Metagenome / Metatranscriptome Family F062119

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062119
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	71 residues
Representative Sequence	PPWYGERLDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTVEYIRRYYDEHPAA
Number of Associated Samples	111
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.54 %
% of genes near scaffold ends (potentially truncated)	95.42 %
% of genes from short scaffolds (< 2000 bps)	86.26 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.885 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (23.664 % of family members)
Environment Ontology (ENVO)	Unclassified (35.115 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.466 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.61% β-sheet: 0.00% Coil/Unstructured: 48.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF11941	DUF3459	11.45
PF01243	Putative_PNPOx	4.58
PF07617	DUF1579	3.05
PF04149	DUF397	2.29
PF02583	Trns_repr_metal	2.29
PF07366	SnoaL	2.29
PF08734	GYD	1.53
PF02882	THF_DHG_CYH_C	1.53
PF16657	Malt_amylase_C	1.53
PF02012	BNR	0.76
PF01609	DDE_Tnp_1	0.76
PF07337	CagY_M	0.76
PF13560	HTH_31	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	2.29
COG0190	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	Coenzyme transport and metabolism [H]	1.53
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	1.53
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.53
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.76
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.76
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.76
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.76
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.76
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.89 %
Unclassified	root	N/A	35.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.89 %
Unclassified	root	N/A	35.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.89 %
Unclassified	root	N/A	35.11 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.31 %
Unclassified	root	N/A	35.11 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	52.67 %
Unclassified	root	N/A	35.11 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	48.85 %
Unclassified	root	N/A	35.11 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	38.17 %
Unclassified	root	N/A	35.11 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.29 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.53 %
Cryptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales	0.76 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.76 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	38.17 %
Unclassified	root	N/A	35.11 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.29 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.53 %
Cryptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae	0.76 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	38.17 %
Unclassified	root	N/A	35.11 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.29 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.53 %
Cryptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium	0.76 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	38.17 %
Unclassified	root	N/A	35.11 %
Streptomyces rubidus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces rubidus	1.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.53 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.76 %
Cryptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium	0.76 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.76 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	38.17 %
Unclassified	root	N/A	35.11 %
Streptomyces rubidus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces rubidus	1.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.53 %
Streptomyces sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp.	0.76 %
Cryptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium	0.76 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02FZ7Z7	Not Available	513	Open in IMG/M
2170459012\|GOYVCMS02IKEQY	Not Available	534	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101404488	Not Available	654	Open in IMG/M
3300000956\|JGI10216J12902_112388768	Not Available	842	Open in IMG/M
3300005093\|Ga0062594_101611118	Not Available	673	Open in IMG/M
3300005329\|Ga0070683_100861935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	869	Open in IMG/M
3300005332\|Ga0066388_107038351	All Organisms → cellular organisms → Bacteria → Terrabacteria group	566	Open in IMG/M
3300005336\|Ga0070680_100197843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1694	Open in IMG/M
3300005337\|Ga0070682_100120037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1763	Open in IMG/M
3300005354\|Ga0070675_100252364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1544	Open in IMG/M
3300005434\|Ga0070709_10933793	Not Available	687	Open in IMG/M
3300005436\|Ga0070713_100790164	Not Available	909	Open in IMG/M
3300005436\|Ga0070713_101218942	Not Available	728	Open in IMG/M
3300005437\|Ga0070710_10131120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1528	Open in IMG/M
3300005439\|Ga0070711_101113937	Not Available	680	Open in IMG/M
3300005439\|Ga0070711_101273228	Not Available	637	Open in IMG/M
3300005440\|Ga0070705_100174061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1451	Open in IMG/M
3300005444\|Ga0070694_100436180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1032	Open in IMG/M
3300005445\|Ga0070708_100333811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1428	Open in IMG/M
3300005467\|Ga0070706_100033407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4748	Open in IMG/M
3300005467\|Ga0070706_100834372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	853	Open in IMG/M
3300005468\|Ga0070707_100103907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium	2753	Open in IMG/M
3300005530\|Ga0070679_101083963	Not Available	746	Open in IMG/M
3300005535\|Ga0070684_100020255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5517	Open in IMG/M
3300005536\|Ga0070697_100007525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8476	Open in IMG/M
3300005536\|Ga0070697_101513949	Not Available	600	Open in IMG/M
3300005539\|Ga0068853_100514075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1131	Open in IMG/M
3300005546\|Ga0070696_101789859	Not Available	531	Open in IMG/M
3300005548\|Ga0070665_100076476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3354	Open in IMG/M
3300005554\|Ga0066661_10634486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	631	Open in IMG/M
3300005577\|Ga0068857_100417406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1251	Open in IMG/M
3300005614\|Ga0068856_101847467	Not Available	615	Open in IMG/M
3300005615\|Ga0070702_100261829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1178	Open in IMG/M
3300005617\|Ga0068859_101538018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	734	Open in IMG/M
3300005841\|Ga0068863_101135348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	786	Open in IMG/M
3300006028\|Ga0070717_10470345	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300006173\|Ga0070716_100021112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3427	Open in IMG/M
3300006175\|Ga0070712_100350297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1208	Open in IMG/M
3300006175\|Ga0070712_100659638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	889	Open in IMG/M
3300006237\|Ga0097621_100754918	Not Available	899	Open in IMG/M
3300006358\|Ga0068871_100572719	Not Available	1024	Open in IMG/M
3300006576\|Ga0074047_11998552	Not Available	669	Open in IMG/M
3300006579\|Ga0074054_12169970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	931	Open in IMG/M
3300006755\|Ga0079222_10465830	All Organisms → cellular organisms → Bacteria → Terrabacteria group	910	Open in IMG/M
3300006804\|Ga0079221_10865055	Not Available	658	Open in IMG/M
3300006804\|Ga0079221_11576441	Not Available	530	Open in IMG/M
3300006854\|Ga0075425_100348231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1705	Open in IMG/M
3300006871\|Ga0075434_100181367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2125	Open in IMG/M
3300006871\|Ga0075434_100887489	Not Available	907	Open in IMG/M
3300006914\|Ga0075436_100977991	Not Available	635	Open in IMG/M
3300006914\|Ga0075436_101320685	Not Available	546	Open in IMG/M
3300006953\|Ga0074063_14069902	Not Available	629	Open in IMG/M
3300007258\|Ga0099793_10511768	All Organisms → cellular organisms → Bacteria → Terrabacteria group	597	Open in IMG/M
3300009148\|Ga0105243_10448429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1210	Open in IMG/M
3300009162\|Ga0075423_12633329	Not Available	550	Open in IMG/M
3300009177\|Ga0105248_10429047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1489	Open in IMG/M
3300009545\|Ga0105237_12725263	Not Available	505	Open in IMG/M
3300009551\|Ga0105238_11125167	Not Available	808	Open in IMG/M
3300009551\|Ga0105238_11229834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp.	774	Open in IMG/M
3300009553\|Ga0105249_13414423	Not Available	511	Open in IMG/M
3300010043\|Ga0126380_10058129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2128	Open in IMG/M
3300010046\|Ga0126384_10518470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1030	Open in IMG/M
3300010360\|Ga0126372_12460309	All Organisms → cellular organisms → Bacteria → Terrabacteria group	571	Open in IMG/M
3300010371\|Ga0134125_10472787	Not Available	1389	Open in IMG/M
3300010371\|Ga0134125_10707586	Not Available	1110	Open in IMG/M
3300010373\|Ga0134128_10180762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2379	Open in IMG/M
3300010396\|Ga0134126_10700351	Not Available	1151	Open in IMG/M
3300010400\|Ga0134122_11234100	Not Available	751	Open in IMG/M
3300010401\|Ga0134121_10203481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1713	Open in IMG/M
3300012189\|Ga0137388_12017781	Not Available	505	Open in IMG/M
3300012206\|Ga0137380_11375730	Not Available	591	Open in IMG/M
3300012211\|Ga0137377_10769257	All Organisms → cellular organisms → Bacteria → Terrabacteria group	896	Open in IMG/M
3300012351\|Ga0137386_10103944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2011	Open in IMG/M
3300012357\|Ga0137384_10102613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2388	Open in IMG/M
3300012359\|Ga0137385_10114932	All Organisms → cellular organisms → Bacteria	2379	Open in IMG/M
3300012944\|Ga0137410_12010223	Not Available	514	Open in IMG/M
3300012985\|Ga0164308_10447826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1068	Open in IMG/M
3300012986\|Ga0164304_11328252	Not Available	587	Open in IMG/M
3300012987\|Ga0164307_10170288	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300013297\|Ga0157378_10354762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1434	Open in IMG/M
3300013297\|Ga0157378_11208620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	795	Open in IMG/M
3300013307\|Ga0157372_10405600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1588	Open in IMG/M
3300015371\|Ga0132258_10542374	Not Available	2914	Open in IMG/M
3300015371\|Ga0132258_11907094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1496	Open in IMG/M
3300015372\|Ga0132256_100067239	All Organisms → cellular organisms → Bacteria	3385	Open in IMG/M
3300015372\|Ga0132256_100356477	Not Available	1558	Open in IMG/M
3300015372\|Ga0132256_102180574	Not Available	659	Open in IMG/M
3300017974\|Ga0187777_11457199	All Organisms → cellular organisms → Bacteria → Terrabacteria group	506	Open in IMG/M
3300020082\|Ga0206353_10146174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	746	Open in IMG/M
3300021088\|Ga0210404_10164835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces rubidus	1170	Open in IMG/M
3300021088\|Ga0210404_10357887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	811	Open in IMG/M
3300021403\|Ga0210397_10146375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1647	Open in IMG/M
3300021405\|Ga0210387_11712111	Not Available	532	Open in IMG/M
3300021559\|Ga0210409_10611394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	959	Open in IMG/M
3300021560\|Ga0126371_10524024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1334	Open in IMG/M
3300025898\|Ga0207692_10096192	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300025904\|Ga0207647_10086229	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300025906\|Ga0207699_10220483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1294	Open in IMG/M
3300025906\|Ga0207699_10849886	All Organisms → cellular organisms → Bacteria → Terrabacteria group	672	Open in IMG/M
3300025907\|Ga0207645_10366374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	966	Open in IMG/M
3300025910\|Ga0207684_10441349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1118	Open in IMG/M
3300025911\|Ga0207654_10153183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1482	Open in IMG/M
3300025912\|Ga0207707_10245843	Not Available	1554	Open in IMG/M
3300025913\|Ga0207695_11134557	Not Available	662	Open in IMG/M
3300025915\|Ga0207693_10403959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces rubidus	1068	Open in IMG/M
3300025915\|Ga0207693_10493018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	957	Open in IMG/M
3300025915\|Ga0207693_11167913	All Organisms → cellular organisms → Bacteria → Terrabacteria group	582	Open in IMG/M
3300025916\|Ga0207663_10989371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	674	Open in IMG/M
3300025918\|Ga0207662_10268079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1126	Open in IMG/M
3300025928\|Ga0207700_10689950	Not Available	911	Open in IMG/M
3300025928\|Ga0207700_11464464	Not Available	606	Open in IMG/M
3300025929\|Ga0207664_10329536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1348	Open in IMG/M
3300025929\|Ga0207664_10498566	Not Available	1090	Open in IMG/M
3300025939\|Ga0207665_10361630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1097	Open in IMG/M
3300025941\|Ga0207711_10177377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1936	Open in IMG/M
3300025944\|Ga0207661_10737900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	906	Open in IMG/M
3300026035\|Ga0207703_10455599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1195	Open in IMG/M
3300026067\|Ga0207678_10012736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7385	Open in IMG/M
3300026088\|Ga0207641_10245484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1670	Open in IMG/M
3300026489\|Ga0257160_1037445	All Organisms → cellular organisms → Bacteria → Terrabacteria group	816	Open in IMG/M
3300026557\|Ga0179587_10865820	All Organisms → cellular organisms → Bacteria → Terrabacteria group	596	Open in IMG/M
3300028379\|Ga0268266_10264749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1594	Open in IMG/M
3300028536\|Ga0137415_10327012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1337	Open in IMG/M
3300028768\|Ga0307280_10032030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1575	Open in IMG/M
3300031740\|Ga0307468_102507557	Not Available	505	Open in IMG/M
3300032174\|Ga0307470_10172699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1349	Open in IMG/M
3300032205\|Ga0307472_100402722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1145	Open in IMG/M
3300032770\|Ga0335085_10562062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1291	Open in IMG/M
3300032829\|Ga0335070_10043874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4969	Open in IMG/M
3300032893\|Ga0335069_10036751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6574	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.23%
Host-Associated	Host-Associated	29.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.23%
Plants	Host-Associated → Plants	29.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.63%
Roots	Host-Associated → Plants → Roots	1.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.11%
Loam	Environmental → Terrestrial → Soil → Loam	32.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.53%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.53%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	31.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.05%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.53%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	23.66%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.63%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.34%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.58%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.58%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.29%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.29%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.53%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_00480160	2170459010	Grass Soil	PGPDGPVDQAHGADITPDTIIPPWYGERLDLNHAIWACFANARTNEEKQADWEQAQEPVSRPDTWGGDFNDTVDYIRRYYDENPVG
N56_01942570	2170459012	Grass Soil	AIYVCFANARTEEQKQADREQAQEPVFRPDTVVGDFSATVDYIRRYYDENPAA
INPhiseqgaiiFebDRAFT_1014044881	3300000364	Soil	PWYGERLDLNHAIWDCFANARTDEQKQADWKQAQEPVSRPDTWGGDFNDTVDYIRRYYDENPVA*
JGI10216J12902_1123887682	3300000956	Soil	WACFANARTDEEKQADWEQAQEPVRRPDTRGGDFSDTADYIRRYYDEHPAA*
Ga0062594_1016111182	3300005093	Soil	HHAIWACFANARTNEEKQADQEQDQEAVFRPKSSGGDFSTTVEYIRRYYDEHPAA*
Ga0070683_1008619352	3300005329	Corn Rhizosphere	AIWACFANARTNEEKQADQEQDQEAVFRPKSSGGDFSTTVEYIRRYYDEHPAA*
Ga0066388_1070383511	3300005332	Tropical Forest Soil	TIIPPWYGERLDLDHAIYVCFANARTDEQKRADREQAQEPVFRPRKWVIDLNDTVNYFRRYCAEHPAA*
Ga0070680_1001978431	3300005336	Corn Rhizosphere	YGERLDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTVEYIRRYYDEHPAA*
Ga0070682_1001200373	3300005337	Corn Rhizosphere	LDLHHAIWACFANARTNEEKQADGDQERAQEEAVFRPKSWGGDFSTTVEYIRRYYEEHPAA*
Ga0070675_1002523641	3300005354	Miscanthus Rhizosphere	LDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTVEYIRRYYDEHPAA*
Ga0070709_109337931	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	TPDTIVPPWYGERLDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTAEYIRRYYDEHPAA*
Ga0070713_1007901642	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GTHDADITPDTIIPPWYGERLDLNHAIWACFANARTNEEKQADQEQAQEALFRPKSWGGDFSTTVDYIRRYYEEHPAA*
Ga0070713_1012189421	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	DGTPLPASPPLPGPEGPIDQAHDAAITPDTIIPPWYGERLDLNHAIWACFANARTDEQKQADWEQAQEPAFRPDTRGGDFSDTADYIRRYYEEHPAA*
Ga0070710_101311201	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	YGERLDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTAEYIRRYYDEHPAA*
Ga0070711_1011139372	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	DTIIPPWYGERLDLHHAIWACFANARTNEEKQADQEQDQESVFRPKSWGGDFSTTVEYIRRYYDEHPAA*
Ga0070711_1012732282	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ITPDTIIPPWYGERLDLNHAIWACFANARTDEQKQADWEQAQEPAFRPDTRGGDFSDTADYIRRYYEEHPAA*
Ga0070705_1001740611	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	PDTIVPPWYGERLDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTVEYIRRYYDEHPAA*
Ga0070694_1004361802	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	SPPLPGPDGPIDQTHDADITPDTIVPPWYGERLDLNHAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTAEYIRRYYDEHPAA*
Ga0070708_1003338113	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	PWYGERLDLDHAIYTCFANARTDEEKQADREQAQEPVFRSDTWDGDFSATVDYIRRYYDEHPVA*
Ga0070706_1000334071	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SPPLPEPDGRIGETHDADITPDTIIPPWYGERLDLDHAIYTCFANARTDEEKQADREQAQEPVFRSDTWDGDFSATVDYIRRYYDEHPVA*
Ga0070706_1008343722	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	DITPDTIIPPWYGERLDLNHAIWACFANARTDEEKRADWEQAQEPVFRPDTRGGDFSDTADYIRRYYDEHPAA*
Ga0070707_1001039075	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	IIPPWYGERLDLDHAIYTCFANARTDEEKQADREQAQEPVFRSDTWDGDFSATVDYIRRYYDEHPVA*
Ga0070679_1010839631	3300005530	Corn Rhizosphere	DTIIPPWYGERLDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTAEYIRRYYDEHPAA*
Ga0070684_1000202551	3300005535	Corn Rhizosphere	LDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSSGGDFSTTVEYIRRYYDEHPAA*
Ga0070697_1000075251	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	WYGERLDLDHAIYTCFANARTDEEKQADREQAQEPVFRSDTWDGDFSATVDYIRRYYDEHPVA*
Ga0070697_1015139492	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	FANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTAEYIRRYYDEHPAA*
Ga0068853_1005140751	3300005539	Corn Rhizosphere	IVPPWYGERLDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTAEYIRRYYDEHPAA*
Ga0070696_1017898591	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	DITPDTIVPPWYGERLDLHHAIWACFANARTNEEKQADQEQDQESVFRPKSWGGDFSTTVEYIRRYYDEHPAA*
Ga0070665_1000764761	3300005548	Switchgrass Rhizosphere	WACFANARTNEEKRADQERAHEEAVFRPKSWGGDFSTTVEYIRRYYEEHPAA*
Ga0066661_106344861	3300005554	Soil	LPEPAGGIGDTHDADITEDTIIPAWYGERLDLDYAIAVCFANARTDEEKQADQEQAQEAVFRPKSWGGDFSTTVDYIRRYYEEHPAA*
Ga0068857_1004174062	3300005577	Corn Rhizosphere	PWYGERLDLHHAIWACFANARTNEEKRADQERAQEEAVFRPKSWGGDFSTTVEYIRRYYEEHPSA*
Ga0068856_1018474673	3300005614	Corn Rhizosphere	VPPWYGERLDLHHAIWACFANARTNEEKQADQEQVQEEAVFRPKSWGGDFSTTVEYVRRYYEEHPAA*
Ga0070702_1002618292	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	DLHHAIWTCFANARTNEEKRADQERAQEEAVFRPKSWGGDFSTTVEYIRRYYEEHPSA*
Ga0068859_1015380181	3300005617	Switchgrass Rhizosphere	PPWYGERLDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTAEYIRRYYDEHPAA*
Ga0068863_1011353481	3300005841	Switchgrass Rhizosphere	DTIIPPWYGERLDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSSGGDFSTTVEYIRRYYDEHPAA*
Ga0070717_104703452	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VVHDRGYLIAASPPDSGGGFGFYRPDGTLLPSSPPLPEPDGGIGAAHDADITPDTIIPPWYGERLDLDHAIYTCFANARTDEEKQADREQAQEPVFRSDTWDGDFSATVDYIGRYYDEHPVA*
Ga0070716_1000211125	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DLDYAIAVCFANARTDEEKRADQEQAQEDVFRPKSWGGGDFSTTVEYIRRYYDEHPAA*
Ga0070712_1003502971	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LDLDYAIAVCFANARTDEEKRADQEQAQEDVFRPKSWGGGDFSTTVEYIRRYYDEHPAA*
Ga0070712_1006596383	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DTIVPAWYGERLDLDYAIAVCFANARTEEEKRADREQAQETVFRPKSWGGDFSTTVDYIRRYYEEHPAA*
Ga0097621_1007549183	3300006237	Miscanthus Rhizosphere	DLHHAIWACFANARTNEEKQADQEQVQEEAVFRPKSWGGDFSTTVEYVRRYYEEHPAA*
Ga0068871_1005727191	3300006358	Miscanthus Rhizosphere	PPWYGERLDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTVEYIRRYYDEHPAA*
Ga0074047_119985522	3300006576	Soil	GGPIGQAHDADITPDTIIPPWYGERLDLDHAIWACFANARTDEEKQADWEQAQEPVFRPDTRGGDFSDTADYIRRYYDEHPAA*
Ga0074054_121699701	3300006579	Soil	DITPDTIIPPWYGERLDLNHAIWACFANARTDEEKQADWEQAQEPVLRPDTRGGDFSDTADYIRRYYDEHPAA*
Ga0079222_104658302	3300006755	Agricultural Soil	DITPDTIIPPWYGERLDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSSGGDFSTTVEYIRRYYDEHPAA*
Ga0079221_108650551	3300006804	Agricultural Soil	ITPDTIIPPWYGERLDLNHAIWACFANARTDEEKRADQEQDQESVFRPKSWGGDFSTTVEYIRRYYDEHPAG*
Ga0079221_115764412	3300006804	Agricultural Soil	DADITPDTIIPPWYGERLDLNHAIWTCFANARTDEQKQADWEQAQEPVFRPDTRGGDFSDTADYIRRYYDEHPAA*
Ga0075425_1003482311	3300006854	Populus Rhizosphere	PPWYGERLDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSSGGDFSTTVEYIRRYYDEHPAA*
Ga0075434_1001813674	3300006871	Populus Rhizosphere	ITPDTIIPPWYGERLDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSSGGDFSTTVEYIRRYYDEHPAA*
Ga0075434_1008874891	3300006871	Populus Rhizosphere	AHDADITPDTIIPPWYGERLDLDYAIAVCFANARTDEEKRADQEQAQEAVFRPKSWGGDFSTTVDYIRRYYEEHPAA*
Ga0075436_1009779912	3300006914	Populus Rhizosphere	PPWYGERLDLHHAIWACFANARTDEEKHADQEEAQEEAVFRPNSLGGDFNTTVEYIRRYYDEHPAA*
Ga0075436_1013206851	3300006914	Populus Rhizosphere	LDLDYAIAVCFANARADEEKRADQEQAQEALYRPKSWGSDFSTTVDYIRRYYEEHPAA*
Ga0074063_140699022	3300006953	Soil	HKIVHDRGYLIAAPPGGGTFAFYRPDGTPLPSCPPLPEPDGPIDQAHDAAITPDTIIPPWYGERLDLDHAIWACFANARTDEEKQADWEQAQEPVFRPDTRGGDFSDTADYIRRYYDEHPAA*
Ga0099793_105117681	3300007258	Vadose Zone Soil	TAHDADITEDTIVPAWYGERLDLDYAIAVCFANARTDEEKRADQEQAQEAVFRPKSWGGDFSTTVDYIRRYYEEHPAA*
Ga0105243_104484294	3300009148	Miscanthus Rhizosphere	PDTIIPPWYGERLDLNHAIWACFANARTDEEKRADQEQAQEALFRPKSWGGDFSTTVDYIRRYYEEHPAA*
Ga0075423_126333292	3300009162	Populus Rhizosphere	TPETIVPPWYGERLDLDYAIYVCFANARTDEEKHADQEEAQEEAVFRPNSLGGDFNTTVEYIRRYYDEHPAA*
Ga0105248_104290471	3300009177	Switchgrass Rhizosphere	HAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTAEYIRRYYDEHPAA*
Ga0105237_127252631	3300009545	Corn Rhizosphere	PWYGERLDLHHAIWACFANARTNEEKQADQEQDQEAVFLPKSWGGDFSTTVEYIRRYYDEHPAA*
Ga0105238_111251671	3300009551	Corn Rhizosphere	DTIVPPWYGERLDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTAEYIRRYYDEHPAA*
Ga0105238_112298341	3300009551	Corn Rhizosphere	PIGAAHDADITPDTIIPPWYGERLDLNHAIWACFANARTDEEKRADQEQAQEALFRPKSWGGDFSTTVDYIRRYYEEHPAA*
Ga0105249_134144232	3300009553	Switchgrass Rhizosphere	ALPEPDGSISEAHDTDITEDTIVPAWYGERLDLDYAIAVCFANARTDEEKRADQEQAQEALFRPKSWGGDFSTTVDYIRRYYEEHPAA*
Ga0126380_100581293	3300010043	Tropical Forest Soil	PEPRHLGLLRQARTDEEKRADQEQAQEAGFRPKSWDGDFSTTVEYIRRYYDEHPAA*
Ga0126384_105184701	3300010046	Tropical Forest Soil	ITPDTIIPPWYGERLDLNHAIWACFANARTDEEKRADQEQAQEAVFRPKSWGGDFSTTVEYIRRYYDEHPAA*
Ga0126372_124603092	3300010360	Tropical Forest Soil	DGPIDAAHDAEITPETIIPPWYGERLDLDHAIYVCFANARTDEQKRADREQAQEPVFRPRKWVIDLNDTVNYFRRYCAEHPAA*
Ga0134125_104727872	3300010371	Terrestrial Soil	ERLDLHHAIWACFANARTNEEKQADQEQDQESVFRPKSWGGDFSTTVEYIRRYYDEHPAA
Ga0134125_107075861	3300010371	Terrestrial Soil	VTRRIRPGATRLDLHHAIWTCFANARTDEEKRADQEQAQEAVFRRKSWGGDFSTTVEYIRRYYDEHPAA*
Ga0134128_101807621	3300010373	Terrestrial Soil	EDTIVPSWYGERLDLDYAIAVCFANARTEEEKRADQVQAQEDVFRPKSWGGGDFSTTVEYIRRYYDEHPAA*
Ga0134126_107003512	3300010396	Terrestrial Soil	PEPDGIIDAAHDADITPDTIIPPWYGERLDLDHAIYVCFANARTDEEKLADQEQAQEAVFRPKSGGGDFSTTVGYIRRYYLT*
Ga0134122_112341002	3300010400	Terrestrial Soil	VPPWYGERLDLHHAIWACFANARTNEEKQADQEQDQESVFRPKSWGGDFSTTVEYIRRYYDEHPAA*
Ga0134121_102034811	3300010401	Terrestrial Soil	IWACFANARTNEEKQADQEQDQESVCRPKSGGGDFSTTVEYIRRYYDEHPAA*
Ga0137388_120177811	3300012189	Vadose Zone Soil	LDYAIAVCFANARTDEEKRADQEQAQEAVFRPKSWGGDVSTTVDYIRRYYEEHPAA*
Ga0137380_113757301	3300012206	Vadose Zone Soil	HDADITPDTIIPPWYGERLDLNHAIWACFANARTDEQKQADWEQAQEPVFRPDTRGGDFSDTADYVRRYYDEHPAA*
Ga0137377_107692573	3300012211	Vadose Zone Soil	PACPALPEPGGSIDAAHDADLTPETLIPPWYGERLDLDHAIYVCFANARTDEQKQADREQAQETVFRPNTWGGDFSATVDYIRRYYDEHPAA*
Ga0137386_101039441	3300012351	Vadose Zone Soil	TIIPPWYGERLDLNHAIWACFANARTDEQKQADWEQAQEPVFRPDTRGGDFSDTADYVRRYYDEHPAA*
Ga0137384_101026131	3300012357	Vadose Zone Soil	GAPLPSSPPLPEPGGSIDAAHDADITPDTIIPPWYGERLDLNHAIWACFANARTDEQKQADWEQAQEPVFRPDTRGGDFSDTADYVRRYYDEHPAA*
Ga0137385_101149321	3300012359	Vadose Zone Soil	LPEPGGSIDAAHDADITPDTIIPPWYGERLDLNHAIWACFANARTDEQKQADWEQAQEPVFRPDTRGGDFSDTADYVRRYYDEHPAA*
Ga0137410_120102232	3300012944	Vadose Zone Soil	AHDADITPDTIVPAWYGERLDLDYAIAVCFANARIDEEKRADQEQAQEAVFRPKSRGGDFSTTVEYIRRYYEEHPAA*
Ga0164308_104478262	3300012985	Soil	WYGERLDLHHAIWACFANARTDEEKQADQEQAQEEAVFRPKSWGGDFSTTVEYIRRYYEEHPAA*
Ga0164304_113282521	3300012986	Soil	IVPAWYGERLDLDYAIAVCFANARTDEEKRADQEQAQEALFRPKSWGGDFSTTVDYIRRYYEEHPAA*
Ga0164307_101702882	3300012987	Soil	AHDADITPDTIIPPWYGERLDLNHAIWACFANARTDEEKQADWEQAQEPVFQPDTRGGDFSDTADYIRRYYEEHPAA*
Ga0157378_103547623	3300013297	Miscanthus Rhizosphere	CFANARTDEEKRADQEQAQEEAVFRPKSWGGDFSTTVEYIRRYYEEHPAA*
Ga0157378_112086201	3300013297	Miscanthus Rhizosphere	PWYGERLDLNHAIWACFANARTNEEKQADQEQDQETVFRPKSSGGDFSTTVEYIRRYYDEHPAA*
Ga0157372_104056001	3300013307	Corn Rhizosphere	PEPEGSIGETHDADITPDTIIPPWYGERLDLDHAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTVEYIRRYYDEHPAA*
Ga0132258_105423741	3300015371	Arabidopsis Rhizosphere	PDTIIPPWYGERLDLDHAIYVCFANARTDEEKRADQEQAQEALFRPKSWGGDFSTTVDYIRRYYEEHPAA*
Ga0132258_119070941	3300015371	Arabidopsis Rhizosphere	PDGTPLPASPPLPAPQGSISQTHDADITPDTIIPPWYGERLDLNHAIWACFANARTDEEKQADWEQAQEPVLRPDTRGGDFSDTAEYIRRYYDEHPPA*
Ga0132256_1000672391	3300015372	Arabidopsis Rhizosphere	PPWYGERLDLHHAIWACFANARTNEEKRADQEQAQEALFRPKSWGGDFSTTVDYIRRYYEEHPAA*
Ga0132256_1003564773	3300015372	Arabidopsis Rhizosphere	YGERLDLHHAIWACFANASTNEEKRADQEQDQESVFRPKSWGGDFSTTVEYIRRYYDEHPAA*
Ga0132256_1021805741	3300015372	Arabidopsis Rhizosphere	DGTPLPASPPLPEPDGPIGQAHDADITPDTIIPPWYGEPLDLNPAIWACFANARTDEEKQADWEQAQEPVLRPDTRGGDFSDTAEYIRRYYDEHPPA*
Ga0187777_114571992	3300017974	Tropical Peatland	GGPISQAHDADITPDTIIPPWHGERLDLDHAIWACFANARTEEQKRADREQAQKPVFRPRKWVSDLNDMVNYFRRYYAEHPAA
Ga0206353_101461742	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	VPPWYGERLDLHHAIWACFANARTNEEKQADQEQDQEAVFLPKSWGGDFSTSVEYIRRYYDEHPAA
Ga0210404_101648351	3300021088	Soil	IAVCFANARTEEEKRADREQAQEAVFRPKSWGGDFSTTVDYIRRYYEEHPAA
Ga0210404_103578871	3300021088	Soil	WHGERLDLDHAIYVCFANARTHEEKRADQEQAQEAVFRPKSWGGDFSTTVEYIRRYYDEHPAA
Ga0210397_101463751	3300021403	Soil	EAPAAETLRPASPALPEPEGGIDAAHDAEITGDTIIPPWHGERLDLDHAIYVCFANARTHEEKRADQEQAQEAVFRPKSWGGDFSTTVEYIRRYYDEHPVA
Ga0210387_117121112	3300021405	Soil	CGERLDLDYAIAVCFANGRTEQEKRADREQAQEDVFRPKSWGDGDFSTTVEYIRRYYDEHPAARQSFALRLPRHFPG
Ga0210409_106113943	3300021559	Soil	SDLADGLVAVAKARTDEEKEADQEQAQEAVFRPKSWGGDFSATVDYIRRHYEEHPAA
Ga0126371_105240241	3300021560	Tropical Forest Soil	AAAPPGGGGFAFYRPDGTPLPSSPSLPEPDGPIDAAHDAEITPETIIPPWYGERLDLDHAIYVCVANARTDEQKRADREQAQEPVFRPRKWVIDLNDTVNYFRRYCAEHPAA
Ga0207692_100961921	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AHDAAITPDTIIPPWYGERLDLNHAIWACFANARTDEQKQADWEQAQEPAFRPDTRGGDFSDTADYIRRYYEEHPAA
Ga0207647_100862291	3300025904	Corn Rhizosphere	HAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTVEYIRRYYDEHPAA
Ga0207699_102204831	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	ERLDLHHAIWACFANARTNEEKQADGDQERAQEEAVFRPKSWGGDFSTTVEYIRRYYEEHPSA
Ga0207699_108498863	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	PIGAAHDADITPDTIIPPWYGERLDLNHAIWACFANARTDEEKRADQEQAQEALFRPKSWGGDFSTTVDYIRRYYEEHPAA
Ga0207645_103663741	3300025907	Miscanthus Rhizosphere	ETHDADITPDTIIPPWYGERLDLDHAIWACFANARTNEEKQADQEQDPEAVFRPKSWGGDFSTTVEYIRRYYDEHPAA
Ga0207684_104413492	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	YRPDGAPLPSSPPLPEPGGPIDQAHDADITPDTIIPPWYGERLDLNHAIWACFANARTDEEKRADWEQAQEPVFRPDTRGGDFSDTADYIRRYYDEHPAA
Ga0207654_101531831	3300025911	Corn Rhizosphere	AIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTVEYIRRYYDEHPAA
Ga0207707_102458431	3300025912	Corn Rhizosphere	IWACFANARTNEEKQADQEQDQEAVFRPKSSGGDFSTTVEYIRRYYDEHPAA
Ga0207695_111345571	3300025913	Corn Rhizosphere	EGSIGETHDADITPDTIIPPWYGERLDLDHAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTVEYIRRYYDEHPAA
Ga0207693_104039591	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LPGPGGSISTAHDAEVTPDTIVPAWYGERLDLDYAIAVCFANARTEEEKRADREQAQETVFRPKSWGGDFSTTVDYIRRYYEEHPAA
Ga0207693_104930181	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	AIAVCFANARTDEEKRADQEQAQEDVFRPKSWGGGDFSTTVEYIRRYYDEHPAA
Ga0207693_111679132	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	AHDAAITPDTIIPPWYGERLDLNHAIWACFANARTDEQKQADWEQAQEPAFRPDTRGGNFSDTADYIRRYYEEHPAA
Ga0207663_109893712	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VCFANARTDEEKRADQEQAQEAVFRPKSWGDDFSTTVEYVRRYYEEHPAA
Ga0207662_102680791	3300025918	Switchgrass Rhizosphere	HHAIWTCFANARTNEEKRADQERAQEEAVFRPKSWGGDFSTTVEYIRRYYEEHPAA
Ga0207700_106899501	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TGTHDADITPDTIIPPWYGERLDLNHAIWACFANARTNEEKQADQEQAQEALFRPKSWGGDFSTTVDYIRRYYEEHPAA
Ga0207700_114644642	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	ERLDLDYAIAVCFANARTDEEKRADQEQAQEAVFRPKSWGGDFSTTIEYVRRYYEEHPAA
Ga0207664_103295361	3300025929	Agricultural Soil	ACPALPEPDGSIDSAHDADITEDTIVPAWYGERLDLDYAIAVCFANARTDEEKRADQEQAQEDVFRPKSWGGGDFSTTVEYIRRYYDEHPAA
Ga0207664_104985663	3300025929	Agricultural Soil	RLDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSSGGDFSTTVEYIRRYYDEHPAA
Ga0207665_103616302	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	DVTEDTIVPPWYGERLDLDYAIAVCFANARTDEEKRADQEQAQEDVFRPKSWGGGDFSTTVEYIRRYYDEHPAA
Ga0207711_101773773	3300025941	Switchgrass Rhizosphere	LDLHHAIWTCFANARTNEEKRADQERAQEEAVFRPKSWGGDFSTTVEYIRRYYEEHPSA
Ga0207661_107379001	3300025944	Corn Rhizosphere	AIWACFANARTNEEKQADQEQDQEAVFRPKSSGGDFSTTVEYIRRYYDEHPAA
Ga0207679_102474641	3300025945	Corn Rhizosphere	ACFANARTNEEKQADGDQERAQEEAVFRPKSWGGDFSTTVEYIRRYYEEHPSA
Ga0207703_104555991	3300026035	Switchgrass Rhizosphere	YAIAVCFANARTDEEKRADQEQAQEAVFRPKSWGGGDFSTTVEYIRRYYDEHPAA
Ga0207678_1001273610	3300026067	Corn Rhizosphere	ERLDLHHAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTAEYIRRYYDEHPAA
Ga0207641_102454841	3300026088	Switchgrass Rhizosphere	DLHHAIWTCFANARTNEEKRADQERAQEEAVFRPKSWGGDFSTTVEYIRRYYEEHPSA
Ga0257160_10374451	3300026489	Soil	PDTIIPPWYGERLDLDHAIWVCFANARTDEQKRADREQAQETVVRSDIWGGDFSTTADYIRRYYDEHPAA
Ga0179587_108658202	3300026557	Vadose Zone Soil	LDLDHAIYVCFANARTGEQKRADREQAQEAEVRPNIWGGDFSTTVDYIHRYYDEHPAA
Ga0268266_102647491	3300028379	Switchgrass Rhizosphere	PDGSPLPACPALPEPEGSIGETHDADITPDTIIPPWYGERLDLDHAIWACFANARTNEEKQADQEQDQEAVFRPKSWGGDFSTTVEYIRRYYDEHPAA
Ga0137415_103270123	3300028536	Vadose Zone Soil	PMPSSPELPGSDGDLAGCHDAQITTDTIIPAGLGDKLDLDLAIWACFANARTDEEKQADWEQAQEPVFRPDTRGGDFSDTADYIRRYYDEHPAA
Ga0307280_100320302	3300028768	Soil	SPPLPEPESPIDQTHDADITPDTIIPPWYGERLDLNHAIWAYFANARTDEEKQADWEQAQESVLQPDTRGGDFSDTADYIRHYYDEHPAA
Ga0307468_1025075572	3300031740	Hardwood Forest Soil	SVCFANARTDEEKRADQEQAQEDVFRPKSWGGGDFSTTVEYIRRYYDEHPAA
Ga0307470_101726992	3300032174	Hardwood Forest Soil	PPGTFAFYRPDGTPLPACPALPEPDGSIDSAHDADITEDTIVPAWYGERLDLDYAIAVCFANARTDEEKRADQEQAQEDVFRPKSWGGGDFSTTVEYIRRYYDEHPAA
Ga0307472_1004027222	3300032205	Hardwood Forest Soil	DTIVPPWYGERLDLDYAIAVCFANARTDEEKRADQEQAQEAVFRPKSWGGDFSTTVEYIRRYYEEHPSA
Ga0335085_105620622	3300032770	Soil	AAHDADITPDTIVPPWYGERLDLDHAIWACFANARTNEEKRADQEEAVFRPKSWGGDFSTTVEYIRRYYEEHPAA
Ga0335070_100438744	3300032829	Soil	VLPASPALPLPEGGIAGVHDAQITPETIIPPWYGERLDLDHAIWVCFANARTEEQKRADREQAQEPVFRPRIWVSDLNDTVNYFRRYYAEHPTA
Ga0335069_100367512	3300032893	Soil	VLPASPALPPPEGGIAGVHDAQITPETIIPPWYGERLDLDHAIWVCFANARTEEQKRADREQAQEPVFRPRIWVSDLNDTVNYFRRYYAEHPTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062119

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences