NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F062097

Metagenome / Metatranscriptome Family F062097

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F062097
Family Type Metagenome / Metatranscriptome
Number of Sequences 131
Average Sequence Length 64 residues
Representative Sequence MKALGAECHVTGDTVRAVLAENQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQHSQTTAGTTA
Number of Associated Samples 118
Number of Associated Scaffolds 131

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.24 %
% of genes from short scaffolds (< 2000 bps) 92.37 %
Associated GOLD sequencing projects 113
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(12.977 % of family members)
Environment Ontology (ENVO) Unclassified
(23.664 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.779 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.63%    β-sheet: 10.53%    Coil/Unstructured: 56.84%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 131 Family Scaffolds
PF12679ABC2_membrane_2 95.42
PF13414TPR_11 1.53
PF08123DOT1 0.76
PF01729QRPTase_C 0.76
PF03548LolA 0.76

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 131 Family Scaffolds
COG0157Nicotinate-nucleotide pyrophosphorylaseCoenzyme transport and metabolism [H] 0.76
COG1488Nicotinic acid phosphoribosyltransferaseCoenzyme transport and metabolism [H] 0.76
COG2834Outer membrane lipoprotein-sorting proteinCell wall/membrane/envelope biogenesis [M] 0.76

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001593|JGI12635J15846_10080031All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2393Open in IMG/M
3300001867|JGI12627J18819_10127911All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1041Open in IMG/M
3300004080|Ga0062385_10965799All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter570Open in IMG/M
3300004152|Ga0062386_100089517All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2357Open in IMG/M
3300005175|Ga0066673_10293667All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter947Open in IMG/M
3300005177|Ga0066690_10248823All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1192Open in IMG/M
3300005332|Ga0066388_107228528All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter558Open in IMG/M
3300005436|Ga0070713_101168311All Organisms → cellular organisms → Bacteria → Acidobacteria745Open in IMG/M
3300005538|Ga0070731_10076452All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2221Open in IMG/M
3300005538|Ga0070731_10421171All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter888Open in IMG/M
3300005541|Ga0070733_10632820All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter718Open in IMG/M
3300005542|Ga0070732_10177905All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1269Open in IMG/M
3300005542|Ga0070732_10949217All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter526Open in IMG/M
3300005591|Ga0070761_10354001All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter890Open in IMG/M
3300005610|Ga0070763_10023620All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2743Open in IMG/M
3300005886|Ga0075286_1010052All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1107Open in IMG/M
3300005995|Ga0066790_10098002All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1260Open in IMG/M
3300006173|Ga0070716_100862725All Organisms → cellular organisms → Bacteria → Acidobacteria706Open in IMG/M
3300006176|Ga0070765_102200120All Organisms → cellular organisms → Bacteria → Acidobacteria514Open in IMG/M
3300006237|Ga0097621_100634592All Organisms → cellular organisms → Bacteria → Acidobacteria979Open in IMG/M
3300006893|Ga0073928_10310874All Organisms → cellular organisms → Bacteria → Acidobacteria1180Open in IMG/M
3300009521|Ga0116222_1093438All Organisms → cellular organisms → Bacteria → Acidobacteria1296Open in IMG/M
3300009623|Ga0116133_1179547All Organisms → cellular organisms → Bacteria → Acidobacteria563Open in IMG/M
3300009637|Ga0116118_1165899All Organisms → cellular organisms → Bacteria → Acidobacteria706Open in IMG/M
3300009646|Ga0116132_1131386All Organisms → cellular organisms → Bacteria → Acidobacteria765Open in IMG/M
3300009665|Ga0116135_1051881All Organisms → cellular organisms → Bacteria → Acidobacteria1427Open in IMG/M
3300010046|Ga0126384_11154723All Organisms → cellular organisms → Bacteria → Acidobacteria712Open in IMG/M
3300010361|Ga0126378_10094980All Organisms → cellular organisms → Bacteria → Acidobacteria2928Open in IMG/M
3300010366|Ga0126379_10383109All Organisms → cellular organisms → Bacteria → Acidobacteria1448Open in IMG/M
3300010376|Ga0126381_101057336All Organisms → cellular organisms → Bacteria → Acidobacteria1172Open in IMG/M
3300010376|Ga0126381_102075040All Organisms → cellular organisms → Bacteria → Acidobacteria819Open in IMG/M
3300010379|Ga0136449_103698935All Organisms → cellular organisms → Bacteria → Acidobacteria578Open in IMG/M
3300011271|Ga0137393_10142315All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1995Open in IMG/M
3300011411|Ga0153933_1053147All Organisms → cellular organisms → Bacteria → Acidobacteria881Open in IMG/M
3300012363|Ga0137390_11782126All Organisms → cellular organisms → Bacteria → Acidobacteria548Open in IMG/M
3300012469|Ga0150984_112598552All Organisms → cellular organisms → Bacteria → Acidobacteria661Open in IMG/M
3300012930|Ga0137407_11119694All Organisms → cellular organisms → Bacteria → Acidobacteria746Open in IMG/M
3300012958|Ga0164299_10919326All Organisms → cellular organisms → Bacteria → Acidobacteria637Open in IMG/M
3300014489|Ga0182018_10409693All Organisms → cellular organisms → Bacteria → Acidobacteria724Open in IMG/M
3300016270|Ga0182036_10463617All Organisms → cellular organisms → Bacteria → Acidobacteria998Open in IMG/M
3300017936|Ga0187821_10430228All Organisms → cellular organisms → Bacteria → Acidobacteria544Open in IMG/M
3300017938|Ga0187854_10356866All Organisms → cellular organisms → Bacteria → Acidobacteria617Open in IMG/M
3300017970|Ga0187783_10372179All Organisms → cellular organisms → Bacteria → Acidobacteria1039Open in IMG/M
3300017999|Ga0187767_10369837All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300018006|Ga0187804_10077752All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1338Open in IMG/M
3300018009|Ga0187884_10323450All Organisms → cellular organisms → Bacteria → Acidobacteria623Open in IMG/M
3300018012|Ga0187810_10158880All Organisms → cellular organisms → Bacteria → Acidobacteria909Open in IMG/M
3300018013|Ga0187873_1221833All Organisms → cellular organisms → Bacteria → Acidobacteria703Open in IMG/M
3300018014|Ga0187860_1289865All Organisms → cellular organisms → Bacteria → Acidobacteria637Open in IMG/M
3300018023|Ga0187889_10155704All Organisms → cellular organisms → Bacteria → Acidobacteria1080Open in IMG/M
3300018024|Ga0187881_10278246All Organisms → cellular organisms → Bacteria → Acidobacteria697Open in IMG/M
3300018025|Ga0187885_10376369All Organisms → cellular organisms → Bacteria → Acidobacteria637Open in IMG/M
3300018025|Ga0187885_10456528All Organisms → cellular organisms → Bacteria → Acidobacteria570Open in IMG/M
3300018034|Ga0187863_10079573All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1846Open in IMG/M
3300018037|Ga0187883_10556049All Organisms → cellular organisms → Bacteria → Acidobacteria593Open in IMG/M
3300018057|Ga0187858_10090053All Organisms → cellular organisms → Bacteria → Acidobacteria2107Open in IMG/M
3300018060|Ga0187765_11125739All Organisms → cellular organisms → Bacteria → Acidobacteria546Open in IMG/M
3300018086|Ga0187769_11180434All Organisms → cellular organisms → Bacteria → Acidobacteria579Open in IMG/M
3300018086|Ga0187769_11222078All Organisms → cellular organisms → Bacteria → Acidobacteria568Open in IMG/M
3300018090|Ga0187770_10784887All Organisms → cellular organisms → Bacteria → Acidobacteria762Open in IMG/M
3300020579|Ga0210407_11252656All Organisms → cellular organisms → Bacteria → Acidobacteria556Open in IMG/M
3300020583|Ga0210401_10269826All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1561Open in IMG/M
3300021088|Ga0210404_10221934All Organisms → cellular organisms → Bacteria → Acidobacteria1020Open in IMG/M
3300021181|Ga0210388_10241683All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1584Open in IMG/M
3300021181|Ga0210388_11405581All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300021402|Ga0210385_10079644All Organisms → cellular organisms → Bacteria → Acidobacteria2247Open in IMG/M
3300021403|Ga0210397_10446880All Organisms → cellular organisms → Bacteria → Acidobacteria973Open in IMG/M
3300021404|Ga0210389_11072218All Organisms → cellular organisms → Bacteria → Acidobacteria623Open in IMG/M
3300021407|Ga0210383_10102535All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2408Open in IMG/M
3300021407|Ga0210383_10510036All Organisms → cellular organisms → Bacteria → Acidobacteria1038Open in IMG/M
3300021407|Ga0210383_10575539All Organisms → cellular organisms → Bacteria → Acidobacteria971Open in IMG/M
3300021474|Ga0210390_11457414All Organisms → cellular organisms → Bacteria → Acidobacteria543Open in IMG/M
3300021474|Ga0210390_11584443All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300021475|Ga0210392_10604749All Organisms → cellular organisms → Bacteria → Acidobacteria813Open in IMG/M
3300021861|Ga0213853_11297711All Organisms → cellular organisms → Bacteria → Acidobacteria563Open in IMG/M
3300022523|Ga0242663_1150257All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300022557|Ga0212123_10120251All Organisms → cellular organisms → Bacteria → Acidobacteria2091Open in IMG/M
3300022557|Ga0212123_10264314All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1226Open in IMG/M
3300024049|Ga0233359_1004821All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1349Open in IMG/M
3300024295|Ga0224556_1003094All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4706Open in IMG/M
3300025454|Ga0208039_1070471All Organisms → cellular organisms → Bacteria → Acidobacteria621Open in IMG/M
3300025927|Ga0207687_11540479All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300026014|Ga0208776_1004947All Organisms → cellular organisms → Bacteria → Acidobacteria1107Open in IMG/M
3300026294|Ga0209839_10054930All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1433Open in IMG/M
3300026304|Ga0209240_1297485All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300027000|Ga0207803_1034609All Organisms → cellular organisms → Bacteria → Acidobacteria595Open in IMG/M
3300027117|Ga0209732_1091044All Organisms → cellular organisms → Bacteria → Acidobacteria530Open in IMG/M
3300027641|Ga0208827_1188074All Organisms → cellular organisms → Bacteria → Acidobacteria554Open in IMG/M
3300027674|Ga0209118_1149214All Organisms → cellular organisms → Bacteria → Acidobacteria645Open in IMG/M
3300027680|Ga0207826_1091043All Organisms → cellular organisms → Bacteria → Acidobacteria839Open in IMG/M
3300027729|Ga0209248_10113634All Organisms → cellular organisms → Bacteria → Acidobacteria814Open in IMG/M
3300027738|Ga0208989_10183169All Organisms → cellular organisms → Bacteria → Acidobacteria697Open in IMG/M
3300027812|Ga0209656_10306617All Organisms → cellular organisms → Bacteria → Acidobacteria733Open in IMG/M
3300027829|Ga0209773_10413594All Organisms → cellular organisms → Bacteria → Acidobacteria559Open in IMG/M
3300027884|Ga0209275_10224159All Organisms → cellular organisms → Bacteria1024Open in IMG/M
3300027889|Ga0209380_10263432All Organisms → cellular organisms → Bacteria → Acidobacteria1013Open in IMG/M
3300027903|Ga0209488_10857161All Organisms → cellular organisms → Bacteria → Acidobacteria640Open in IMG/M
3300028013|Ga0265350_107719All Organisms → cellular organisms → Bacteria → Acidobacteria545Open in IMG/M
3300028746|Ga0302233_10089667All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1219Open in IMG/M
3300028773|Ga0302234_10496021All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300028775|Ga0302231_10279045All Organisms → cellular organisms → Bacteria → Acidobacteria700Open in IMG/M
3300028780|Ga0302225_10453727All Organisms → cellular organisms → Bacteria → Acidobacteria600Open in IMG/M
3300028788|Ga0302189_10166806All Organisms → cellular organisms → Bacteria → Acidobacteria941Open in IMG/M
3300028800|Ga0265338_10220937All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1415Open in IMG/M
3300028806|Ga0302221_10386947All Organisms → cellular organisms → Bacteria → Acidobacteria610Open in IMG/M
3300028906|Ga0308309_11149608All Organisms → cellular organisms → Bacteria → Acidobacteria670Open in IMG/M
3300029907|Ga0311329_11046395All Organisms → cellular organisms → Bacteria → Acidobacteria503Open in IMG/M
3300029915|Ga0311358_10743628All Organisms → cellular organisms → Bacteria → Acidobacteria713Open in IMG/M
3300029944|Ga0311352_10989767All Organisms → cellular organisms → Bacteria → Acidobacteria648Open in IMG/M
3300029986|Ga0302188_10345775All Organisms → cellular organisms → Bacteria → Acidobacteria611Open in IMG/M
3300030007|Ga0311338_10270392All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1897Open in IMG/M
3300030580|Ga0311355_10563025All Organisms → cellular organisms → Bacteria → Acidobacteria1082Open in IMG/M
3300031232|Ga0302323_102076785All Organisms → cellular organisms → Bacteria → Acidobacteria646Open in IMG/M
3300031235|Ga0265330_10400522All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300031708|Ga0310686_110535660All Organisms → cellular organisms → Bacteria → Acidobacteria732Open in IMG/M
3300031708|Ga0310686_119467145All Organisms → cellular organisms → Bacteria → Acidobacteria770Open in IMG/M
3300031753|Ga0307477_10242005All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1251Open in IMG/M
3300032160|Ga0311301_12090212All Organisms → cellular organisms → Bacteria → Acidobacteria656Open in IMG/M
3300032180|Ga0307471_102162958All Organisms → cellular organisms → Bacteria → Acidobacteria700Open in IMG/M
3300032180|Ga0307471_104016069All Organisms → cellular organisms → Bacteria → Acidobacteria520Open in IMG/M
3300032205|Ga0307472_102040633All Organisms → cellular organisms → Bacteria → Acidobacteria575Open in IMG/M
3300032770|Ga0335085_11410000All Organisms → cellular organisms → Bacteria → Acidobacteria730Open in IMG/M
3300032892|Ga0335081_11674997All Organisms → cellular organisms → Bacteria → Acidobacteria695Open in IMG/M
3300032892|Ga0335081_12434661All Organisms → cellular organisms → Bacteria → Acidobacteria543Open in IMG/M
3300032955|Ga0335076_11677477All Organisms → cellular organisms → Bacteria → Acidobacteria524Open in IMG/M
3300033134|Ga0335073_11453438All Organisms → cellular organisms → Bacteria → Acidobacteria665Open in IMG/M
3300033158|Ga0335077_11863429All Organisms → cellular organisms → Bacteria → Acidobacteria563Open in IMG/M
3300033289|Ga0310914_10870407All Organisms → cellular organisms → Bacteria → Acidobacteria800Open in IMG/M
3300033402|Ga0326728_10875316All Organisms → cellular organisms → Bacteria → Acidobacteria641Open in IMG/M
3300033755|Ga0371489_0506115All Organisms → cellular organisms → Bacteria → Acidobacteria534Open in IMG/M
3300034199|Ga0370514_066474All Organisms → cellular organisms → Bacteria → Acidobacteria911Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil12.98%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland8.40%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa6.11%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.58%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.58%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil4.58%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil3.82%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland3.82%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.82%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.82%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.05%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.05%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.05%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.05%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog3.05%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.29%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring2.29%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.29%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.53%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.53%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.53%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.53%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.53%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.76%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.76%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.76%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.76%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.76%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.76%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.76%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.76%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.76%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.76%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005886Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205EnvironmentalOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009637Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40EnvironmentalOpen in IMG/M
3300009646Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150EnvironmentalOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011411Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaGHost-AssociatedOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017938Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017999Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MGEnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018014Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018024Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100EnvironmentalOpen in IMG/M
3300018025Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022523Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300024049Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-P30EnvironmentalOpen in IMG/M
3300024295Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5EnvironmentalOpen in IMG/M
3300025454Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026014Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205 (SPAdes)EnvironmentalOpen in IMG/M
3300026294Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300027000Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)EnvironmentalOpen in IMG/M
3300027117Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027641Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027680Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)EnvironmentalOpen in IMG/M
3300027729Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028013Soil microbial communities from Maridalen valley, Oslo, Norway - NSE2EnvironmentalOpen in IMG/M
3300028746Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1EnvironmentalOpen in IMG/M
3300028773Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2EnvironmentalOpen in IMG/M
3300028775Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2EnvironmentalOpen in IMG/M
3300028780Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2EnvironmentalOpen in IMG/M
3300028788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300028806Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029907I_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300029915III_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029986Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1EnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031235Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaGHost-AssociatedOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033755Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fractionEnvironmentalOpen in IMG/M
3300034199Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1008003143300001593Forest SoilHVTGETVRAIIGENQQDAAIDALRREHLRLISIVPVRTSLEAYFVEKLQSAETTAGTTA*
JGI12627J18819_1012791133300001867Forest SoilHVTGETVRAVVSENQQDAAIDALRRERLRLISIVPLRTSLESYFVEKLQHSQTTAGTSA*
Ga0062385_1096579923300004080Bog Forest SoilTGDRVRAVISENQQDAVIDALRRERQRLIAIIPVRTSLEAYFVEKLRRAETSVGSKA*
Ga0062386_10008951713300004152Bog Forest SoilALGAECHVTGDTVRAVIPENQQDAAIDALRRECIRLIALTPLRTSLEAYFVEKLQLSPTATEKTLGTAV*
Ga0066673_1029366713300005175SoilGAECHVTGDRVRAVIADTQQDAAIDALRREHLRLIAIIPLRTSLEAYFVEKLQHSQTTAGTTA*
Ga0066690_1024882313300005177SoilKTLGAECHITGETVRAVISEAQQDAAIDVLRRERLRLISITPVRTSLEEYFVEKLRKAESSAGGAA*
Ga0066388_10722852813300005332Tropical Forest SoilEFHVTGETVRAVVTQNQQDSAIDALRRERLRLISITPLRTSLESYFVEKLQHSQTTAGTSA*
Ga0070713_10116831123300005436Corn, Switchgrass And Miscanthus RhizosphereAAMKALGADCHISGDTVRAAIPETQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQSSQTTAGTSA*
Ga0070731_1007645243300005538Surface SoilMSAEFHVTADKVRAIINENQQDAALDALRRERLRLIAVTPVRTSLEAYFVEKLRHAETTAGTTA*
Ga0070731_1042117123300005538Surface SoilSMKALAAECQVTGETTRAVIAERQQDAAIDALRRERIRLISITPLRTSLEEYFVEKMHHSQQSAGTLA*
Ga0070733_1063282023300005541Surface SoilMKTLGAECHATGDTVRAVIQEGQQDAAIDLLRREHIRLIAITPLRTSLETYFVEKLQHSQTTAGKSA*
Ga0070732_1017790533300005542Surface SoilIKAMGADCHVTGDTVRAIFAQSQQDAAIDALRRERLPLISITPVRTSLEAYFVEKLQRAETTAGSMA*
Ga0070732_1094921713300005542Surface SoilASMKALGAECHISGDTVRAILSENQQDAAIDALRRERIRLIAVTPLRTSLEAYFVEKLQHSQTTAGTLA*
Ga0070761_1035400123300005591SoilALGAECHVTGDRVRATINESQQDAMIDALRRERLRLIAITPVRTSLEAYFVEKLRRAETTAGSSK*
Ga0070763_1002362013300005610SoilALAAECHVTGDTVRAIVDETQQDAAIDALRRERLHLIAITPVRTSLEAYFVEKLRRAETMAGTTV*
Ga0075286_101005233300005886Rice Paddy SoilKSLGAECHVTGDRVRAIIADTQQDAAIDALRREHLRLIAIVPLRTSLEAYFVEKLQHSQTTAGTTA*
Ga0066790_1009800233300005995SoilSLKALGAECHVSGDTIRAILPDNQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQHSQTTAGTMS*
Ga0070716_10086272513300006173Corn, Switchgrass And Miscanthus RhizosphereQVPAAMKALGADCHISGETVRAVVPETQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQSSQTTAGTSA*
Ga0070765_10220012023300006176SoilKALGAECHVTGDRVRAVLPETQQDAAIDALRRERIRLISITPLRTSLEAYFVEKLQHSETSVGTTA*
Ga0097621_10063459213300006237Miscanthus RhizosphereGETVRGVISANQQDAAIDALRRERLRLIAITPLRTSLESYFVEKLQHSQTTAGTTA*
Ga0073928_1031087433300006893Iron-Sulfur Acid SpringSIKALGAECHVTGDHVRTIINENQQDAVIDALRRDRLRLIAITPVRTSLEAYFVEKLRRAETTAGSTV*
Ga0116222_109343833300009521Peatlands SoilLGAECHVTGDTVRAVLPETQQDAAIDALRRERIRLIAITPLRTSLETYFVEKLQHSQTSAGKTS*
Ga0116133_117954713300009623PeatlandSLKALGAECHVSGDTIRAVLAENQQDAAIDALRRERMRLIAITPLRTSLEAYFVEKLQGPQDAGKTVGTAV*
Ga0116118_116589923300009637PeatlandAECHVTGDTVRAIIDENQQDAAIDALRREHLRMIALTPVRTSLEAYFVEKLQRAETTAGRRT*
Ga0116132_113138623300009646PeatlandGAECHVTGDTVLAVIPEGQQDAAIDVLRRERIRLIALTPLRTSLEAYFVEKLQHSQSAAEKTLGTAV*
Ga0116135_105188133300009665PeatlandHVTGDRVRATVNESQQDAMIDALRRERLRLIAITPVRTSLEAYFVEKLRRAETTAGSSL*
Ga0126384_1115472323300010046Tropical Forest SoilGEFHVTGETVRAVVAENQQDAAIDALRRERLRLISITPLRTSLESYFVEKLQHSQTTAGSSA*
Ga0126378_1009498013300010361Tropical Forest SoilGETVRAVVAQNQQDAAIDALRRERLRLISITPLRTSLESYFVEKLQHSQTTAGTSA*
Ga0126379_1038310913300010366Tropical Forest SoilGAEFHVTGETVQAVVSENQQDAAIDVLRRERLRLISITPLRTSLESYFVEKLQHSQTTAGTSA*
Ga0126381_10105733633300010376Tropical Forest SoilSAECHVSGETVRAVIAESQQDAAIDALRRERRRLISVTPLRTSLEQYFVEKLQHSQTTAGTMA*
Ga0126381_10207504013300010376Tropical Forest SoilASMRALSAECHVSGETVRAVIAESQQDAAIDALRRERRRLISVTPLRTSLEQYFVEKLQHSQTTAGTMA*
Ga0136449_10369893523300010379Peatlands SoilHVTGDTVRATISEMQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQPSQNTGTTLGTAAGIKA*
Ga0137393_1014231533300011271Vadose Zone SoilAECHVTGDTVRAVLAESQQDAAIDALRRERIRLIAITPVRTSLEQYFVAKLQGAGTTAGRTA*
Ga0153933_105314713300011411Attine Ant Fungus GardensECHVTGETVRAILSERQQDAAIDALRRERLRLIAITPLRTSLEAYFVEKLQHAQTTAGTRS*
Ga0137390_1178212623300012363Vadose Zone SoilCHVTGDTVRAVLAESQQDAAIDALRRERIRLIAITPVRTSLEQYFVAKLQGAGTTAGRTA
Ga0150984_11259855223300012469Avena Fatua RhizosphereKSLGAECHVTGETVRAVIAESQQDAAIDALRRERLRLISIIPVRTSLESYFVEKLQHSQTTAGTLA*
Ga0137407_1111969413300012930Vadose Zone SoilALGAECHVTGDTVRAILAENQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQHSETTAGKA*
Ga0164299_1091932613300012958SoilAECHVTGETVRGVISANQQDAAIDALRRERLRLIAITPLRTSLESYFVEKLQHSQTTAGTTA*
Ga0182018_1040969323300014489PalsaIKALGAECHVTGDTVRAILPENQQDAAIDALRRERIRLISITPVRTSLEDYFVEKLQRSETTAGRTA*
Ga0182036_1046361713300016270SoilASMKALGAECHVTCETVRAVLPESQQDAAIDALRRERLRLIAITPLRTSLESYFVEKLQSSQTTAGTSK
Ga0187821_1043022823300017936Freshwater SedimentTGDTMRAVIQESQQDAAIDALRRERLRLISLTPVRTSLEQYFVEKTQKADSTARAAV
Ga0187854_1035686623300017938PeatlandSMRALGAECHVTGDTVRAIVDENQQDAAIDALRRERLRMIALTPVRTSLEAYFVEKLQRAETTAGRTT
Ga0187783_1037217923300017970Tropical PeatlandMKALSAECHVSGETVRAVIAESQQDAAIDALRRERRRLISVTPLRTSLEQYFVEKLQHSQTTAGTTA
Ga0187767_1036983723300017999Tropical PeatlandAPASMKALGADCHVTGETVRAVLPESQQDAAIDALRRERLRLIAITPLRTSLESYFVEKLQHSQTTAGTTA
Ga0187804_1007775233300018006Freshwater SedimentAECHVTGDTVRAIISESQQDAAIDALRRERMRLIAITPVRTSLEAYFVEKLRRAETTAGTTA
Ga0187884_1032345023300018009PeatlandPTSMRALGAECHVTGDTVRAIIDENQQDAAIDALRRERLRMIALTPVRTSLEAYFVEKLQRAETTAGRTT
Ga0187810_1015888013300018012Freshwater SedimentTGDTVRAVIPESQQDAAIDALRREHLRLIAITPLRTSLEAYFVEKLQHSQTTAGTTK
Ga0187873_122183323300018013PeatlandADCHVTGDTVRGVLPERQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQHSQTTAGKTS
Ga0187860_128986523300018014PeatlandASMKALGAECHVTGDTVRAIISETQQDAAIDALRREGLRLIALTPVRTSLEAYFVEKLQHAETTAGRTT
Ga0187889_1015570433300018023PeatlandKALGAECHVTGDTVRAIISETQQDAAIDALRREGLRLIALTPVRTSLEAYFVEKLQHAETTAGRTT
Ga0187881_1027824623300018024PeatlandRALGAECHVTGDTVRAIIDESQQDGAIDALRRERLRMIALTPVRTSLEAYFVERLQRAETTAGKTV
Ga0187885_1037636913300018025PeatlandALGAECHITGDTVRAIINENQQDAVIDALRRERLRLIAIIPVRTSLEAYFVEKLQHAETTAGRMA
Ga0187885_1045652813300018025PeatlandCHITGDTVRAIVDENQQDAAIDALRRERLHLIALTPVRTSLEAYFVEKLRRAETTAGRTL
Ga0187863_1007957333300018034PeatlandALGAECHVTGDTVRAVIPENQQDAAIDALRRERIRLIALTPLRTSLEAYFVEKLQTTPTQNAAGKTVGAV
Ga0187883_1055604923300018037PeatlandVTGDTVRAIIDESQQDAAIDALRREHLRLIAITPVRTSLEAYFVEKLQRAETTAGTTA
Ga0187858_1009005343300018057PeatlandSMKALGAECHVTGDTVRAIISETQQDAAIDALRRERLRLIALTPVRTSLEAYFVEKLQHAETTAGRTT
Ga0187765_1112573923300018060Tropical PeatlandLGAECYVSSDTVRAVINEGQQDGAIDALRRERIRLIAITPLRTSLEAYFVEKLQSSQTSAGTSA
Ga0187769_1118043413300018086Tropical PeatlandIKALGAECHLTGDTVRAVLPENQQDAAIDALRRERMRLIAITPLRASLEDYFVEKLQHAQTAAETSLSTTVEIKA
Ga0187769_1122207813300018086Tropical PeatlandGAECHVSGDRVRAIINENQQDAIIDALRRERQRLIAITPVRTSLEAYFVEKLRRAETTAGTTV
Ga0187770_1078488713300018090Tropical PeatlandTLGAECHVTGDTVRAVLAESQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQTTAAATAGTVAGTQA
Ga0210407_1125265613300020579SoilKALGAECHVTGDTVRTIIDEGQQDAAVDALRRERLRLIALTPVRTSLEAYFVEKLQYAETSAGRTA
Ga0210401_1026982633300020583SoilKALGAECHVTGDRVRAIIAEGQQDAMIDALRRERLRLIAITPVRTSLEAYFVEKLKRAETTAGTTA
Ga0210404_1022193413300021088SoilGSMKALGGEFHVTGETVRIVISESQQDAAIDALRRERLRLISIIPVRTSLESYFVEKLQHSQTTAGTSA
Ga0210388_1024168333300021181SoilHVTGDRVRAVIAENQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQAPAAAGKTAGVNG
Ga0210388_1140558113300021181SoilCHVTGDTVRAVLPENQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQQPTSAGKTVGTAV
Ga0210385_1007964413300021402SoilDCHVTGDTVRTIIKENQIDAAIDALRREHLRLIAITPVRTSLEAYFVEKLQHVETTAGTT
Ga0210397_1044688023300021403SoilPASMRALTTECHVTGETTRAVIAERQQDAAIDALRRERIRLIAITPLRTSLEEYFVEKLQHSQQTAGTLA
Ga0210389_1107221813300021404SoilGAECHVTGDRVRAVIAENQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQAPPVAAGKTAGVNG
Ga0210383_1010253513300021407SoilECHVTGDTVRAVLPENQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQQSPTTAGKTWGTAV
Ga0210383_1051003613300021407SoilASIKALGAEIHVPPDRVRAIIDESQQDAVIDALRRERQRLVAITPVRTSLEAYFVEKLRHAETSVGSKA
Ga0210383_1057553923300021407SoilECHVTGDTVRAVLPENQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQTSSSETLAASTAGKTLGTAV
Ga0210390_1145741423300021474SoilLGGEFHVTGETVRTVISESQQDAAIDALRRERLRLISVIPVRTSLESYFVEKLQHSQTTAGTSA
Ga0210390_1158444313300021474SoilGDTVRAVLAENQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQPSQATAGKTVGTAV
Ga0210392_1060474923300021475SoilPASIKALGAQCHVTGDRVRAIIAENQQDAVIDALRRERQRLIAITPVRTSLEAYFVEKLQHAETTAGRAV
Ga0213853_1129771113300021861WatershedsGDTVRAMLPENQQDAAIDALRRERIRLIAVTPLRTSLEAYFVEKLQHSETAVGTAMGNVR
Ga0242663_115025723300022523SoilSMKALGAEFHVTGETVRTMISESQQDAAVDALRRERLRLISIIPVRTSLESYFVEKLQHSQTTAGTSA
Ga0212123_1012025113300022557Iron-Sulfur Acid SpringAECHVTGDRVRAILPEKQQDAAIDSLRRERIRLVAITPLRTSLEAYFVEKLQRSQTTAGKTS
Ga0212123_1026431413300022557Iron-Sulfur Acid SpringASMKALGAECHVTGDTVRAVLAENQQDLAIDVLRRERIRLIAITPVRTSLEEYFVEKLRRAETSVGSPA
Ga0233359_100482113300024049SoilVSGDRVRVIVEENQQDMVIDILRRERQRLVAVIPVRTSLEAYFVEKLRGAETTAGSTI
Ga0224556_100309413300024295SoilTGDTVRAVIPENQQDAAIDALRRERIRLIALTPLRTSLEAYFVEKLQTTPTQNAAGKTVGAV
Ga0208039_107047113300025454PeatlandECHLTGDTVRAIIDESQQDGAIDALRRERLRMIALTPVRTSLEAYFVERLQRAETTAGKT
Ga0207687_1154047913300025927Miscanthus RhizosphereKSLGAECHVTGDRVRAVIADTQQDAAIDALRREHLRLIAIIPLRTSLEAYFVEKLQHSQTTAGTTA
Ga0208776_100494713300026014Rice Paddy SoilKSLGAECHVTGDRVRAIIADTQQDAAIDALRREHLRLIAIVPLRTSLEAYFVEKLQHSQTTAGTTA
Ga0209839_1005493013300026294SoilSLKALGAECHVSGDTIRAILPDNQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQHSQTTAGTMS
Ga0209240_129748513300026304Grasslands SoilHVSGDTVRAVLAENQQDAAIDVLRRERIRMISITPVRTSLEEYFVAKLQGAGTTAGRTA
Ga0207803_103460923300027000Tropical Forest SoilMKALGAECHVTGDTVRAVLAENQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQHSQTTAGTTA
Ga0209732_109104413300027117Forest SoilMKALGAECHVSGDRVRAVLNENQQDAAIDGLRRERMRLIAITPLRTSLEAYYVEKMQRPETSAGKSAGGAA
Ga0208827_118807423300027641Peatlands SoilADCHITGDTVRAVIDESQQDAAIDALRRERMHLIALTPVRTSLEAYFVEKLQRAETSAGRTT
Ga0209118_114921413300027674Forest SoilAEFHVTGDTVRTVLAENQQDAAIDALRRERIRLIAITPVRTSLEEYFVAKLQGAGTTAGRTA
Ga0207826_109104323300027680Tropical Forest SoilKALGAECKLSGDTVRAVIAENQQDAAIDTLRGERLKLISITPLRTSLEQYFIEKMKSSEKSAGANV
Ga0209248_1011363413300027729Bog Forest SoilDTIRAVLAENQQDAAIDALRREHLRLIALTPLRTSLEAYFVEKLQRAETSAGTTAGGKA
Ga0208989_1018316913300027738Forest SoilAVGAECHVTGDTVRAVLPENQQDAAIDALRREHIRLIAITPVRTSLEEYFVAKLQGAGTTAGRTT
Ga0209656_1030661713300027812Bog Forest SoilHVTGDRVRTIINENQQDAVIDALRREKQRLIAITPVRTSLEAYFVEKLRRAETTAGSTT
Ga0209773_1041359413300027829Bog Forest SoilVPASMKALAAECHITGDTVRAVISQSQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKMQQPGKMGTTA
Ga0209275_1022415913300027884SoilASMKAMGAECHVTGDTVRAVLPENQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQQPSSAGKTVGTAV
Ga0209380_1026343223300027889SoilKALGAECHATGETVTAVIPESQQDAAIDALRRERIRLIALTPLRTSLEAYFVEKLQSPQDSSGKTLGTAV
Ga0209488_1085716123300027903Vadose Zone SoilKTLGAECHVTGDRVRAIIDENQQDAMIDALRRERQRLVAVIPVRTSLEAYFVEKLRRAETTAGSTA
Ga0265350_10771923300028013SoilTGDTVRAIIDETQQDAAIDALRRERLRLVSLLPVRTSLETYFVEKLRRAETTAASTF
Ga0302233_1008966713300028746PalsaAQYHVTGDTVRAVLPENQQDAAIDALRRERIRLIAITPVRTSLEDYFVEKLQRAETTAGRIA
Ga0302234_1049602113300028773PalsaLGAECHVSGDTIRAVLAENQQDAAIDALRREHLRLIALTPLRTSLEAYFVEKLQRAETGAGGAS
Ga0302231_1027904513300028775PalsaKALGVECHVTGDTVRAVIAENQQDAAIDALRRDHQRLIAITPVRTSLEAYFVEKLQHAETTAGRIA
Ga0302225_1045372713300028780PalsaCHVTGDTVRAIIGENQQDAAIDALRRERLRLISIVPVRTSLEAYFVEKLQRAETTAGRTA
Ga0302189_1016680623300028788BogGSECHVTGDTVRAILDESQQDAAIDALRRERLKLIALTPVRTSLESYFVEKLQRAETSAASTV
Ga0265338_1022093733300028800RhizosphereGAECHVTGDTVRAIVPEKQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQNSQGVTGKTVGTAV
Ga0302221_1038694713300028806PalsaLGAGCHVTGDRVRATINESQQDAIIDALRRERLRLIAITPVRTSLEAYFVEKLRRAETTAGSTK
Ga0308309_1114960813300028906SoilECHITGDTVRAVIPESQQDAAIDALRRERIRLIALTPLRTSLEAYFVEKLQHTASAAEKTLGTAV
Ga0311329_1104639523300029907BogPASMKALGSECHVTGDTVRAILDESQQDAAIDALRRERLKLIALTPVRTSLESYFVEKLQRAETSAASTV
Ga0311358_1074362813300029915BogKALGAECHVTGDTVRAIINENQQDAVIDALRRERLRLIAIIPVRTSLEAYFVEKLQHAETTAGRTA
Ga0311352_1098976723300029944PalsaSLKALGAECHVTGDRVRAVLPEGQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQHSETSVGTTA
Ga0302188_1034577523300029986BogLGAECHVTGDTVRAIINENQQDAAIDALRRERLRLIAIIPVRTSLEAYFVEKLQHAETTAGRTA
Ga0311338_1027039213300030007PalsaAECHVSGDTIRAVLAENQQDAAIDALRREHLRLIALTPLRTSLEAYFVEKLQRAETSAGGAS
Ga0311355_1056302513300030580PalsaATLKAAGAECHVTGDRVRAIIDESQQDAVIDALRRERLRLIAITPVRTSLEAYFVEKLRRAETTAGSSV
Ga0302323_10207678513300031232FenALGAECHITGDTVRAVLPESQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQTSQTTAGATS
Ga0265330_1040052223300031235RhizosphereGAECHVTGDTVRAVLPESQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKMQHSQTAGKTS
Ga0310686_11053566013300031708SoilVTGDTVRAVIPENQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQDSAAQNATGKTLGTAV
Ga0310686_11946714523300031708SoilVTGDTVRAIIDETQQDAAIDALRRERLRLVSLLPVRTSLETYFVEKLRRAETTAASTF
Ga0307477_1024200513300031753Hardwood Forest SoilPASIKAMGAECHVTGDTVRAVISETQQDAAIDALRRERLRLISLTPVRTSLEEYFVEKMRKADSTAGGAA
Ga0311301_1209021223300032160Peatlands SoilTGDRVRAVIAENQQDAAIDALRREHIRLIAITPLRTSLEAYFVEKLQHSQTTAGTTA
Ga0307471_10216295813300032180Hardwood Forest SoilASMKALGAEFHVTGDTVRAVIAESQQDAAIDALRRERLRLISITPVRTSLESYFVEKLQHSQTTAGTLA
Ga0307471_10401606913300032180Hardwood Forest SoilKTLGAECHVTGETVRAVITENQQDAAIDALRREHIRLIAITPLRTSLEAYFVEKLQHSQTAVGTAMGNGR
Ga0307472_10204063323300032205Hardwood Forest SoilKALGGEFHVTGETVRTVISESQQDAAIDALRREHLRLISIIPLRTSLESYFVEKLQHSQTTAGTSA
Ga0335085_1141000023300032770SoilAECHATGETVRAILPESQQDAAIDALRRERLRLIAIIPLRTSLETYFVEKLQHSQTTAGTSK
Ga0335081_1167499723300032892SoilHVSGETVRGVMSERQQDAAIDALRRERMRLISITPLRTSLESYFVEKLQHSKTTAGTLV
Ga0335081_1243466123300032892SoilPDCHITGDTVRAVISESQQDAAIDALRRERIRLIAITPLRTSLEAYFVEKLQSSQKTAGSST
Ga0335076_1167747713300032955SoilKALTSEYHVSGDTVRAIVAENQQDAAIDALRRERMRLLAITPLRTSLETYFVEKLQSQRTAGTTA
Ga0335073_1145343813300033134SoilAECHVSGETVRGVMSERQQDAAIDALRRERMRLISITPLRTSLESYFVEKLQHSKTTAGTLV
Ga0335077_1186342923300033158SoilADCHVTGDTVRAVIQENQQDAAIDALRRERMRLIAITPLRTSLEAYFVEKLQHSQTTAGTSV
Ga0310914_1087040713300033289SoilGAECHVTGETVRAVLPESQQDAAIDALRRERLRLIAITPLRTSLESYFVEKLQSSQTTAGTSK
Ga0326728_1087531623300033402Peat SoilECHITGDTVRAVIPENQQDSAIDALRRERIRLVALTPLRTSLEAYFVEKLQHSQTTAGKA
Ga0371489_0506115_305_5083300033755Peat SoilMKALGADCHITGDTVRAIIDERQQDAAIDALRRERLRLIALTPMRTSLEAYFVEKLQRAETTAGSRA
Ga0370514_066474_2_1933300034199Untreated Peat SoilGAECHVTGDRVRATINESQQDAMIDALRRERLRLIAITPVRTSLEAYFVEKLRRAETTAGSSI

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.