NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F062769

Metagenome / Metatranscriptome Family F062769

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F062769
Family Type Metagenome / Metatranscriptome
Number of Sequences 130
Average Sequence Length 62 residues
Representative Sequence MTDLSTFSTWLASATRSAILVVRARVYQARAMNPALRSEANALLKRITQELAARGEYDRRCAA
Number of Associated Samples 67
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 84.62 %
% of genes near scaffold ends (potentially truncated) 21.54 %
% of genes from short scaffolds (< 2000 bps) 90.77 %
Associated GOLD sequencing projects 61
AlphaFold2 3D model prediction Yes
3D model pTM-score0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (50.769 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow
(15.385 % of family members)
Environment Ontology (ENVO) Unclassified
(31.538 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(53.077 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 58.24%    β-sheet: 0.00%    Coil/Unstructured: 41.76%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.2.2.1: Ribosomal protein L29 (L29p)d1vq8v11vq80.81791
b.34.15.1: Hypothetical protein YfhHd1sf9a11sf90.78192
a.118.1.25: RPA1889-liked2i9ca12i9c0.76541
a.7.8.1: GAT domaind1wrda11wrd0.76303
a.71.1.0: automated matchesd2c0ga12c0g0.75759

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 130 Family Scaffolds
PF04002RadC 28.46
PF00092VWA 10.77
PF08273Prim_Zn_Ribbon 1.54
PF14312FG-GAP_2 0.77
PF02899Phage_int_SAM_1 0.77
PF03837RecT 0.77
PF01527HTH_Tnp_1 0.77
PF12146Hydrolase_4 0.77

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 130 Family Scaffolds
COG2003DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motifReplication, recombination and repair [L] 28.46
COG4643Uncharacterized domain associated with phage/plasmid primaseMobilome: prophages, transposons [X] 1.54
COG3723Recombinational DNA repair protein RecTReplication, recombination and repair [L] 0.77
COG4973Site-specific recombinase XerCReplication, recombination and repair [L] 0.77
COG4974Site-specific recombinase XerDReplication, recombination and repair [L] 0.77

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A50.77 %
All OrganismsrootAll Organisms49.23 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000242|TDF_OR_ARG05_123mDRAFT_1014876All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae1963Open in IMG/M
3300000347|ElkS_mat_CD2ADRAFT_1009709All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae2090Open in IMG/M
3300002495|BRMGV_1036900Not Available514Open in IMG/M
3300002822|BMAI_1075487All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae1622Open in IMG/M
3300004001|Ga0055450_10330008Not Available567Open in IMG/M
3300004004|Ga0055451_10476258Not Available514Open in IMG/M
3300004005|Ga0055448_10292574Not Available643Open in IMG/M
3300004018|Ga0055452_10067205Not Available1116Open in IMG/M
3300004018|Ga0055452_10215129Not Available643Open in IMG/M
3300004021|Ga0055449_10244522Not Available615Open in IMG/M
3300004021|Ga0055449_10359656Not Available504Open in IMG/M
3300004027|Ga0055459_10070848All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae864Open in IMG/M
3300004113|Ga0065183_10176002Not Available892Open in IMG/M
3300006467|Ga0099972_13539498All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria934Open in IMG/M
3300007784|Ga0102955_1136601Not Available662Open in IMG/M
3300009037|Ga0105093_10248143All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1931Open in IMG/M
3300009078|Ga0105106_10290863All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1184Open in IMG/M
3300009082|Ga0105099_10260994Not Available1006Open in IMG/M
3300009091|Ga0102851_10660275Not Available1101Open in IMG/M
3300009111|Ga0115026_10955304Not Available682Open in IMG/M
3300009131|Ga0115027_10527054All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa856Open in IMG/M
3300009166|Ga0105100_10285614All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300009167|Ga0113563_11336278All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → unclassified Thiocapsa → Thiocapsa sp. KS1839Open in IMG/M
3300009179|Ga0115028_10237364Not Available1181Open in IMG/M
3300009430|Ga0114938_1012027All Organisms → cellular organisms → Bacteria → Proteobacteria3899Open in IMG/M
3300009430|Ga0114938_1090593Not Available1116Open in IMG/M
3300009504|Ga0114946_10286693Not Available871Open in IMG/M
3300009504|Ga0114946_10515661All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium610Open in IMG/M
3300009506|Ga0118657_10227540All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae2570Open in IMG/M
3300009506|Ga0118657_11789451All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiococcus → Thiococcus pfennigii715Open in IMG/M
3300009509|Ga0123573_10015699All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae8595Open in IMG/M
3300009509|Ga0123573_10266692All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea1667Open in IMG/M
3300009509|Ga0123573_10290882All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1585Open in IMG/M
3300009509|Ga0123573_10337507All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1453Open in IMG/M
3300009509|Ga0123573_10391690All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1333Open in IMG/M
3300009509|Ga0123573_10447517All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae1233Open in IMG/M
3300009509|Ga0123573_10497296All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae1160Open in IMG/M
3300009509|Ga0123573_10634385All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae1008Open in IMG/M
3300009509|Ga0123573_11490909Not Available629Open in IMG/M
3300010392|Ga0118731_104310573Not Available610Open in IMG/M
3300010392|Ga0118731_110781805All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae967Open in IMG/M
3300010392|Ga0118731_113337183All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae1122Open in IMG/M
3300010392|Ga0118731_114476275All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae1474Open in IMG/M
3300010412|Ga0136852_10180089All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae2123Open in IMG/M
3300010412|Ga0136852_10336798All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea1481Open in IMG/M
3300010412|Ga0136852_10580292All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae1082Open in IMG/M
3300010412|Ga0136852_11422351Not Available657Open in IMG/M
3300010412|Ga0136852_12197773Not Available517Open in IMG/M
3300010430|Ga0118733_101290474All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea1457Open in IMG/M
3300010430|Ga0118733_106914185All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea590Open in IMG/M
3300010997|Ga0139324_1122003All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea674Open in IMG/M
3300019746|Ga0194008_1051315Not Available610Open in IMG/M
(restricted) 3300023086|Ga0233407_10092804Not Available538Open in IMG/M
3300025106|Ga0209398_1072359Not Available854Open in IMG/M
3300025135|Ga0209498_1141551Not Available923Open in IMG/M
3300025554|Ga0210060_1000831All Organisms → cellular organisms → Bacteria → Proteobacteria7835Open in IMG/M
3300025554|Ga0210060_1024365All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria972Open in IMG/M
3300025573|Ga0210133_1160184Not Available501Open in IMG/M
3300025717|Ga0207419_1045289All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae1550Open in IMG/M
3300025895|Ga0209567_10056230All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales1819Open in IMG/M
3300027877|Ga0209293_10078595All Organisms → cellular organisms → Bacteria1441Open in IMG/M
3300027917|Ga0209536_102291030All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiococcus → Thiococcus pfennigii641Open in IMG/M
3300027917|Ga0209536_102531512Not Available604Open in IMG/M
3300028598|Ga0265306_10537663All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea642Open in IMG/M
3300028599|Ga0265309_11229660Not Available522Open in IMG/M
3300028600|Ga0265303_10499405All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria978Open in IMG/M
3300031256|Ga0315556_1007566Not Available5478Open in IMG/M
3300031256|Ga0315556_1021451All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2898Open in IMG/M
3300031256|Ga0315556_1024355All Organisms → cellular organisms → Bacteria → Proteobacteria2680Open in IMG/M
3300031256|Ga0315556_1120779Not Available985Open in IMG/M
3300031256|Ga0315556_1188420Not Available736Open in IMG/M
3300031341|Ga0307418_1065493Not Available968Open in IMG/M
3300031341|Ga0307418_1127103Not Available655Open in IMG/M
3300031367|Ga0307440_1038687All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1481Open in IMG/M
3300031367|Ga0307440_1093634All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea863Open in IMG/M
3300031367|Ga0307440_1132181Not Available698Open in IMG/M
3300031367|Ga0307440_1151588Not Available642Open in IMG/M
3300031665|Ga0316575_10210938Not Available809Open in IMG/M
3300031691|Ga0316579_10021037All Organisms → cellular organisms → Bacteria → Proteobacteria2902Open in IMG/M
3300031691|Ga0316579_10082974All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae1527Open in IMG/M
3300031691|Ga0316579_10087383All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae1487Open in IMG/M
3300031691|Ga0316579_10286474Not Available796Open in IMG/M
3300031691|Ga0316579_10341362Not Available724Open in IMG/M
3300031691|Ga0316579_10469552Not Available609Open in IMG/M
3300031691|Ga0316579_10516690Not Available578Open in IMG/M
3300031699|Ga0315535_1053813All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae1589Open in IMG/M
3300031699|Ga0315535_1085563Not Available1194Open in IMG/M
3300031727|Ga0316576_10371585All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae1062Open in IMG/M
3300031727|Ga0316576_11194388All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiococcus → Thiococcus pfennigii537Open in IMG/M
3300031728|Ga0316578_10601770Not Available644Open in IMG/M
3300031728|Ga0316578_10755318Not Available565Open in IMG/M
3300031733|Ga0316577_10579715Not Available638Open in IMG/M
3300032061|Ga0315540_10003314All Organisms → cellular organisms → Bacteria → Proteobacteria8998Open in IMG/M
3300032061|Ga0315540_10339167Not Available614Open in IMG/M
3300032061|Ga0315540_10342219Not Available610Open in IMG/M
3300032168|Ga0316593_10146958Not Available856Open in IMG/M
3300032168|Ga0316593_10344729Not Available569Open in IMG/M
3300032231|Ga0316187_10110272All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae2158Open in IMG/M
3300032231|Ga0316187_10155514All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1780Open in IMG/M
3300032231|Ga0316187_10362910All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea1098Open in IMG/M
3300032231|Ga0316187_10382369Not Available1065Open in IMG/M
3300032231|Ga0316187_10791961All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea700Open in IMG/M
3300032231|Ga0316187_11033518All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea602Open in IMG/M
3300032231|Ga0316187_11312051Not Available528Open in IMG/M
3300032251|Ga0316198_10543985All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea634Open in IMG/M
3300032252|Ga0316196_10289189Not Available714Open in IMG/M
3300032252|Ga0316196_10360194All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea626Open in IMG/M
3300032258|Ga0316191_10429024All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea962Open in IMG/M
3300032258|Ga0316191_10442851All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea945Open in IMG/M
3300032258|Ga0316191_11033363Not Available594Open in IMG/M
3300032259|Ga0316190_10927940Not Available572Open in IMG/M
3300032259|Ga0316190_10936391Not Available569Open in IMG/M
3300032260|Ga0316192_10630491Not Available725Open in IMG/M
3300032260|Ga0316192_10778269Not Available643Open in IMG/M
3300032260|Ga0316192_11005683Not Available558Open in IMG/M
3300032262|Ga0316194_10094443All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea1933Open in IMG/M
3300032262|Ga0316194_10551552Not Available726Open in IMG/M
3300032262|Ga0316194_10562346Not Available719Open in IMG/M
3300032262|Ga0316194_10700452Not Available637Open in IMG/M
3300032272|Ga0316189_10433121All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1015Open in IMG/M
3300032272|Ga0316189_10630916Not Available820Open in IMG/M
3300032272|Ga0316189_10754645All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Lamprocystis → Lamprocystis purpurea741Open in IMG/M
3300032272|Ga0316189_11075744Not Available608Open in IMG/M
3300032276|Ga0316188_10202455All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1003Open in IMG/M
3300033413|Ga0316603_11723041Not Available594Open in IMG/M
3300033416|Ga0316622_102251356Not Available631Open in IMG/M
3300033416|Ga0316622_102412035All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiococcus → Thiococcus pfennigii607Open in IMG/M
3300033429|Ga0316193_11249940Not Available590Open in IMG/M
3300033429|Ga0316193_11488526Not Available537Open in IMG/M
3300033557|Ga0316617_102002739Not Available595Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Worm BurrowEnvironmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow15.38%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere11.54%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment10.77%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands8.46%
Salt Marsh SedimentEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment7.69%
SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Sediment6.92%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh4.62%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine3.85%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment3.08%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland3.08%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.08%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment2.31%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater2.31%
SedimentEnvironmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment2.31%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.54%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment1.54%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment1.54%
Mangrove SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment1.54%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.54%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.77%
SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment0.77%
Mangrove SoilEnvironmental → Aquatic → Marine → Oceanic → Sediment → Mangrove Soil0.77%
Mangrove SoilEnvironmental → Aquatic → Marine → Oceanic → Oil-Contaminated Sediment → Mangrove Soil0.77%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.77%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine0.77%
Hypersaline MatEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Microbial Mats → Hypersaline Mat0.77%
Hypersaline MatEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Microbial Mats → Hypersaline Mat0.77%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.77%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000242Marine microbial communities from chronically polluted sediments in Tierra del Fuego: Site OR sample ARG 05_12.3mEnvironmentalOpen in IMG/M
3300000347Hot spring microbial communities from Elkhorn Slough, Monterey Bay, USA - CD2AEnvironmentalOpen in IMG/M
3300002495454 Fosmid SequenceEnvironmentalOpen in IMG/M
3300002822Illumina_Fosmid_BertiogaEnvironmentalOpen in IMG/M
3300004001Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWC_D1EnvironmentalOpen in IMG/M
3300004004Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWB_D2EnvironmentalOpen in IMG/M
3300004005Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWA_D2EnvironmentalOpen in IMG/M
3300004018Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWC_D2EnvironmentalOpen in IMG/M
3300004021Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWB_D1EnvironmentalOpen in IMG/M
3300004027Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D2EnvironmentalOpen in IMG/M
3300004113Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_12 (version 2)EnvironmentalOpen in IMG/M
3300006467Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935EnvironmentalOpen in IMG/M
3300007784Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_D1_MGEnvironmentalOpen in IMG/M
3300009037Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009082Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009179Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1EnvironmentalOpen in IMG/M
3300009430Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big SpringEnvironmentalOpen in IMG/M
3300009504Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep SedimentEnvironmentalOpen in IMG/M
3300009506Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8EnvironmentalOpen in IMG/M
3300009509Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11EnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300010412Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10EnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300010997ECM15MPS05_Aassembled -- Sediment microbial communities from coastal marsh in Port Sulphur, LA sequencing method A (2X250bp)EnvironmentalOpen in IMG/M
3300019746Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_4-5_MGEnvironmentalOpen in IMG/M
3300023086 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_7_MGEnvironmentalOpen in IMG/M
3300025106Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring (SPAdes)EnvironmentalOpen in IMG/M
3300025135Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment (SPAdes)EnvironmentalOpen in IMG/M
3300025554Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025573Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025717Hot spring microbial communities from Elkhorn Slough, Monterey Bay, USA - MD2AEnvironmentalOpen in IMG/M
3300025895Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_12 (SPAdes)EnvironmentalOpen in IMG/M
3300027877Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300028598Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160420 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300028599Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160524 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300028600Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160317 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300031256Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-10EnvironmentalOpen in IMG/M
3300031341Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-20EnvironmentalOpen in IMG/M
3300031367Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-10EnvironmentalOpen in IMG/M
3300031665Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3Host-AssociatedOpen in IMG/M
3300031691Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrAHost-AssociatedOpen in IMG/M
3300031699Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-20EnvironmentalOpen in IMG/M
3300031727Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5Host-AssociatedOpen in IMG/M
3300031728Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrCHost-AssociatedOpen in IMG/M
3300031733Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1Host-AssociatedOpen in IMG/M
3300032061Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-10EnvironmentalOpen in IMG/M
3300032168Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032231Coastal sediment microbial communities from Maine, United States - Cross River worm burrow 1EnvironmentalOpen in IMG/M
3300032251Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A anoxicEnvironmentalOpen in IMG/M
3300032252Coastal sediment microbial communities from Maine, United States - Eddy sediment 2 cmEnvironmentalOpen in IMG/M
3300032258Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2 cmEnvironmentalOpen in IMG/M
3300032259Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2EnvironmentalOpen in IMG/M
3300032260Coastal sediment microbial communities from Maine, United States - Merrow Island worm burrowEnvironmentalOpen in IMG/M
3300032262Coastal sediment microbial communities from Maine, United States - Cross River sediment 1EnvironmentalOpen in IMG/M
3300032272Coastal sediment microbial communities from Maine, United States - Lowes Cove worm burrowEnvironmentalOpen in IMG/M
3300032276Coastal sediment microbial communities from Maine, United States - Phippsburg worm burrow 1EnvironmentalOpen in IMG/M
3300033413Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCTEnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033429Coastal sediment microbial communities from Maine, United States - Merrow Island sediment 2EnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
TDF_OR_ARG05_123mDRAFT_101487623300000242MarineMTDLSTFSTWLASATRSAILVVRARVYQVRAMNPALRSEANALLKRITQELAARGEYDHRCAA*
ElkS_mat_CD2ADRAFT_100970943300000347Hypersaline MatMTDLDAFSNWLTSATRAAILAVRARVYLAREQHPAWRSATNTILKRITQELAARGEYDRRCVA*
BRMGV_103690013300002495Mangrove SoilMTDLSTFSAWLVSATRSAILVVRERVHQARRQNPAQRSEANALLKRITQELAARGEYDRRCAA*
BMAI_107548723300002822Mangrove SoilMTDLSSFSAWLVSATRAAILVARDRVYQARRQSPQQRSEANALLRRIAQELAARGEYDRRCAA*
Ga0055450_1033000823300004001Natural And Restored WetlandsMTDLDAFSAWIGSATRPALLVARARVYQARRQAPEERPAANALLKRIAQELAARGAFAKPRTA*
Ga0055451_1047625823300004004Natural And Restored WetlandsFSAWIGSATRPALLVARARVYQARRQAPKERPAANALLKRITQELAARGAFAKPRTV*
Ga0055448_1029257423300004005Natural And Restored WetlandsMTDLSTFSAWLTSATRSAILVVRARVYRARERYPELRSEANALLKRITQELAARGEYDRRCLV*
Ga0055452_1006720533300004018Natural And Restored WetlandsMTDLSTFSIWLTSATRSAILVVRARVYEAREQHPDLRSEANAILKRITQELAARGEYDRRCVV*
Ga0055452_1021512913300004018Natural And Restored WetlandsMTDLDAFSAWIGSATRPALLVARARVYQARRQAPEERPAANALLKRITQGLAARGAFGKPRTV*
Ga0055449_1024452223300004021Natural And Restored WetlandsWIGSATRPALLVARARVYQARRQAPEERPVANAILKRITQELAARGAFAKPRTV*
Ga0055449_1035965623300004021Natural And Restored WetlandsSGDTPMTDLDAFSAWIGSATRPALLVARARVYQARRQAPEERPAANALLKRIAQELAARGAFAKPRTA*
Ga0055459_1007084823300004027Natural And Restored WetlandsMTDLSTFSAWLTSATRSAILVVRARVYRARERYPELRSEANALLKRITQELAARGEYDRRCL
Ga0065183_1017600213300004113Pelagic MarineMTDLSTFSTWLASATRSAILLVRARVYQARAMNPALRSEANALLKRITQELAAHGEYDRRCAA*
Ga0099972_1353949833300006467MarineMTDLSTFSNWLTSATRLAILVVRARVYEARAMNPALRSEANALLKRITRELAARGEYDRRFAA*
Ga0102955_113660113300007784SoilMTNLNSFSTWLTSATRSAILVVRARVYQARGQNPALRSDANALLKRITQELAARGEYDRRFAA*
Ga0105093_1024814313300009037Freshwater SedimentMTDLPSFSAWLVSATRAAILVVRERAYQARRLHPERRSEANAILKTITQELAARGEYDRRCAA*
Ga0105106_1029086333300009078Freshwater SedimentMTDLTSFSAWLVSATRAAILVVRERVYQARRRNPELRSEANAILKRITQELAARGEYDRRYAA*
Ga0105099_1026099413300009082Freshwater SedimentMTDLTSFSTWLVSATRAAILVVRERVYQARRLHPELRSEANAILKTITQDLAARGEYDRRCAA*
Ga0102851_1066027523300009091Freshwater WetlandsMTDLPSFSAWLVSATRAAILVVRERVYQARRLHPELRSEANAILKRITQELAARGEYDRRCAA*
Ga0115026_1095530413300009111WetlandMNDLPSFSAWLVSATRAAILVVRERVYQARRLHPERRSEANAILKTITQELAARGEYDRRCAA*
Ga0115027_1052705413300009131WetlandMTDLRSFSAWLVAATRAAILVVRERVYQARRRNPELRSEANAILKRITQELAARGEYDRRCAA*
Ga0105100_1028561423300009166Freshwater SedimentMTDLPSFSAWLVSATRAAILVVRERGDQARRRNPELRSEANAILKRITQELAARGEYDRRCAA*
Ga0113563_1133627813300009167Freshwater WetlandsMTDLTSFSAWLVSATRAAILVVRERVHQARRLHPERRSEANAILKTITQELAARGEYDRRYAA*
Ga0115028_1023736423300009179WetlandMTDLPSFSAWLVSATRAAILVVRERVYQARRLHPERRSEANAILKTITQELAARGEYDRRCAA*
Ga0114938_101202763300009430GroundwaterMTDLSTFSAWLVSATRAAILVARDRVYQARRQTPERRSEANALIKRITQELAARGEYDRRYAA*
Ga0114938_109059313300009430GroundwaterMTDLSSFSAWLVSATRAAILVVRERVYQARRLNPERRSEANAILKTITQELAARGEYDRRCAT*
Ga0114946_1028669323300009504SedimentMNDFETFSTWLTSATRSAIRVVRAELYRARGEHPELRAEANALLRRLTQELAARGEYDRRFPF*
Ga0114946_1051566123300009504SedimentMNDFETFSTWLTSATRSAIRVVRAELYRARGEHPELRTEANALLKRLTQELAARGEYDRRFPV*
Ga0118657_1022754023300009506Mangrove SedimentMTDLDTFSAWLVSATRSAILVVRERVYQARSMDPAQRSEANALLKRITQELAARGENDPRCAD*
Ga0118657_1178945123300009506Mangrove SedimentMTDLSTFSAWLVSATPAAILVARNRVYQARRHCPESRSEANALIKRITQELAARGEYDRRCAA*
Ga0123573_1001569943300009509Mangrove SedimentMTDLDTFSAWLVSATRSAILVVRERVYQARSMDPAQRSEANALLKRITQELAARGEYDRRCAA*
Ga0123573_1026669213300009509Mangrove SedimentVSATRSAILVVRDRVYQARSTDPAQRSEANALLKRITQELAARGEYDRRCAA*
Ga0123573_1029088223300009509Mangrove SedimentMTDLDTFSAWLVSATRAAILVARERVYRARSMDPAQRSQANALLKRITQELAARGEYDRRCAA*
Ga0123573_1033750723300009509Mangrove SedimentMTDLDTFSAWLVSATRSAILVVRERVYQARSMDPAQRSEANALLKHITRELAARGEYDRRCAV*
Ga0123573_1039169013300009509Mangrove SedimentMIDLDTFSFWLVSATRSAILVVRERVYQARSMTPAQRSEANALLKRITQELAARGEYDRRCAV*
Ga0123573_1044751713300009509Mangrove SedimentMTDLSTFSAWLVSATPAAILVARNRVYQARRQSPESRSEANALIKRITQELAARGEYDRRCAA*
Ga0123573_1049729633300009509Mangrove SedimentGDTPMTDLDTFSAWLVSATRSAILVVRERVYQARSMDPAQRSEANALLKRITQELAARGEYDPRCAV*
Ga0123573_1063438523300009509Mangrove SedimentMTDLSSFSAWLVSATRSAIVVVRERVYQARRLNPEQRSEANALLKRIAQELAARGEYDR
Ga0123573_1149090923300009509Mangrove SedimentTDLSSFSAWMVSATRAAILVTRDRVYQARRHCPERRSEANALIKRITQELAARGEHDRRYAA*
Ga0118731_10431057313300010392MarineMTDINTFSNWLTSATRSAILVVRARVYQDRSMDPAQRSEANALIKRITQELAARGEFDRRLAA*
Ga0118731_11078180523300010392MarineMTDLNTFSNWLTSATRSAILVVRARVYQTRGQNPALRSEANALLKCITQELAARGEYDRRFAA*
Ga0118731_11333718323300010392MarineMTDLNTFSTWLASATRSAILVVRARVYQARAMNPALRSEANALLKRITQELAARGEYDRRCAA*
Ga0118731_11447627513300010392MarineMTDLSSFSNWLTSATRLAILVVRARVYEARAMNPALRSEANALLKRITRELAARGEYDRRFAA*
Ga0136852_1018008923300010412Mangrove SedimentMTDLSSFSAWLVSATRSAIVVVRERVYQARRLNPEQRSEANALLKRIAQELAARGEYDRRCAV*
Ga0136852_1033679823300010412Mangrove SedimentMTDLDTFSAWLVSATRSAILVVRERVYQARSMDPAQRSEANALLKRITQELAARGENDPRCAV*
Ga0136852_1058029213300010412Mangrove SedimentMSDLSSFSAWLVSATRSAILVVRDRVYQARSTDPAQRSEANALLKRITQELAARGEYDRRCAA*
Ga0136852_1142235113300010412Mangrove SedimentMTDLDTFSAWLVSATRSAILVVRERVYQARSMTPAQRSEANALLKRITQELAARGEYDRRCAV*
Ga0136852_1219777313300010412Mangrove SedimentMTDLETFSAWLVSATRSAILVVRERVYQARSMDPAQRSEANALLKHITRELAARGEYDPRCAV*
Ga0118733_10129047443300010430Marine SedimentMTDLSTFSTWLASATRSAILVVRARVYQARGQNPALRSEANALLKCITQELAARGEYDRRFAA*
Ga0118733_10691418513300010430Marine SedimentPAGACVSSFYGDTPMTDLSTFSNWLTSATRLAILVVRARVYEARAMNPALRSEANALLKRITRELAARGEYDRRFAA*
Ga0139324_112200313300010997SedimentDTPMTDVSSFSAWLVSATRAAILVARDRDYQARRHSPERRSEANALLKRITQELAARGEYDRRCPA*
Ga0194008_105131513300019746SedimentMTDLNTFSTWLASATRSAILVVRARVYRARATNPALRSEANALLKRITQELAARGEYDRRCAA
(restricted) Ga0233407_1009280413300023086SeawaterMTDLNTFSTWLTSATRSAILVVRARVYQARGQNPALRSEANALLKRITQELAARGEFDRRLAA
Ga0209398_107235913300025106GroundwaterMTDLSSFSAWLVSATRAAILVVRERVYQARRLNPERRSEANAILKTITQELAARGEYDRRCAT
Ga0209498_114155123300025135SedimentMNDFETFSTWLTSATRSAIRVVRAELYRARGEHPELRTEANALLKRLTQELAARGEYDRRFPI
Ga0210060_100083123300025554Natural And Restored WetlandsMTDLSTFSAWLTSATRSAILVVRARVYRAREQYPELRSEANAILKRITQELAARGEYDRRCLV
Ga0210060_102436523300025554Natural And Restored WetlandsMTDLNTFSTWLTSATRSAILVVRARVYRAREQHPELRSEANALLKRITRELAARGEYDRRCLV
Ga0210133_116018413300025573Natural And Restored WetlandsMTDLSSFSAWLVSATRAAILVARDRVYQARRQTPEQRSEANALLKRITQELAARGEYDRRCAA
Ga0207419_104528923300025717Hypersaline MatMTDLDAFSNWLTSATRAAILAVRARVYLAREQHPAWRSATNTILKRITQELAARGEYDRRCVA
Ga0209567_1005623033300025895Pelagic MarineMTDLSTFSTWLASATRSAILLVRARVYQARAMNPALRSEANALLKRITQELAAHGEYDRRCAA
Ga0209293_1007859513300027877WetlandMTDIPSFSAWLVSATRAAILVVRQRVYQARRRNPELRSEANAILKRITQELAARGEYDRRCAA
Ga0209536_10229103013300027917Marine SedimentMTDLNTFSTWLASATRSAILVVRARVYRARATNPALRSEANALLKRITQELAARGEYDRRIAA
Ga0209536_10253151213300027917Marine SedimentMTDLSTFSAWLVSATRPAILVVRARVYQARSMDPAQRSEANALLKCIAQELAARGEYDRRCAA
Ga0265306_1053766313300028598SedimentDTPMTDLNSFSTWLSSATRSAILVVRARVYQARATNPALRSEANALLKRITQELAAHGEYDRRCAA
Ga0265309_1122966013300028599SedimentMTDLSTFSTWLASATRSAILVVRARVYQARAMNPALRSEANALLKRITQELAARGEYDRRCAA
Ga0265303_1049940513300028600SedimentLASATRSAILVVRARVYQARAMNPARRSEANALLKRITQELAARGEYDRRCAA
Ga0315556_100756613300031256Salt Marsh SedimentMTDIRTFSNWLTSATRSAILVVRARVYQARERNPELRSEANALLKRITQELAARGEYDRRCLV
Ga0315556_102145143300031256Salt Marsh SedimentMTDLSSFSAWLVSATRAAILVARDRVYQARRHSPERRSEANALLKRIAQELAARGEYDRRCAA
Ga0315556_102435513300031256Salt Marsh SedimentMTDLSTFSTWLTSATRWAILVVRARVYRAREQHPELRSEANALLKRITQELAARGEYDRRCLV
Ga0315556_112077913300031256Salt Marsh SedimentMTDLDAFSAWIGSATRPALLVARARVYQARRQAPEERPAANAILKRITQELAARGAFAKPRTA
Ga0315556_118842023300031256Salt Marsh SedimentMSDLDAFSAWIGSATRPALLVARARVYQARRQAPEERPAANALLKRINQELAARGAFAKPRTA
Ga0307418_106549323300031341Salt MarshMTDLSSFRAWLVSATRAAILVARDRVYQARRHSPERRSEANALLKRIAQELAARGEYDRRCAA
Ga0307418_112710313300031341Salt MarshMTDLSSFSVWLASATRAAILVARDRVYQSRRHSPERRSEAIALLKRIAQELAARGEYDRRCAA
Ga0307440_103868733300031367Salt MarshVSPLFSGDTPMTDLDAFSAWIGSATRPALLVARARVYQARRQAPEERPAANALLKRIAQELAARGAFAKPRTA
Ga0307440_109363423300031367Salt MarshMTDLSSFSAWLVSATRAAILVARDRVYQTRRRSPERRSEANALLRRITQELAARGEYDRRCAA
Ga0307440_113218123300031367Salt MarshMTDLSSFRAWLVSATRAAILVARDRVYQARRHSPERRSEANALLKRIAQELAA
Ga0307440_115158813300031367Salt MarshMTDLSSFSACLVSATRAAILVARDRVYQARRQSPGRRSEANALLKHIAQELAARGEYDRRCAA
Ga0316575_1021093823300031665RhizosphereMTDLETFSTWLVSATRAAILVARDRVYQARRQSPESRPEANALIKRITQELAARGEYDRRCAA
Ga0316579_1002103713300031691RhizosphereWLTSATRSAILLVRARVYQAREQHPELRSEANALLKRITREFAARGEYDRRCLV
Ga0316579_1008297423300031691RhizosphereMTDLGTFSAWLTSATRSAILVVRARAYRAREQYPELRSEANALLKRITRELAARGEYDRRCAV
Ga0316579_1008738313300031691RhizosphereMTDLSTFSAWLTSATRSAILLVRARVYQAREQHPELRSEANALLKRITQELAAR
Ga0316579_1028647413300031691RhizosphereMTDLSTFSAWLTSATRSAILVVRARVYRAREQYPELRSEANAILKRITQELAARGEYDRRCLI
Ga0316579_1034136223300031691RhizosphereMTDLGTFSAWLPSATRSAILVVRAGVYEAREQNPELRSEANAILKRITRELAARGEYDRRCLV
Ga0316579_1046955213300031691RhizosphereMTDLSTFSAWLTSATRSAILVVRARVYRAREQNPELRSEANAIIKRITQELAARGEYDRRCAV
Ga0316579_1051669013300031691RhizosphereMTDINSFSAWLTSATRSAILVVRARVYRAREQYPELRSEANAILKRITQELAARGEYDRRCLV
Ga0315535_105381333300031699Salt Marsh SedimentMTDLDAFSAWIGSATRPALLVARARVYQARRQAPEERPAANALLKRITQELAARGAFGKPRTV
Ga0315535_108556323300031699Salt Marsh SedimentMTDFDAFSAWIGSATRPALLVARARVYQARRQAPKERPAANALLKRITQELAARGAFAKPRTV
Ga0316576_1037158523300031727RhizosphereMTDLDTFSNWLVSATRAAILVARDRVHQARRQSPESRSEANALIKRITQELAARGEYDRRCAA
Ga0316576_1119438813300031727RhizosphereMTDLSTFSAWLMTATRAAILIARDRVYQARKTHPALRSEANALIKRITQELAARGEYDRRCAA
Ga0316578_1060177023300031728RhizosphereNIFSTWLTSATRSAILVVRTRVYRAREQYPELRSEANALLKRITRELAARGEYDRRCVV
Ga0316578_1075531813300031728RhizosphereMTDLSTFSAWLTSATRSAILVVRARVYQAREQNPELRSEANALLKRITRELAARGEYDRRCLV
Ga0316577_1057971523300031733RhizosphereMTDLETFSTWLMSATRAAILVARDRVYQARRQSPESRSEANALLKRITQELAARGEYDRRCAA
Ga0315540_10003314123300032061Salt Marsh SedimentMTDLNTFSIWLTSATRSAILVVRARVYEAREQHPELRSEGNVLLKRITQELAARGEYDRRCVV
Ga0315540_1033916723300032061Salt Marsh SedimentMSDLDAFSAWIGSATRPALLVARARVYQARRQAPKERPAANALLKRINQELAARGAFAKPRTA
Ga0315540_1034221913300032061Salt Marsh SedimentMTDLDAFSAWIGSATRPALLVARARVYQARRQAPEERPAANAILKRITQELAARGAFAK
Ga0316593_1014695823300032168RhizosphereMTDLETFSTWLVSATRAAILVARDRVYQARRQSPESRSEANALLKRITQELAARGEYDRRCAA
Ga0316593_1034472913300032168RhizosphereMTDLSTFSAWLTSATRSAILVVRARVYQARERNPELRSEANAILKRITQELAARGEYDRRCPV
Ga0316187_1011027223300032231Worm BurrowMTDLSSFSNWLTSATRLAILVVRARVYEARAMNPALRSEANALLKRITRELAARGEYDRRFAA
Ga0316187_1015551443300032231Worm BurrowMTDINTFSNWLTSATRSAILVVRARVYQDRSMDPAQRSEANALIKRITQELAARGEFDRRLAA
Ga0316187_1036291033300032231Worm BurrowMTDLSTFSTWLTSATRSAILVVRARVYQTRGQNPALRSEANALLKCITQELAARGEYDRRFAA
Ga0316187_1038236923300032231Worm BurrowMTDLSTFRTWLASATRSAILVVRARVYRARAMNPALRSEANALLKRITQELAARGEYDRRYAA
Ga0316187_1079196113300032231Worm BurrowMTDLNTFSNWLTSATRSAILVVRARVYQDRSMDPAQRSEANALLKRITQELAARGEFDRRLAA
Ga0316187_1103351823300032231Worm BurrowMTDLNTFSTWLASATRSAILVVRARVYQAREMHPALRSEANALLKCITQELAARGEYDRRCAA
Ga0316187_1131205113300032231Worm BurrowMTDLNTFSNWLTSATRSAILVVRARVYQARGTNPALRSDANALIKRITQELAARGEYDRRCVA
Ga0316198_1054398513300032251SedimentMTDLSTFSNWLTSATRLAILVVRARVYEARAMNPALRSEANALLKRITRELAARGEYDRRFAA
Ga0316196_1028918923300032252SedimentMTDLSTFSNWLTSATRSAILVVRARVYQARAMNPALRSEANALLKRITQELAA
Ga0316196_1036019413300032252SedimentLNTFSTWLASATRSAILVVRARVYQARAMNPALRSEANALLKRITQELAARGEYDRRFAA
Ga0316191_1042902413300032258Worm BurrowMTNLNTFSTWLASATRSAILVVRARVYQARGQNPALRSEANALLKCITQELAARGEYDRRFAA
Ga0316191_1044285113300032258Worm BurrowTFSTWLASATRSAILVVRARVYQAREMHPALRSEANALLKCITQELAARGEYDRRCAA
Ga0316191_1103336313300032258Worm BurrowMTNLNTFSTWLASATRSAILVVRARVYQARGQNPALRSEANALLKCITQELAARGEYDRRLTA
Ga0316190_1092794023300032259Worm BurrowMTDLSTFSNWLASATRSAILVVRARVYQARGQNPALRSEANALLKCITQELAARGEYDRRFAA
Ga0316190_1093639113300032259Worm BurrowMTDLNTFSNWLTSATRSAILVVRARVYQARGTNPALRSEANALIKRITQELAARGEYDRRLTA
Ga0316192_1063049113300032260Worm BurrowMTDLSTFSAWLMSATRAAILVASDRVYQARRQSPERRSEANALIKRITQELAARGEYDRRCAA
Ga0316192_1077826913300032260Worm BurrowMTDLSTFSHWLTSATRLAILVVRARVYEARAMNPALRSEANALLKRITRELAARGEYDRRFAA
Ga0316192_1100568323300032260Worm BurrowMTDLNTFSTWLASATRSAILVVRARVYQARAMNPALRSEANALLKRITQELAARGEYDRRLTA
Ga0316194_1009444313300032262SedimentMTDLSTFSTWLASATRSAILVVRARVYQARAMHPALRSEANALLKCITQELAARGEYDRRCAA
Ga0316194_1055155223300032262SedimentMTDLNTFSAWLASATRSAILVVRARVYRARATNPALRSEANALLKRITQELAARGEY
Ga0316194_1056234623300032262SedimentMTDLSTFSAWLMSATRAAILVASDRVYQARRQSPERRSEANALIKRITQELAARGAYDRRCAA
Ga0316194_1070045223300032262SedimentMTDLNTFSNWLTSATRSAILVVRARVYQARATDPALRSEANALLKRITQEL
Ga0316189_1043312133300032272Worm BurrowNTFSNWLTSATRSAILVVRARVYQDRSMDPAQRSEANALIKRITQELAARGEFDRRLAA
Ga0316189_1063091623300032272Worm BurrowMTDLSTFSNWLTSATRSAILVVRARVYQARTTNPALRSEANALLKCITQELAARGEFDRRLAA
Ga0316189_1075464513300032272Worm BurrowMTDLSTFSTWLTSATRSAILVVRARVYQARGTNPALRSEANALIKRITPELAARGEFDRRLAA
Ga0316189_1107574413300032272Worm BurrowMTNLNTFSTWLTSATRSAILVVRARVYKDRSMDPAQRSEANALIQRITQELAARGEFDR
Ga0316188_1020245523300032276Worm BurrowMTDLPSFSAWLVSATRAAILVVRERVYQARRLNPERRSEANAILKTITQELAARGEYDRRCAA
Ga0316603_1172304113300033413SoilMTDIPSFSAWLVSATRAAILVVRERVYQARRLHPERRSEANAILKTITQELAARGEYDRRCAA
Ga0316622_10225135623300033416SoilMTDLPSFSTWLVSATRAAILVVRERVYQARRLHPERRSEANAILKRSTQELAARGEYDRRCAA
Ga0316622_10241203513300033416SoilMTDLPSFSAWLVSATRAAILVVRERVYQARRRNPELRSEANAILKRITQELAARGEYDHRCAA
Ga0316193_1124994013300033429SedimentMTDLPSFSAWLVSATRAAILVVRERVYQARRLNPEQRSEANAILKAITQELAARGEYDRRCA
Ga0316193_1148852613300033429SedimentMTDLNTFSTWLASATRSAILVVRARVYQARSMNPALRSEANALLKRITQELAARGEYDRRCAA
Ga0316617_10200273923300033557SoilDLPSFSAWLVSATRAAIVVARERVYQARRLHPERRSEANAILKTITQELAARGEYDRRYA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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