Metagenome / Metatranscriptome Family F062204

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062204
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	101 residues
Representative Sequence	MKRALIGSLSFLAVIVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHPRQSVYR
Number of Associated Samples	107
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.00 %
% of genes near scaffold ends (potentially truncated)	29.77 %
% of genes from short scaffolds (< 2000 bps)	74.05 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.237 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.321 % of family members)
Environment Ontology (ENVO)	Unclassified (29.008 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.855 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 12.00% β-sheet: 6.00% Coil/Unstructured: 82.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF07080	DUF1348	25.19
PF14534	DUF4440	6.11
PF03459	TOBE	2.29
PF04392	ABC_sub_bind	2.29
PF11319	VasI	1.53
PF00266	Aminotran_5	1.53
PF00072	Response_reg	0.76
PF00873	ACR_tran	0.76
PF05378	Hydant_A_N	0.76
PF14417	MEDS	0.76
PF01641	SelR	0.76
PF01223	Endonuclease_NS	0.76
PF03737	RraA-like	0.76
PF07536	HWE_HK	0.76
PF02600	DsbB	0.76
PF02518	HATPase_c	0.76
PF08241	Methyltransf_11	0.76
PF11026	DUF2721	0.76
PF07883	Cupin_2	0.76
PF12697	Abhydrolase_6	0.76
PF07690	MFS_1	0.76
PF08530	PepX_C	0.76
PF01968	Hydantoinase_A	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG3558	Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily	Function unknown [S]	25.19
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.29
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	1.53
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.76
COG1495	Disulfide bond formation protein DsbB	Posttranslational modification, protein turnover, chaperones [O]	0.76
COG1864	DNA/RNA endonuclease G, NUC1	Nucleotide transport and metabolism [F]	0.76
COG2936	Predicted acyl esterase	General function prediction only [R]	0.76
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.76
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.76

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.24 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	95.42 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	92.37 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.21 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.87 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.87 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.29 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.29 %
Saccharibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Saccharibacter	0.76 %
Unclassified	root	N/A	0.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.29 %
Saccharibacter floricola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Saccharibacter → Saccharibacter floricola	0.76 %
Unclassified	root	N/A	0.76 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035918004\|FACENC_F56XM5W01B4YXJ	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
2088090014\|GPIPI_17451793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1445	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1042975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	698	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10004189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3910	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10071622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	877	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10016626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1775	Open in IMG/M
3300001867\|JGI12627J18819_10045519	All Organisms → cellular organisms → Bacteria → Proteobacteria	1834	Open in IMG/M
3300002906\|JGI25614J43888_10096442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	788	Open in IMG/M
3300002914\|JGI25617J43924_10363166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Saccharibacter → Saccharibacter floricola	503	Open in IMG/M
3300004629\|Ga0008092_11233628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	883	Open in IMG/M
3300005174\|Ga0066680_10874122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535	Open in IMG/M
3300005179\|Ga0066684_10101580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1763	Open in IMG/M
3300005184\|Ga0066671_10020132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2932	Open in IMG/M
3300005332\|Ga0066388_100318002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2202	Open in IMG/M
3300005332\|Ga0066388_100623864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1697	Open in IMG/M
3300005332\|Ga0066388_100826579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1515	Open in IMG/M
3300005332\|Ga0066388_101000208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1400	Open in IMG/M
3300005332\|Ga0066388_101659775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1128	Open in IMG/M
3300005332\|Ga0066388_104704648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300005332\|Ga0066388_105123373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300005363\|Ga0008090_10028058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1028	Open in IMG/M
3300005436\|Ga0070713_100032133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4189	Open in IMG/M
3300005436\|Ga0070713_100790168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	909	Open in IMG/M
3300005437\|Ga0070710_10013600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4080	Open in IMG/M
3300005457\|Ga0070662_101525053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	576	Open in IMG/M
3300005467\|Ga0070706_100803467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	871	Open in IMG/M
3300005468\|Ga0070707_102140415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300005518\|Ga0070699_100001574	All Organisms → cellular organisms → Bacteria → Proteobacteria	20871	Open in IMG/M
3300005546\|Ga0070696_100371833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1112	Open in IMG/M
3300005549\|Ga0070704_101380109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300005561\|Ga0066699_10119830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1761	Open in IMG/M
3300005575\|Ga0066702_10486948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	752	Open in IMG/M
3300005713\|Ga0066905_100521886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	992	Open in IMG/M
3300005713\|Ga0066905_102058432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300005764\|Ga0066903_100328973	All Organisms → cellular organisms → Bacteria	2448	Open in IMG/M
3300005983\|Ga0081540_1017646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4409	Open in IMG/M
3300006028\|Ga0070717_10262054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1529	Open in IMG/M
3300006028\|Ga0070717_10385274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1257	Open in IMG/M
3300006049\|Ga0075417_10398898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	680	Open in IMG/M
3300006051\|Ga0075364_10691623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300006163\|Ga0070715_10718341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300006172\|Ga0075018_10143425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1097	Open in IMG/M
3300006175\|Ga0070712_101292927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300006797\|Ga0066659_10301884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1222	Open in IMG/M
3300006845\|Ga0075421_100051093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5233	Open in IMG/M
3300006845\|Ga0075421_101435609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	758	Open in IMG/M
3300006847\|Ga0075431_101454703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300006852\|Ga0075433_10913005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	766	Open in IMG/M
3300006854\|Ga0075425_101889963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	669	Open in IMG/M
3300006904\|Ga0075424_100462937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1353	Open in IMG/M
3300006904\|Ga0075424_100613786	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300007255\|Ga0099791_10481970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300007258\|Ga0099793_10021467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2656	Open in IMG/M
3300009012\|Ga0066710_100411650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2018	Open in IMG/M
3300009143\|Ga0099792_10576742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714	Open in IMG/M
3300009156\|Ga0111538_13934525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300009162\|Ga0075423_11919218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300009792\|Ga0126374_10043221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2227	Open in IMG/M
3300010043\|Ga0126380_10155749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1470	Open in IMG/M
3300010047\|Ga0126382_10453574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1017	Open in IMG/M
3300010359\|Ga0126376_11790824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	651	Open in IMG/M
3300010362\|Ga0126377_10418685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1355	Open in IMG/M
3300010362\|Ga0126377_12007015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300010366\|Ga0126379_10170025	All Organisms → cellular organisms → Bacteria	2059	Open in IMG/M
3300010366\|Ga0126379_10604123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1183	Open in IMG/M
3300010371\|Ga0134125_10287976	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300010375\|Ga0105239_10425759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1504	Open in IMG/M
3300010398\|Ga0126383_10579233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1191	Open in IMG/M
3300010398\|Ga0126383_10801484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1025	Open in IMG/M
3300010398\|Ga0126383_11201780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	848	Open in IMG/M
3300011269\|Ga0137392_10466916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1048	Open in IMG/M
3300011271\|Ga0137393_10948210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734	Open in IMG/M
3300012198\|Ga0137364_10418771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1003	Open in IMG/M
3300012198\|Ga0137364_10614235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	819	Open in IMG/M
3300012199\|Ga0137383_10812279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300012200\|Ga0137382_10059041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2422	Open in IMG/M
3300012202\|Ga0137363_10029646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3768	Open in IMG/M
3300012202\|Ga0137363_10472893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1050	Open in IMG/M
3300012205\|Ga0137362_10589803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	959	Open in IMG/M
3300012205\|Ga0137362_10851416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	780	Open in IMG/M
3300012208\|Ga0137376_10138187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2091	Open in IMG/M
3300012362\|Ga0137361_10488422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1131	Open in IMG/M
3300012362\|Ga0137361_11359591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300012363\|Ga0137390_10687156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	986	Open in IMG/M
3300012469\|Ga0150984_105205924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	574	Open in IMG/M
3300012582\|Ga0137358_10657774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M
3300012917\|Ga0137395_10071641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2240	Open in IMG/M
3300012923\|Ga0137359_10002300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15299	Open in IMG/M
3300012923\|Ga0137359_10068516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3100	Open in IMG/M
3300012951\|Ga0164300_11104357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300012957\|Ga0164303_10171751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1171	Open in IMG/M
3300012961\|Ga0164302_10172507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1299	Open in IMG/M
3300012971\|Ga0126369_10008197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7903	Open in IMG/M
3300012971\|Ga0126369_10257763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1720	Open in IMG/M
3300012985\|Ga0164308_10417398	All Organisms → cellular organisms → Bacteria → Proteobacteria	1102	Open in IMG/M
3300012986\|Ga0164304_10049779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2275	Open in IMG/M
3300012989\|Ga0164305_10018886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3541	Open in IMG/M
3300013306\|Ga0163162_10677444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1154	Open in IMG/M
3300015371\|Ga0132258_10054618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9162	Open in IMG/M
3300018431\|Ga0066655_11092204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300018482\|Ga0066669_10324848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1263	Open in IMG/M
3300021168\|Ga0210406_10088816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2636	Open in IMG/M
3300021168\|Ga0210406_10197525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1669	Open in IMG/M
3300021478\|Ga0210402_10082001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2870	Open in IMG/M
3300021560\|Ga0126371_10229423	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300021560\|Ga0126371_10437470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1453	Open in IMG/M
3300022530\|Ga0242658_1092212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300024288\|Ga0179589_10171803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	935	Open in IMG/M
3300025898\|Ga0207692_10001828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8078	Open in IMG/M
3300025906\|Ga0207699_10403952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	973	Open in IMG/M
3300025922\|Ga0207646_10925515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	773	Open in IMG/M
3300025939\|Ga0207665_10089857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2128	Open in IMG/M
3300026304\|Ga0209240_1008693	All Organisms → cellular organisms → Bacteria → Proteobacteria	3839	Open in IMG/M
3300026320\|Ga0209131_1046900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2454	Open in IMG/M
3300026542\|Ga0209805_1182143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	928	Open in IMG/M
3300026552\|Ga0209577_10122627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2079	Open in IMG/M
3300026557\|Ga0179587_10525124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	777	Open in IMG/M
3300027903\|Ga0209488_10168648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1654	Open in IMG/M
3300027909\|Ga0209382_10331512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1709	Open in IMG/M
3300028878\|Ga0307278_10187035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	924	Open in IMG/M
3300028881\|Ga0307277_10020590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2582	Open in IMG/M
3300031545\|Ga0318541_10810361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300031573\|Ga0310915_10418045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	952	Open in IMG/M
3300031748\|Ga0318492_10570214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300031795\|Ga0318557_10507172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300031890\|Ga0306925_10880821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	922	Open in IMG/M
3300032054\|Ga0318570_10554609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300032059\|Ga0318533_10039172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3112	Open in IMG/M
3300032174\|Ga0307470_10461099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	916	Open in IMG/M
3300032180\|Ga0307471_100051905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3390	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.26%
Host-Associated	Host-Associated	13.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.50%
Plants	Host-Associated → Plants	13.74%
Aquatic	Environmental → Aquatic	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.29%
Sediment	Environmental → Aquatic → Sediment	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.89%
Loam	Environmental → Terrestrial → Soil → Loam	20.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.16%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.76%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.40%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.53%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.53%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.76%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035918004	Soil microbial communities from sample at FACE Site 2 North Carolina CO2-	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCA_4243600	2035918004	Soil	MKRALIGSLSFLAVIVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHPRQSVYR
GPIPI_02310590	2088090014	Soil	MKRALIGSLSFLAVMVGTQAANAQADINPNLYPPYRGAPAAQQLWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRQSVYR
AF_2010_repII_A01DRAFT_10429752	3300000580	Forest Soil	MKHALIGSLSVLAMIAGTAAAYAQADINPNIYPSYRGAAVAQQPSEWYATPGPVRRGNMCTVDVDAGRGYGYMKPCPAPQASAAPRVAHRAHRKTVVR*
AF_2010_repII_A1DRAFT_100041896	3300000597	Forest Soil	MKHALIGSLSVLAMIAGTAAAYAQADINPNIYPSYRGAAVAQQPSEWYATPGPVRRGNMCTVDVDAGRGYGYMKPCPAPQAAPRVAHRAHRKTVVR*
AF_2010_repII_A1DRAFT_100716221	3300000597	Forest Soil	MKHALIGSLSVLAMIAGTAAAYAQADINPNIYPSYRGAAVAQQPSEWYATPGPVRRGNMCTVDVDAGRGYGYMKPCPAPQASAXPRVAHRAHRKTVV
AF_2010_repII_A001DRAFT_100166263	3300000793	Forest Soil	MKHALIGSLSVLAMIAGTAAAYAQADINPNIYPTYRGAPVAQQPSEWYATPGPVRRGNMCAVDVDAGRGYGYMKPCPAPQAAPRVAHRTHRKTVVR*
AP72_2010_repI_A100DRAFT_10663231	3300000837	Forest Soil	GKTATFFNENFTPHSLERLSHHSALLRAFTLVVRTEKIMKHALIGSLSVLAMIAGTAAAYAQADINPNIYPSYRGAAVAQQPSEWYATPGPVRRGNMCTVDVDAGRGYGYMKPCPAPQAAPRVAHRAHRKTVVR*
JGI12627J18819_100455193	3300001867	Forest Soil	MKRALIGSLSFLAVIVATQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRQSVYR*
JGI25614J43888_100964421	3300002906	Grasslands Soil	MKHALIGGLSVLATIVGIEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPMRRGSQCAVDVDAGRGYGYMKDCPAPQASAPRQSRTRVAHRHHRTVVTR*
JGI25617J43924_103631661	3300002914	Grasslands Soil	MKHALIGGLSVLATIVGIEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPMRRGSQCAVDVDAGRGYGYMKDCPAPQASA
Ga0008092_112336281	3300004629	Tropical Rainforest Soil	MKHALIGSLSVLAMIAGTAAAYAQADINPNIYPTYRGAPVAQQPSEWYATPGPVRRGNMCAVDVDAGRGYGYMKPCPAPQTAPRVAHRSHRKTVVR*
Ga0066680_108741221	3300005174	Soil	MKHALIVASVGILASTFGVVSANAQADINPNIYPPYRGAPVAQQPWEWYASVGPVRRGNQCVADVDINRGYGYMKDCPAPQASAAPRHSRVAHRYHRKVVQR*
Ga0066684_101015802	3300005179	Soil	MKRALIGSLSVLTMMVGTQAANAQADINPNIYPTYRGAPVAQQPWEWYAGPGPVRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRVRVAHRHARQSVYR*
Ga0066671_100201326	3300005184	Soil	MKRALIGSLSVLTMMVGTQAANAQADINPNIYPTYRGAPVAQQPWEWYAGPGPVRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHARQSVYR*
Ga0066388_1003180023	3300005332	Tropical Forest Soil	MKRVLIGSLSVLAMMVGTHAANAQADINPNIYPTYRGAPVAQQPWEWYAGPGPVRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHARQSVYR*
Ga0066388_1006238641	3300005332	Tropical Forest Soil	MKRFLISSLSVLAVIVGTQAANAQADINPNLYPPYRGVPAAQQPWEWYAGPGPMRRGNQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHPRQSVYR*
Ga0066388_1008265792	3300005332	Tropical Forest Soil	MKRALIGSLSVLAMMVGTQAANAQADINPNIYPTYRGAPVAQQPWEWYAGPGPVRRGSQCVVDVDSGRGYGFMKDCPAPQAAAHPRARVAQRHARRSVYR*
Ga0066388_1010002081	3300005332	Tropical Forest Soil	MKRALIVASVGILASTVWAASANAQADINPNIYPTYRGAPVAQQPWEWYASVGPVRRDNQCVVDVDINRGYGFMKDCPAPQAAAAPRPSRVAHRYHHKVVQR*
Ga0066388_1016597751	3300005332	Tropical Forest Soil	IGSLSVLAMIAGTAAAYAQADINPNLYPTYRGAPVAEQPYEWFATPGPVRRGGMCAVDVDSGRGYGYMKPCPAPQASATPRRVAHRSHRKTVVR*
Ga0066388_1047046481	3300005332	Tropical Forest Soil	MKHAFIGSLSVLAMIAGTAPAYAQADINPNIYPSYRGAAVAQQPSEWFATPGPVRRGNMCTVDVDAGRGYGYMKPCPAPQASAAPRVAHRAHRKTVVR*
Ga0066388_1051233732	3300005332	Tropical Forest Soil	MKRVMIGSLSVLAMMVGTQAANAQADINPNMYPTYRGAPVAQQPWEWYAGPGPVRRGGQCVVDVGSGRGYGFMKDCPAPQAAAGTRSRVAHRHPRKTVYR*
Ga0008090_100280581	3300005363	Tropical Rainforest Soil	KIMKHALIGSLSVLAMIAGTAAAYAQADINPNIYPSYRGAAVAQQPSEWYATPGPVRRGNMCTVDVDAGRGYGYMKPCPAPQAAPRVAHRAHRKTVVR*
Ga0070713_1000321336	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MMTRIARFTLVVQWEKIMKRALIGSLSFLAVIVATQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDC
Ga0070713_1007901681	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKRALIGSLSFLAVMVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQ
Ga0070710_100136002	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKRALIGSLSFLAVIVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHPRQSVYR*
Ga0070662_1015250531	3300005457	Corn Rhizosphere	MMTRIARFTLVVQWEKIMKRALIGSLSFLAVIVATQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQGQAAAAPRRPRTAHR
Ga0070706_1008034671	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKHALIGGLSVLAMIVGIEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPMRRGSQCAVDVDAGRGYGYMKDCPAPQASAPRQSRTRVAHRHHRTVVTR*
Ga0070707_1021404151	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKHALIVASVGILASTFGVVSANAQADINPNIYPPYRGAPVAQQPWEWYASVGPVRRGNQCVADVDINRGYSYMKDCPAPQASAAPRQSRVAHRYH
Ga0070699_10000157422	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKHALIVASVGILASTFGVVSANAQADINPNIYPPYRGAPVAQQPWEWYASVGPVRRGNQCVADVDINRGYSYMKDCPAPQASAAPRQSRVAHRYHHKVVQR*
Ga0070696_1003718332	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MMTRIACFTLVVQWEKIMKRALIGSLSFLAVIVATQAANAQADINPNLYPPYRGAPAAQQLWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRQSVYR*
Ga0070704_1013801091	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MMTRIARFTLVVQWEKIMKRALIGSLSFLAVIVATQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHPRQSVYR*
Ga0066699_101198303	3300005561	Soil	MKRALIGSSSVLTMMVGTQAANAQADINPNIYPTYRGAPVAQQPWEWYAGPGPVRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRVRVAHRHARQSVYR*
Ga0066702_104869483	3300005575	Soil	MKRALIGSLSVLTMMVGTQAANAQADINPNIYPTYRGAPVAQQPWEWYAGPGPVRRGSQCVVDVDSGRGYGFMKDCPAPQGQAAAAPRRPRTAHRSHRKSSS*
Ga0066905_1005218862	3300005713	Tropical Forest Soil	MKHALIVASVGILASTFGVASANAQADINPNIYPPYRGAPVAQQPWEWYASVGPVRRGNQCVVDVDVNRGYGFMKDCPAPQASAAPRQPRVAHRYHRKVVQR*
Ga0066905_1020584322	3300005713	Tropical Forest Soil	MKRALIVASVGILASTVWGVSANAQADINPNIYPTYRGAPVAQQPWEWYASVGPVRRGNQCMVDVDINRGYGFMKDCPAPQAAAAPRPSRVAHRYHHKVVQR*
Ga0066903_1003289732	3300005764	Tropical Forest Soil	MKRALIGSLSVLAMMVGTQAANAQADINPNIYPTYRGATVAQQPWEWYAGPGPVRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHARQSVYR*
Ga0081540_10176462	3300005983	Tabebuia Heterophylla Rhizosphere	MKRALIGSLSVLAMMVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRSRVAQRHPRKTVYR*
Ga0070717_102620541	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	PMMTRIACFTLVVQWEKIMKRALIGSLSFLAVIVATQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHPRQSVYR*
Ga0070717_103852743	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MMTRIARFTLVVQWEKIMKRALIGSLSFLAVIVATQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRQSVYR*
Ga0075417_103988981	3300006049	Populus Rhizosphere	MNRALIAIASMGILAPTAWVVPANAQADINPNIYPPYRGAPVAQQPWEWFAGPGPVRRGGQCVADVDTNRGYGFMKDCPAPQAAAPPRSALRVAHRHHRKVVHR*
Ga0075364_106916232	3300006051	Populus Endosphere	MKRALVGSLSVLAMMVGTQAANAQADINPNLYPMYRGAPVAQQQPWEWYAGPGPVRRGSQCVVDVDSGRGYGFMKDCPAPQAEARPRARVAHRHPRQSVYR*
Ga0070715_107183411	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKRALIGSLSFLAVIVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPR
Ga0075018_101434251	3300006172	Watersheds	MKHALIGGLSVLATIVGIEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPMRRGNQCAVDVDAGRGYGYMKDCPAPQASAPQQSRTRVAHRHHRTVVTR*
Ga0070712_1012929271	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKRALIGSLSFLAVMVGTQAANAQADINPNLYPPYRGAPAAQQLWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRQSVYR*
Ga0066659_103018843	3300006797	Soil	MKCALIGSLSVLAIIVGTEAANAQADINPNIYPPYRGAPVAQQPWEWYSTPGPVRRGTQCVADVDPGRGYGFMKDCPTPQASAAPRTSRVAHRYHRKSVYR*
Ga0075421_1000510937	3300006845	Populus Rhizosphere	MNRALIAIASMGILAPTAWVVPANAQADINPNIYPPYRGAPVAQQPWEWFAGPGPVRRGGQCVAEVDTNRGYGFMKDCPAPQAAAPPRSALRVAHRHHRKVVHR*
Ga0075421_1014356093	3300006845	Populus Rhizosphere	MKRALIGSLSFLAVIVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHP
Ga0075431_1014547031	3300006847	Populus Rhizosphere	MKRALIGSLSFLAVIVGTQAANAQAAINPKLYPPYRGAPAAQQPWEWYAGPGPMRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHPRQSVYR*
Ga0075433_109130051	3300006852	Populus Rhizosphere	MMTRIACFTLVVQWEKIMKRALIGSLSFLAVIVATQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHPRQSVYR*
Ga0075425_1018899631	3300006854	Populus Rhizosphere	MKRALIGSLSFLAVMVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRQSVYR*
Ga0075424_1004629371	3300006904	Populus Rhizosphere	MKRALAGSLSVLAVMVGTQAANAQADMNPNLYPMYRGAPVAQQQPWEWYAGPGPVRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHARQSVYR*
Ga0075424_1006137863	3300006904	Populus Rhizosphere	MKRALIGSLSFLAVIVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRQSVYR*
Ga0099791_104819701	3300007255	Vadose Zone Soil	MKHALIGGLSVLAMIVGIEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPMRRGSRCAVDVDAGRGYGYMKDCPAPQASAPRQSRTRVAHRHHRTVVTR*
Ga0099793_100214672	3300007258	Vadose Zone Soil	MSCPKEKIMKHALIGGLSVLATIVGIEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPIRRGSRCAVDVDAGRGYGYIKDCPAPQASAPQQSRTRVAHRHHRTVVTR*
Ga0066710_1004116502	3300009012	Grasslands Soil	MKCALIGSLSVLAIIVGTEAANAQADINPNIYPPYRGAPVAQQPWEWYSTPGPVRRGTQCVADVDPGRGYGFMKDCPTPQASAAPRTSRVAHRYHRKSVYR
Ga0099792_105767421	3300009143	Vadose Zone Soil	MKHALIGGLSVLATIVGIEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPMRRGSRCAVDVDAGRGYGYMKDCPAPQASAPRQSRTRVAHRHHRTVVTR*
Ga0111538_139345251	3300009156	Populus Rhizosphere	MNRALIAIASMGILAPTAWVVPANAQAEINPNIYPPYRGAPVAQQPWEWFAGPGPVRRGGQCVADVDTNRGYGFMKDCPAPQAAAPPRSALRVAHRHHRKVVHR*
Ga0075423_119192183	3300009162	Populus Rhizosphere	MMTRIACFTLVVQWEKIMKRALIGSLSFLAVIVATQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRQSVYR*
Ga0126374_100432216	3300009792	Tropical Forest Soil	MKHALIGSLSVLAMIIGIEAANAQAEINPNLYPTYRGAPVAEQPWEWYSTPGPVRRGGQCVADVDPGRGYGYMKDCPAPRASAPQQSRTRVAHRPHRTVVTR*
Ga0126380_101557491	3300010043	Tropical Forest Soil	MKRALIVASVGILASTVWAVSANAQADINPNIYPTYRGAPVAQQPWEWYASVGPVRRGKQCVVDVDINRGYGFMKDCPAPQAAAAPRPSRVAHRYHHKVVQR*
Ga0126382_104535743	3300010047	Tropical Forest Soil	MKRALIVASVGILASTVWAASANAQADINPNIYPTYRGAPVAQQPWEWYASVGPVRRGNQCMVDVDINRGYGFMKDCPAPQAAAAPRPSRVAHRYHHKVVQR*
Ga0126376_117908241	3300010359	Tropical Forest Soil	MKRALIVASVGILASTVWAASANAQADINPNIYPTYRGAPVAQQPWEWYASVGPVRRGKQCVVDVDINRGYGFMKDCPAPQAAAAPRPSRVAHRYHHKVVQR*
Ga0126377_104186853	3300010362	Tropical Forest Soil	MKRALIVASVGILASTVWAVSANAQADINPNIYPTYRGAPVAQQPWEWYASVGPVRRGNQCVVDVDINRGYGFMKDCPAPQAAAAPRPSRVAHRYHHKVVQR*
Ga0126377_120070151	3300010362	Tropical Forest Soil	MKHALIGSLSVLAMIAGIEAASAQAEINPNLYPTYRDAPVAQQPSEWYATPGPVRRGNMCAVDVDAGRGYGYMKPCPAPQAS
Ga0126379_101700253	3300010366	Tropical Forest Soil	VGILASTFGVASANAQADINPNIYPPYRGAPVAQQPWEWYASVGPVRRGNQCVVDVDVNRGYGFMKDCPAPQASAAPRQPRVAHRYHRKVVQR*
Ga0126379_106041232	3300010366	Tropical Forest Soil	MIWNVYLKRVSLRASYALSNGRKIMKRALIGSLSVLAMMVGTQAANAQADINPNIYPTYRGAPVAQQPWEWYAGPGPVRRGSQCVVDVDSGRGYGFMKDCPAPQAAAHPRARVAQRHARRSVYR*
Ga0134125_102879762	3300010371	Terrestrial Soil	MKRALIGSLSFLAVMVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHPRQSVYR*
Ga0105239_104257593	3300010375	Corn Rhizosphere	MMTRIARFTLVVQWEKIMKRALIGSLSFLAVIVATQAANAQADINPNLYPPYRGAPAAQQLWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRQSVYR*
Ga0126383_105792331	3300010398	Tropical Forest Soil	LIGSLSVLAMMVGTQAANAQADINPNIYPTYRGAPVAQQPWEWYAGPGPVRRGSQCVVDVDSGRGYGFMKDCPAPQAAAHPRARVAQRHARRSVYR*
Ga0126383_108014842	3300010398	Tropical Forest Soil	MKRALIVASVGILASTVWAVSANAQADINPNIYPTYRGAPVAQQPWEWYASVGPVRRGNQCVVDVDINRGYGFMKDCPAPQAAAAPRP
Ga0126383_112017801	3300010398	Tropical Forest Soil	HALIGSLSVLAMIAGTAAAYAQADINPNIYPTYRGAPVAQQPSEWYATPGPVRRGNMCAVDVDAGRGYGYMKPCPAPQAAPRVAHRAHRKTVVR*
Ga0137392_104669162	3300011269	Vadose Zone Soil	MKHALIGGLSVLATIVGIEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPMRRGSQCAVDVDAGRGYGYMKDCPAPQASAPRQSRRRGDH
Ga0137393_109482102	3300011271	Vadose Zone Soil	CPKEKIMKHALIGGLSVLATIVGIEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPMRRGSQCAVDVDAGRGYGYMKDCPAPQASAPRQSRTRVAHRHHRTVVTR*
Ga0137364_104187711	3300012198	Vadose Zone Soil	MKRALIGSLSVLTMMVGTQAANAQADINPNIYPTYRGAPVAQQPWEWYAGPGPVRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHCHARQSVY
Ga0137364_106142351	3300012198	Vadose Zone Soil	MKRFLISSLSGLAVIVGTQAANAQADINPNLYPSNRGAAAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQA
Ga0137383_108122792	3300012199	Vadose Zone Soil	MKHALIVASVGILASTFGVVSANAQADINPNIYPPYRGAPVAQQPWEWYASVGPVRRGNQCVADVDINRGYGYMKDCPAPQASAAP
Ga0137382_100590411	3300012200	Vadose Zone Soil	MKRFLISSLSVLAVIVGTQAANAQADINPNLYPPNRGAAAAQQPWEWYAGPGPARRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRKSVYR*
Ga0137363_100296462	3300012202	Vadose Zone Soil	MSCPKEKIMKHALIGGLSVLAMIVGIEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPMRRGSRCAVDVDAGRGYGYMKDCPAPQASAPRQSRTRVAHRHHRTVVTR*
Ga0137363_104728932	3300012202	Vadose Zone Soil	MKHALIVASVGILASTFGVVSANAQADINPNIYPTSRGAPVAQQPWEWHAGPGPVRRGGRCVADVDVNRGYGYMKDCPAPQAAAAPRQSRVAHRYHHKVVQR*
Ga0137362_105898032	3300012205	Vadose Zone Soil	VGILASTFGVVSANAQADINPNIYPPYRGAPVAQQPWEWYASVGPVRRGNQCVAGVDITRRYGYMKDCPAPQASAAPRHSRVAHRYHRKVV
Ga0137362_108514161	3300012205	Vadose Zone Soil	MKHALIVASVGILASTFGVVSANAQADINPNIYPTSRGAPVAQQPWEWHAGPGPVRRGGRCVADVDINRGYGYMKDCPAPQAAAAPRQSRVAHRYHHKVVQR*
Ga0137376_101381873	3300012208	Vadose Zone Soil	MKRFLISSLSVLAVIVGTQAANAQADINPNLYPPNRGAAAAQQPWEWYAGPGPARRGNQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRKSVYR*
Ga0137361_104884221	3300012362	Vadose Zone Soil	MKHALIVASVGILASTFGVVSANAQADINPNIYPPYRGAPVAQQPWEWYASVGPVRRGNQCVADVDINRGYGYMKDCPAPQASAAPRQSRVAHRYHPKGQ*
Ga0137361_113595912	3300012362	Vadose Zone Soil	MKHALIVASVGILASTFGVVSANAQADINPNIYPTSRGAPVAQQPWEWHAGPGPVRRGGRCVADVDVNRGYGYMKDCPAPQAAA
Ga0137390_106871561	3300012363	Vadose Zone Soil	MSCPKEKIMKHALIGGLSVLATIVGIEAANAQADINPNLYPVYRGAPVAEQPWEWHAAPGPMRRGNQCAVDVDAGRGYGYMKDCPAPQASAPRQSRTRVAHRHHRTVVTR*
Ga0150984_1052059242	3300012469	Avena Fatua Rhizosphere	SLSVLAVIVGTQAANAQADINPNLYPPNRGAAAAQQPWEWYAGPGPARRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRKSVYR*
Ga0137358_106577742	3300012582	Vadose Zone Soil	MKRALNGSLSFLAVIVGTQAANAQADINPNIYPPYRGAPVAQQPYEWYAGPGPVRRGNQCVVDVDSGRGYGFTKDCEAPQAAARPRSRVAQRHPRKTVYR*
Ga0137395_100716414	3300012917	Vadose Zone Soil	MSCPKEKIMKHALIGGLSVLAMIVGIEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPMRRGSQCAVDVDAGRGYGYMKDCPAPQASAPRQSRTRVAHRHHRTVVTR*
Ga0137359_1000230014	3300012923	Vadose Zone Soil	IEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPMRRGSRCAVDVDAGRGYGYMKDCPAPQASAPRQSRTRVAHRHHRTVVTR*
Ga0137359_100685167	3300012923	Vadose Zone Soil	IEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPMRRGNQCAVDVDAGRGYGYMKDCPAPQASAPQQSRTRVAHRHHRTVVTR*
Ga0164300_111043571	3300012951	Soil	MKRALIGSLSFLAVIVGTQVANAQADINPNVYPPYRGAPAAQQPWEWYAGPGPMRRGSQCVVDVDSGRGYGFMKDCPAPQATARPRTRVAHRHPRQSVYR*
Ga0164303_101717511	3300012957	Soil	MKRALIGSLSFLAVMVGTPAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQGQAATAPRRRTAHRY
Ga0164302_101725071	3300012961	Soil	MKRALIGSLSFLAVIVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRQSVYR*
Ga0126369_100081978	3300012971	Tropical Forest Soil	MKHALIGSLSVLAMIIGIEAANAQAEINPNLYPTYRGAPVAEQPWEWYSTPGPVRRGGPCVADVDPGRGYGYMKDCPAPRASAPQQSRTRVAHRPHRTVVTR*
Ga0126369_102577633	3300012971	Tropical Forest Soil	MKHALIGSLSVLATIAGTAAAYAQADINPNIYPSYRGAAVAQQPSEWYATPGPVRRGNMCTVDVDAGRGYGYMKPCPAPQASAAPRVAHRAHRKTVVR*
Ga0164308_104173981	3300012985	Soil	MKRALIGSLSFLAVMVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRQS
Ga0164304_100497794	3300012986	Soil	MKRALIGSLSFLAVMVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHPRQSVYR*
Ga0164305_100188862	3300012989	Soil	MKRALIGSLSFLAVMIGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRQSVYR*
Ga0163162_106774441	3300013306	Switchgrass Rhizosphere	MKRALIGSLSFLAVMVGTQAANAQADINPNLYPPYRGAPAAQQLWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHPRQSVYR*
Ga0132258_100546182	3300015371	Arabidopsis Rhizosphere	MGEKIMKRALAGSLSVLAVMVGTQAANAQADMNPNLYPMYRGAPVAQQQPWEWYAGPGPVRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHARQSVYR*
Ga0066655_110922042	3300018431	Grasslands Soil	MKRALIGSLSVLAMMVGTQAANAQADINPNIYPTYRGAPVAQQPWEWYASVGPVRRGNQCVADVDINRGYGYMKDCPAPQASAAPRHSRVAHRYHRKVVQR
Ga0066669_103248481	3300018482	Grasslands Soil	MKRALIGSLSVLTMMVGTQAANAQADINPNIYPTYRGAPVAQQPWEWYAGPGPVRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRVRVAHRHARQSVYR
Ga0210406_100888162	3300021168	Soil	MKRALIGSLSFLAVMVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRQSVYR
Ga0210406_101975253	3300021168	Soil	MKRALIGSLSFLAVIVGTQVANAQADINPNVYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHPRQSVYR
Ga0210402_100820014	3300021478	Soil	LIASLSFLAVIVGTQVANAQADINPNVYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHPRQSVYR
Ga0126371_102294232	3300021560	Tropical Forest Soil	MKRALIGSLSVLAMMVGTQAANAQADINPNIYPTYRGAPVAQQPWEWYAGPGPVRRGSQCVVDVDSGRGYGFMKDCPAPQAAAHPRARVAQRHARRSVYR
Ga0126371_104374703	3300021560	Tropical Forest Soil	MKHALIGSLSVLAMIAGTAAAYAQADINPNIYPTYRGAPVAQQPSEWYATPGPVRRGNMCAVDVDAGRGYGYMKPCPAPQTAPRVAHRSHRKTVVR
Ga0242658_10922121	3300022530	Soil	IMKRALIGSLSFLAVMVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRQSVYR
Ga0179589_101718032	3300024288	Vadose Zone Soil	GTQAANAQADINPNIYPPYRGAPVAQQPYEWYAGPGPVRRGNQCVVDVDSGRGYGFMKDCEAPQAAARPRSRVAQRHPRKTVYR
Ga0207692_100018289	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	IARFTLVVQWEKIMKRALIGSLSFLAVIVATQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRTRVAHRHPRQSVYR
Ga0207699_104039523	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MMTRIACFTLVVQWEKIMKRALIGSLSFLAVIVATQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARP
Ga0207646_109255152	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKHALIVASVGILASTFGVVSANAQADINPNIYPPYRGAPVAQQPWEWYASVGPVRRGNQCVADVDINRGYSYMKDCPAPQASAAPRQSRVAHRYHHKVVQR
Ga0207665_100898571	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MMTRIARFTLVVQWEKIMKRALIGSLSFLAVIVATQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHPRQSVYR
Ga0209240_10086936	3300026304	Grasslands Soil	MKHALIGGLSVLATIVGIEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPMRRGSQCAVDVDAGRGYGYMKDCPAPQASAPRQSRTRVAHRHHRTVVTR
Ga0209131_10469002	3300026320	Grasslands Soil	MKHALIGGLSVLATIVGIEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPMRRGSRCAVDVDAGRGYGYMKDCPAPQASAPRQSRTRVAHRHHRTVVTR
Ga0209805_11821433	3300026542	Soil	MKRALIGSLSVLTMMVGTQAANAQADINPNIYPTYRGAPVAQQPWEWYAGPGPVRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHARQSVYR
Ga0209577_101226274	3300026552	Soil	MKRALIGSSSVLTMMVGTQAANAQADINPNIYPTYRGAPVAQQPWEWYAGPGPVRRGSQCVVDVDSGRGYGFMKDCPAPQAAARPRVRVAHRHARQSVYR
Ga0179587_105251241	3300026557	Vadose Zone Soil	MKHALIGGLSVLATIVGIEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPMRRGSQCAVDVDAGRGYGYMKDCPAPQASAP
Ga0209488_101686484	3300027903	Vadose Zone Soil	MKHALIGGLSVLAMIVGIEAANAQADINPNLYPVYRGAPVAEQPWEWHATPGPIRRGSRCAVDVDAGRGYGYIKDCPAPQASAPQQSRTRVAHRHHRTVVTR
Ga0209382_103315124	3300027909	Populus Rhizosphere	MNRALIAIASMGILAPTAWVVPANAQADINPNIYPPYRGAPVAQQPWEWFAGPGPVRRGGQCVAEVDTNRGYGFMKDCPAPQAAAPPRSALRVAHRHHRKVVHR
Ga0307278_101870352	3300028878	Soil	MKRALIVASVGILASTVWVVSANAQADINPNIYPPYRGAPVAQQPWEWYASVGPVRRGTQCVVDVDVNRGYGFMKDCPAPQASAAPRQSRVAHRYHRKVVQR
Ga0307277_100205903	3300028881	Soil	MKRALIGSLSFLAVIVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGSQCVVDVDSGRGYGFMKDCPAPQAAARSRSQVAHRHPRKTVYR
Ga0318541_108103611	3300031545	Soil	ACNVYLITAPYCVLSPLSSERRKIMKHALIGSLSVLAMIAGTAAANAQANINPNIYPTYRGAPVAQQPSEWYATPGPVRRGNMCAVDVDAGRGYGYMKPCPAPQAAPRVAHRAHRKTVVR
Ga0310915_104180451	3300031573	Soil	MKHALIGSLSVLAMIAGTAAANAQANINPNIYPTYRGAPVAQQPSEWYATPGPVRRGNMCAVDVDAGRGYGYMKPCPAPQAAPRVAHRAHRKTVVR
Ga0318492_105702141	3300031748	Soil	IAWNVYLITAPYCVLSPLSSERRKIMKHALIGSLSVLAMIAGTAAANAQANINPNIYPTYRGAPVAQQPSEWYATPGPVRRGNMCAVDVDAGRGYGYMKPCPAPQAAPRVAHRAHRKTVV
Ga0318557_105071721	3300031795	Soil	MKHALIGSLSVLAMIAGTAAANAQANINPNIYPTYRGAPVAQQPSEWYATPGPVRRGNMCAVDVDAGRGYGYMKPCPAPQAAPRVAHR
Ga0306925_108808211	3300031890	Soil	KIMKHALIGSLSVLAMIAGTAAANAQANINPNIYPTYRGAPVAQQPSEWYATPGPVRRGNMCAVDVDAGRGYGYMKPCPAPQAAPRVAHRAHRKTVVR
Ga0318570_105546091	3300032054	Soil	WNVYLITAPYCVLSPLSSERRKIMKHALIGSLSVLAMIAGTAAANAQANINPNIYPTYRGAPVAQQPSEWYATPGPVRRGNMCAVDVDAGRGYGYMKPCPAPQAAPRVAHRAHRKTVVR
Ga0318533_100391728	3300032059	Soil	GSLSVLAMIAGTAAANAQANINPNIYPTYRGAPVAQQPSEWYATPGPVRRGNMCAVDVDAGRGYGYMKPCPAPQAAPRVAHRAHRKTVVR
Ga0307470_104610991	3300032174	Hardwood Forest Soil	MKRALIGSLSFLAVMVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAAQPRTRVAHRHPRQSVYR
Ga0307471_1000519057	3300032180	Hardwood Forest Soil	MKRALIGSLSFLAVMVGTQAANAQADINPNLYPPYRGAPAAQQPWEWYAGPGPMRRGGQCVVDVDSGRGYGFMKDCPAPQAAARPRARVAHRHPRQSVYR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062204

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences