Metagenome / Metatranscriptome Family F062281

Basic Information
Family ID	F062281
Family Type	Metagenome / Metatranscriptome
Number of Sequences	131
Average Sequence Length	82 residues
Representative Sequence	PALLMTLRESKMILVGFDRASIPMHAGELTREGLGHAGVILFRRSMSAIAYGRQARLLVDLWREAEDWDWADRIEYLPRP
Number of Associated Samples	118
Number of Associated Scaffolds	131

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.76 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Unclassified (99.237 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (6.870 % of family members)
Environment Ontology (ENVO)	Unclassified (22.901 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (29.771 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.56% β-sheet: 9.26% Coil/Unstructured: 60.19%
Feature Viewer

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Pfam ID	Name	% Frequency in 131 Family Scaffolds
PF10590	PNP_phzG_C	2.29
PF00425	Chorismate_bind	1.53
PF00872	Transposase_mut	1.53
PF00749	tRNA-synt_1c	1.53
PF01259	SAICAR_synt	1.53
PF01425	Amidase	1.53
PF01925	TauE	0.76
PF00106	adh_short	0.76
PF13088	BNR_2	0.76
PF00891	Methyltransf_2	0.76
PF02604	PhdYeFM_antitox	0.76
PF14366	DUF4410	0.76
PF01436	NHL	0.76
PF14606	Lipase_GDSL_3	0.76
PF13635	DUF4143	0.76
PF14509	GH97_C	0.76
PF05015	HigB-like_toxin	0.76
PF11138	DUF2911	0.76
PF03054	tRNA_Me_trans	0.76
PF00889	EF_TS	0.76
PF00334	NDK	0.76
PF01339	CheB_methylest	0.76
PF00117	GATase	0.76
PF00665	rve	0.76
PF14559	TPR_19	0.76
PF09335	SNARE_assoc	0.76
PF08029	HisG_C	0.76
PF01048	PNP_UDP_1	0.76
PF01467	CTP_transf_like	0.76
PF00342	PGI	0.76
PF01408	GFO_IDH_MocA	0.76
PF13541	ChlI	0.76
PF12951	PATR	0.76
PF13264	DUF4055	0.76
PF13560	HTH_31	0.76
PF05336	rhaM	0.76
PF06230	LpxI_C	0.76
PF13424	TPR_12	0.76
PF02447	GntP_permease	0.76
PF02687	FtsX	0.76
PF11867	DUF3387	0.76
PF02416	TatA_B_E	0.76
PF07927	HicA_toxin	0.76
PF00474	SSF	0.76
PF13419	HAD_2	0.76
PF13495	Phage_int_SAM_4	0.76
PF01791	DeoC	0.76
PF02581	TMP-TENI	0.76

COG ID	Name	Functional Category	% Frequency in 131 Family Scaffolds
COG0152	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Nucleotide transport and metabolism [F]	1.53
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.53
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	1.53
COG2610	H+/gluconate symporter GntT or related permease, GntP/DsdX family	Carbohydrate transport and metabolism [G]	1.53
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	1.53
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.53
COG0105	Nucleoside diphosphate kinase	Nucleotide transport and metabolism [F]	0.76
COG0166	Glucose-6-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.76
COG0264	Translation elongation factor EF-Ts	Translation, ribosomal structure and biogenesis [J]	0.76
COG0352	Thiamine monophosphate synthase	Coenzyme transport and metabolism [H]	0.76
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.76
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.76
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.76
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.76
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.76
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.76
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.76
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.76
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.76
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.76
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.76
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.76
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.76
COG3254	L-rhamnose mutarotase	Cell wall/membrane/envelope biogenesis [M]	0.76
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.76
COG3494	Uncharacterized conserved protein, DUF1009 family	Function unknown [S]	0.76
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.76
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.76
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.76
COG0040	ATP phosphoribosyltransferase	Amino acid transport and metabolism [E]	0.76

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.24 %
All Organisms	root	All Organisms	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.24 %
cellular organisms	root	All Organisms → cellular organisms	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.24 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.76 %

Scaffold	Taxonomy	Length	IMG/M Link
3300001385\|JGI20193J14888_1002359	All Organisms → cellular organisms → Bacteria	4903	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.97%
Host-Associated	Host-Associated	13.74%
Engineered	Engineered	2.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.44%
Aquatic	Environmental → Aquatic	30.53%
Plants	Host-Associated → Plants	13.74%
Wastewater	Engineered → Wastewater	1.53%
Solid Waste	Engineered → Solid Waste	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	36.64%
Freshwater	Environmental → Aquatic → Freshwater	24.43%
Peat	Environmental → Terrestrial → Peat	16.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.45%
Marine	Environmental → Aquatic → Marine	4.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.29%
Sediment	Environmental → Aquatic → Sediment	1.53%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	1.53%
Grass	Engineered → Solid Waste → Grass	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	16.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.92%
Lake	Environmental → Aquatic → Freshwater → Lake	9.16%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.87%
Loam	Environmental → Terrestrial → Soil → Loam	4.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.58%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.29%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.29%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.53%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	1.53%
Ice	Environmental → Aquatic → Freshwater → Ice	0.76%
Coastal	Environmental → Aquatic → Marine → Coastal	0.76%
Composting	Engineered → Solid Waste → Grass → Composting	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	16.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.45%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	9.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.16%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.58%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	3.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.05%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.29%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.53%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.53%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	1.53%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.76%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.76%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.76%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.76%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.87%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.34%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	5.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	4.58%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.82%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.82%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	3.05%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.29%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.29%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.53%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.53%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.53%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.53%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.53%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.53%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.53%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.53%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	1.53%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.76%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.76%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.76%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.76%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.76%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.76%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.76%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2006207004	Sediment methylotrophic communities from Lake Washington - Formate enrichment	Environmental	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300001177	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001385	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004124	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (version 2)	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005982	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 8/11/14 A brown DNA	Engineered	Open in IMG/M
3300005989	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 7/17/14 B DNA	Engineered	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009504	Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012693	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES075 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012694	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES054 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012695	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES081 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013092	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m	Environmental	Open in IMG/M
3300013094	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021074	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-17m	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025162	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG (SPAdes)	Environmental	Open in IMG/M
3300025316	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG (SPAdes)	Environmental	Open in IMG/M
3300025648	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027878	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05 (SPAdes)	Environmental	Open in IMG/M
3300028552	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LWFOR_40294	2006207004	Sediment	MSKDLVLLQVLREHTLILVGFDRRTMAMHAGDLTKAGAGHTGVILYRRNVAQMDYGKQARLLVEFWKAAQYRDWNDLIIYLPGGTEASA
4ZMR_05372240	2170459017	Switchgrass, Maize And Mischanthus Litter	RASIPMHAATLTREANGHAGVILFRRSVPMTAYGRQARLLVNFWQAAAAWDWADRIEYLPRPDKIGDYETAA
JGI12634J13548_10051652	3300001177	Forest Soil	SDWEDGAYLSVKDPALLMALRESEMVLVSFDRASIPMHAGDLTRVGLGHGGVILFRRSVSPIAYGVQARLLLDFWEYAASKDWADRVEYLPRDPLALPA*
JGIcombinedJ13530_1015277972	3300001213	Wetland	LVGFDRASLPMHAGELTREGLGHAGAILFRRSVSAVAYGRQARLLVDLWREGADWDWADRIEYLPRP*
JGIcombinedJ13530_1032527122	3300001213	Wetland	LITFDRRTMAMHAGQMTRGGGGHTGVILFRRSVSQMDYGKQSRLVIEFWAEARGWDWSDRIEYLPRT*
JGIcombinedJ13530_1033595272	3300001213	Wetland	LEALRQPGMILVTFDRRTMAMHAGQLTRSGGGHSGVILFRRNVSPMDYGKQSRLIVAFWKEARDWDWSDRLEYLPRG*
JGI12269J14319_100348863	3300001356	Peatlands Soil	PWLMALRESGTILVGFDRASLPMQASQLTREGLGHAGVILFRRSVSAVAYGKQARLLVSFWREAGDWDWADRIEYLPRP*
JGI20193J14888_10023597	3300001385	Arctic Peat Soil	PALLMTLRESKMILVGFDRASIPMHAGELTREGLGHAGVILFRRSMSAIAYGRQARLLVDLWREAEDWDWADRIEYLPRP*
C688J18823_104963401	3300001686	Soil	SWVAIWKRSFKDPVLLKTLRAHSLILAGFDRRTMAMHAGELTRARNGHSGMILFKRAASQADYGKQSQLLLGFWXEAADWDWADRIEYLPR*
JGI20214J51088_108177431	3300003432	Wetland	CLQLKDPALLMTLRDEDLILVSFDRSSLAHHAGVLTREGVGHSGVILFRRTVSHIAYGVQARLLVDFWQEASEWDWADLVVYLPRL*
Ga0066178_102649991	3300004124	Freshwater Lake	YLSVKDPALLMTLREHEMILVGFDRASMPLHAGTLTREGLGHAGVLLFRRSVLTTAYGKQARLLVNLWEEAKDWDWADRIEYLPRS*
Ga0066671_101509023	3300005184	Soil	MIHIADWKDGAFLSVKDPPLLMALREADLILVGFDRASLPMHAGALTREGLGHGGVILFRRSVSVVAFGKQARLLVKFWREAAVWNWADRIEYLPRT*
Ga0070670_1020581651	3300005331	Switchgrass Rhizosphere	WLNGKYRVAKDPALLSVLHEHGLILVSFDRRSMALHAAELTRGGSGHAGVILFRRNVSQLDYGKPSRLLVEFWRQARDWDWSDRIEYLPKS*
Ga0070661_1013379292	3300005344	Corn Rhizosphere	REHKMVLVTFDRRTMTMHAGELTRSGGGHAGVILFRRSVSQMDYGKQSRLVVEFWKEARVWDWSDRIEYLPPGL*
Ga0068859_1014016312	3300005617	Switchgrass Rhizosphere	VLYLSVKDPALLMTLREHGMILVGFDRASIPMHAGRLRREGVGHAGVILFRRSVPATAYGKQARVLVSLWRETADWDWADRIEYLPRA*
Ga0066903_1078023582	3300005764	Tropical Forest Soil	EAGLVIVSFDRRTMAMHAGLLTREGAGHAGVILFRRTVSQMDYGKQSRLLVEFWKEAKNWDWTDRIEYLPKPES*
Ga0068862_1005593722	3300005844	Switchgrass Rhizosphere	MTLREHGMILVGFDRASIPMHAGRLTREGLGHAGVILFRRSVPATAYGKEARLLVSLWRETADWDWADRIEYLPRA*
Ga0075156_103427511	3300005982	Wastewater Effluent	VLVGFDRASLPMHAGDLTRVGLGHAGVILFRRSVSVVAYGQQAGLLMGLWREACDWDWADRIEYVPRPNAPDV*
Ga0075154_106055082	3300005989	Wastewater Effluent	IIHISNWKSGAYLAVKDPALLMALREEEMVLVGFDRASLPMHAGDLTRVGLGHAGVILFRRSVSVVAHGQQAGLLMGLWREACDWDWADRIEHVPQPNAPDV*
Ga0070717_105994893	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	WQDGAYLSAKDPALLMTLREQGLVLIGFDRASMAMHAGTLTREGLGHAGIILFRRCVPVLGDGKQARLLVEFWRGAKEWDWSDRITYLPPA*
Ga0075420_1006244911	3300006853	Populus Rhizosphere	HIADWMDGKHRISKDPVLLAALQEHDLIIVSFDRRTMAMHAGELTRAGCGHAGVILFRRSISQVDYGKQARLLVDFWRKAQDWDWADRIEYLPGTNR*
Ga0079217_115439512	3300006876	Agricultural Soil	LPVLRENHLIIVSFDRRTMAMHAGELTRAAGGHAGVILFRRTVSQIDYGKQSRLLIEFWKEAKDWDWSDRIEYLPRS*
Ga0079216_100899223	3300006918	Agricultural Soil	VLRENHLIIVSFDRRTMAMHAGELTRAAGGHAGVILFRRTVSQIDYGKQSRLLIEFWKEAKDWDWSDRIEYLPRS*
Ga0105747_12019672	3300007974	Estuary Water	PIMHISEWENGAYLSVKDPALLMTLREHEMILVGFDRASMPLHAGTLTREGLGHAGVLLFRRSVLTTAYGKQARLLVNLWEEAKDWDWADRIEYLPRP*
Ga0105093_106998532	3300009037	Freshwater Sediment	RLVAGFPLVHISEWQEGAYLSAKDPALLMTLREAGLVLVGFDRASLPMHTGRLTREGLGHAGVILYRRSVSQLDYGKQARLLVEFWRETQKWDWADRIEYLPHV*
Ga0111539_125608521	3300009094	Populus Rhizosphere	PALLAALREHNLIIVSFDRRTMAMHAGALTREGGGHAGVILFRRTISQVAYGKQARLLVDFWREAKDWDWADRIEYLPLSTRTQ*
Ga0066709_1018423731	3300009137	Grasslands Soil	MSKDPVLLPLLRQHGLILVGFDRRTMAMHAGHLTREGQGHAGVILFRRSISQLGYRKQSRLLIEFW
Ga0066709_1044655271	3300009137	Grasslands Soil	LHGQHRMSKDPFLLPLLHQHGLILVGFERRTMAMHAVHLTREGQGHAGVILFRRSISQLNYGKQSRLLVEFWKEAKGLDWADRIEYLPRQ*
Ga0114966_108104081	3300009161	Freshwater Lake	PALLMTLREHEMILVGFDRASMPLHAGTLTREGLGHAGVLLFRRSVLTTAYGKQARLLVNLWEEAKDWDWADRIEYLPRS*
Ga0114951_100819644	3300009502	Freshwater	LREEEMILVGFDRASIPMHAGELTREGLGHAGVILFRRSVPVIAYGKQARLLVDLWREAKDWEWADRIEYLPRP*
Ga0114946_101049812	3300009504	Sediment	VSVGFRRSSLPMHAGHLTREGLGHAGVILYRRSVSQLDYGKQAWLLVEFWREAQKWDWADRIEYLPHG*
Ga0114946_105822031	3300009504	Sediment	VLVGFDRSSLPMHAGHLTREGLGHAGVILYRRSVSQLDYGKQARLLVEFWRGAQKWDWADRIEYLPHG*
Ga0118657_105268692	3300009506	Mangrove Sediment	MGGKHRVSKDPVLLSVLREHGLIIVGFDRRTMAMHAGELTREGTGHAGVILFRRSVAQMDYGKQSRLLVEFWGKAKDWDWADRIEYLPRPRPGD*
Ga0116221_13502062	3300009523	Peatlands Soil	MALREAGLILVGFDRASMPMHAGNLTREGLGHAGIILFRRSVSRAAYGKQAGLLVDFWEEAAGWDWTDRIEYLPSP*
Ga0105237_124190771	3300009545	Corn Rhizosphere	LLMALREWGLVLVGFDRTSMPMHAGKLTREGLGHAGVILLRRTVPRTAYGKQAQLLVNFWGQALEWDWADRIEYLPRP*
Ga0105340_15104091	3300009610	Soil	HRVSKDPVLLPVLREHGLIIVSFDRRTMAMHAGQLTRAAGGHAGVILFRRGVSQMDYGKQSRLLVEFWKQARNWEWADRIEYLP*
Ga0116132_12347212	3300009646	Peatland	LEVLREYGLILISFDRRTMAMHAGQLTRSGGGHAGVILFRRSVSQMDYGKQSRLAVEFWKEAGGWDWADRIEYLPLQRQSGK*
Ga0134088_101551043	3300010304	Grasslands Soil	VKDPALLMTLREHEMVLVSFDRASLPMVAGTLTREGLGHAGVILFRRSVPTTAYGKQARLLVSFWRQAREWDWADRIEYLPGSVSC*
Ga0074045_107168182	3300010341	Bog Forest Soil	LRDHQMVLVGFDRASMPLHAGTLTRQGVGHAGIIVFRRSISAVAYGQQARLLVELMNKANREHWDWADRIEYLP*
Ga0074045_109009501	3300010341	Bog Forest Soil	MHTAMWQGGAYLCAKDPALLMTLREQGIVLVGFDRASLPMHAGDLTRQGLGHAGIILFRRLVPTVAYGKRARLLVEFWREAASWEWADRIEYLPRTLGN*
Ga0137436_10405673	3300011423	Soil	ENGSWLSAKDPALLMTLRERGLILVGFDRASLPMHAGTLTREGVGHAGVILFRRSVPRTAYGKQARLLVNFWNEAEDWDWADRIEYLPRP*
Ga0137363_113623612	3300012202	Vadose Zone Soil	LSVKDPPLLMALRESGLILVSFDRASMPMHAGNLTREGLGHSGVILFRRSVTRLAYGKQARLLVDFWSEAMDRDWADRIEYLPRP*
Ga0137377_102984294	3300012211	Vadose Zone Soil	HIADWLGGKYRMSKDPVLLPVLREHGLIIVGFDRRTMAMHAAELTREGSGHAGVILFRRSVSQMDYGRQSRLLVEFWKHAQRWDWADRLEYLPQQQTATPP*
Ga0137387_102142533	3300012349	Vadose Zone Soil	HIADWLGGKYRMSKDPVLLPVLREHGLIIVGFDRRTMAMHAGELTREGSGHAGVILLRRSVSQMDYGKQSRLLVEFWKHAEHWDWADRIEYLPQQQTDTLP*
Ga0137367_108266442	3300012353	Vadose Zone Soil	FDRRTMAMHAGQLTRAGSGHAGVILFRRTVSQMDYGKQSRLLIEFWEEGKDWDWSDRIEYLPRP*
Ga0137360_103160343	3300012361	Vadose Zone Soil	SVLREHELVIVGFDRRTMAMHAGHLTRAGAGHAGVILFRRSVSQMDYGKQSRLLVEFWEEAKEWDWADRIEYLPRPQV*
Ga0150984_1214632902	3300012469	Avena Fatua Rhizosphere	QALKAENLVVVSCDRRTMAMHAADATRTAGGHAGVILFRRSVSQMDYSKQSRLLVEFWREAREWDWADRIQYLPR*
Ga0157573_11196672	3300012693	Freshwater	MTLREANLVLVGFDRASMAMHAGALTREGLGHAGVILFRRSVPVVAYGKQAKLLVSLWRDAG
Ga0157559_11473892	3300012694	Freshwater	MTLREANLVLVGFDRASMAMHAGALTREGLGHAGVILFRRSVPVVAYGKQAKLLVSLWRDAGGWDWADRIVYLPLEPLAN
Ga0157577_10458102	3300012695	Freshwater	MTLREANLVLVGFDRASMAMHAGALTREGLGHAGVILFRRSVPVVAYGKQAKLLVSLWRDAGGWDWADRIVYLPLEPLANR*
Ga0137395_105886861	3300012917	Vadose Zone Soil	MALRESGLILVSFDRASMPMHAGNLTREGLGHSGVILFRRSVTRLAYAKQARLLVDFWSEEMDRDWADRIEYLPRP*
Ga0137359_103589022	3300012923	Vadose Zone Soil	YLSVKDPPLLMALRESEIVLVGFDRASLPMHAGHLTREGLGHAGVILFRRSVPQIAFGKQARLLVDFWREASDWDWSDRIEYLPRS*
Ga0137416_110081342	3300012927	Vadose Zone Soil	RESGMVLVGFDRASIPMHAGELTREGLGHSGVILFRRSVGSIAYGKQARLLVNFWRTAEDWDWADRIEYLPRP*
Ga0163199_10375641	3300013092	Freshwater	IILVGFDRASLPMHAGQLTREGLGHAGIILFRRTVSAVAYGKQARLLVDLWREAEDWDWADRIEYLPHP*
Ga0164297_101252861	3300013094	Freshwater	MTLREANLVLVGFDRASMAMHAGALTREGLGHAGVILFRRSVPVVAYGKQAKLLVSLWRDAGGWDWAD
Ga0157378_107938802	3300013297	Miscanthus Rhizosphere	MVLVTFDRRTMTMHAGDLTRSGGGHAGVILFRRSVSQMDYGKQSRLVVEFWKEARVWDWSDRIEYLPPGL*
Ga0157378_131773962	3300013297	Miscanthus Rhizosphere	LALLREAGLLIVSFDRRTMAMHAGQLTREGAGHAGVILFRRSVSQMDYGKQSRLLVELWREARDWDWADRIEYLPRTQV*
Ga0181539_11855541	3300014151	Bog	MDGKHRMSKDPVLLAALREPGLLLASFDRRTLAMHAGQLTRGSTGHAGVILFRRSVSQMDYGKQSRLLVEFWREAADWDWADRIE
Ga0181527_12564552	3300014153	Bog	MDGKHRMSKDPVLLAALREPGLVLVSFDRRTLAMHAGQLTRGSTGHAGVILFRRSVSQMDYGKQSRLLVEFWREAADWDWADRIEYLPRQ*
Ga0181538_104965271	3300014162	Bog	ILVGFDRASLPMHAGRLTREGLGHGGVILFRRSVSPVAYGRQARLLVRFWHEAEDWDWADRIEYLPRP*
Ga0181535_107334232	3300014199	Bog	ICDWREGAYLSAKDPALLMTLREAGMVLVGFDRASLPMHAGALTREGLGHAGIILFRRLVPTLAYGRQARLLVELWREAADWDWADRIEYLPRS*
Ga0181526_106102302	3300014200	Bog	ASMPLHAGTHTRQGVGHSGIILSRRSVPAVAYGQQARLLIELMNKANREHWDWADRIEYLP*
Ga0181537_101378811	3300014201	Bog	KDPALLMALRETGMILVSFDRRSIPMHAGALTREGMGHAGIILFRRSVSSVAYGRQARLMLDFWREAMNLDWADRIAYVPHEGPGVRV*
Ga0182018_106185971	3300014489	Palsa	ILVGFDRASIPMHAGELTREALGHAGVILFRRSVAAVAYGKQARLLVGFWREALDWDWADRIEYLPWPSAGAVALLPSIAP*
Ga0182017_102708982	3300014494	Fen	MIHISDWKDGAYLSAKDPALLMALRETETILVGFDRAGLPMHAVRLTREGLGHAGIILFRRSVSSIAYGRQARLLAGFWREALDWNWADRIEYLPNADQCRGSFL*
Ga0182019_108020781	3300014498	Fen	KDPALLMLLRESKMILVSFDRASIPMHAGELTREGLGHAGVILFRRTVSAIAYGKQARLLVDLWREAEEWDWADRIEYLPRP*
Ga0182019_112281431	3300014498	Fen	IVHLSDWKAGAYLSAKDPALLMTLCESGMILVGFDRASLPMHAGELTREGLGHAGIILFRRSVSAVAYGCQARLLVGFWREAADWDWADRIEYLPRP*
Ga0182019_112669712	3300014498	Fen	FLLVHISDWQEGAYLSVKDPALLMTLRESEMILVGFDRASIPMHAGELTREGLGHAGVILFRRSVPAVAYGKQARLLVDLWREAVDWDWADRIEYLPRL*
Ga0182021_131114752	3300014502	Fen	LRESKMILVSFDRASIPMHAGELTREGLGHAGVILFRRTVSAIAYGKQARLLVDLWREAEEWDWADRIEYLPRP*
Ga0187779_110163812	3300017959	Tropical Peatland	MAAGFPMLHIADWMGGAYLSAKDAALLMTLREHGMILVGFDRASMPIHAGRFTREGLGHAGIILFRRSVGLTDYGGQERLLVDFWRVAKRWDWADRIEYL
Ga0181520_109692221	3300017988	Bog	LVGFDRASLPMHAGKLTREGLGHAGVILFRRAVPAIAYGRQARLLVDFWREALDWDWADRIAYLPRS
Ga0187891_10876841	3300017996	Peatland	LVHISDWQDGAYLSVKDPALLMTLRESKMILVGFDRASIPMHAGELTREGLGHAGVILFRRSVSAIAYGRQARLLVNLWREAEDWDWADRIEYLPRP
Ga0187870_12917881	3300017998	Peatland	WKAGAYLSAKDPALLMALRESGMILVGFDRASLPMHAGELTREGLGHAGVILFRRSVSAVAYGRQARLLVGFWREAANWDWADRIEYLPRP
Ga0187885_100807792	3300018025	Peatland	MILVGFDRASIPMHAGELTREGLGHAGVILFRRSVSAIACGRQARLLVDLWREAEDWDWADRIEYLPRP
Ga0187863_106707902	3300018034	Peatland	VLVGFDRASLPMHAGELTREGLGHAGVILFRRSVYAVAYGRQARLLVGFWREAADWDWADRIEYLPQQ
Ga0187851_108539831	3300018046	Peatland	DRASLPMHAGALTREGLGHAGIILFRRLVPTLAYGRQARLLVELWREAADWDWADRIEYLPRS
Ga0066662_104192703	3300018468	Grasslands Soil	LIVVGFDRRTMAMHAGSLTRESGGHAGVILFRRSVSQMDYGKQSRLLVEFWGEARHWDWSDRIEYLPRPE
Ga0182022_12629794	3300019785	Fen	MRRFPLIHLTDWREGAYLSAKDPALLMTLREANLVLVGFDRASMAMHAGALTREGLGHAGVILFRRSVPVVAYGKQAKLLVSLWRDTGSWDWAD
Ga0182025_12062334	3300019786	Permafrost	MILVGFDRASIPMHAGTLTREGVGHAGVILFRRSISTIAYGRQARLLVDLIEEAKNWDWEDRIEYLPRGIG
Ga0182028_11785501	3300019788	Fen	MGVSPLFHIADWQDGAYLSSKDPALLMTLREAGMVLVGFDRASMAKHAGILTREALGHAGVILFRRSVSPMAYGKQATLLVNLWRAGQNWDWADRIVYLPLESIFSA
Ga0137408_13505754	3300019789	Vadose Zone Soil	MAMHAGHLTRAGAGHAGVILFRRSVSQMDYGKQSRSWLSFWEEAKSGLGDRIEISAATTS
Ga0194044_100815312	3300021074	Anoxic Zone Freshwater	QGLILVSFDRRTLAMHAGERTRSGGGHAGVILFRRSVSPMDYGKQSRLVVELWKEAGDWDWSDRIEYLPRA
Ga0210388_113091321	3300021181	Soil	FDRASLPMHAGTLTREGLGHAGIILFRRSVSAIAYGKQARLLVSCWREGGDWDWDWADRIEYLPRA
Ga0210393_110597861	3300021401	Soil	GMILVGFDRASMAMHAGALTREGLGHAGVILFRRSVPVVAYGKQARLLVNFWAKAADWEWADRIEYLPGATSI
Ga0212088_100745292	3300022555	Freshwater Lake Hypolimnion	PIIHISDWQEGAYLSVKDPALLMTLRESEIILVGFDRASLPMHAGELTREGLGHAGVILFRRTVSAVAYGKQARLLVDLWREAEDWDWADRIEYLPRP
Ga0224558_11930782	3300023090	Soil	EAYFPLVHISDWQESAYLSVKDPALLMALHESRIILVGFDRASIPMHAGELTRQGLGHAGVILFRRTVPAVAYGKQARLLVDLWREAENWDWADRIEYLPRP
Ga0209083_13365491	3300025162	Freshwater	STDPLLLEVLREYGLILITFDRRTMAMHAGQLTRSGGGHAGVILFRRSVSQMVYGKQSRLVVEFWKEAGDWDWSDRIEHLPRP
Ga0209697_100659472	3300025316	Freshwater Lake Hypolimnion	KDPALLMALHESGIILAGFDRASIPMHAGELTREGLGHAGVILFRRTVSAVAYGKQARLLVDLWREAEDWDWADRIEYLPRP
Ga0208507_10066142	3300025648	Freshwater	MSVKDPALLMTLREEEMILVGFDRASIPMHAGELTREGLGHAGVILFRRSVPVIAYGKQARLLVDLWREAKDWEWADRIEYLPRP
Ga0209385_10167075	3300025650	Arctic Peat Soil	MALRESEMILISFDRASIPMHAGVLTREGLGHAGVILFRRSVSAIDYGKQARLLIHFWCDAEEWDWADRIEYLPRS
Ga0207674_103269942	3300026116	Corn Rhizosphere	MTLREHGMILVGFDRASIPMHAGRLTREGLGHAGVILFRRSVPATAYGKEARLLVSLWRETADWDWADRIEYLPRA
Ga0209421_10056812	3300027432	Forest Soil	MLVGFPIVHISDWEDGAYLSVKDPALLMALRESEMVLVSFDRASIPMHAGDLTRVGLGHGGVILFRRSVSPIAYGVQARLLLDFWEYAASKDWADRVEYLPRDPLALPA
Ga0209330_11482572	3300027619	Forest Soil	LSVKDPALLMALREAAMILVSFDRASMPMHAGDLTREGLGHAGVILFRRSVASIAYGAQARLLLDFWKDAANED
Ga0209086_100053484	3300027770	Freshwater Lake	MTHISEWQGGAYLSVKDPALLMALHESGIVLAGFDRSSLPMHAGELTRGGLGHAGIILFRRTVSAVAYGRQARLLVDCWREAEDWDWADRIEYLPRP
Ga0209167_104987912	3300027867	Surface Soil	DRASLPMHAGELTRAGLGHAGIILFRRSVPAIAYGRQARLLVDFWRAAEAWDWADRIEYLPGRS
Ga0209181_102255892	3300027878	Freshwater	MYLSVKDPALLMALRESGTILVGFDRASLPMHARASTREGLGHAGVILFRRSVSAVAHGKQARLLVNFWQEAEAWDWADRIEYLPRT
Ga0302149_11744991	3300028552	Bog	MMLREVGLVLVGFDRTSMPMHAGDLTRQGLGHAGVILFRRLVPTVAYGRQARLLVDFWRETVDWEWADRIEYLPRA
Ga0265338_108965351	3300028800	Rhizosphere	ESGMVLVGFDRASIPMHAGVLTREGLGHAGVILIRRSVSAVAHGKQARLLVSFWREAGDWDWADRIEYLPGIPT
Ga0307503_101586011	3300028802	Soil	RRTMAMHGAQLTRSGGGHSGVILFRRSVSQMDYGKQSRLVVEFWKEAKDWDWLDRIEYLPRA
Ga0307503_103400052	3300028802	Soil	MALRESEMVLVGFDRASIPMHAGKLSREGLGHAGVILIRRSVSQIAYGKQARLLVDYWEEAFEWEWGDRIEYLPRC
Ga0311328_103302661	3300029939	Bog	EVGLVLVGFDRTSMPMHAGDLTRQGLGHAGVILFRRLVPTVAYGRQARLLVDFWRETVDWEWADRIEYLPRA
Ga0311371_102687071	3300029951	Palsa	PALLMTLRDHRMILVGFDRASMPMHAGTLTREGVGHAGVILFRRSIPTIAYGRQARHLVDLIDEAKDWDWADRIEYLPRISR
Ga0311371_115033372	3300029951	Palsa	VKASPIIHISDWEDGAYLSVKDPALLMALREAKMILVGFDRASMPMHAGELTRGGLGHAGVILFRRSVSAVAYGRQARLLVNFWREALDEDWADRIEYLPHDLRLLTTPGP
Ga0302188_103542431	3300029986	Bog	AYLSVKDPALLMTLRESEMILVGFDRASIPMHAGELTREGLGHAGVILFRRSVPAVAYGKQARLLVDLWREEEDWDWADRIEYLPRP
Ga0311350_118269392	3300030002	Fen	SVKDPALLMTLREARLVLVGFDRRSMAMHAGDLTREGLGHSGVILFRRSVPVVAYGRQARLLVDFWRLGHPLDWDDRIVYLPHGT
Ga0311338_103091671	3300030007	Palsa	LHVADWEKGAYLSTKDPALLMVLRESNMILVSFDRSSLPMHAGKLTRESLGHAGVILFRRAVPAAAFGAQARLLVNFWREARDWDWADRIEYLPHDPTHRA
Ga0302177_100389335	3300030053	Palsa	MILVSFDRASIPMHAGDLTREGLGHAGVILFRRSVSSIAYGSQARLLLEFWKAAADQDWSDRVEYLPRAHTPQHG
Ga0311372_100925691	3300030520	Palsa	LVHISQWQNGACLSLKDPALLMTLRDHRMILVGFDRASMPMHAGTLTREGVGHAGVILFRRSIPTIAYGRQARHLVDLIDEAKDWDWADRIEYLPRISR
Ga0311354_115254801	3300030618	Palsa	KGAYLSTKDPALLMVLRESNMILVSFDRSSLPMHAGKLTRESLGHAGVILFRRAVPAAAFGAQARLLVNFWREARDWDWADRIEYLPHDPTHRA
Ga0302310_103044133	3300030737	Palsa	RESAMILVSFDRASIPMHAGDLTREGLGHAGVILFRRSVSSIAYGSQARLLLEFWKAAADQDWSDRVEYLPRAHTPQHG
Ga0302323_1029209501	3300031232	Fen	RDPSLILVGFDRRTMAMHAGQLTREGLGHAGVIRFRRSVAQMDYGKQARLLVEFWREAADWDWADRIEYLPRP
Ga0302325_103220692	3300031234	Palsa	MIHISDWKDGAYLSVKDPPLLMALRETETILVGFDRASLPMHAVHLTREGLGHAGIILFRRSVSTIAYGKQSSLLVSFWREAKNWDWADRIEYLPRP
Ga0302324_1008147321	3300031236	Palsa	HISDWKDGAFLSAKDPALLMALYESEMVLVSFDRASLPMHAGKLTREGLGHAGVILFRRSVPSLAYGKQARLLVNFWNEAETWEWADRIAYLPSS
Ga0265320_103500201	3300031240	Rhizosphere	GFDRASMAMHAGELTREGLGHAGVILFRRSVSSIAYGKQAKLLIQFWQEAKDWDWADRIEYLPRPGSLNA
Ga0265327_101984342	3300031251	Rhizosphere	LTDWREGAYLSAKDPALLMTLREANLVLVGFDRASMVMHAGALTREGLGHAGVILFRRSVPVVAYGKQAKLLVSLWRDTGSWDWADRIVYLPLEPLASR
Ga0265327_102381252	3300031251	Rhizosphere	PALLMTLREANLVLVGFDRASMAMHAGTLTREGLGHSGVILFRRSVPVVAYGKQARLLVDLWRLAQVWDWADRIVYLPQGA
Ga0302320_100603063	3300031524	Bog	MILVGFDRASMAMHAASLTRQGVGHAGVILFRRSVSTIAYGRQARLLVELMRESNDSDWADRIEYLPRQ
Ga0302320_108450432	3300031524	Bog	HDTPLLMTLRESETILVGFDRASLPMHAGALTREGLGHAGVILFRRSVSALAYGRQARLLVSFWREAGHWDWADRIEYLPPP
Ga0265314_101923411	3300031711	Rhizosphere	YLASKDPALLMTLREANLVLVGFDRASMAMHAGTLTREGLGHSGVILFRRSVPVVAYGKQARLLVDLWRLAQVWDWADRIVYLPQGA
Ga0265342_100457771	3300031712	Rhizosphere	GFDQASMAMHAGVLTREGLGHAGVILFRRSVPVMAYGQQAKLLVSLWRDAGGWDWADRIVYLPLEPLASR
Ga0307476_108186992	3300031715	Hardwood Forest Soil	KGGAYLSAKDPQLLMALRESNLILVGFDRASIPMHAGQLTREALGHAGVILFRRSVPSVGYGKQARLLVSFWSEALDWDWADRIEYLPRP
Ga0307410_101346493	3300031852	Rhizosphere	RISKDPVLLPVLREHGLIIVSFDRKTMAMHAGELTRAGGGHAGVILFRRTVSQMDYGKQSRLLVEFWKEAKDWDWADRIEYLPRS
Ga0302322_1010316911	3300031902	Fen	VGFDRASIPMHAGKLTREGLGHAGVILFRRSVPAVAYGKQARLLVSLWCEAEEWDWADRIEYLPRP
Ga0308175_1018092882	3300031938	Soil	MALRELGLILVGFDRASIPLHAENLTREGLGHAGIILFRRSVLRTAYGKQAQLLVDLWSQASDWDWADRIQYLLLPNSVS
Ga0335079_107030081	3300032783	Soil	LLMALRESEIVIVGFDRATLPMYAGNLTREGLGHAGVILFRRSVPQVAFGKQARLLVDFWGEASAWDWADRIEYLPRS
Ga0335073_112816601	3300033134	Soil	LLEVLREHKMVLVTFDRRTMAMHAGELTRCAGGHAGVILFRRSVSQMDYGKQSRLVIEFWKEARVWDWSDRIEYLPRT
Ga0326727_1000160541	3300033405	Peat Soil	MDGKHRMSKDPVLLAALREPGLVLVSFDRRTLAMHAGQLTRGSTGHAGAILFRRSVSQMDYGKQSRLLVEFWREAADWDWADRIEYLPRQ
Ga0326727_110894301	3300033405	Peat Soil	FPMAHIADWRDGACLQLKDPALLMTLREEHLVLVSFDRASLAYHAGMLTREGVGHAGVILFRRSISRVAYGAQARLLVSFWREAAGWDWADLVIYLPG
Ga0371487_0192698_723_977	3300033982	Peat Soil	MSKDPVLLAALREPGLVLVSFDRRTLAMHAGQLTRGSTGHAGAILFRRSVSQMDYGKQSRLLVEFWREAADWDWADRIEYLPRQ
Ga0371488_0547678_272_517	3300033983	Peat Soil	MDGKHRMSKDPVLLAALREPGLVLVSFDRRTLAMHAGQLTRGSTGHAGAILFRRSVSQMDYGKQSRLLVEFWREAADWDWAD
Ga0370492_0096075_923_1213	3300034282	Untreated Peat Soil	AYLSVKDPALLMALRESAMVLVSFDRASLPMHAGDLTRQGLGHAGVILLRRSVSSIAYGAQARLLLDFWQDAMSQEWADRVEYLPRDQIPLDSSES

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062281

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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