Metagenome Family F062116

Basic Information
Family ID	F062116
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	49 residues
Representative Sequence	MSEANAKLKERVRAFWQENPCGTKFADAPPGSRRFYELVETHRYTKEWHI
Number of Associated Samples	118
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (9.924 % of family members)
Environment Ontology (ENVO)	Unclassified (51.908 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (67.176 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.59% β-sheet: 0.00% Coil/Unstructured: 56.41%
Feature Viewer

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Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF00486	Trans_reg_C	24.43
PF01161	PBP	4.58
PF10825	DUF2752	3.82
PF04052	TolB_N	3.82
PF06267	DUF1028	3.05
PF00733	Asn_synthase	3.05
PF13432	TPR_16	1.53
PF04505	CD225	1.53
PF06841	Phage_T4_gp19	0.76
PF00534	Glycos_transf_1	0.76
PF00903	Glyoxalase	0.76
PF13620	CarboxypepD_reg	0.76
PF13466	STAS_2	0.76
PF13414	TPR_11	0.76
PF13692	Glyco_trans_1_4	0.76
PF10049	DUF2283	0.76
PF08206	OB_RNB	0.76
PF13676	TIR_2	0.76
PF05154	TM2	0.76
PF02597	ThiS	0.76
PF13492	GAF_3	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	4.58
COG0823	Periplasmic component TolB of the Tol biopolymer transport system	Intracellular trafficking, secretion, and vesicular transport [U]	3.82
COG3342	Uncharacterized conserved protein, Ntn-hydrolase superfamily	General function prediction only [R]	3.05
COG0557	Exoribonuclease R	Transcription [K]	0.76
COG1158	Transcription termination factor Rho	Transcription [K]	0.76
COG1278	Cold shock protein, CspA family	Transcription [K]	0.76
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.76
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.76
COG2314	Uncharacterized membrane protein YozV, TM2 domain, contains pTyr	General function prediction only [R]	0.76
COG4776	Exoribonuclease II	Transcription [K]	0.76

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.02%
Host-Associated	Host-Associated	41.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.96%
Plants	Host-Associated → Plants	41.98%
Aquatic	Environmental → Aquatic	3.05%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.32%
Freshwater	Environmental → Aquatic → Freshwater	1.53%
Sediment	Environmental → Aquatic → Sediment	1.53%
Floodplain	Environmental → Terrestrial → Floodplain	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.27%
Loam	Environmental → Terrestrial → Soil → Loam	12.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.58%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.05%
Ice	Environmental → Aquatic → Freshwater → Ice	1.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.53%
Sand	Environmental → Terrestrial → Soil → Sand	0.76%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.76%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.05%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.76%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.76%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.58%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.05%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.29%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.29%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.53%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.53%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.53%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.53%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.76%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013760	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015069	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4C, Ice margin, adjacent to proglacial lake	Environmental	Open in IMG/M
3300015084	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-5a, rocky medial moraine)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018946	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1002554593	3300000955	Soil	MANNADLKERVREFWQQHPCGTKFSDAAMGSHEFFE
JGI10216J12902_1101353042	3300000956	Soil	MKDNNLKERVRAFWQANPCGVKFADAAPGTRHFYELVEAHRYTKEWHIP
Ga0062592_1022107551	3300004480	Soil	MSDSTLKERVRAFWQENPCGTKFADAPPGSRKFYELVEEHRYTKEWHIPA
Ga0062594_1014311552	3300005093	Soil	VSDSNNNLKERVRAFWQEHPCGTKFADAEPGSPRFYELVEEHRYSKEWHIPAA
Ga0065704_100136271	3300005289	Switchgrass Rhizosphere	MFEMSQHDSILKERVRAFWQQNPCGTKFADAPPGSRRFYELVEEHRFKKEWHIPVAAG
Ga0065712_101585321	3300005290	Miscanthus Rhizosphere	MAMNNATLKERVRAFWQENPCGTKFADAPPGSRRFYELVESHRYDKEWHIPY
Ga0065715_104862772	3300005293	Miscanthus Rhizosphere	MAENNSILKERVRAFWQENPCGTKFADAPPGSRRFYELVE
Ga0065705_100763991	3300005294	Switchgrass Rhizosphere	MSENSSTLKERVRAFWQENPCGTKFADASPGTRRFYELVEEHRYKKEWHIP
Ga0065705_107254332	3300005294	Switchgrass Rhizosphere	MSENNATLKERVRAFWQENPCGTKFADAPPGSRKFYELVE
Ga0070680_1002313461	3300005336	Corn Rhizosphere	MSESNAQLKDRVRDFWQNHPCGSKFADARPGSRIFYEVIEQHRYE
Ga0068868_1003512552	3300005338	Miscanthus Rhizosphere	MAQDNSILKERVRAFWQQNPCGTKFADASPGSRRFYELVEEHRYKK
Ga0070692_105662521	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MSENSSTLKERVRAFWQENPCGTKFADAPPGSRRFYELVEEHR
Ga0070692_110286522	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MFFHCYSSTFDMAQDNSILKERVRAFWQQNPCGTKFADASPGSRRFYELVEEHRYKKEWHIP
Ga0070669_1010661901	3300005353	Switchgrass Rhizosphere	MSESNSQIKERVRAFWQANPCGTKFADAEPGSRRFFELVEQHSYETEWHIPGAADF
Ga0070703_102753751	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MLENNFTLKDRVRAFWQENPCGTKFADAPPGSRRFYELVEEHRYDKEWHI
Ga0070694_1004346682	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MVDANAKLKDRVRAFWQANPCGVKFADARPGTRRFYELVATHRYTKEWHIPLA
Ga0070694_1008575671	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSEANAKLKERVRAFWQENPCGTKFADAPPGSRRFYELVETHRYTKEWHI
Ga0070681_118215781	3300005458	Corn Rhizosphere	MAQNDSTLKERVRAFWQENPCGTKFADASPGSRRFYELVEDHRYKKEWHIPTAA
Ga0068867_1023617941	3300005459	Miscanthus Rhizosphere	MFDMAQDNSILKERVRAFWQQNPCGTKFADASPGSRRFYELVEEHRYKK
Ga0070706_1020549072	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MADRNNNLKERVRAFWQANPCGVKFADAAPGTRHFYELVEAHRYTKEWH
Ga0070697_1008826803	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSERNSMLKERVRVFWQENPCGTKFADAPPGSRRFYELVEEHRYSK
Ga0070693_1003974942	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MKERVRVFWQENPCGTKFADAPPGSRRFYELVEEHRYLKEWHIPTAAGFADAKDLA
Ga0070704_1011100822	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MNVENSNLKERVRAFWQANPCGVKFADAAPGTRHFYELVEAHRYTKEWHIPAAADFA
Ga0066693_104965001	3300005566	Soil	MVDVGQSLKERVRAFWQEHPCGTKFADAEVGSRRFFE
Ga0068854_1006555322	3300005578	Corn Rhizosphere	MAQDNSILKERVRAFWQQNPCGTKFADASPGSRRFYELVEEHRYKKEW
Ga0070702_1002953131	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MLENNFTLKDRVRAFWQENPCGTKFADAPPGSRKFYELVEEHRYSKEWHIPIAAGF
Ga0070702_1012077032	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VRAFWQANPCGVKFADAPPGTRRFYELVEAHRYTKEWHIPAAANFASARG
Ga0068852_1014530731	3300005616	Corn Rhizosphere	MSENSSTLKERVRAFWQENPCGTKFADAPPGSRRFYELVEEHRYKKEWHIPTAAGFAQT
Ga0068864_1009960602	3300005618	Switchgrass Rhizosphere	MAESNSTLKDRVRAFWQENPCGTKFADAPPGSRKFYELIEQHRYDKEWHIPAAAGFSQSK
Ga0068866_106330291	3300005718	Miscanthus Rhizosphere	MSVDKSNLKERVRAFWQANPCGVKFADAAPGTRHFYELVEAHRYTKEWHIPEAADF
Ga0068861_1002336682	3300005719	Switchgrass Rhizosphere	MSQSNSILKDRVRAFWQQNPCGTKFADAPPGSRRFYELVEEHRYTKEWH
Ga0068851_109085931	3300005834	Corn Rhizosphere	MSERNPILKERVRVFWQENPCGTKFADAPPGSRRFYELVEEHRYLKEWHIPTA
Ga0068863_1000828051	3300005841	Switchgrass Rhizosphere	MAENNSILKERVRAFWQEHPCGTKFADAPPGSRRFYEL
Ga0068858_1012169361	3300005842	Switchgrass Rhizosphere	MLENNFTLKDRVRAFWQENPCGTKFADAPPGSRKFYELVEEHRYTKEWHIPIAA
Ga0081539_101609641	3300005985	Tabebuia Heterophylla Rhizosphere	MLENNFTLKDRVRAFWQENPCGRKFADAPPGSRKFYELVEQHRYDK
Ga0075417_107302582	3300006049	Populus Rhizosphere	MSENSSTLKERVRAFWQENPCGTKFADAPPGSRRFYELVEEHRYAKEWHIPEAAGF
Ga0070716_1001005341	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSEANSQLKERVREFWQEHPCGTKFADAEPGSRKFYEL
Ga0097621_1006551802	3300006237	Miscanthus Rhizosphere	MLENNFTLKDRVRAFWQENPCGTKFADAPPGSRKFYEL
Ga0079222_102604931	3300006755	Agricultural Soil	MSENSSTLKDRVRSFWQENPCGTKFADAPPGSRRFYELVEEHRYTKEWHIPAA
Ga0079222_109557531	3300006755	Agricultural Soil	MSERNSILKERVRVFWQENPCGTKFADAPPGSRRFYELVEEHRYRKEWHIPAAAGFEQ
Ga0075429_1005808262	3300006880	Populus Rhizosphere	MLKERVRVFWQENPCGTKFADAPPGSRRFYELVEEHRYRKEWHI
Ga0079216_100556662	3300006918	Agricultural Soil	MSEANSQLKERVRAFWQEHPCGTKFADAEPGSRKFYELV
Ga0079218_100075029	3300007004	Agricultural Soil	MSDSNNLKDRVRAFWQANPCGTKFADAPPGTPRFYELVEEHRYRKEWHIPQAAGFT
Ga0079218_123941781	3300007004	Agricultural Soil	MAAENSTLKERVRRFWQEHPCGTKFADAEPGSRRFYELVE
Ga0099827_117175222	3300009090	Vadose Zone Soil	MKQDLQNQQNAKLKERVRAFWQANPCGIKFADAAPGTRRFYELV
Ga0105245_122940192	3300009098	Miscanthus Rhizosphere	MSEANAKLKERVRAFWQENPCGTKFADAPPGSRRFYELVETHRYTKE
Ga0105245_126373242	3300009098	Miscanthus Rhizosphere	MVDANAKLKDRVRAFWQANPCGVKFADARPGTRRFY
Ga0075418_112447802	3300009100	Populus Rhizosphere	MTATIDNIELKERVRQFWQEHPCGTKFADALPGSRRFYELVE
Ga0105242_133298321	3300009176	Miscanthus Rhizosphere	MSERNSILKERVRVFWQENPCGTKFADAPPGSRKFYELVEEHRYRKEWHI
Ga0105248_107872171	3300009177	Switchgrass Rhizosphere	MLENNFTLKDRVRAFWQENPCGTKFADAPPGSRKFYELVEEHRYAKEWHIPVAAGF
Ga0105248_126487212	3300009177	Switchgrass Rhizosphere	MSGNAELKERVREFWQQHPCGTKFSDAAMGSREFFE
Ga0105248_132824152	3300009177	Switchgrass Rhizosphere	MSESNAQLKDRVRDFWQNHPCGSKFADARPGSRIFY
Ga0105237_120711612	3300009545	Corn Rhizosphere	MSQANAQLKERVRAFWQENPCGTKFADAPPGSKKF
Ga0126304_101886542	3300010037	Serpentine Soil	MSEQNPKLKERVRAFWQEHPCGTKFADAEPGSRRFYELVEEHRYKKEWHIPAAARF
Ga0126309_109152301	3300010039	Serpentine Soil	MADERQSLKERVRAFWQEHPCGTKFADAEVGSRAFFDA
Ga0126308_102954172	3300010040	Serpentine Soil	MSEENSKLKERVRAFWQEHPCGIKFADAEPGSRRFYELVEEHRYKKEWHIPAAAGFS
Ga0126308_112089311	3300010040	Serpentine Soil	MSAENSTLKERVRRFWQEHPCGTKFADAEPGSRRFYELVEEHR
Ga0126312_105347682	3300010041	Serpentine Soil	MFFGCYSFRFDMPQNNSILKERVRAFWQQNPCGTKFADAPPGSRSFFELVEEHRYKKEWH
Ga0126382_117029572	3300010047	Tropical Forest Soil	MSDEQAQLKERVRAFWQANPCGIKFAEAELGTRGFFELVEQHRYATEWHI
Ga0126370_106911821	3300010358	Tropical Forest Soil	MSERNSILKERVRVFWQENPCGTKFADAPPGSRRFYELVEEHRYRKEWHIPAAAGFDQT
Ga0134126_112395731	3300010396	Terrestrial Soil	MSEQLKERVRAFWEEEPCGTKTADAQPGTREFFDQ
Ga0134127_128730831	3300010399	Terrestrial Soil	MSDSNAKLKERVRAFWQANPCGVKFADAAPGTRHFYELVEAHRYTKEWHIPIAADFAAARGL
Ga0134121_103866081	3300010401	Terrestrial Soil	VRAFWQENPCGTKFADAPPGSHKFYELVEEHRYTKEW
Ga0105246_100111631	3300011119	Miscanthus Rhizosphere	MLENNFTLKDRVRAFWQENPCGTKFADAPPGSHKFYELVEEHRYTKEWHIPIAAGFSQSK
Ga0137442_11550771	3300011414	Soil	MPNPDNNLKERVRAFWQANPCGVKFADAAPGTRHFYELVEAHRYTKEWHIPA
Ga0137438_10177811	3300011431	Soil	MADLKERVCAFWQANPGGVKFADAAPGTRHFYELVEAHSYTKEWHIPSAADFRSARG
Ga0136623_100179571	3300012045	Polar Desert Sand	MTELNANLKERVRAFWQANPCGVKFNDAEPGTLHFYELVEAHRYTK
Ga0137364_103568361	3300012198	Vadose Zone Soil	MSDSNANLKEKVRAFWQANPCGTKFGDANPGTRPFYELVEKHRYTKEWHIPG
Ga0137381_113529131	3300012207	Vadose Zone Soil	MFDFNSTLKSRVRAFWEANPCGLKFADVEPGSRLFYELVEAHRYTKEWHIPIAADFASAGGL
Ga0137376_106113883	3300012208	Vadose Zone Soil	MSDANQNLKERVRAFWQANPCGVKFADAEPGTRRFYELVEAHR
Ga0137376_114921012	3300012208	Vadose Zone Soil	MPDPNANLKERVRAFWQANPCGVKFADAAPGTRRFYELVEAHRYTSEWHIPMAADFVSTGGL
Ga0137366_108365141	3300012354	Vadose Zone Soil	MSDPNENLKERVRAFWQANPCGIKFGDAPPGTRQFYE
Ga0137368_102447721	3300012358	Vadose Zone Soil	MSNQELKERVLAFWQANPCGVKFADAAPGTRHFYELVEAHRYTKEWHIPIAAEF
Ga0137375_103749351	3300012360	Vadose Zone Soil	MSNQELKERVLAFWQANPCGVKFADAAPGTRHFYELVEAHRYTKEWHIPIAAEFRSS
Ga0157330_10419131	3300012514	Soil	MIRRSKIRYPANFEMAEANAKLKERVRAFWQENPCGTKFADAPPGSRRFYELV
Ga0137358_107645942	3300012582	Vadose Zone Soil	MSITENSLKDRVRAFWQENPCGTKFSDAEPGTRLFYERVEQHR
Ga0136613_107378112	3300012681	Polar Desert Sand	MSNNGNNLKEQVRAFWQANPCGTKFTDAETGSREFYERVA
Ga0137416_108384082	3300012927	Vadose Zone Soil	MISFPAFNMSDENAKLKERVRAFWQEHPCGTKFADANPGTRRFYELVEEHRYQKEWHIPD
Ga0137404_121923631	3300012929	Vadose Zone Soil	MAQQNSQLKERVRAFWQANPCGVKFAEAAPGTRRFYELVEAHRYTKEWHIPAAADFAGAR
Ga0164300_107503951	3300012951	Soil	MSDANQNLKERVRAFWQANPCCLKFADAEPGSRRFYELVEAHRYA
Ga0164299_109433841	3300012958	Soil	MISRAKIRYPAHFEMLEANAKLKERVLSFWQETPCGTKFADAPPGSRRFYELVEDHRYTKEWHIPAAAGF
Ga0157378_101781542	3300013297	Miscanthus Rhizosphere	MSESHAQLKDRVRDFWQNHPCGSKFADARPGSRIFYEVIEQHRYEKEWHIPAAAGFDK
Ga0163162_100316638	3300013306	Switchgrass Rhizosphere	MSDANQNLKERVRAFWQANPCGVKFADAEPGSRRFYELVEAHRYAKEWHIPAAADFAGAR
Ga0120188_10474311	3300013760	Terrestrial	MAEQNSRLKERVRAFWQEHPCGTKFADAPPGSRKFFELV
Ga0157380_130333391	3300014326	Switchgrass Rhizosphere	MLENNFTLKDRVRAFWQENPCGTKFADAPPGSRRFYELVEEHRYDKEW
Ga0182001_100256791	3300014488	Soil	MADAMHNLKERVRAFWQANPCGTKFADAEVGTREFFRRVEEHRYRTEWHIP
Ga0182001_105707071	3300014488	Soil	MSDNSSTLKERVRAFWQENPCGTKFADAPPGSRRFYELVEEHRYKKEWHIPAAAGFVH
Ga0157379_102639572	3300014968	Switchgrass Rhizosphere	MFFHCYSATFDMSQNNSILKERVRAFWQQNPCGTKFADASPGSRRFYELVEEHRYK
Ga0167633_1036831	3300015069	Glacier Forefield Soil	MPNRNDNLKERVRAFWQANPCGVKFADAAPGTRHFYELVE
Ga0167654_10159191	3300015084	Glacier Forefield Soil	MSDASANLKERVRAFWQANPCGVKFADALPGTRRFYELVEEHRYTKEWHIPEAAGFDKTKGLKML
Ga0137403_101250611	3300015264	Vadose Zone Soil	MSIENSNLKERVRAFWQANPCGVKFADAAPGTRHFYELVEAHRYTK
Ga0132258_134404251	3300015371	Arabidopsis Rhizosphere	MMEGIKANAELKERVRAFWQEHPCGTKFADAEPGSR
Ga0132257_1045461521	3300015373	Arabidopsis Rhizosphere	MFEMSQHDSILKERVRAFWQQNPCGTKFADAPPGSRRFYELV
Ga0132255_1037598691	3300015374	Arabidopsis Rhizosphere	MAQNDSILKERVRAFWQENPCGTKFADASPGSLRFYELVEEHRYKKEWHIPTAAG
Ga0182039_105658041	3300016422	Soil	VSEYSDNSHAANDELKRRVRAFWQEHPCGSKFSDAETGTREFFRRIENHRYEKEWHIPAAADFGA
Ga0163161_104284662	3300017792	Switchgrass Rhizosphere	MFSTSANAELKERVRQFWQEHPCGTKFADASPGSRRFYELVEEHR
Ga0190269_103164481	3300018465	Soil	MADERQSLKERVRAFWQEHPCGTKFADAEVGSRAFYGA
Ga0190270_110108571	3300018469	Soil	MAEENSKLKDRVREFWQEHPCGTKFADAEPGSRRFYELV
Ga0190274_105372132	3300018476	Soil	MSENSSTLKERVRAFWQENPCGTKFADAPPGSRRFYELVEEH
Ga0193599_10395011	3300018946	Soil	MNDNGNSLKEEVRAFWQANPCGTKFTDAEVGSREF
Ga0190267_113846261	3300019767	Soil	MSEAQQSLKDRVRAFWQANPCGTKFADAAPGTRLFYE
Ga0193739_10827561	3300020003	Soil	MSESNSNLKERVRAFWQANPCGVKFADAAPGTRRFYELV
Ga0179594_103548562	3300020170	Vadose Zone Soil	MNVENSNLKERVRAFWQANPCGVKFADAAPGTRHFY
Ga0207654_106760482	3300025911	Corn Rhizosphere	MLENNFTLKDRVRAFWQENPCGTKFADAPPGSRKFYELVEEHRYTKEWHIPIAAG
Ga0207660_101413262	3300025917	Corn Rhizosphere	MSESNAQLKDRVRDFWQNHPCGSKFADARPGSRIFYEVIEQHRYEKEWHIPAAAGFDK
Ga0207681_104147463	3300025923	Switchgrass Rhizosphere	MLENNFTLKDRVRAFWQENPCGTKFADAPPGSRKFYELVEEHRYTKEWHIPDAAGFSQTK
Ga0207709_103728591	3300025935	Miscanthus Rhizosphere	MFEMSQHDSILKERVRAFWQQNPCGTKFADAPPGSRRFYELVEEHR
Ga0207670_106583342	3300025936	Switchgrass Rhizosphere	MSTNNATLKERVRAFWQENPCGTKFADAPPGSRRFYELVEAHRTGAS
Ga0207689_106914211	3300025942	Miscanthus Rhizosphere	MSENSSTLKERVRSFWQENPCGTKFADAPPGSRRFYELVE
Ga0207651_113336521	3300025960	Switchgrass Rhizosphere	MLKERVRVFWQENPCGTKFADAPPGSRRFYELVEEHRYRKEW
Ga0207640_114751431	3300025981	Corn Rhizosphere	VAGILPTFEMSQTNSILKDRVRAFWQENPCGTKFADAPPGSRRFYELVEEHRYKKEWHIP
Ga0207678_113466061	3300026067	Corn Rhizosphere	MFEMSQHDSILKERVRAFWQQNPCGTKFADAPPGSRRFYELVEEHRYKK
Ga0207708_106039412	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MFEMSQHDSILKERVRAFWQQNPCGTKFADAPPGSRRFYELVEEHRY
Ga0207641_120157061	3300026088	Switchgrass Rhizosphere	MLENNFTLKDRVRAFWQENPCGTKFADAPPGSRKFYELVEEHRYTKEWHIPTAAGFSQ
Ga0207648_117899071	3300026089	Miscanthus Rhizosphere	MLENNFTLKDRVRAFWQENPCGTKFADAPPGSRRFNELVEEHR
Ga0207676_109454952	3300026095	Switchgrass Rhizosphere	MSDNAELKERVRDFWQQHPCGTKFSDAEMGSREFF
Ga0207676_111463001	3300026095	Switchgrass Rhizosphere	MSEANAKLKERVRAFWQENPCGTKFADAPPGSRRFYELVETHRYTKEWHIPTAAG
Ga0207674_111262501	3300026116	Corn Rhizosphere	MLPCFEMLENNFTLKDRVRAFWQENPCGTKFADAPPGSRKFYELVEEHRYTKEWHIPAAAGFSQSKN
Ga0207675_1011245963	3300026118	Switchgrass Rhizosphere	MLENNFTLKDRVRAFWQENPCGTKFADAPPGSRKFYELVEEHRYSKEWHIPIAAGFSQ
Ga0207683_118836212	3300026121	Miscanthus Rhizosphere	MADPNDNLKERVRAFWQANPCGVKFADAAPGTRHFYELVEAHRYTKEWHIP
Ga0209378_12804691	3300026528	Soil	MSDLNSTLKSRVRAFWEANPCGVKFADVEPGSRLFYELIEAHRYTKEW
Ga0209485_10445821	3300027691	Agricultural Soil	MSEANSQLKERVRAFWQEHPCGTKFADAEPGSRKF
Ga0268265_115247802	3300028380	Switchgrass Rhizosphere	MSDANQNLKERVRAFWQANPCGVKFADAEPGSRRFYELVEAHHYAKEWHIPAAADFAGARGLKV
Ga0268264_127051351	3300028381	Switchgrass Rhizosphere	MSESNAQLKDRVRDFWQNHPCGSKFADARPGSRIFYEVIEQHRYEKEWHIPAAAGFDKTKNLRVLE
Ga0307504_100681223	3300028792	Soil	MSDANQNLKERVRAFWQANPCGVKFANAEPGTRRFYEL
Ga0307412_117528161	3300031911	Rhizosphere	MSENNSILKERVRAFWQQNPCGSKFADAPPGSRRFYELVE
Ga0307416_1017760412	3300032002	Rhizosphere	MLEENSKLKERVRAFWQEHPCGTKFADAEPGSRRFYELVEE
Ga0307411_120549961	3300032005	Rhizosphere	MSESNSKLKERVRAFWQENPCGTKFADAEMGSRRFYELV
Ga0307415_1015969471	3300032126	Rhizosphere	MLEENSKLKERVRAFWQEHPCGTKFADAEPGSRRFYELVEEHRYKKEWHIPAAA
Ga0310889_100775541	3300032179	Soil	MSESNAQLKDRVRDFWQNHPCGSKFADARPGSRIFYEVIEQHRYEKEWHIPAAA
Ga0364942_0043861_2_139	3300034165	Sediment	MADQDDNLKERVRAFWQANPCGVKFADAEPGTCRFYELVEAHRYTK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062116

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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