Metagenome / Metatranscriptome Family F062090

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062090
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	94 residues
Representative Sequence	MKDALYVLGGLAVVAFFIVRQRRSDRFRERSLLFPLALGVYGIVLLTDTTEHHTLSIASAVLLLLSGVASIGFGVVRGRTIELFERGGELWE
Number of Associated Samples	112
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.27 %
% of genes near scaffold ends (potentially truncated)	97.71 %
% of genes from short scaffolds (< 2000 bps)	93.89 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.229 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.030 % of family members)
Environment Ontology (ENVO)	Unclassified (36.641 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.489 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.00% β-sheet: 3.33% Coil/Unstructured: 31.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF02580	Tyr_Deacylase	10.69
PF13476	AAA_23	3.05
PF01425	Amidase	3.05
PF00578	AhpC-TSA	2.29
PF12710	HAD	2.29
PF00278	Orn_DAP_Arg_deC	2.29
PF00293	NUDIX	1.53
PF12680	SnoaL_2	1.53
PF00005	ABC_tran	1.53
PF08534	Redoxin	1.53
PF01872	RibD_C	1.53
PF12697	Abhydrolase_6	1.53
PF03006	HlyIII	1.53
PF07366	SnoaL	1.53
PF01564	Spermine_synth	0.76
PF00903	Glyoxalase	0.76
PF13602	ADH_zinc_N_2	0.76
PF01636	APH	0.76
PF01738	DLH	0.76
PF00392	GntR	0.76
PF13414	TPR_11	0.76
PF00742	Homoserine_dh	0.76
PF04828	GFA	0.76
PF00753	Lactamase_B	0.76
PF07301	DUF1453	0.76
PF14378	PAP2_3	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG1490	D-aminoacyl-tRNA deacylase	Translation, ribosomal structure and biogenesis [J]	10.69
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	3.05
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	2.29
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	2.29
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.53
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	1.53
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.53
COG0460	Homoserine dehydrogenase	Amino acid transport and metabolism [E]	0.76
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.76
COG4846	Cytochrome c biogenesis protein CcdC	Posttranslational modification, protein turnover, chaperones [O]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.23 %
Unclassified	root	N/A	29.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.23 %
Unclassified	root	N/A	29.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.23 %
Unclassified	root	N/A	29.77 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.64 %
Unclassified	root	N/A	29.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.08 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.29 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.53 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.53 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.53 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %
Jiangellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales	0.76 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.29 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	1.53 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.53 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.53 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	0.76 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.29 %
Allosalinactinospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Allosalinactinospora	1.53 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1.53 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1.53 %
Jiangella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella	0.76 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.29 %
Allosalinactinospora lopnorensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Allosalinactinospora → Allosalinactinospora lopnorensis	1.53 %
unclassified Actinoplanes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes	1.53 %
Jiangella rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella rhizosphaerae	0.76 %
Pseudonocardia oroxyli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia oroxyli	0.76 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.29 %
Actinoplanes sp. SE50/110	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes → Actinoplanes sp. SE50/110	1.53 %
Allosalinactinospora lopnorensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Allosalinactinospora → Allosalinactinospora lopnorensis	1.53 %
Jiangella rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella rhizosphaerae	0.76 %
Pseudonocardia oroxyli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia oroxyli	0.76 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.76 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105247303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300000956\|JGI10216J12902_112095954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300000956\|JGI10216J12902_122613040	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300002459\|JGI24751J29686_10102448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300004479\|Ga0062595_100604255	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300004479\|Ga0062595_102367251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	525	Open in IMG/M
3300004480\|Ga0062592_101694450	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300005093\|Ga0062594_101574478	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300005093\|Ga0062594_102940693	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005331\|Ga0070670_102224749	Not Available	505	Open in IMG/M
3300005336\|Ga0070680_100308369	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300005339\|Ga0070660_101468808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300005344\|Ga0070661_101427017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	583	Open in IMG/M
3300005345\|Ga0070692_10031296	All Organisms → cellular organisms → Bacteria	2667	Open in IMG/M
3300005366\|Ga0070659_100032112	All Organisms → cellular organisms → Bacteria	4070	Open in IMG/M
3300005367\|Ga0070667_100555767	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300005434\|Ga0070709_11568413	Not Available	536	Open in IMG/M
3300005439\|Ga0070711_100035889	All Organisms → cellular organisms → Bacteria	3319	Open in IMG/M
3300005444\|Ga0070694_100901679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	730	Open in IMG/M
3300005456\|Ga0070678_100021720	All Organisms → cellular organisms → Bacteria	4238	Open in IMG/M
3300005459\|Ga0068867_100621163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	945	Open in IMG/M
3300005459\|Ga0068867_101567369	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005459\|Ga0068867_102018685	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005466\|Ga0070685_10752865	Not Available	714	Open in IMG/M
3300005467\|Ga0070706_101653289	Not Available	584	Open in IMG/M
3300005471\|Ga0070698_101647304	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300005526\|Ga0073909_10383925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300005526\|Ga0073909_10617583	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005530\|Ga0070679_100550576	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300005545\|Ga0070695_101416616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes → Actinoplanes sp. SE50/110	577	Open in IMG/M
3300005546\|Ga0070696_100677361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	839	Open in IMG/M
3300005577\|Ga0068857_102225770	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005578\|Ga0068854_100930370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766	Open in IMG/M
3300005614\|Ga0068856_101484508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300005615\|Ga0070702_101388545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes → Actinoplanes sp. SE50/110	574	Open in IMG/M
3300005842\|Ga0068858_101097171	Not Available	781	Open in IMG/M
3300006173\|Ga0070716_101057324	Not Available	645	Open in IMG/M
3300006574\|Ga0074056_11671383	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300006852\|Ga0075433_10191934	All Organisms → cellular organisms → Bacteria	1817	Open in IMG/M
3300006871\|Ga0075434_102404733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300009098\|Ga0105245_12567949	Not Available	563	Open in IMG/M
3300009148\|Ga0105243_10186139	Not Available	1810	Open in IMG/M
3300009176\|Ga0105242_11429334	Not Available	720	Open in IMG/M
3300009551\|Ga0105238_10892066	Not Available	907	Open in IMG/M
3300010375\|Ga0105239_11017532	Not Available	953	Open in IMG/M
3300010396\|Ga0134126_10952960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	963	Open in IMG/M
3300010396\|Ga0134126_11407136	Not Available	770	Open in IMG/M
3300010399\|Ga0134127_12410320	Not Available	606	Open in IMG/M
3300011107\|Ga0151490_1769185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	706	Open in IMG/M
3300011998\|Ga0120114_1048999	Not Available	830	Open in IMG/M
3300012532\|Ga0137373_11121496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300012951\|Ga0164300_10099033	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300012957\|Ga0164303_10063771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1690	Open in IMG/M
3300012984\|Ga0164309_11279641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300012985\|Ga0164308_10028132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3392	Open in IMG/M
3300012985\|Ga0164308_10274806	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300012985\|Ga0164308_11623046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	598	Open in IMG/M
3300012987\|Ga0164307_10850907	Not Available	729	Open in IMG/M
3300012987\|Ga0164307_11218093	Not Available	625	Open in IMG/M
3300012989\|Ga0164305_10279767	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300013102\|Ga0157371_10256589	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300013104\|Ga0157370_11913052	Not Available	532	Open in IMG/M
3300013297\|Ga0157378_12591730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Allosalinactinospora → Allosalinactinospora lopnorensis	559	Open in IMG/M
3300013306\|Ga0163162_13004542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300014326\|Ga0157380_12345733	Not Available	598	Open in IMG/M
3300014745\|Ga0157377_10569427	All Organisms → cellular organisms → Bacteria → Terrabacteria group	803	Open in IMG/M
3300015371\|Ga0132258_11940192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1482	Open in IMG/M
3300015372\|Ga0132256_102018106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	683	Open in IMG/M
3300015373\|Ga0132257_102148822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300015374\|Ga0132255_100991260	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300015374\|Ga0132255_102839845	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300016387\|Ga0182040_11388356	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300018089\|Ga0187774_11094487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella rhizosphaerae	563	Open in IMG/M
3300019869\|Ga0193705_1033210	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300019875\|Ga0193701_1031641	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1085	Open in IMG/M
3300022756\|Ga0222622_10701681	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300025898\|Ga0207692_10406293	Not Available	850	Open in IMG/M
3300025901\|Ga0207688_10697083	All Organisms → cellular organisms → Bacteria → Terrabacteria group	642	Open in IMG/M
3300025905\|Ga0207685_10122770	Not Available	1142	Open in IMG/M
3300025906\|Ga0207699_10603879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	799	Open in IMG/M
3300025914\|Ga0207671_10752791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Allosalinactinospora → Allosalinactinospora lopnorensis	774	Open in IMG/M
3300025916\|Ga0207663_10573602	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300025918\|Ga0207662_11300673	Not Available	517	Open in IMG/M
3300025921\|Ga0207652_10818145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	826	Open in IMG/M
3300025921\|Ga0207652_10823896	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300025921\|Ga0207652_11639002	All Organisms → cellular organisms → Bacteria → Terrabacteria group	548	Open in IMG/M
3300025923\|Ga0207681_11464516	Not Available	573	Open in IMG/M
3300025924\|Ga0207694_11843893	All Organisms → cellular organisms → Bacteria → Terrabacteria group	508	Open in IMG/M
3300025929\|Ga0207664_11873613	Not Available	522	Open in IMG/M
3300025934\|Ga0207686_11050778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia oroxyli	662	Open in IMG/M
3300025935\|Ga0207709_10667924	Not Available	829	Open in IMG/M
3300025936\|Ga0207670_10573318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	924	Open in IMG/M
3300025936\|Ga0207670_10738961	Not Available	817	Open in IMG/M
3300025937\|Ga0207669_10014933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3905	Open in IMG/M
3300025942\|Ga0207689_11371032	All Organisms → cellular organisms → Bacteria → Terrabacteria group	593	Open in IMG/M
3300025949\|Ga0207667_11444685	Not Available	660	Open in IMG/M
3300025981\|Ga0207640_11509267	Not Available	604	Open in IMG/M
3300025986\|Ga0207658_10513100	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300026078\|Ga0207702_12336871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300026089\|Ga0207648_11234647	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300026095\|Ga0207676_11688484	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300026121\|Ga0207683_10544042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1073	Open in IMG/M
3300026121\|Ga0207683_10743474	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300027821\|Ga0209811_10090676	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300028381\|Ga0268264_10089245	All Organisms → cellular organisms → Bacteria	2654	Open in IMG/M
3300028755\|Ga0307316_10250176	All Organisms → cellular organisms → Bacteria → Terrabacteria group	644	Open in IMG/M
3300028782\|Ga0307306_10084432	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300028807\|Ga0307305_10161428	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1034	Open in IMG/M
3300028807\|Ga0307305_10502737	Not Available	543	Open in IMG/M
3300028810\|Ga0307294_10112603	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300028811\|Ga0307292_10067454	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1364	Open in IMG/M
3300028872\|Ga0307314_10090011	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300028881\|Ga0307277_10084295	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300028884\|Ga0307308_10255734	All Organisms → cellular organisms → Bacteria → Terrabacteria group	839	Open in IMG/M
3300028885\|Ga0307304_10007801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3306	Open in IMG/M
3300031543\|Ga0318516_10123277	Not Available	1479	Open in IMG/M
3300031544\|Ga0318534_10508603	Not Available	688	Open in IMG/M
3300031544\|Ga0318534_10699508	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031668\|Ga0318542_10321445	All Organisms → cellular organisms → Bacteria → Terrabacteria group	794	Open in IMG/M
3300031744\|Ga0306918_10437505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1021	Open in IMG/M
3300031744\|Ga0306918_11443611	Not Available	527	Open in IMG/M
3300031765\|Ga0318554_10265344	Not Available	978	Open in IMG/M
3300031781\|Ga0318547_10730145	Not Available	616	Open in IMG/M
3300031795\|Ga0318557_10574859	Not Available	517	Open in IMG/M
3300031819\|Ga0318568_10376451	Not Available	884	Open in IMG/M
3300031833\|Ga0310917_10973763	Not Available	569	Open in IMG/M
3300032009\|Ga0318563_10295314	Not Available	876	Open in IMG/M
3300032009\|Ga0318563_10684331	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300032067\|Ga0318524_10052526	Not Available	1944	Open in IMG/M
3300032205\|Ga0307472_100990014	All Organisms → cellular organisms → Bacteria → Terrabacteria group	787	Open in IMG/M
3300032261\|Ga0306920_103999931	Not Available	535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.60%
Host-Associated	Host-Associated	37.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.83%
Plants	Host-Associated → Plants	37.40%
Aquatic	Environmental → Aquatic	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.32%
Sediment	Environmental → Aquatic → Sediment	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.75%
Loam	Environmental → Terrestrial → Soil → Loam	18.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.05%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.05%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.05%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.05%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.29%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002459	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1052473031	3300000364	Soil	VHAKDAIYVLGGLLVVAFFIVRQRRSDRFRERSLLFPIVLGIYGIILLRDTTEHQALTAASAVLLIVSAAASTGFGVLRGRTIELFTRGGELWE
JGI10216J12902_1120959543	3300000956	Soil	VKPALYVFGGLAVVVFFIVRQRRSDRFRERSLIFPLALGAYGVVVLTDTTKHHALTAASGVLLVLSAIASIGFGVVRGRTIELF
JGI10216J12902_1226130402	3300000956	Soil	MKDALYVLGGLAVVAFFIVRQRRSDRFRERSLLFPLALGVYGIVLLTDTTEHHTLSIASAVLLLLSGVASIGFGVVRGRTIELFERGGELWE
JGI24751J29686_101024481	3300002459	Corn, Switchgrass And Miscanthus Rhizosphere	MRAALYALGGLAVVTVFVIRQRRSDRYRERSLILPLALGLYGLALLRGTWRQDSLTLASATLLLLSALASVGFGVFRGRTMNLFVRDGQLWEQASWRTIGVGWGGLLVTRIALIG
Ga0062595_1006042551	3300004479	Soil	VRQVDLGSAPVKDALYVLGGLAIVVFFIVRQRRSERFRERSILLPLALGIYGVVVLDDTTRHHTLTALSLALLTLSAAASVGFGVIRGQTIEL
Ga0062595_1023672511	3300004479	Soil	MKDALYVVIALGVVAFFIVRQRRSDRFRERSLLFPLALGAYGAVLLTQTSEHNSVTTASAVLLLSSAVASIAFGVIRGLTIELFMRGEELWERASWITIG
Ga0062592_1016944502	3300004480	Soil	VRDALYVVGGLAIVVFFIVRQLRSDRFEQRSLIFPIGLGIYGAVILNGTSKHHPVTAASAALLCLGAAASVGFGVIRGRTIEL
Ga0062594_1015744782	3300005093	Soil	MKDALYVVIALGVVAFFIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHNSVTTASAVLLLSSAVASIAFGVIRGLTIELFMRGEELWERASWTTIGVAGEGSW*
Ga0062594_1029406931	3300005093	Soil	MNLQFPPCRRSLGSPQKAHESCNVKDAIYVLGGIAVVVFFIVRQRRSDRFSERSLLFPIGLGIYGVVLLTDTSQHLALSIASAVLLVLSALASIGFGVIRGRTIELFERSGELWERASWTTIGVGWGGL
Ga0070670_1022247491	3300005331	Switchgrass Rhizosphere	MRAALYALGGLAVVTVFVIRQRRSDRYRERSLILPLALGLYGLALLRGTWRQDSLTLASATLLLLSALASVGFGVFRGRTMNLFVRDGQLWEQASWRTIGVGWGGLLVTRIALIGISGLVGAKLAASPTSIPLMI
Ga0070680_1003083694	3300005336	Corn Rhizosphere	VKDAIYVLGGIAVVVFFIVRQRRSDRFSERSLLFPIGLGIYGVVLLTDTSQHHALSIASAVLLVLSALASIG
Ga0070660_1014688081	3300005339	Corn Rhizosphere	VVVFFVVRQRRSDRFTERSLLFPIALGIYGIVLLTDTSEHHAFTVASGVLLVVSAAASIGFGVIRGRTIELFERGGELWERASWTT
Ga0070661_1014270172	3300005344	Corn Rhizosphere	VRDALYVVGGLAIVVFFIVRQLRSDRFEQRSLIFPIGLGIYGAVILNGTSKHHPVTAASAALLCLSAAASVGFGVIRGRTIELFERD
Ga0070692_100312964	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKDALYVVIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASV
Ga0070659_1000321121	3300005366	Corn Rhizosphere	MKDALYVVIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASVSFGVIRGLTIELFMRGEEL
Ga0070667_1005557671	3300005367	Switchgrass Rhizosphere	MKDALYVVIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASVSFGVIRGLTIELFMRGEELWERA
Ga0070709_115684132	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VKDAIYVLGGLAVVVFFIVRQRRSDRFTERSLLFPIGLGIYGVVLLTDTSEHHAISIASAVLLVISALASIGFGVI
Ga0070711_1000358894	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VRDALYVVGGLAIVVFFIVRQLRSDRFEQRSLILPIGLGIYGAVILNNTSKQHPVTAASAGLLGLSAAASVGFGVVRG
Ga0070694_1009016791	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VRDALYVVGGLAIVVFFIVRQLRSDRFEQRSLIFPIGLGIYGAVILNGTSKHHPVTAASAALLCLSAAASVGFGIIRGRTIELFERDGELWERATWATIAGWIGLLVTRILIIAAATVAGATLAASP
Ga0070678_1000217201	3300005456	Miscanthus Rhizosphere	MKDALYVVIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASVFFGVIRGLTIELF
Ga0068867_1006211631	3300005459	Miscanthus Rhizosphere	VRDALYVVGGLAIVVFFIVRQLRSDRFEQRSLIFPIGLGIYGAVILNGTSKHHPVTAASAALLCLSAAASVGFGVIRGRTIELF
Ga0068867_1015673692	3300005459	Miscanthus Rhizosphere	MKDALYVVIALGVVAFVIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHNSVTTASAVLLLSSAVASIAFGVIRGLTIELFMRGEE
Ga0068867_1020186852	3300005459	Miscanthus Rhizosphere	VKEALYVVGGLAVVAFFIVRQRRSDRFSERSLLFPIGLGIYGVILLTDTSEHHALSIASALLLVLSALASVGFGVIRGRTIELFERRGELWGRASWTTIGVGWGGLLA
Ga0070685_107528651	3300005466	Switchgrass Rhizosphere	MRAALYALGGLAVVTVFVIRQRRSDRYRERSLILPLALGLYGLALLRGTWRQDSLTLASATLLLLSALASVGFGVFRGRTMNLFVRDGQLWEQASWRTIGVGWGGLLVTRIALIGISGLVGAKLAASPT
Ga0070706_1016532892	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VIDAIYILGGLGVVVFFTVRQRRSDRFRERSLLFPLALGIYGAVLLTDTSEHHALSAASGILLVISAAASIGFGV
Ga0070698_1016473041	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKDALYVVIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASVFFGVIRGLTIELFMRGEELWERASWTTIGVGWGGLVVTR
Ga0073909_103839251	3300005526	Surface Soil	MKDAVYLLGGLAVVVFFIVRQRRSDRFSERSLLFPIGLGIYGVILLTDTSEHHALGIASAVLLGLSALASIGFG
Ga0073909_106175832	3300005526	Surface Soil	MKDALYVVIALGVVAFFIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHNSVTTASAVLLLSSAVASIAFGVIRGLTIELFMRGEELWERASWTTIGVGWGGL
Ga0070679_1005505762	3300005530	Corn Rhizosphere	VLGGLAVAVFFIVRQRRSERFRERSLLFPAALGIYGIVLLTDTTEHHALTLASALLLVLSAAASVGFGMIRGRTIELFVRGGELWERASWLTIGVGWGGLL
Ga0070695_1014166161	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MKDALYVVIALGVVAFFIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHNSVTTASAVLLLSSAVASIAFGVIRGLTIELFMRGEELWERASWTTIGVGWGGLVVTRIALIAVAAAVGAKV
Ga0070696_1006773611	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VRDALYVVGGLAIVVFFIVRQLRSDRFEQRSLIFPIGLGIYGAVILNSTSKHHPVTAASAALLCLSAAASVGFGVIRGRTIELFE
Ga0068857_1022257701	3300005577	Corn Rhizosphere	MKDALYVVIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASVSF
Ga0068854_1009303701	3300005578	Corn Rhizosphere	VRDALYVVGGLAIVVFFIVRQLRSDRFEQRSLIFPIGLGIYGAVILNGTSKHHPLTAASAALLCLSAAASVGFGIIR
Ga0068856_1014845081	3300005614	Corn Rhizosphere	VKDAIYVLGGIAVVVFFIVRQRRSDRFSERSLLFPIGLGIYGVVLLTDTSQHHALSIASAVLLVLGALASIGFGVIRGRTIELFERSG
Ga0070702_1013885451	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MKDALYVVIALGVVAFFIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHNSVTTASAVLLLSSAVASIAFGVIRGLTIELFMRGEELWERASWTTISVGWGGLVVTRIALIAVAAA
Ga0068858_1010971712	3300005842	Switchgrass Rhizosphere	VKEALYVVGGLAVVAFFIVRQRRSDRFSERSLLFPIGLGIYGVILLTDTSEHHALSIASALLLVLSALA
Ga0070716_1010573241	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VKDALYVVGGLAIVVFVIVRQLRSERFEQRSLIFPIGLGIYGAVILNGTSKHHPVTAASAALLGASAAASVGFGVIRGRTIELFERDGELWERATWVTIA
Ga0074056_116713831	3300006574	Soil	MKDALYVVIALGVVAFFIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAIASIGFGVIRGLTIELFMRGEELWE
Ga0075433_101919343	3300006852	Populus Rhizosphere	MRDAIYVLGGLAVVLFFIVRQRRSDRFTERSLLFPIGLGIYGVILLTDTSEHHALSIASAVLLLLSALASIGFGVIRGRTIELFERSGELWERASWTTIGVGWGGLLA
Ga0075434_1024047332	3300006871	Populus Rhizosphere	LPDPCEPSYRLRRRMKDAVYVLGGLVVIVFFIVRQRRSDRFRERSFLFPLALGIYGLVLLTDTSEHHALSIASAVILVLSAAASV
Ga0105245_125679491	3300009098	Miscanthus Rhizosphere	MKGAIYVLGGLAVVVFFIVRQRRSDRFTERSLLIPIGLGIYGVVLLTDTSEHHAFSIASAVLLVLSALASIGFGVIRGRTI
Ga0105243_101861391	3300009148	Miscanthus Rhizosphere	VKEALYVVGGLAVVAFFIVRQRRSDRFSERSLLFPIGLGIYGVILLTDTSEHHALSIASALLLVLSALASVGF
Ga0105242_114293341	3300009176	Miscanthus Rhizosphere	MALYALGGLAIVTIFVVRQRRSDRYRERSLILPLVLGLYGLALLRGTWRHDPLTFVSIVLLALSALASIGFGVFRGRTINLFVRDGELWEQASWRTIGVGWGGLLLARVALIGIAATVTVSGPKRCASTR*
Ga0105238_108920661	3300009551	Corn Rhizosphere	MALYALGGLAIVTIFVVRQRRSDRYRERSLILPLVLGLYGLALLRGTWRHDPLTFVSIVLLALSALASIGFGVFRGRTISLFVRDGELWEQASWRTIGVGWGGLLFARVALIGIAGLVGA
Ga0105239_110175321	3300010375	Corn Rhizosphere	VRDALYVLGGLAVVVFFVVRQRRSDRFTERSLLFPIALGIYGIVLLTDTSEHHAFTVASGVLLVVSAAASIGFGVIRGRTIELFERGGELWERASWTTVGVGW
Ga0134126_109529602	3300010396	Terrestrial Soil	MALYALGGLAIVTIFVVRQRRSDRYRERSLILPLVLGLYGLALLRGTWRHDPITFVSIVLLALSALASIGFGVFRGRTISLFVRDGELWEQASWRTIGVGWGGLLFA
Ga0134126_114071361	3300010396	Terrestrial Soil	VIDAIYILGGLGVVVFFTVRQRRSDRFRERSLLFPLALGIYGAVLLTDTSEHHALSAASGILLVISAAASIGFGVLRGRTIELFVRGGELWERASWTTIGVGWGRPRPDEGRPDRSCRRR
Ga0134127_124103201	3300010399	Terrestrial Soil	VKEALYVVGGLAVVAFFIVRQRRSDRFSERSLLFPIGLGIYGVILLTDTSEHHALSIASALLLVLSALASVGFGVIRGRTIELFERRGELWERASW
Ga0151490_17691851	3300011107	Soil	VRDALYVVGGLAIVVFFIVRQLRSDRFEQRSLVFPIGLGVYGAVILNNTSKQHPVTAASAGLLGLSAAASVGFGVIRGRTIELFER
Ga0120114_10489992	3300011998	Permafrost	VTAIEKDAVYVLGGLAVVSFFIVRQRRSGRFRERSLLFPLALGIYGVVLLTNTSEHVSLTVASAGLLSLSALASIGFGVIRGRTIELFV
Ga0137373_111214962	3300012532	Vadose Zone Soil	VVSGTEKSAIYVLGGLAVVAFFIVRQRRSDRFRERSLLFPMALGIYGVALLTNTSKHRSLNVASAVLLLLSGLASIGFGAIRGL
Ga0164300_100990331	3300012951	Soil	MKDALYVVIALGVVAFFIVRQRRSDRFRERSLLFPLALGVYGVVLLTQTSEHNSITTASAVLLLSSAVASIAFGVVRGLTIELFMRGEELWERASWTTIGVGWGGL
Ga0164303_100637714	3300012957	Soil	VRDALYVVGGLAIVVFFIVRQLRSDRFEQRSLIFPIGLGIYGAVILNGTSKHHPVTAASAALLCLSAAASVGFGVIRGRTIELFERDGELWE
Ga0164309_112796412	3300012984	Soil	MKDAVYLLGGLAVVVFFIVRQRRSDRFSERSLLFPIGLGIYGVILLTDTSEHHALGIASAVLLVLSALASIGFGVIRG
Ga0164308_100281327	3300012985	Soil	VRDALYVAGGLAVVVFFIVRQLRSERFEQRSLIFPVGLGIYGAVILNSTSKQHPVTAASAGLLCLSAAASVGLGVVRGR
Ga0164308_102748062	3300012985	Soil	MKDALYVVIALGVVAFFIVRQRRSDRFRERSLLFPLALGVYGVVLLTQTSEHNAVTTASAVLLLSSAVASIAFGVVRGLTIELFMRG
Ga0164308_116230461	3300012985	Soil	VRDALYVVGGLAIVVFFIVRQLRSDRFEQRSLIFPIGLGIYGAVILNNTSKHHPVTPASAGLLGLSAVASVAFGIVRGRTIELFERDGELWERATWATIAGWIG
Ga0164307_108509072	3300012987	Soil	VKEALYVVGGLAVVAFFIVRQRRSDRFSERSLLFPIGLGIYGVILLTDTSEHHALSIASALLLVLSALASVGFGVIRGRTIELFERRGELW
Ga0164307_112180931	3300012987	Soil	MVKDAIYVLGGLAVVVFFVVRQRRSDRFRERSLLFPIALGIYGVVLLTSTSEHHTLTVASAVLLILSTAASIGFGVIRGRTIELFTRGGELWERASW
Ga0164305_102797671	3300012989	Soil	MKDAVYLLGGLAVVVFFIVRQRRSDRFSERSLLFPIGLGIYGVILLTDTSEHHALGIASAVLLVLSALASIGFG
Ga0157371_102565891	3300013102	Corn Rhizosphere	MKDALYVGIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVAS
Ga0157370_119130521	3300013104	Corn Rhizosphere	MKDALYVVIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASVSFGVIRG
Ga0157378_125917301	3300013297	Miscanthus Rhizosphere	MKDALYVVIALGVVAFFIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHNSVTTASAVLLLSSAVASIAFGVVRGLTIEL
Ga0163162_130045421	3300013306	Switchgrass Rhizosphere	MRSAIYVVGALAVVVFFVVRQRRSDRFRERSLLFPAALGVYGVVALTDTTEHHALTLASAALLLASAAASV
Ga0157380_123457331	3300014326	Switchgrass Rhizosphere	MALYALGGLAIVTIFVVRQRRSDRYRERSLILPLVLGLYGLALLRGTWRHDPLTFVSIVLLALSALASIGFGVFRGRTIDLFVRDGELWEQASWRTIGVGWGGLLLARVALIGIAGLVGA
Ga0157377_105694271	3300014745	Miscanthus Rhizosphere	LNAPDAIYVLGGLAVAVFFIVRQRRSERFRERSLLFPAALGIYGIVLLTDTTEHHALTLASALLLVLSAAASVGFGMIRGRTIELFVRG
Ga0132258_119401921	3300015371	Arabidopsis Rhizosphere	MKDAVYVLGGLVVIVFFIVRQRRSDRFRERSFLFPLALGIYGLVLLTDTSEHHALSIASAVILVLSAA
Ga0132256_1020181061	3300015372	Arabidopsis Rhizosphere	MRSAIYVVGALAVVVFFVVRQRRSDRFRERSLLFPAALGVYGVVALTDTTEHHALTLASAALLLASAAASVGFGVLRGRTIELFVR
Ga0132257_1021488221	3300015373	Arabidopsis Rhizosphere	VKDAIYVLGGLAVVVFFIVRQRKSDRFRERSLLFPIGLGIYGVILLIDTTEHHALTVASAMLLVLSVLASVGFGVIRGRTIELFEHGGELWERATWTTIAAGWGGLLLTRITLIGMATAVGATVAAS
Ga0132255_1009912603	3300015374	Arabidopsis Rhizosphere	VVVFFIVRQRRSDRFSERSLLFPIGLGIYGVILLTDTSERHALGIASAVLVVLSALTSIGSGVIRGRTIELFERSGELWERASWTTIGLGWGGLLATRIVLIAVA
Ga0132255_1028398451	3300015374	Arabidopsis Rhizosphere	MKDAVYVLGGLVVIVFFIVRQRRSDRFRERSFLFPLALGIYGLVLLTDTSEHHALSIASAVILVLSAAASIGFGVVRGQTIELFERGGELWERATWKTIAAGWGGLLLTRVALIGVAAAIGAKV
Ga0182040_113883561	3300016387	Soil	VQYRAGVKAALHVLGGLAVVVFFIVRQRRSDRFRERSLLFPLALGIYGVVVLSDSTKHHALTVASTVLLVLSALASIGFGVVRGRTIELFERAGELWERASWTTIVVGWGGLMLTRVGLIAIAAA
Ga0187774_110944872	3300018089	Tropical Peatland	VSASEKDALYVLGGLAVIAFFVVRQRRSDRFRERSMLFPLALGAYGIVLLTDTSKHVALTAASTALLVLSTAVSAAFAQTPASVGA
Ga0193705_10332101	3300019869	Soil	VSATAKDVIYVLGGLAVVVFFIVRQRRSGRFRERSLLFPIALGIYGVVLLTDTSKHVSINVASVVLLILSGLASVGFGVIRGRTIELFARGGELW
Ga0193701_10316412	3300019875	Soil	VVSATAKDALYVLGGLAVIVFFIVRQRRSGRFRERSILFPIALGSYGVVLLTDTSKHVSLNAASVVLLILSGLASIGFG
Ga0222622_107016811	3300022756	Groundwater Sediment	VSATAKDVIYVLGGLAVVVFFIVRQRRSGRFRERSLLFPIALGIYGVVLLTDTSKHVSINVASVVLLILSGLASVGFGVIRGRTIELFVRGGELWERAS
Ga0207692_104062931	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VRDALYVVGGLAIVVFFIVRQLRSDRFEQRSLIFPIGLGIYGAVILNNTSKQHPVTAASAGLLGLSAVASVGFGVIRGRTIEL
Ga0207688_106970831	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	LNAPDAIYVLGGLAVAVFFIVRQRRSERFRERSLLFPAALGIYGIVLLTDTTEHHALTLASALLLVLSAAASVGFGMIRGRTIELFVRGGELWERASWLTI
Ga0207685_101227702	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VKEALYVVGGLAVVAFFIVRQRRSDRFSERSLLFPIGLGIYGVILLTDTSEHHALSIASALLLVLSALASVGFGVIRGRTIEL
Ga0207699_106038791	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VRDALYVVGGLAIVVFFIVRQLRSDRFEQRSLIFPIGLGIYGAVLLTDTSEHHALSAASGILLVISAAASIGFGVLRGRTIELFVRGGELWER
Ga0207671_107527912	3300025914	Corn Rhizosphere	MKDALYVVIALGVVAFFVVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASVSFGVIRGLTIELFMRGEELWERASWTTIGVGWGGLVVTRIALI
Ga0207663_105736021	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKDALYVVIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASVFFGVIRGLTIE
Ga0207662_113006731	3300025918	Switchgrass Rhizosphere	VRDALYVLGGLAVVVFFVVRQRRSDRFTERSLLFPIALGIYGIVLLTDTSEHHAFTVASGVLLVVSAAASIGFGVIRGRTIE
Ga0207652_108181451	3300025921	Corn Rhizosphere	VRDALYVVGGLAIVVFFIVRQLRSDRFEQRSLIFPIGLGIYGAVILNGTSKHHPVTAASAALLCLSAAASVGFGIIRGRTIELFERDGELWERATWATIAGWIGLLVTRILIIAAATVAGATLAASPSSI
Ga0207652_108238961	3300025921	Corn Rhizosphere	MKDALYVVIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASVSFGVIRGLTIELFMRGEELWERASWTTIGVGWGGLVV
Ga0207652_116390021	3300025921	Corn Rhizosphere	LNAPDAIYVLGGLAVAVFFIVRQRRSERFRERSLLFPAALGIYGIVLLTDTTEHHALTLASALLLVLSAAASVGFGMIRGRTIELFVRGGELWERASWLTIGV
Ga0207681_114645162	3300025923	Switchgrass Rhizosphere	MKDALYVVIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASVFFGVIRGLTIELFIRGEELWERASWTTI
Ga0207694_118438931	3300025924	Corn Rhizosphere	LNAPDAIYVLGGLAVAVFFIVRQRRSERFRERSLLFPAALGIYGIVLLTDTTEHHALTLASALLLVLSAAASVGFGVIR
Ga0207664_118736131	3300025929	Agricultural Soil	MKDALYVVIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASVFFGVIRGLTIELFIR
Ga0207686_110507781	3300025934	Miscanthus Rhizosphere	MALYALGGLAIVTIFVVRQRRSDRYRERSLILPLVLGLYGLALLRGTWRHDPLTFVSIVLLALSALASIGFGVFRGRTINLFVRDGELWEQASWRTIGVGWGGLLLARVALIGIAGLVGAHFAASPTSIPLMIA
Ga0207709_106679241	3300025935	Miscanthus Rhizosphere	VKEALYVVGGLAVVAFFIVRQRRSDRFSERSLLFPIGLGIYGVILLTDTSEHHALSIASALLLVLSALASVGFGVIR
Ga0207670_105733181	3300025936	Switchgrass Rhizosphere	VRDALYVVGGLAIVVFFIVRQLRSDRFEQRSLIFPIGLGIYGAVILNSTSKHHPVTAASAALLCLSAAASVGFGVIRGA
Ga0207670_107389612	3300025936	Switchgrass Rhizosphere	VKEALYVVGGLAVVAFFIVRQRRSDRFSERSLLFPIGLGIYGVILLTDTSEHHALSIASALLLVLSALASVGFGVIRGRTIELFERRGELWERASWTTIG
Ga0207669_100149335	3300025937	Miscanthus Rhizosphere	MKDALYVVIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASVSFGVIRGLTIELFMRGEELWERASWTTIGVGWGGL
Ga0207689_113710322	3300025942	Miscanthus Rhizosphere	LNAPDAIYVLGGLAVAVFFIVRQRRSERFRERSLLFPAALGIYGIVLLTDTTEHHALTLASALLLVLSAAASVGFG
Ga0207667_114446851	3300025949	Corn Rhizosphere	MKDALYVVIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASVSFGVIRGLTIELFMRG
Ga0207640_115092672	3300025981	Corn Rhizosphere	MKDALYVVIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASVFFGVIRGLTIELFIRGEELWERASWTTIGVGWGGLVVTRVALIAVAA
Ga0207658_105131002	3300025986	Switchgrass Rhizosphere	MKDALYVVIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASVSFGVIRGLTIELFMRGEELWERASWTTI
Ga0207702_123368712	3300026078	Corn Rhizosphere	VKDAIYVLGGIAVVVFFIVRQRRSDRFSERSLLFPIGLGIYGVVLLTDTSQHLALSIASAVLLVLSALASIGFGVIRGR
Ga0207648_112346472	3300026089	Miscanthus Rhizosphere	MKDALYVVIALGVVAFVIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHNSVTTASAVLLLSSAVASIAFGVIRGLTIELFMRGEELWERASWTTIGVG
Ga0207676_116884841	3300026095	Switchgrass Rhizosphere	MALYALGGLAIVTIFVVRQRRSDRYRERSLILPLVLGLYGLALLRGTWRHDPLTFVSIVLLALSALASIGFGVFRGRTIDLFVRDGELWEQASWRTIGVGWGGLLLARVAL
Ga0207683_105440423	3300026121	Miscanthus Rhizosphere	MVKDAIYVLGGLAVVVFFVVRERRSDRFRERSLLFPIALGIYGVVLLASTSEHHTLTVASAVLLILSTAASIGFGV
Ga0207683_107434742	3300026121	Miscanthus Rhizosphere	MKDALYVVIALGVVAFFIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHNSVTTASAVLLLSSAVASIAFGVIRGLTIELFMRGEELWERASWTTIGVGWGGLVVTRIAL
Ga0209811_100906762	3300027821	Surface Soil	MKDAVYLLGGLAVVVFFIVRQRRSDRFSERSLLFPIGLGIYGVILLTDTSEHHALGIASAVLLGLSALAFRIDRDYVRRSAG
Ga0268264_100892451	3300028381	Switchgrass Rhizosphere	MKDALYVVIALGVVAFLIVRQRRSDRFRERSLLFPLALGVYGAVLLTQTSEHDSLTTASAVLLLSSAVASVSFGVIR
Ga0307316_102501762	3300028755	Soil	VVSATAKDALYVLGGLAVIVFFIVRQRRSGRFRERSIFFPIALGSYGVVLLTDTSKHVSLNAASVVLLILSGLASIGFGVIRGRTIELFVRG
Ga0307306_100844321	3300028782	Soil	VSATAKDVIYVLGGLAVVVFFIVRQRRSGRFRERSLLFPIALGIYGVVLLTDTSKHVSINVASVVLLILSGLASVGFGVIRGRTIELFARGGELWE
Ga0307305_101614281	3300028807	Soil	VVSATAKDALYVLGGLAVIVFFIVRQRRSGRFRERSILFPIALGSYGVVLLTDTSKHVSLNAASVVLLILSGLASIGFGVTRGRT
Ga0307305_105027372	3300028807	Soil	VSGVRDAIYVIGGLAVVVFFIVRQRRSDRFRERSLLFPIGLGIYGVVLLTGTSEHHALSVASAVLLVLSAVASIGFGVIRGRTI
Ga0307294_101126032	3300028810	Soil	VSATAKDVIYVLGGLAVVVFFIVRQRRSGRFRERSLLFPIALGIYGVVLLTDTSKHVSINVASVVLLILSGLASVGFGVIRGRTIELFARGGELWESASWMTIGAGWGGL
Ga0307292_100674541	3300028811	Soil	VVSATAKDALYVLGCLAVIVFFIVRQRRSGRFRERSILFPIALGSYGVVLLTDTSKHVSLNAASVVLLILSGLASIGFG
Ga0307314_100900112	3300028872	Soil	VSATAKDVIYVLGGLAVVVFFIVRQRRSGRFRERSLLFPIALGIYGVVLLTDTSKHVSINVASVVLLILSGLASVGFGVIRGRTIELFARGGELWECASWMT
Ga0307277_100842952	3300028881	Soil	VSATAKDVIYVLGGLAVVVFFIVRQRRSGRFRERSLLFPIALGIYGVVLLTDTSKHVSINVASVVLLILSGLASVGFGVIRGRTIELFARGGELWESASWMTIGAGWGGLLV
Ga0307308_102557342	3300028884	Soil	VVSATAKDALYVLGGLAVIVFFIVRQRRSGRFRERSILFPIALGSYGVVLLTDTSKHVSLNAASVVLLILSGLASIGFGVIRGRTIELF
Ga0307304_100078011	3300028885	Soil	VSATAKDVIYVLGGLAVVVFFIVRQRRSGRFRERSLLFPIALGIYGVVLLTDTSKHVSINVASVVLLILSGLASVGFGVIRGRTIELFARGGELWECAS
Ga0318516_101232771	3300031543	Soil	VSALDKDALYVLGGLAVVTFFIVRQRRSDRFRERTLLFPLALGVYGIVLLTDTSKHLVLTLASGVLLTLSALASIGFGVVRGRTIELFERGGELWERASWRTIGVGWGGLLTVRLVRTAPDD
Ga0318534_105086031	3300031544	Soil	MSATARDALYVLGGLAVVAFFIVRQRRSDRFRERSLLFPIALGIYGIVLLTDTSKHLAITVASTLILLLSAVASVGFGVIRGRTIE
Ga0318534_106995082	3300031544	Soil	VQYRAGVKAALYVLGGLAVVVFFIVRQRRSDRFRERSLLFPLALGIYGVVVLSDSTKHHALTVASTVLLVLSALASIGFGVVRGRTIELFERAGELWERASWTT
Ga0318542_103214452	3300031668	Soil	VKDALYIVGGAAIVVFFIVRQLRSDRFRERSLIFPLALGIYGALVLRGAARAHPFTAASVALLSLSALASIAFGVFRGHTIE
Ga0306918_104375052	3300031744	Soil	VQYRAGVKAALHVLGGLAVVVFFIVRQRRSDRFRERSLLFPLALGIYGVVVLSDSTKHHALTVASTVLLVLSAL
Ga0306918_114436111	3300031744	Soil	VSALDKDALYVLGGLAVVTFFIVRQRRSDRFRERTLLFPLALGVYGIVLLTDTSKHLVLTLASGVLLTLSALASIGFGVVRGRTIELF
Ga0318554_102653441	3300031765	Soil	VKDAIYVLGGLAVVVFFIVRQRRSDRFSDRSLLFPIGLGIYGVVLLTDTSKHHALSIASAVLLVLSA
Ga0318547_107301452	3300031781	Soil	VKDALYIVGGAAIVVFFIVRQLRSDRFRERSLIFPLALGIYGAFVLRGAARTHPFTAASVALLSLSALASIAFGVFRGHTIELFERGGELWER
Ga0318557_105748592	3300031795	Soil	VSALDKDALYVLGGLAVVTFFIVRQRRSDRFRERTLLFPLALGVYGIVLLTDTSKHLVLTLASGVLLTLSALASIGFGVVRGRTIELFERGGELWERA
Ga0318568_103764512	3300031819	Soil	VKDALYIVGGAAIVVFFIVRQLRSDRFRERSLIFPLALGIYGAFVLRGAARAHPFTAASVALLSLSALASIAFGVFRGHTIELFERGGELWERATWRTVAGWG
Ga0310917_109737631	3300031833	Soil	VSALDKDALYVLGGLAVVTFFIVRQRRSDRFRERTLLFPLALGVYGIVLLTDTSKHLVLTLASGVLLTLSALASIGFGVVRGRTIELFERGGELWERASWRTIGVGWGGLLTVRLVLIGV
Ga0318563_102953141	3300032009	Soil	VKDAIYVLGGLAVVVFFIVRQRRSDRFSDRSLLFPIGLGIYGVVLLTDTSKHHALSIASAVLLVLSAFASIGFGVI
Ga0318563_106843311	3300032009	Soil	VQYRAGVKAALHVLGGLAVVVFFIVRQRRSDRFRERSLLFPLALGIYGVVVLSDSTKHHALTVASTVLLVLSALASIGFGVVRGRTIELFERAGELWERASWTTIVVGWGGLML
Ga0318524_100525261	3300032067	Soil	VSALDKDALYVLGGLAVVTFFIVRQRRSDRFRERTLLFPLALGVYGIVLLTDTSKHLVLTLASGVLLTLSALASIGFGVVRGRTIELFERGGELWERASWRTIGVGWGGLLTVRLVL
Ga0307472_1009900142	3300032205	Hardwood Forest Soil	MKDALYVLGGLVVVVLLIIRQRRSDRFRDRSLLFPLALGVYGIVLLADTSEHHALSVASALILVLSAAASIGFGVVRGQTIELFERGGELWERATWTTIVAGWGGLLVAR
Ga0306920_1039999312	3300032261	Soil	VSALDKDALYVLGGLAVVTFFIVRQRRSDRFRERTLLFPLALGVYGIVLLTDTSKHLVLTLASGVLLTLSALASIGFGVVRGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062090

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences