Metagenome Family F062196

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062196
Family Type	Metagenome
Number of Sequences	131
Average Sequence Length	58 residues
Representative Sequence	VKLDPEERIIATALDQAELDDANERGAGARIEFKPEGHAKVTITISRELVEQARAL
Number of Associated Samples	83
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	95.87 %
% of genes near scaffold ends (potentially truncated)	83.97 %
% of genes from short scaffolds (< 2000 bps)	83.21 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (75.573 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.985 % of family members)
Environment Ontology (ENVO)	Unclassified (54.962 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.649 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.71% β-sheet: 16.67% Coil/Unstructured: 47.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF08734	GYD	3.05
PF02566	OsmC	1.53
PF14534	DUF4440	1.53
PF02738	MoCoBD_1	1.53
PF13561	adh_short_C2	0.76
PF08281	Sigma70_r4_2	0.76
PF02525	Flavodoxin_2	0.76
PF13610	DDE_Tnp_IS240	0.76
PF05443	ROS_MUCR	0.76
PF10262	Rdx	0.76
PF13701	DDE_Tnp_1_4	0.76
PF08818	DUF1801	0.76
PF07045	DUF1330	0.76
PF12727	PBP_like	0.76
PF00872	Transposase_mut	0.76
PF02272	DHHA1	0.76
PF00248	Aldo_ket_red	0.76
PF01336	tRNA_anti-codon	0.76
PF13358	DDE_3	0.76
PF00753	Lactamase_B	0.76
PF03972	MmgE_PrpD	0.76
PF12973	Cupin_7	0.76
PF13506	Glyco_transf_21	0.76
PF00924	MS_channel	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	3.05
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.53
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.53
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.76
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.76
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.76
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.76
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.76
COG4957	Predicted transcriptional regulator	Transcription [K]	0.76
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.76
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.57 %
All Organisms	root	All Organisms	24.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.57 %
cellular organisms	root	All Organisms → cellular organisms	24.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	24.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.21 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.57 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.05 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.76 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	0.76 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.05 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.76 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.76 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.76 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.05 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.76 %
unclassified Candidatus Accumulibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter	0.76 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.76 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.05 %
Candidatus Accumulibacter sp. SK-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp. SK-11	0.76 %
Phenylobacterium zucineum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	0.76 %
Betaproteobacteria bacterium GR16-43	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	0.76 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_100493237	All Organisms → cellular organisms → Bacteria → Proteobacteria	1370	Open in IMG/M
3300004092\|Ga0062389_102187722	Not Available	727	Open in IMG/M
3300005610\|Ga0070763_10932976	Not Available	518	Open in IMG/M
3300005764\|Ga0066903_101034255	Not Available	1506	Open in IMG/M
3300005764\|Ga0066903_104837494	Not Available	716	Open in IMG/M
3300005764\|Ga0066903_105867923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300005764\|Ga0066903_106988937	Not Available	585	Open in IMG/M
3300005921\|Ga0070766_11064716	Not Available	557	Open in IMG/M
3300006028\|Ga0070717_10659683	All Organisms → cellular organisms → Bacteria → Proteobacteria	950	Open in IMG/M
3300006163\|Ga0070715_10988214	Not Available	524	Open in IMG/M
3300006175\|Ga0070712_101122978	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300006176\|Ga0070765_100391990	Not Available	1295	Open in IMG/M
3300006176\|Ga0070765_101852845	Not Available	565	Open in IMG/M
3300010046\|Ga0126384_12205412	Not Available	530	Open in IMG/M
3300010048\|Ga0126373_11055253	Not Available	878	Open in IMG/M
3300010048\|Ga0126373_11487736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp. SK-11	742	Open in IMG/M
3300010358\|Ga0126370_10065636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2377	Open in IMG/M
3300010359\|Ga0126376_12208667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	595	Open in IMG/M
3300010361\|Ga0126378_11096643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	897	Open in IMG/M
3300010366\|Ga0126379_10518476	Not Available	1266	Open in IMG/M
3300010376\|Ga0126381_100497601	Not Available	1719	Open in IMG/M
3300010376\|Ga0126381_101966517	Not Available	843	Open in IMG/M
3300010398\|Ga0126383_13176459	Not Available	537	Open in IMG/M
3300012961\|Ga0164302_11611182	Not Available	540	Open in IMG/M
3300016270\|Ga0182036_10051258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2593	Open in IMG/M
3300016294\|Ga0182041_10046513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2905	Open in IMG/M
3300016294\|Ga0182041_11268799	Not Available	673	Open in IMG/M
3300016294\|Ga0182041_12138917	Not Available	522	Open in IMG/M
3300016319\|Ga0182033_11243466	Not Available	668	Open in IMG/M
3300016319\|Ga0182033_11875654	Not Available	545	Open in IMG/M
3300016341\|Ga0182035_11085674	Not Available	712	Open in IMG/M
3300016341\|Ga0182035_11277720	Not Available	657	Open in IMG/M
3300016341\|Ga0182035_11744722	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300016371\|Ga0182034_10263607	Not Available	1365	Open in IMG/M
3300016371\|Ga0182034_11172584	Not Available	668	Open in IMG/M
3300016371\|Ga0182034_11356780	Not Available	621	Open in IMG/M
3300016404\|Ga0182037_10023649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3809	Open in IMG/M
3300016404\|Ga0182037_10552569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	972	Open in IMG/M
3300018482\|Ga0066669_12333811	Not Available	511	Open in IMG/M
3300020581\|Ga0210399_10342745	Not Available	1248	Open in IMG/M
3300020581\|Ga0210399_10738193	All Organisms → cellular organisms → Bacteria → Proteobacteria	807	Open in IMG/M
3300020582\|Ga0210395_10496946	Not Available	918	Open in IMG/M
3300020583\|Ga0210401_10110540	All Organisms → cellular organisms → Bacteria	2580	Open in IMG/M
3300020583\|Ga0210401_11508191	Not Available	529	Open in IMG/M
3300021088\|Ga0210404_10808317	Not Available	536	Open in IMG/M
3300021171\|Ga0210405_11050573	Not Available	611	Open in IMG/M
3300021178\|Ga0210408_10010289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7806	Open in IMG/M
3300021178\|Ga0210408_10922538	All Organisms → cellular organisms → Bacteria → Proteobacteria	679	Open in IMG/M
3300021178\|Ga0210408_11521892	Not Available	500	Open in IMG/M
3300021180\|Ga0210396_11386320	Not Available	582	Open in IMG/M
3300021180\|Ga0210396_11710645	Not Available	511	Open in IMG/M
3300021403\|Ga0210397_10483310	Not Available	936	Open in IMG/M
3300021405\|Ga0210387_11238934	Not Available	647	Open in IMG/M
3300021406\|Ga0210386_10554517	Not Available	993	Open in IMG/M
3300021432\|Ga0210384_11874819	Not Available	505	Open in IMG/M
3300021477\|Ga0210398_10144815	All Organisms → cellular organisms → Bacteria	1933	Open in IMG/M
3300021478\|Ga0210402_11824459	Not Available	534	Open in IMG/M
3300021560\|Ga0126371_10188893	All Organisms → cellular organisms → Bacteria	2149	Open in IMG/M
3300021560\|Ga0126371_10278353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1795	Open in IMG/M
3300021560\|Ga0126371_11182506	Not Available	902	Open in IMG/M
3300021560\|Ga0126371_13515880	Not Available	529	Open in IMG/M
3300025915\|Ga0207693_10660006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	812	Open in IMG/M
3300025915\|Ga0207693_11086073	Not Available	608	Open in IMG/M
3300025916\|Ga0207663_11475322	Not Available	548	Open in IMG/M
3300026999\|Ga0207949_1000647	All Organisms → cellular organisms → Bacteria	2537	Open in IMG/M
3300027047\|Ga0208730_1008422	Not Available	1078	Open in IMG/M
3300027783\|Ga0209448_10311739	Not Available	515	Open in IMG/M
3300027855\|Ga0209693_10593424	Not Available	523	Open in IMG/M
3300028047\|Ga0209526_10747153	Not Available	611	Open in IMG/M
3300031474\|Ga0170818_114151444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M
3300031543\|Ga0318516_10089925	Not Available	1723	Open in IMG/M
3300031545\|Ga0318541_10320244	Not Available	865	Open in IMG/M
3300031545\|Ga0318541_10377082	Not Available	792	Open in IMG/M
3300031679\|Ga0318561_10606672	Not Available	603	Open in IMG/M
3300031679\|Ga0318561_10651816	Not Available	579	Open in IMG/M
3300031680\|Ga0318574_10389730	Not Available	814	Open in IMG/M
3300031680\|Ga0318574_10757214	Not Available	569	Open in IMG/M
3300031682\|Ga0318560_10368771	Not Available	776	Open in IMG/M
3300031682\|Ga0318560_10694531	Not Available	550	Open in IMG/M
3300031719\|Ga0306917_10337045	Not Available	1170	Open in IMG/M
3300031719\|Ga0306917_10862844	Not Available	709	Open in IMG/M
3300031765\|Ga0318554_10529173	Not Available	666	Open in IMG/M
3300031768\|Ga0318509_10666302	Not Available	578	Open in IMG/M
3300031768\|Ga0318509_10823133	Not Available	513	Open in IMG/M
3300031771\|Ga0318546_11089081	Not Available	562	Open in IMG/M
3300031777\|Ga0318543_10142305	Not Available	1051	Open in IMG/M
3300031780\|Ga0318508_1172650	Not Available	616	Open in IMG/M
3300031782\|Ga0318552_10698544	Not Available	517	Open in IMG/M
3300031798\|Ga0318523_10367999	Not Available	715	Open in IMG/M
3300031805\|Ga0318497_10117266	Not Available	1439	Open in IMG/M
3300031833\|Ga0310917_10462224	Not Available	863	Open in IMG/M
3300031845\|Ga0318511_10552394	Not Available	535	Open in IMG/M
3300031845\|Ga0318511_10622446	Not Available	504	Open in IMG/M
3300031879\|Ga0306919_10707438	Not Available	776	Open in IMG/M
3300031890\|Ga0306925_10152863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2484	Open in IMG/M
3300031890\|Ga0306925_11562076	Not Available	643	Open in IMG/M
3300031890\|Ga0306925_11780239	Not Available	591	Open in IMG/M
3300031897\|Ga0318520_10716692	Not Available	625	Open in IMG/M
3300031910\|Ga0306923_10077002	All Organisms → cellular organisms → Bacteria	3733	Open in IMG/M
3300031912\|Ga0306921_12155316	Not Available	589	Open in IMG/M
3300031945\|Ga0310913_11193250	Not Available	530	Open in IMG/M
3300031947\|Ga0310909_10076525	All Organisms → cellular organisms → Bacteria	2642	Open in IMG/M
3300031954\|Ga0306926_10598437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium GR16-43	1347	Open in IMG/M
3300031954\|Ga0306926_10927241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1041	Open in IMG/M
3300031962\|Ga0307479_11858237	Not Available	553	Open in IMG/M
3300032001\|Ga0306922_10345356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1597	Open in IMG/M
3300032001\|Ga0306922_10362907	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300032001\|Ga0306922_11278569	Not Available	743	Open in IMG/M
3300032001\|Ga0306922_11540414	Not Available	663	Open in IMG/M
3300032001\|Ga0306922_12269810	Not Available	521	Open in IMG/M
3300032025\|Ga0318507_10106336	Not Available	1174	Open in IMG/M
3300032025\|Ga0318507_10480136	Not Available	541	Open in IMG/M
3300032035\|Ga0310911_10870071	Not Available	520	Open in IMG/M
3300032042\|Ga0318545_10287517	Not Available	591	Open in IMG/M
3300032059\|Ga0318533_10800539	Not Available	692	Open in IMG/M
3300032059\|Ga0318533_10912946	Not Available	644	Open in IMG/M
3300032059\|Ga0318533_11190478	Not Available	558	Open in IMG/M
3300032059\|Ga0318533_11382448	Not Available	514	Open in IMG/M
3300032076\|Ga0306924_10157268	All Organisms → cellular organisms → Bacteria	2603	Open in IMG/M
3300032076\|Ga0306924_10403293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	1565	Open in IMG/M
3300032261\|Ga0306920_104253515	Not Available	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.71%
Aquatic	Environmental → Aquatic	2.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.71%
Freshwater	Environmental → Aquatic → Freshwater	2.29%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.97%
Loam	Environmental → Terrestrial → Soil → Loam	13.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.29%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	70.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.58%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.58%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.05%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1004932373	3300004092	Bog Forest Soil	MRLDPEEQIIADALDEAELDDANERGVGARIEFRREGHAKVTITISRELVE
Ga0062389_1021877221	3300004092	Bog Forest Soil	MRLDPEEQIIAAAVDEAELDDANERGVGARIEFRREGHAKVTITISRELVERAR
Ga0070763_109329762	3300005610	Soil	MRRVRDELDPEEQIIAAALDQAELDDANERGVAARIEFRPEGHAKVTFTISREFVETARALDWTTGE
Ga0066903_1010342553	3300005764	Tropical Forest Soil	MKLDPEERIIAAALDEAEFEKANETGAGARIDFKPEGHAKVTITISRQLVETARALNLTT
Ga0066903_1048374942	3300005764	Tropical Forest Soil	MKFDPEERVIAAALDEAELEVANEYGAGALIEFKPEGHVEVTITISRQLVESARALNLTTLELFTE
Ga0066903_1058679233	3300005764	Tropical Forest Soil	VKLDPKERILATPDDEAELDDANERGAGAQIEFMREGHAKVTITISRQLVEQAR
Ga0066903_1069889371	3300005764	Tropical Forest Soil	VRNGREVKPDPEERIFAAPDDEAELDDANGRGAGAQIEFMREGHAKVTI
Ga0070766_110647162	3300005921	Soil	VKLDPEELVIAAALDRAELEDANERGAGARIEFKPEGHAKVTITISRELVEQARALDLT
Ga0070717_106596831	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKLDPEEQIFAAALDQAELDDANERVVGARIEFRREGHARVTMTISRALVEKATALNWST
Ga0070715_109882142	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKLDPEEQIFAAALDQAELDDANERVVGARIEFRREGHARVTMTISRALVEKVT
Ga0070712_1011229781	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKLDPEEQIIAAALDQTELDDANERGVGARIEFRREGHARVTMTISRALVEKATALNWSTGELFA
Ga0070765_1003919901	3300006176	Soil	MKLDPEEQIIAAAFEQAELDDANERGVAARIEFRPEGHAKLTFTISREFVETA
Ga0070765_1018528453	3300006176	Soil	VKLDPEEWVIAAALDRAELEDANERGAGARIEFKPEGHAKVTITISR
Ga0126384_122054121	3300010046	Tropical Forest Soil	VKLDPEERIIAAALDQAELDDANDRGAGARIEARPEGHAKVTITISRELVEQAR
Ga0126373_110552531	3300010048	Tropical Forest Soil	VKLNPEERIIAAALDPAELDDANEHGAGARIEFKRDGHAKVTITISRELVERARALDFTT
Ga0126373_114877361	3300010048	Tropical Forest Soil	LDPEERIIAAALDEAEPDNASKRGAGAQIEFMREGHAKVTITISRQL
Ga0126370_100656363	3300010358	Tropical Forest Soil	VKLDIEKRILAAPDDEAELNDANERDAGAQIEFMREGHAKVTITISRQLVE
Ga0126376_122086673	3300010359	Tropical Forest Soil	VKPDPEERILATPDDEAELDDANGRGAGAQIEFMREGHAKVTITISRQLVEQ
Ga0126378_110966432	3300010361	Tropical Forest Soil	MGGNGEVKLDPEERSIAAALDQAELDDANERGIGARIEFKREGHAKVTLTISRELLE
Ga0126379_105184761	3300010366	Tropical Forest Soil	MKLDPEERIIAAALDEAEFEKANETGAGARIDFKPEGHAKVTITISRQLVETARALNLTTLELI
Ga0126381_1004976011	3300010376	Tropical Forest Soil	MKFDPEERVIPAALDEAELEVANEYGAGALIEFKPEGHVKVTITISRQLVETARAL
Ga0126381_1019665172	3300010376	Tropical Forest Soil	LKLDAEERVIAASSEQAELDDANEYGAGARVEFKREGHAKVTITISRQLVE
Ga0126381_1043595472	3300010376	Tropical Forest Soil	MRNGREVKLDPEDRTLATPDDEAELADVSERGAGAQIEFMREGYANVTIMISRELVEQCPSSEFLRQRDN*
Ga0126383_131764592	3300010398	Tropical Forest Soil	MKFDPEERVIAAALDEAELEAANEYGAGALIEFKPEGHVKVTITISRQLVETAR
Ga0164302_116111822	3300012961	Soil	MKLDPEEQIFAAALDQAELDDANERGVGARIEFRREGHARVTMTISRALVE
Ga0182036_100512581	3300016270	Soil	MRLDPEEQIIAAAVDEAELADANERGVGARIEFRREGHAKVTITI
Ga0182041_100465135	3300016294	Soil	VKLDPEEQIIAVALDQAELDDANEHGAAARIEFKREGHAKVTITISRELVEQARALDLTTGE
Ga0182041_112687992	3300016294	Soil	VKLDPEERIIATALDQAELDDAKERGAGARIEFNREGHATVTITISRELVERARALDLTTAELFAEAARALL
Ga0182041_121389171	3300016294	Soil	MAAALDQAELDDANERGAGARIEFKPEGHAKVTITISRELVERARALDLTTGELFAEAIRLAV
Ga0182033_112434661	3300016319	Soil	VKPDPEERILAALDDEAELDDANERGAGAQIEFMREGHAKVTITISRQL
Ga0182033_118756541	3300016319	Soil	VKLAPEERIIDAALDQAELDDANERGAGARIEFNPEGHAKVTITISRELVEQAR
Ga0182035_110856742	3300016341	Soil	MRLDPEEQIIAAAVDEAELADANERGVGARIEFRREGHAKVTITISRELVERARALDLTTGELFAE
Ga0182035_112777201	3300016341	Soil	MARVKLDPEERIVAAALNQAELDDANERGPGARIEFKQEGQAKVTNAMSRELVEQARVRS
Ga0182035_117447222	3300016341	Soil	MKLDPEEQIIAAALDQAELDDANERGVAARIEFRPEGHAKVTFTISREFVE
Ga0182034_101685011	3300016371	Soil	VKLDTEERILVTLDDEAELDDANKRGAGARIEFMREGHAKVTITISRQLVEQARALDMTTRELY
Ga0182034_102636073	3300016371	Soil	MVRVKLDPEERIISAALEQAEVDDANERGAGARIEFKPEGHAKVTITISRELVEQARALDLTTGELFAEA
Ga0182034_111725842	3300016371	Soil	VRSDPEEQIIAAALDQAELDDANERGAGARIEFKREGHAKVTITISRELVE
Ga0182034_113567801	3300016371	Soil	VKLDPEERIIAAALDQAEFDDANERGAGVRIEFKPEGYAKVTITIS
Ga0182037_100236494	3300016404	Soil	MRLDPEEQIIAAAVDEAELADANELGVGARIEFRREGHAKVTITISRELVERARALDLT
Ga0182037_105525692	3300016404	Soil	VKLDPEERTIDAALDQAEVEDANERGAGARIEFKREGHAKVTITISRELVD
Ga0182039_110764581	3300016422	Soil	PTPVLFCQRQLDARNGREVKPDPEERILAALDDEAELDDANERGAGAQIEFMREGHAKVTITISRRLVEQAKALDMTT
Ga0066669_123338111	3300018482	Grasslands Soil	MKLDPEERIIAAALDQAALDEANERGAGAWIEFSREGHAKVTITISHELVAKAMTLDWSTGEL
Ga0210399_103427451	3300020581	Soil	MRLDPEEQIIAAAVDEADLDDANERGVGARIEFRREGHAKVTITISRELVE
Ga0210399_107381931	3300020581	Soil	VKRDAEERIIAAALDQAELDDANERGAGARIEFKPEGHAKVTITISRELVEQARALDLTTRELV
Ga0210395_104969462	3300020582	Soil	MKLDPEEQIIAAAFDQAELDDANERGVAARIEFRPEGHAKVTFTISREFVETARA
Ga0210401_101105401	3300020583	Soil	MKLDPEEQIIAAAFDQAELDDANERGVAARIEFRPEGHAKVTFTISREFVETARALDW
Ga0210401_115081911	3300020583	Soil	MKLDPEEQIIAAALDQTELDDANERGVGARIEFRREGHARVTMTISRALVEKATARRSS
Ga0210404_108083171	3300021088	Soil	MKLDPEEQIIAAALDQAELDDANERGVGARIEFGREGHARVTMTISRALEI
Ga0210405_110505731	3300021171	Soil	MKLDPEEQIIAAALDQAELDDANERGVAARIEFRSEGHAKVTFTISREFVETARALDWTT
Ga0210408_100102891	3300021178	Soil	MKLDPEEQIFAAALDQAELDDANERVVRARIEFRREGHARVTMTISR
Ga0210408_109225383	3300021178	Soil	MKLDPEEQIIAATLGQADLDDANERVAGARIEFRREGHARVTVTISRALVEKAT
Ga0210408_115218921	3300021178	Soil	MKLDPEEQIIAAALDQAELDDANERGVAARIEFRSEGHAKVTFTISREFVETARALD
Ga0210396_113863201	3300021180	Soil	MKLDPEEQIIAAALDQAELDDANERGVAARIEFRPEGYAKVTFTISREFVETA
Ga0210396_117106452	3300021180	Soil	MKLDPEEQIIAAALDQAELDDVNERGVGAQIEFRREGHARVTMTISRELVEKARALELTVFEL
Ga0210397_104833102	3300021403	Soil	MKLDPEEQIIAAALDQAELDDANERGVAARIEFRPGGHAKVTFTISREFVETARA
Ga0210387_112389341	3300021405	Soil	MRLDPEEQIIAAAVDEAELDDANERGVGARIEFRREGHAKVTITISRELVERA
Ga0210386_105545173	3300021406	Soil	VVKLDPEERIIAVALDQAELDDANECGAGAQIEFKSEGHVRVTITISRQLVEQA
Ga0210384_118748191	3300021432	Soil	MKLDPEEQIIAAALDQAELDDANERGVGAQIEFRREGHAKVSITISRELVDR
Ga0210398_101448151	3300021477	Soil	MKLDPEEQIIAAAFEQAELDDANERGVAARIEFRPEGHAKVTFTISREFVETARALD
Ga0210402_118244593	3300021478	Soil	VKLDPEEWVIAAALDRAELEDANERGAGARIEFKPEGHAKVTITISRELVEQARALDLTIWEL
Ga0126371_101888935	3300021560	Tropical Forest Soil	MRLDPEERIIAAALDKAEIEDANERGAGARIEFKPEGHAKVTITISRELVECARAL
Ga0126371_102783531	3300021560	Tropical Forest Soil	VKLDPEERIIAAALDQAELDDAIEHGADAQIEFKPEGYATVTITIPRELVEKARALDLTIWELLS
Ga0126371_111825062	3300021560	Tropical Forest Soil	VKLDPEEQVIAASIEQAELDDANERGARARIEFKRGGDAEVTITISRQLVEQARALDLTTLDLFVE
Ga0126371_135158801	3300021560	Tropical Forest Soil	MRLDPEERIIAAALNEAEIEDANERGAGARIEFKPEGHAKVTITISREL
Ga0126371_138702411	3300021560	Tropical Forest Soil	VRNGREVKPDPEERILATPDDEAELDDANGRGAGAQIEFMREGHAKVTITISRQLVEQAKALNM
Ga0207693_106600063	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRVDPEEQIIAAALDQAELDDANERGVAARKEFRPEGHAKVTFTISREFVETARALDWTT
Ga0207693_110860731	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKLDPEEQIIAAALDQTELDDANERGVGARIEFRREGHARVTMTISRALVEKATALNWST
Ga0207663_114753221	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKLDPEEQIIAAALDQAELDDANERGVGVRIEFRREGHARVTMTISRALVEKATALNWSTGEL
Ga0207949_10006474	3300026999	Forest Soil	MKLDPEEQIIAAAFEQAELDDANERGVAARIEFRPEGHAKVTFTLSREFVETARALDWTT
Ga0208730_10084222	3300027047	Forest Soil	VKLDPEELVIAAALDRAELEDANERGAGARIEFKPEGHAKVTITISRELVEQARALDLTIWELFAEAL
Ga0209448_103117391	3300027783	Bog Forest Soil	MRLDPEEQIIAAAVDEAELDDANERGVGARIEFRREGHAKVTITISRELVERARALDLTTGELFA
Ga0209693_105934241	3300027855	Soil	MRRVRDELDPEEQIIAAALDQAELDDANERGVAARIEFRPEGHAKVTFTISREFVETARALDWTTGELV
Ga0209526_107471533	3300028047	Forest Soil	MKLDPEEQIIAAALDQAELDDANERGVGARIEFGREGHARVTMTISRALV
Ga0170818_1141514441	3300031474	Forest Soil	MVSEMKLDPEEQIITAALGQADLDEANERVVGARIEFRTEGHARVTTTISREL
Ga0318516_100899254	3300031543	Soil	VKLDSEERIITAALDEADLDDANERGAGARIEFKREGHAKVTITISRKLV
Ga0318541_103202441	3300031545	Soil	VKLDPEERIIAAALDQAEFDDANERGAGVRIEFKPEGYAKVTITISRIG
Ga0318541_103770822	3300031545	Soil	VKLNPEERIIAAVLDPAELDDANEHGAGARIEFKRDGHAKVTITISRELVERARALDLTTLELVAE
Ga0318542_107306361	3300031668	Soil	LRNGREVKLDTEERILVTLDDEAELDDANKRGAGARIEFMREGHAKVTITISRQLVEQARALDMTTRELFAEV
Ga0318561_106066722	3300031679	Soil	MRLDPEEQIIAAAVDEAELADANELGVGARIEFRREGHAKVTITISRELVERARALDLTTGELFAE
Ga0318561_106518161	3300031679	Soil	MARVKLDPEERIVAAALNQAELDDATERGAGARIEFKREGHARVTITISRELVERAR
Ga0318574_101169591	3300031680	Soil	VKLDTEERILVTLDDEAELDDANKRGAGARIEFMREGHAKVTITISRQLVEQARALDMTTRELFAEV
Ga0318574_103897301	3300031680	Soil	VKLDPEERIIAAALEQAELDDANERGAGARIEFKREGHAEVTITISRELVEVVTRI
Ga0318574_107572142	3300031680	Soil	VKLDPEERIIAAALDQAELDDANERGAGAQIEFRPEGHARVTITISRELVE
Ga0318560_103687711	3300031682	Soil	VKLDPEERIIAAALDQAEFDDANERGAGVRIEFKPEGYAKVTITISRIC
Ga0318560_106945311	3300031682	Soil	VKLDPEEQIITAALDQSELDDANERGAGARIEFKREGHAKVTITISRELVEQARALDLTTRE
Ga0306917_103370451	3300031719	Soil	MRLDPEEQIIAAAVDEAELEDAKERGAGARIEFRREGHAKVTITISR
Ga0306917_108628441	3300031719	Soil	VKLDPEERIIATALDQAELDDANERGAGARIEFKPEGHAKVTITISRELVEQARAL
Ga0318554_105291731	3300031765	Soil	MARVKLDPEERIVAAALNQAELDDATERGAGARIEFKREGHARVTITISRELVERARARDLTT
Ga0318509_106663021	3300031768	Soil	VKLDREERINAAALDQAELNDANERGAGARIEFKREGHAKVTITISRELVERARALD
Ga0318509_108231331	3300031768	Soil	MPEADRTRGMLKVKLDPEEQIIAAALDQAEPDDANERGAGARIEFKREGHARVTITISRELVEHAR
Ga0318546_110890811	3300031771	Soil	VKLDPEEQIIAAALDQAELDDANVRGAGARIEFKREGHARVTITISRELVEQARARDLTTGELFA
Ga0318543_101423053	3300031777	Soil	MRLDPEEQIIAAAVDEAELADANELGVGARIEFRREGHAKVTITISRELVERARALDLTT
Ga0318508_11726502	3300031780	Soil	MRLDPEEQIIAAAVDEAELADANERGVGARIEFRREGHAKVTITISRELVERA
Ga0318552_106985441	3300031782	Soil	VKLDREERINAAALDQAELNDANERGAGARIEFKREGHAKVTITISRELVEQARALDSTTRELF
Ga0318523_103679992	3300031798	Soil	VKLDSEERIITAALDEADLDDANERGAGARIEFKREGHAKVTITISRKLVQQARMLD
Ga0318497_101172661	3300031805	Soil	VKLDSEERIITAALDEADLDDANERGAGARIEFKRQGHAKVTITISRKLVQQARMLD
Ga0310917_104622241	3300031833	Soil	VKLDPEEQIITAALDQSELDDANERGAGARIEFKREGHAKVTITISRELVEQARALDLTTRELFAE
Ga0318511_105523942	3300031845	Soil	VKLDPEERIIGAALEQAEVDDTNERRAGARIDFKPEGHAKVTITISRELVEQARA
Ga0318511_106224461	3300031845	Soil	VKLDPEEQIIAVALDQAELDDANEHGAAARIEFKREGHAKVTITISRELVEQARALDLTTGELF
Ga0306919_107074381	3300031879	Soil	VKLDPEERIIAAALNQAELDDANERGPGARIEFKQEGQAKVTNAMSRELVEQARVRSI
Ga0306925_101528632	3300031890	Soil	VKLNPEERIIAAVLDPAELDDANEHGAGARIEFKRDGHAKVTITISRELVERARALDLTTLELVAEALR
Ga0306925_115620761	3300031890	Soil	VELDSEERIIAAALDQAELDDANERGAGARIEFKPEGHAKVTITISRELVEQARALDLTTGEL
Ga0306925_117802391	3300031890	Soil	VKLDPEERTIATALDQAELDDANERGAGVRIEFKREGHAKVTITIS
Ga0318536_105267641	3300031893	Soil	LRNGREVKLDTEERILVTLDDEAELDDANKRGAGARIEFMREGHAKVTITISRQLVEQARALDM
Ga0318551_108265842	3300031896	Soil	LRNGREVKLDTEERILVTLDDEAELDDANKRGAGARIEFMREGHAKVTITISRQLVEQARALDMT
Ga0318520_107166921	3300031897	Soil	VKLDREERINAAALDQAELNDANERGAGARIEFKREGHAKVTITISRELVERARALDLTTGELFA
Ga0306923_100770022	3300031910	Soil	VKPDPEERILAALDDEAELDDANERGAGAQIEFMREGHAKVTITISRRLVEQAKALDMTT
Ga0306921_121553161	3300031912	Soil	VKLDPEERIIGAALDQAELDDANERRAGARIEFRPEGHAKVTITISREL
Ga0310913_111932501	3300031945	Soil	MRLDPEEQIIAAAVDEAELEDAKERGAGARIEFRREGHAKVTITISRE
Ga0310909_100765251	3300031947	Soil	MRLDPEEQIIAAAVDEAELADANERGVGARIEFRREGHAKVTITISRELVERARALDLTT
Ga0306926_105984371	3300031954	Soil	MRLDPEEQIIAAAVDEAELEDANERGVGARSEFRREGHAKVTITISRELVERARALDLTTGEL
Ga0306926_109272412	3300031954	Soil	VKLDPEERIIAAALEQAELDDANERGAGARIEFKREGHAKVTITISRELVEVVTRI
Ga0307479_118582371	3300031962	Hardwood Forest Soil	MRLDPEEQIIAAAVDEAELADANERGVGARIEFRREGHAKVTITISREL
Ga0318531_105350362	3300031981	Soil	LRNGREVKLDTEERILVTLDDEAELDDANKRGAGARIEFMREGHAKVTITISRQLVEQARALDMTTREL
Ga0306922_103453561	3300032001	Soil	VKLDPEERTIDAALDQAEVEDANERGAGARIEFKREGHAKVTITISRELVDQARALGLTP
Ga0306922_103629071	3300032001	Soil	VKLDPEEQIIGAALDQAELDDANERGAGARIEFKREGHAKVTITISRELVEQARALDLTT
Ga0306922_112785691	3300032001	Soil	VKLAPEERIIAAALDQAELDNANERGAGARIEFNPEGHAKVTITISRELVEQ
Ga0306922_115404141	3300032001	Soil	VKLAPEERIIDAALDQAELDDANERGAGARIEFNPEGHAKVTITISRELVEQARALGLTTGELFA
Ga0306922_122698102	3300032001	Soil	MARVKLDPEERIVAAALNQAELDDATERGAGARIEFKREGHARVTITISRELVERARARDLTTWELFVE
Ga0318507_101063362	3300032025	Soil	MRLDPEEQIIAAAVDEAELADANERGVGARIEFRREGHAKVTITISRELVERARAL
Ga0318507_104801362	3300032025	Soil	VKLDLEERIIAAALEQAELDDANERGAGARIEFKREGHAEVTITISRELVEVVTRI
Ga0310911_108700711	3300032035	Soil	VKLDPEEQIIAAALDQAEPEDAIEQGAGARIEFKREGGAKVTITISREDPVGPPWRVRFS
Ga0318545_102875171	3300032042	Soil	VKLDPEERIIAAASDQAELDDANEHGAGARIEFKPEGHAKVTITISRELVEQARALDLTTGELF
Ga0318533_108005391	3300032059	Soil	VKLAPEERIIAAALDQAELDNANERGAGARIEFNPEGHAKVTITISRELVEQARDGQPDRLGEELS
Ga0318533_109129462	3300032059	Soil	VKLDLEERIIAAALDQAELDDANERGAGARIEFKREGHAKVTITISREFVEQ
Ga0318533_111904781	3300032059	Soil	MRLDPEEQIIADAVDEAELEDANERGVGARIEFRREGHAKVTITISRELVERARALDLTTGELFA
Ga0318533_113824481	3300032059	Soil	VKRDAEERTIAAALDQAELDDANERSAGARIEFKREGHAKVTITISRELVEQARALDSTTRE
Ga0306924_101572681	3300032076	Soil	MRLDPEEQIIAAAVDEAELADANERGVGARIEFRREGHAKVTITISRE
Ga0306924_104032931	3300032076	Soil	MRLDPEEQIIAAAVDEAELEDAKERGAGARIEFRREGHAKVTITISRELVERARALDLTT
Ga0306924_125508742	3300032076	Soil	VRNGREVKLDPEERILATPDDEDELDDANERGAGAWIEFMREGHAKVTITISRQLVEQARALEMTTW
Ga0306920_1042535151	3300032261	Soil	VKLDPEERIIATALDQAELDDAKERGAGARIEFNREGHATVTITISREL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F062196

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences