMG/M
3300015242\|Ga0137412_10020394	All Organisms → cellular organisms → Bacteria → Proteobacteria	5395	Open in IMG/M
3300015242\|Ga0137412_10067245	All Organisms → cellular organisms → Bacteria	2916	Open in IMG/M
3300015245\|Ga0137409_11411890	Not Available	542	Open in IMG/M
3300015264\|Ga0137403_10136512	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	2431	Open in IMG/M
3300015264\|Ga0137403_10188440	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	2003	Open in IMG/M
3300015372\|Ga0132256_103025335	Not Available	565	Open in IMG/M
3300015374\|Ga0132255_104502456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300016294\|Ga0182041_10391813	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300016319\|Ga0182033_10270079	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300016341\|Ga0182035_10857183	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300016371\|Ga0182034_10974006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300016750\|Ga0181505_11138492	Not Available	674	Open in IMG/M
3300017928\|Ga0187806_1352654	Not Available	527	Open in IMG/M
3300020140\|Ga0179590_1148651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300020140\|Ga0179590_1151185	Not Available	634	Open in IMG/M
3300020140\|Ga0179590_1205579	Not Available	539	Open in IMG/M
3300020580\|Ga0210403_10205311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1617	Open in IMG/M
3300020583\|Ga0210401_11556069	Not Available	518	Open in IMG/M
3300021178\|Ga0210408_11445547	Not Available	516	Open in IMG/M
3300021180\|Ga0210396_10140237	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300021180\|Ga0210396_10191284	All Organisms → cellular organisms → Bacteria → Acidobacteria	1830	Open in IMG/M
3300021405\|Ga0210387_11887624	Not Available	501	Open in IMG/M
3300021420\|Ga0210394_11236011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300021474\|Ga0210390_10809597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300021560\|Ga0126371_12672343	Not Available	605	Open in IMG/M
3300022532\|Ga0242655_10154143	Not Available	675	Open in IMG/M
3300022726\|Ga0242654_10377039	Not Available	539	Open in IMG/M
3300024279\|Ga0247692_1053251	Not Available	628	Open in IMG/M
3300024288\|Ga0179589_10054291	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1518	Open in IMG/M
3300024347\|Ga0179591_1170907	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2823	Open in IMG/M
3300025898\|Ga0207692_10422391	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300025906\|Ga0207699_10229132	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1272	Open in IMG/M
3300025915\|Ga0207693_10433191	All Organisms → cellular organisms → Bacteria → Acidobacteria	1028	Open in IMG/M
3300025915\|Ga0207693_10862673	Not Available	696	Open in IMG/M
3300025915\|Ga0207693_11407265	Not Available	518	Open in IMG/M
3300025918\|Ga0207662_11196390	Not Available	540	Open in IMG/M
3300025932\|Ga0207690_11500484	Not Available	564	Open in IMG/M
3300025942\|Ga0207689_10418117	Not Available	1118	Open in IMG/M
3300025986\|Ga0207658_12037993	Not Available	522	Open in IMG/M
3300026088\|Ga0207641_12349265	Not Available	532	Open in IMG/M
3300026285\|Ga0209438_1017356	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	2408	Open in IMG/M
3300026304\|Ga0209240_1180777	Not Available	639	Open in IMG/M
3300026490\|Ga0257153_1112712	Not Available	536	Open in IMG/M
3300026555\|Ga0179593_1216454	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	2353	Open in IMG/M
3300027381\|Ga0208983_1067612	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300027548\|Ga0209523_1131563	Not Available	515	Open in IMG/M
3300027643\|Ga0209076_1164925	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300027889\|Ga0209380_10671472	Not Available	596	Open in IMG/M
3300028906\|Ga0308309_11087192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300030916\|Ga0075386_11531552	Not Available	665	Open in IMG/M
3300031231\|Ga0170824_113331266	Not Available	816	Open in IMG/M
3300031231\|Ga0170824_128719673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	590	Open in IMG/M
3300031469\|Ga0170819_15979582	Not Available	615	Open in IMG/M
3300031474\|Ga0170818_112162613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300031561\|Ga0318528_10813263	Not Available	500	Open in IMG/M
3300031719\|Ga0306917_10746217	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300031719\|Ga0306917_11259339	Not Available	573	Open in IMG/M
3300031720\|Ga0307469_10120870	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300031720\|Ga0307469_10682350	Not Available	929	Open in IMG/M
3300031720\|Ga0307469_11196467	Not Available	718	Open in IMG/M
3300031720\|Ga0307469_11880543	Not Available	579	Open in IMG/M
3300031744\|Ga0306918_11074214	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300031754\|Ga0307475_10005338	All Organisms → cellular organisms → Bacteria	8062	Open in IMG/M
3300031880\|Ga0318544_10222143	Not Available	730	Open in IMG/M
3300031945\|Ga0310913_10515293	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300031946\|Ga0310910_10007173	All Organisms → cellular organisms → Bacteria → Acidobacteria	6759	Open in IMG/M
3300031947\|Ga0310909_10350439	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300031959\|Ga0318530_10099104	Not Available	1157	Open in IMG/M
3300031962\|Ga0307479_11586510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300032001\|Ga0306922_12363113	Not Available	508	Open in IMG/M
3300032008\|Ga0318562_10080944	Not Available	1823	Open in IMG/M
3300032025\|Ga0318507_10310892	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300032174\|Ga0307470_11098939	Not Available	639	Open in IMG/M
3300032180\|Ga0307471_100014634	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5462	Open in IMG/M
3300032180\|Ga0307471_101920948	Not Available	741	Open in IMG/M
3300032205\|Ga0307472_102067047	Not Available	572	Open in IMG/M
3300032261\|Ga0306920_100792219	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300033290\|Ga0318519_10965136	Not Available	528	Open in IMG/M
3300033405\|Ga0326727_10093952	All Organisms → cellular organisms → Bacteria → Acidobacteria	4020	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.31%
Host-Associated	Host-Associated	10.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.73%
Plants	Host-Associated → Plants	10.69%
Aquatic	Environmental → Aquatic	4.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.58%
Freshwater	Environmental → Aquatic → Freshwater	3.05%
Marine	Environmental → Aquatic → Marine	0.76%
Sediment	Environmental → Aquatic → Sediment	0.76%
Peat	Environmental → Terrestrial → Peat	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.47%
Loam	Environmental → Terrestrial → Soil → Loam	14.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.05%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.29%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.29%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.76%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.29%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.29%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.53%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.76%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.76%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_08111070	2170459010	Grass Soil	VYGPYYGYHWGFIYYSMETSSTHVGTLGIDLIDPHSRDLAWRMLVNVKIFHTEPEKIWKTADSNIKNAFKRYPPSAKEIEEKKQQWAKEDAAKKPSEPQ
JGI10214J12806_107730411	3300000891	Soil	NWGVYGSYYGYHWGSVYYSMDTYTNHQGTLGIELIDEKARDLAWRLFASVRIIQTDPDKIWKTADSNIKNAFKRYPPSPKDIEAKKQQWAREDASKKSSQP*
JGI1027J12803_1010127133	3300000955	Soil	YFGYHWGFVYYSMETYTNHQGTLGIELIDARARELAWRMFVSVKLIHSDSAKIWKTADSNIKNAFKSYPPSPKAVEAKKQQWAKEDAAEKPSQP*
JGI1027J12803_1027931631	3300000955	Soil	WGFIYYSMDTYTNHQGMLGIELIDEKARDLAWRLFAHVRIIQTDPDKIWKTADNNIKNAFKRYPPSPKDIDAKKQQWAKEDASKKPSQP*
JGI1027J12803_1053714521	3300000955	Soil	YFGYHWGFVYYSMETYTNHQGTLGIELIDARARELAWRMFVSVKLIHSDSAKIWKTADGNIKNAFKSYPPSPKAVEAKKQQWAKEDAAKKSSQP*
JGI10216J12902_1208073221	3300000956	Soil	WGFIYASMETSTTHMGTLGIDLIDPHSRDLAWRMLANVKIYHTDSDKIWKTADSNIKNAFKRFPPSPKDIEEKKQQWAKEDAGKKPSQP*
Ga0055465_100419382	3300004013	Natural And Restored Wetlands	PIYESMSYSATRQGTLAIELIEAKTPDLAWRMFATARLIHTEAEKNWKTADENIQKAFKSYPPSPKAIEAKKKQWAKEDAAKKASQP*
Ga0065707_110847031	3300005295	Switchgrass Rhizosphere	VAGSANWGVYGSYYGYHWGFIYYSMDTYTNHQGTLGIELIDEKARDLAWRLFARVRIIQTDPDKIWKTADSNIKNAFKRYPPSSKDIEAKKQQWAKEDASKKSSQP*
Ga0068869_1001459342	3300005334	Miscanthus Rhizosphere	ATNANWGAYGPYYGYHWGFVYYSMDASKTHLGTLGIDLIDPHSRDLAWRMLANVKIFDTDPDKIWKTADSNIKNAFKRYPPSPKEIEEKKQQWAKEDAAKKPCQPQQ*
Ga0070687_1011121882	3300005343	Switchgrass Rhizosphere	FVYYSMDASKTHLGTLGIDLIDPHSRDLAWRMLANVKIFDTDPDKIWKTADSNIKNAFKRYPPSPKEIEEKKQQWAKEDAAKKPCQPQQ*
Ga0070710_105330612	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MDVNVGANTNWGAYGPYVGYHWGPIYNSMDASVTHQGTLSIEFIDPRSHDLAWRMLASVKILHTDPDKIWKTADNNIKDAFKRYPPSPKDIEAKKKQWAKEDTLKTPSQP*
Ga0070710_110585202	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	PYFGYHWGFAYYSMETYTNHQGTLGIELIDARARELAWRMFVSVKLIHSDSAKIWKTADSNIKNAFKSYPPSPKAVEAKKQQWAKEDAAKKPS*
Ga0070711_1002007571	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VFGPYFGYHWGFVYYSMETYTNHQGTLGIELIDARARELAWRMFVSVKLIHSDSAKIWKTADSNIKNAFKSYPPSPKAVEAKKQQWAKEDAAKKSSQP*
Ga0070662_1006411482	3300005457	Corn Rhizosphere	VRYFVASQMGVDLATNANWGAYGPYYGYHWGFVYYSMDASKTHLGTLGIDLIDPHSRDLAWRMLANVKIFDTDPDKIWKTADSNIKNAFKRYPPSPKEIEEKKQQWAKEDAAKKPCQPQQ
Ga0068867_1017681191	3300005459	Miscanthus Rhizosphere	DPDLVVRYFVASQMGVDLATNANWGAYGPYYGYHWGFVYYSMDASKTHLGTLGIDLIDPHSRDLAWRMLANVKIFDTDPDKIWKTADSNIKNAFKRYPPSPKEIEEKKQQWAKEDAAKKPCQPQQ*
Ga0070685_106536121	3300005466	Switchgrass Rhizosphere	YGYHWGFVYYSMDASKTHLGTLGIDLIDPHSRDLAWRMLANVKIFDTDPDKIWKTADSNIKNAFKRYPPSPKEIEEKKQQWAKEDAAKKPCQPQQ*
Ga0070697_1012203802	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	SMETYTNHQGTLGIELIDARTRELAWRMFVSVKLIHSDSAKIWKTADSNIKNAFKSYPPSPKAVEAKKQQWAKEDAAKKSSQP*
Ga0075014_1006567572	3300006174	Watersheds	TYTNHQGTLGIELIDARARELAWRMFVSVKLIHSDSAKIWKTADSNIKKAFKSYPPSPEAVEAKKQQWAKEDAAKKPS*
Ga0070712_1014730262	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VFGPYFGYHWGFAYYSMETYTNHQGTLGIELIDARARELAWRMFVSVKLIHSDSAKIWKTADSNIKNAFKSYPPSPKAVEAKKQQWAKEDAAKKPS*
Ga0070712_1016216811	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	YYSMDTYTNHQGTLGIELIDEKARDLAWRLFARVRIIQTDPDKIWKTADSNIKNAFKRYPPSSKDIEAKKQQWAKEDASKKSSQP*
Ga0075436_1012019011	3300006914	Populus Rhizosphere	YYTMETATTHMGTLGIELINPHSRSLAWRMFAHVKIIHTEPDKIWKTADSNIKNAFRRYPPSAKEIEEKKKQWAKEDAAKKPSQPQ*
Ga0097620_1000699161	3300006931	Switchgrass Rhizosphere	SKTHLGTLGIDLIDPHSRDLAWRMLANVKIFDTDPDKIWKTADSNIKNAFKRYPPSPKEIEEKKQQWAKEDAAKKPCQPQQ*
Ga0099793_101534611	3300007258	Vadose Zone Soil	TNWGAYGPYMGYHWGFVHNSMDASVTHQGTLSIELIDPRSHDLAWRMFASVKILHTDPDKIWKTADRNIKSAFKRYPPSPKDIEAKKKQ*
Ga0099794_102657252	3300007265	Vadose Zone Soil	SMDTYTTHLGTLGIELIQDKARDLAWRMFVSVKITNTDPDKIWKTADSNIKNAFSRYPPSPKDIDAKKQQWAKEDAAKESSQPQ*
Ga0105242_101538921	3300009176	Miscanthus Rhizosphere	YGPYYGYHWGFVYYSMDASKTHLGTLGIDLIDPHSRDLAWRMLANVKIFDTDPDKIWKTADSNIKNAFKRYPPSPKEIEEKKQQWAKEDAAKKPCQPQQ*
Ga0116219_102403261	3300009824	Peatlands Soil	DVNVAASTNWGVYGPYIGYHWGFIYYSMDSSTTHQGTLSIELIDAKSRDLTWRMFASTKIIHTDPDKIWKTADGNIKNAFKHYPPSPKEIETKKQQWAKDNATKKPSQP*
Ga0126384_118173032	3300010046	Tropical Forest Soil	YYGYHWGFVYYSMDYSTTHQGTLGIELIDERARDLAWRMFASVKIIHTDPDKIWKTADNNIRNAFKSYPPSAKDIEAKKQQWSKEDADKNSSSAPR*
Ga0126373_124222281	3300010048	Tropical Forest Soil	NSQKDVNVAGSSNWGVYGPYYGYHWGFVYYSMDYSTTHQGTLGIELIDEKARDLAWRMFASVKIIHTDPDKIWKTADNNIRNAFKSYPPSAKDIEAKKQQWSKEDADKKPSSAPR*
Ga0126372_125294021	3300010360	Tropical Forest Soil	YYSMETYTNHQGTLGIELIDARTRELAWRMFVSVKLIHSDSAKIWKTADSNIKNAFKSYPPSPKAVEAKKQQWAKEDAAQKSSQP*
Ga0126379_105099543	3300010366	Tropical Forest Soil	LVVRYWVNSQKDVNVAGSSNWGVYGPYYGYHWGFIYYSMDYSTTHQGTLGIELIDENARDLAWRMFASVKIIHTDPDKIWKTADSNIRSAFKRYPPSPKDIEAKKQQWSKEEADKKSSNAPR*
Ga0150983_162830361	3300011120	Forest Soil	WGFVYYSMDASKTHLGTLGIDLIDPHSRDLAWRMLANVKIFDTDPDKIWKTADSNIKNAFKRYPPSPKEIEEKKQQWAREDAAKKPSQPHSGQEMMFRQ*
Ga0137363_104220402	3300012202	Vadose Zone Soil	RGDAHIPSNTNASYLWDRTLVVRYWANSQMDVDVAASTNWGAYGPYMGYHWGFVHNSMDASVTHQGTLSIELIDPRSHDLAWRMFASVKILHTDPDKIWKTADRNIKSAFKRYPPSPKDIEAKKKQ*
Ga0137363_107927101	3300012202	Vadose Zone Soil	MDFSTTHKGTLGIELIDEKARDLAWRMFASVKIIHTDPDKIWKTADSNIKNAFKRYPPSAKDSEAKKQQWAKEDAAKKSSQP*
Ga0137399_100799661	3300012203	Vadose Zone Soil	IPSNTNASYLWDRTLVVRYWANSQMDVDVAASTNWGAYGPYMGYHWGFVHNSMDASVTHQGTLSIELIDPRSHDLAWRMFASVKILHTDPDKIWKTADRNIKSAFKRYPPSPKDIEAKKKQ*
Ga0137399_113961171	3300012203	Vadose Zone Soil	RYWVNSEKDFKVAANTNWGVYGPYYGYHWGFVYYSMDTYTTHLGTLGIELIQDKTRDLAWRMFVSVKITNTDPDKIWKTADSNIKNAFSRYPPSPKDIDAKKQQWAKEDAAKESSQH*
Ga0137360_103784432	3300012361	Vadose Zone Soil	MDTYTTHEGTLGIELIAANSRELAWGMFASVKISETDPQKIWKIADGNIKNGSKRFSPSPKDIEAKKQQWAKEGAA*
Ga0137360_113620051	3300012361	Vadose Zone Soil	EKDFNVAANTNWGVYGPYYGYHWGFVYYSMDTYTTHLGTLGIELIQDKARDLAWRMFVSVKIINTDPDKIWKTADSNIKNAFSRYPPSPKDVDAKKQQWAKEDAAKKSSQPQ*
Ga0137361_101132521	3300012362	Vadose Zone Soil	VRYWANSQMDVDVAASTNWGAYGPYMGYHWGFVHNSMDASVTHQGTLSIELIDPRSHDLAWRMFASVKILHTDPDKIWKTADRNIKSAFKRYPPSPKDIEAKKKQ*
Ga0137397_100262263	3300012685	Vadose Zone Soil	LGQQPKDFDVAASTNWGVYGPYYGYHWGFVYYSMDTYTTHEGTLGIELIAANSRELAWRMFASVKISETDPQKIWKIADGNIKNGSKRFSPSPKDIEAKKQQWAKEDAAKKPSQPDH*
Ga0137397_102267052	3300012685	Vadose Zone Soil	MYYSMDTYTTHLGTLGIELIQDKARDLAWRMFVSVKIINTDPDKIWKTADSNIKNAFNSYPPSPKDVDAKKQQWAKEDAAKKSSQPQ*
Ga0137396_101188171	3300012918	Vadose Zone Soil	VTHQGTLSIELIDPRSHDLAWRMFASVKILHTDPDKIWKTADRNIKSAFKRYPPSPKDIEAKKKQWTKEDTLKTPSQP*
Ga0137394_106366852	3300012922	Vadose Zone Soil	VRYWANSQKDFDVAASTNWGVYGPYYGYHWGFVYYSMDTYTTHEGTLGIELIAANSRELAWRMFASVKISETDPQKIWKIADGNIKNGSKRFSPSPKDIEAKKQQWAKEDATKKPSQPHH
Ga0137413_101739971	3300012924	Vadose Zone Soil	NWGVYGPYYGYHWGFMYYSMDTYTTHLGTLGIELIQDKARDLAWRMFVSVKIINTDPDKIWKTADSNIKNAFSRYPPSPKDVDAKKQQWAKEDAAKKSSQPQ*
Ga0137419_113759452	3300012925	Vadose Zone Soil	PYFGYHWGFVYCSMDTYTTHEGTLGIELIAANSRELAWRMFASVKISETDPQKIWKIADGNIKNGSKRISPSPKDIEAKKQQWAKEDATKKPSQPHH*
Ga0137404_120495431	3300012929	Vadose Zone Soil	HLGTLGIELIQDKARDLAWRMFVSVKITNTDPDKIWKTADSNIKNAFSRYPPSPKDIDAKKQQWAKEDAAKESSQH*
Ga0126375_120455611	3300012948	Tropical Forest Soil	VNSQKDVNVAGSSNWGVYGPYYGYHWGFVYYSMDYSTTHQGTLGIELIDEKARDLAWRMFASVKIIHTDPDKIWKTADSNISSAFKRYPPSPKDIEAKKQQWSKEDADKK*
Ga0164302_107450361	3300012961	Soil	RYFVESQMGVDLATSANWGVYGPYYGYHWGFVYYSMDASKTHLGTLGIDLIDPHSRDLAWRMLANVKIFDTDPDKIWKTADSNIKNAFKRYPPSPKEIEEKKQQWAKEDAAKKPSQPR*
Ga0157374_124800351	3300013296	Miscanthus Rhizosphere	GFVYYSMETYTNHQGTLGIELIDARARELAWRMFVSVKLIHSDSAKIWKTADSNIKNAFKSYPPSPQAVEAKKQQWAKEDAAKKSSQP*
Ga0181532_100039746	3300014164	Bog	MESYTNHQGMLGIELIDAKTRGLAWRMFASVKLLHSDPDKIWKTAVNNVKDAFKSYPPSPKAVEAKKKQWAKDDSAKNPSQP*
Ga0181532_100104575	3300014164	Bog	VGVATSTNWGVYGPYFGYHWGFVYYSMESYTNHQGMLGIELIDAQTRGLAWRMFASVKLLHSDPAKIWKTADNNIKEAFRSYPPSPKAVDAKKKQWAKDDSAKKPPQP*
Ga0163163_122261041	3300014325	Switchgrass Rhizosphere	TTHMGTLGIELINPHSRSLAWRMFAHVKIIHTEPDKIWKTADSNIKNAFRRYPPSAKEIEEKKKQWAKEDAAKKPSQPQ*
Ga0137418_106131532	3300015241	Vadose Zone Soil	ANTNWGVYGPYYGYHWGFMYYSMDTYTTHLGTLGIELIQDKARDLAWRMFVSVKIINTDPDKIWKTADSNIKNAFSRYPPSPKDVEAKKQQWAKEDAAKKSSQPQ*
Ga0137412_100203946	3300015242	Vadose Zone Soil	NPDLVIRYWVNSEKDFNVAANTNWGVYGPYYGYHWGFMYYSMDTYTTHLGTLGIELIQDKARDLAWRMFVSVKIINTDPDKIWKTADSNIKNAFSRYPPSPKDVDAKKQQWAKEDAAKKSSQPQ*
Ga0137412_100672454	3300015242	Vadose Zone Soil	MDTYTTREGTLGIELIAANSRELAWRMFASVKISETHPQKIWKIADGNIKNGSKRFSPSPKDIEANKQQWAKEDAAKKPSQPHH*
Ga0137409_114118902	3300015245	Vadose Zone Soil	MDTYTTHEGTLGIELIAANSRELAWRMFASVKISETDPQKIWKIADGNIKNGSKRISPSPKDIEAKKQQWAKEDATKKPSQPHH*
Ga0137403_101365124	3300015264	Vadose Zone Soil	WGFVYYSMDTYTTHQGTLGIELIQDKARDLAWRMFVSVKITNSNPDKIWKTADSNIKNAFGRYPPSPKDIDAKKQQWAKEDAAKESSQH*
Ga0137403_101884401	3300015264	Vadose Zone Soil	WGFVYYSMDTYTTHQGTLGIELIQDNARDLAWRMFVSVKITDSNPDKIWKTADSNIKSAFSRYPPSPKDIDAKKQQWAKEDAAKKSSQPQ*
Ga0132256_1030253351	3300015372	Arabidopsis Rhizosphere	PDLVVRYIVESQKNVSVASNTNWGSYGPYYGYHWGFIYYTMETATTHMGTLGIELINPHSRSLAWRMFAHVKIIHTEPDKIWKTADSNIKNAFRRYPPSAKEIEEKKKQWAKEDAAKKPSQPQ*
Ga0132255_1045024562	3300015374	Arabidopsis Rhizosphere	SYYGYHWGFIYYSMDTYTNHQGTLGIELIDEKARDLAWRLFAHVRIIQTDPDKIWNTADSNIKNAFKRYPPSPKDIEVKKQQWAKEDASKKSSQPQ*
Ga0182041_103918131	3300016294	Soil	MAASANWGVFGPYFGYHWGSVYYSMETYTNHQGTLGIELIDARARELAWRMFVSVKLIHSDSAKIWKTADSNIKNAFKSYPPSPKAVEAKKQQWAKEDAAKKPS
Ga0182033_102700791	3300016319	Soil	GYHWGYLYDSMEASTTHQGTLSIELIDVKARDLAWRMFASVKIIHTDPDKIWKTADSNIKNAFKGYPPSPKAIETKKKEWAKEDAAKRPAQPQS
Ga0182035_108571832	3300016341	Soil	PDLVVRYWADSQKDVNVAASTNWGVYGPYLGYHWGYLYDSMEASTTHQDTLSIELIDVKARDLAWRMFASVKIIHTDPDKIWKTADSNIKNAFKGYPPSPKAIETKKKQWAKEDAAKKPAQPQS
Ga0182034_109740061	3300016371	Soil	DLVVRYWVNSPKSVDVAGSANWGVYGSYYGYHWGFIYNSMDTYTNHQGTLGIELIDEKARDLAWRLFAHVRIIQTDPDKIWKTADSNIKNAFKRYPPSPKDIEVKKQQWAKEDAAEKSSQHQ
Ga0181505_111384922	3300016750	Peatland	WGVYGPHFGYHWGFVYYSMESYTNHQGMLGIELIDAKTRGLAWRMFASVKLLHSDPDKIWKTAVNNVKDAFKSYPPSPKAVEAKKKQWAKDDSAKNPSQP
Ga0187806_13526541	3300017928	Freshwater Sediment	NADLVVRYWANSQKDVDVASSANWGVYGPYLGYHWGFVYYSMESYTNHQGMLAIELIAAKTRGLAWRMFASVKIIQTDPDKIWKTADGKIKDGFKNYPPSPKAIEAKREQWAKDDSAKNPSQP
Ga0179590_11486512	3300020140	Vadose Zone Soil	GYHWGFVYYSMDTYTTHEGTLGIELIAANSRELAWRMFASVKISETDPQKIWKIADGNIKNGSKRFSPSPKDIEAKKQQWAKEDAAKKPSQPDH
Ga0179590_11511851	3300020140	Vadose Zone Soil	DLVVRYWVNSEKDFNVAANTNWGVYGPYYGYHWGFVYYSMDTYTTHLGTLGIELIQDKARDLAWRMFVSVKITNSNPDKIWKTADSNIKNAFGRYPPSPKDIDAKKQQWAKEDAARKSSQPQ
Ga0179590_12055791	3300020140	Vadose Zone Soil	DSKVAASSNWGVYGPYYGYHWGFVYYSMDTYTTHLGTLGIELIQDKARDLAWRMFVSVKITNSNPDKIWKTADSNIKNAFGRYPPSPKDIDAKKQQWAKEDAAKKSSQPQ
Ga0210403_102053113	3300020580	Soil	LGQQPKNFGVAASTNWGVYGPYYGYHWGFIYYSMDTYTTHEGTLGIELIATNSRDLAWRMFASVKIYETDPQKIWKIADGNIKNGFKRFPPSPKDIEAKEQQWAKEDAAKKPSQP
Ga0210401_115560692	3300020583	Soil	WGVYGPYLGYHWGFVYYSMETYTNHQGMLAIELIGGKNRGLAWRMFASVKLLHTDPDKIWKTADSNIKDAFKNYPPSPKAIEEKKEQWAKEDSAKNSPQP
Ga0210408_114455472	3300021178	Soil	YSMDASKTHLGTLGIDLIDPHSRDLAWRMLANVKIFDTDPDKIWKTADSNIKNAFKRYPPSPKEIEEKKQQWAREDAAKKPSQPHSGQEMMFRQ
Ga0210396_101402373	3300021180	Soil	VYYSMETYTNHQGMLAIELIGGKNRGLAWRMFASVKLLHTDPDKIWKTADSNIKDAFKNYPPSPKAIEEKKEQWAKEDSAKNSPQP
Ga0210396_101912843	3300021180	Soil	NSQKNFDVAASTNWGVYGPYYGYHWGFVYYSMDTYTTHEGTLGIEFIAANSRDLAWRMFASVKITETDPQKIWKIADSNIKNSFKRFSPSPKDIKAKKQQWAKEDATKKSSRP
Ga0210387_118876241	3300021405	Soil	RYWANSQKDVDVASSANWGVYGPYLGYHWGFVYYSMETYTNHQGMLAIELIGGKNRGLAWRMFASVKLLQTDPDKIWKTADSNIKDAFKNYPPSPKAIEEKKQQWAKEDSAKNSSQP
Ga0210394_112360112	3300021420	Soil	YGPYYGYHWGFVYYSMDTYTTHEGTLGIELIAANSRDLAWRMFASVKITETDPQKIWKIADGNIKNGFKRFPPSPKDIQAKKQQWAKEDAAKKSPQP
Ga0210390_108095971	3300021474	Soil	VESQKSFDVATNTNWGVYGPYYGYNWGFIYYSMETATTHMGTLGIDLIDPHSRDLAWRMLANVWIIHTEPDKIWKTADSNIKNAFKRYLPSPKEIEEKKQQWAKDDAAKKPSQPQ
Ga0126371_126723431	3300021560	Tropical Forest Soil	WGFIYYSMDYSTTHHGTLGIELINEKARDLAWRMFASVKIIHTDPDKIWKTADSNIRSAFKRYPPSSKDIEAKKQQWSKEDADQKSLSAPR
Ga0242655_101541432	3300022532	Soil	FVYNSMDASVTHQGTLSIELIDPRSHDLAWRMLASVKILHTDPDKIWKTADSNIKSAFKRYPPSPKDIEAKKKQWAKEDTLKTQSQP
Ga0242654_103770391	3300022726	Soil	FHEVTPEQDPDLVVRYFVESQMGVDLATSTNWGVYGPYYGYHWGFVYYSMDASKTHLGTLGIDLIDPHSRDLAWRMLANVKIFDTDPDKIWKTADSNIKNAFKRYPPSPKEIEEKKQQWAREDAAKKPSQPHSGQEMMFRQ
Ga0247692_10532511	3300024279	Soil	YHWGFMYYSMDTYTTHKGTLGIELIQDKERDLAWRMFVSVKIINTDPDKIWKTADSNIKNAFSRYPPSPKDIDAKKQQWAKEDAAKKSSQP
Ga0179589_100542912	3300024288	Vadose Zone Soil	TYTTHLGTLGIELIQDKARDLAWRMFVSVKIINTDPDKIWKTADSNIKNAFSRYPPSPKDVDAKKQQWAKEDAAKKSSQPQ
Ga0179591_11709074	3300024347	Vadose Zone Soil	MDTYTTHLGTLGIELIQDKARDLAWRMFVSVKITNSNPDKIWKTADSNIKNAFGRYPPSPKDIDAKKQQWAKEDTAKKSSEPQ
Ga0207692_104223912	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MDVNVGANTNWGAYGPYVGYHWGPIYNSMDASVTHQGTLSIEFIDPRSHDLAWRMLASVKILHTDPDKIWKTADNNIKDAFKRYPPSPKDIEAKKKQWAKEDTLKTPSQP
Ga0207699_102291321	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	GFVYYSMETYTNHQGTLGIELIDARARELAWRMFVSVKLIHSDSAKIWKTADSNIKNAFKSYPPSPKAVEAKKQQWAKEDAAKKSSQP
Ga0207693_104331912	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VTVDRRRTPRYPFVAVAELIDEKARDLAWRLFARVRIIQTDPDKIWKTADSNIKNAFKRYPPSSKDIEAKKQQWAKEDASKKSSQP
Ga0207693_108626731	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VRYWVNSQKDVDMAASANWGVFGPYFGYHWGFAYYSMETYTNHQGTLGIELIDARARELAWRMFVSVKLIHSDSAKIWKTADSNIKNAFKSYPPSPKAVEAKKQQWAKEDAAKKPS
Ga0207693_114072651	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VRYFVESQKSVNVGTNSNWGVYGPYYGYHWGFIYDSMETSTTHMGTLGIDLIDPHSRDLAWRMLANVKIYHTDPDRIWKTADSNIKNAFKRFPPSPKDIEEKKQQWAKEDAAKKPSQPQ
Ga0207662_111963901	3300025918	Switchgrass Rhizosphere	FVYYSMDASKTHLGTLGIDLIDPHSRDLAWRMLANVKIFDTDPDKIWKTADSNIKNAFKRYPPSPKEIEEKKQQWAKEDAAKKPCQPQQ
Ga0207690_115004842	3300025932	Corn Rhizosphere	LATNANWGAYGPYYGYHWGFVYYSMDASKTHLGTLGIDLIDPHSRDLAWRMLANVKIFDTDPDKIWKTADSNIKNAFKRYPPSPKEIEEKKQQWAKEDAAKKPCQPQQ
Ga0207689_104181172	3300025942	Miscanthus Rhizosphere	ATNANWGAYGPYYGYHWGFVYYSMDASKTHLGTLGIDLIDPHSRDLAWRMLANVKIFDTDPDKIWKTADSNIKNAFKRYPPSPKEIEEKKQQWAKEDAAKKPCQPQQ
Ga0207658_120379931	3300025986	Switchgrass Rhizosphere	DLVVRYWVNSQKSVDVAGSANWGVYGSYYGYHWGFIYYSMDTYTNHQGTLGIELIDEKARDLAWRLFARVRIIQTDPDKIWKTADSNIKNAFKRYPPSSKDIEAKKQQWAKEDASKKSSQ
Ga0207641_123492651	3300026088	Switchgrass Rhizosphere	HEVTPEHDPDLVVRYFVASQMGVDLATNANWGAYGPYYGYHWGFVYYSMDASKTHLGTLGIDLIDPHSRDLAWRMLANVKIFDTDPDKIWKTADSNIKNAFKRYPPSPKEIEEKKQQWAKEDAAKKPCQPQQ
Ga0209438_10173561	3300026285	Grasslands Soil	YSMDTYTTHLGTLGIELIQDKARDLAWRMFVSVKITNSNPDKIWKTADSNIKNAFGRYPPSPKDIDAKKQQWAKEDAAKKSSQPQ
Ga0209240_11807771	3300026304	Grasslands Soil	HWGFVYYSMDTYTTHLGTLGIELIQDKARDLAWRMFVSVKITNSNPDKIWKTADSNIKNAFGRYPPSPKDIDAKKQQWAKEDTAKKSSEPQ
Ga0257153_11127122	3300026490	Soil	MDTFTNHQGTLGIELIDGKASDLAWRMFASVRIISNDPDKIWKTADGNIENAFKSYPPSAKDKEAKKQQWAKEDAAKKSSQP
Ga0179593_12164543	3300026555	Vadose Zone Soil	WGVYGPYYGYHWGFVYYSMDTYTTHLGTLGIELIQDKARDLAWRMFVSVKITNGNPDKIWKTADSNIKNAFGRYPPSPKDIDARKTTMGQRRRREEVFPTPIMEN
Ga0208983_10676121	3300027381	Forest Soil	ASTNWGAYGPYMGYHWGFVHNSMDASVTHQGTLSIELIDPRSHDLAWRMFASVKILHTDPDKIWKTADRNIKSAFKRYPPSPKDIEAKKKQ
Ga0209523_11315631	3300027548	Forest Soil	MRNVASHTHQGTFSIELIDASSHDLAWRMFASVKILHTDPDKIWKTADQNIKNAFKRYPPSPKDIEAKKKQWAKEDTLKTQSQH
Ga0209076_11649251	3300027643	Vadose Zone Soil	TNWGAYGPYMGYHWGFVHNSMDASVTHQGTLSIELIDPRSHDLAWRMFASVKILHTDPDKIWKTADRNIKSAFKRYPPSPKDIEAKKKQ
Ga0209380_106714721	3300027889	Soil	DESPDLVVRYWANSQKDVDVASSANWGVYGPYLGYHWGFVYYSMETYTNHQGMLAIELIGGKNRGLAWRMFASVKLLHTDPDKIWKTADSNIKDAFKNYPPSPKAIEEKKEQWAKEDSAKNSPQP
Ga0308309_110871921	3300028906	Soil	DVAASTNWGAYGPYYGYHWGFIYYSMDTYTTHEGTLGIELIAANSRDLAWRMFASVKITETDPQKIWKIADGNIKNGFKRFPPSPRDIQAKKQQWAKEDAAKKSSQP
Ga0075386_115315521	3300030916	Soil	RYWVNSQKDVDMAASANWGVFGPYFGYHWGFVYYNMETYTNHQGTLGIELIDAKARELAWRMFVSVKLIHSDSAKIWKTADSNIKNAFKSYPPSPKAVEAKKQQWAKEDAAKKPS
Ga0170824_1133312662	3300031231	Forest Soil	GYHWGFAYYSMETYTNHQGTLGIELIDARARELAWRMFVSVKLIHSDSAKIWKTADSNIKNAFKSYPPSPKAVEAKKQQWAKEDAAKKPS
Ga0170824_1287196731	3300031231	Forest Soil	YYSMETSTTHVGTLGIDLIDPHSRDLAWRMLVNVKILHTDPEKIWKTADSNIKNAFKRYPPSPKEIEEKKQQWAKEDAAKKPSQPQ
Ga0170819_159795821	3300031469	Forest Soil	PYFGYHWGFAYYSMETYTNHQGTLGIELIDARARELAWRMFVSVKLIHSDSAKIWKTADSNIKNAFKSYPPSPKAVEAKKQQWAKEDAAKKPS
Ga0170818_1121626131	3300031474	Forest Soil	IYYSMETSATHVSTLGIDLIDPHSRDLAWRMLANVKLIHTDPEKIWKTADNNIKNAFKRYPPSPKDIEEKKQQWAKEDAAKKPSQPQ
Ga0318528_108132631	3300031561	Soil	VRYWADSQKDVNVAASTNWGVYGPYLGYHWGYLYDSMEASTTHQGTLSIELIDVKARDLAWRMFASVKIIHTDPDKIWKTADSNIKNAFKGYPPSPKAIETKKKQWAKEDAAKKPAQPQS
Ga0306917_107462171	3300031719	Soil	LYDSMEASTTHQGTLSIELIDVKARDLAWRMFASVKIIHTDPDKIWKTADSNIKNAFKGYPPSPKAIETKKKQWAKEDAAKKPAQPQS
Ga0306917_112593391	3300031719	Soil	RYWANSQKDVDMAASANWGVFGPYFGYHWGSVYYSMETYTNHQGTLGIELIDARARELAWRMFVSVKLIHSDSAKIWKTADSNIKNAFKSYPPSPKAVEAKKQQWAKEDAAKKPS
Ga0307469_101208701	3300031720	Hardwood Forest Soil	SQKSVDVAGSANWGVYGSYYGYHWGFIYYSMDTYTNHQGTLGIELIDEKARDLAWRLFARVRIIQTDPDKIWKTADSNIKNAFKRYPPSSKDIEAKKQQWAKEDASKKPSQP
Ga0307469_106823502	3300031720	Hardwood Forest Soil	GYHWGFVYYSMETYTSHQGTLSIELIDTKSRELAWRMFVSVKLIHSDPDKIWKTADSNIKNAFKSYPPSPKDIEAKKQQWAKEDAAKKPSQP
Ga0307469_111964671	3300031720	Hardwood Forest Soil	WGVYGPYYGYHWGFIYYSMETSTTHMGTLGIDLIDPHSRDLAWRMLANVKIYHTDPDKIWKTADSNIKNAFKRFPPSPKDIEEKKQQWAKEDAAKKPSQP
Ga0307469_118805431	3300031720	Hardwood Forest Soil	DSMTAYSTRQGTLGIELISAKTKDLAWRMFASAKLYHTDPDKIWKTADDNIKNAFNGYPPSPKAIEAKKKAWAKEDDAKKLSQP
Ga0306918_110742142	3300031744	Soil	GPYLGYHWGYLYDSMEASTTHQGTLSIELIDVKARDLAWRMFASVKIIHTDPDKIWKTADSNIKNAFKGYPPSPKAIETKKKQWAKEDAAKKPAQPQS
Ga0307475_100053383	3300031754	Hardwood Forest Soil	METATTHRGTLGIDIINPDSCDLAWRMLANVKLIHTDPEKIWKTADNNIKNALKRYPPSPKEIKEKKQQWAKEDAAKKPSQPQ
Ga0318544_102221431	3300031880	Soil	VRYWADSQKDVNVAASTNWGVYGPYLGYHWGYLYDSMEASTTHQGTLSIELIDVKARDLAWRMFASVKIIHTDPDKIWKTADSNIKNAFKGYPPSPKAIETKKKQWAKEDAAKKPAQP
Ga0310913_105152932	3300031945	Soil	THQGTLSIELIDVKARDLAWRMFASVKIIHTDPDKIWKTADSNIKNAFKGYPPSPKAIETKKKQWAKEDAAKKPAQPQS
Ga0310910_100071735	3300031946	Soil	ADSQKDVNVAASTNWGVYGPYLGYHWGYLYDSMEASTTHQGTLSIELIDVKARDLAWRMFASVKIIHTDPDKIWKTADSNIKNAFKGYPPSPKAIETKKKQWAKEDAAKKPAQPQS
Ga0310909_103504392	3300031947	Soil	KDVNVAASTNWGVYGPYLGYHWGYLYDSMEASTTHQGTLSIELIDVKARDLAWRMFASVKIIHTDPDKIWKTADSNIKNAFKGYPPSPKAIETKKKQWAKEDAAKKPAQPQS
Ga0318530_100991041	3300031959	Soil	VVRYWVNSQKDVNVAGSSNWGVYGPYYGYHWGFVYYSMDYSTTHQGTLGIELIDEKARDLAWRMFASVKIIHTDPDKIWKTADGNIRNAFKSYPPSPKDIEAKKQQWSKEDADKKSSSAP
Ga0307479_115865101	3300031962	Hardwood Forest Soil	TNWGVYGPYYGYHWGFAYNSMDTYTTHEGTLGIELIAANSRDLAWRMFASVKITETDPQKIWKIADSNIKNGFKRFPPSPKDIKAKKQQWAKEDAAKKSSQP
Ga0306922_123631131	3300032001	Soil	SYYGYHWGFIYNSMDTYTNHQGTLGIELIDEKARDLAWRLFAHVRIIQTDPDKIWKTADSNIKNAFKRYPPSPKDIEVKKQQWAKEDAAEKSSQHQ
Ga0318562_100809441	3300032008	Soil	GSSNWGVYGPYYGYHWGFVYYSMDYSTTHQGTLGIELIDEKARDLAWRMFASVKIIHTDPDKIWKTADGNIRNAFKSYPPSPKDIEAKKQQWSKEDADKKSSSAPR
Ga0318507_103108922	3300032025	Soil	HWGYLYDSMEASTTHQGTLSIELIDVKARDLAWRMFASVKIIHTDPDKIWKTADSNIKNAFKGYPPSPKAIETKKKQWAKEDAAKKPAQP
Ga0307470_110989391	3300032174	Hardwood Forest Soil	GVYGPYYGYHWGFIYDSMETSTTHTGTLGIDLIDPHSRDLAWRMLANVKIYHTDPDKIWKTADSNIKNAFKRFPPSPKDIEEKKQQWAKEDAAKKPSQP
Ga0307471_1000146347	3300032180	Hardwood Forest Soil	METHTTHQGTLGIEIIEANTRGLAWRMFSSVKLIHTDPDKIWNTADSNIKKAFKSYPPSPKAVQAKKQQWAKEDAAKNSSQP
Ga0307471_1019209481	3300032180	Hardwood Forest Soil	THQGTLSIELIDPRSHDLAWRMLASVKILHTDPDKIWKTADSNIKSAFKRYPPSPKDIEAKKKQWAKEDTLKTQSQP
Ga0307472_1020670471	3300032205	Hardwood Forest Soil	WVNSQKSIDVAGSANWGVYGSYYGYHWGFIYYSMDTYTNHQGTLGIELIDEKARDLAWRLFARVRIIQTDPDKIWKTADSNIKNAFKRYPPSTKDIEAKKQQWAKEDASKKSSQP
Ga0306920_1007922191	3300032261	Soil	HWGSVYYSMETYTNHQGTLGIELIDARARELAWRMFVSVKLIHSDSAKIWKTADSNIKNAFKSYPPSPKAVEAKKQQWAKEDAAKKPS
Ga0318519_109651361	3300033290	Soil	GVYGPYYGYHWGFVYYSMDYSTTHQGTLGIELIDEKARDLAWRMFASVKIIHTDPDKIWKTADGNIRNAFKSYPPSPKDIEAKKQQWSKEDADKKSSSAPR
Ga0326727_100939521	3300033405	Peat Soil	WGFVYYSIESSTTHEGTLGIELIGGKSRELAWRMFASVKIIQTDPDKIWKAADNNIKDAFKRFPPSAKDIAAKKQQWAKEDATKKSGKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062064

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences