NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F062859

Metagenome Family F062859

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F062859
Family Type Metagenome
Number of Sequences 130
Average Sequence Length 76 residues
Representative Sequence MRVRLVRKLADRIDGVDLRGHEVDEVFDVSPRDARLLMAEEWAIAERRSADLPHRIERRSRSHSDVRQQAADRG
Number of Associated Samples 105
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 6.15 %
% of genes near scaffold ends (potentially truncated) 41.54 %
% of genes from short scaffolds (< 2000 bps) 80.00 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (70.769 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(10.769 % of family members)
Environment Ontology (ENVO) Unclassified
(38.462 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(63.077 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 8.82%    β-sheet: 13.73%    Coil/Unstructured: 77.45%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 130 Family Scaffolds
PF07609DUF1572 6.15
PF09413DUF2007 4.62
PF03551PadR 4.62
PF02426MIase 2.31
PF08308PEGA 2.31
PF13419HAD_2 1.54
PF02518HATPase_c 1.54
PF01541GIY-YIG 0.77
PF13418Kelch_4 0.77
PF13380CoA_binding_2 0.77
PF02515CoA_transf_3 0.77

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 130 Family Scaffolds
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 4.62
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 4.62
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 4.62
COG4829Muconolactone delta-isomeraseSecondary metabolites biosynthesis, transport and catabolism [Q] 2.31
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 0.77

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms70.77 %
UnclassifiedrootN/A29.23 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918013|NODE_16185_length_1013_cov_6.111550All Organisms → cellular organisms → Bacteria → Acidobacteria1045Open in IMG/M
2162886007|SwRhRL2b_contig_1047448All Organisms → cellular organisms → Bacteria → Acidobacteria1062Open in IMG/M
2162886013|SwBSRL2_contig_5530724All Organisms → cellular organisms → Bacteria1256Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_14183834All Organisms → cellular organisms → Bacteria → Acidobacteria1640Open in IMG/M
3300000789|JGI1027J11758_12272006Not Available719Open in IMG/M
3300001431|F14TB_101068171All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300003267|soilL1_10038228All Organisms → cellular organisms → Bacteria1577Open in IMG/M
3300003267|soilL1_10040760All Organisms → cellular organisms → Bacteria11096Open in IMG/M
3300003319|soilL2_10182265All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2052Open in IMG/M
3300003324|soilH2_10062473All Organisms → cellular organisms → Bacteria3376Open in IMG/M
3300003324|soilH2_10227911All Organisms → cellular organisms → Bacteria3109Open in IMG/M
3300004019|Ga0055439_10279139Not Available549Open in IMG/M
3300004114|Ga0062593_100013014All Organisms → cellular organisms → Bacteria4016Open in IMG/M
3300004114|Ga0062593_100062575All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2405Open in IMG/M
3300004114|Ga0062593_100103737All Organisms → cellular organisms → Bacteria2015Open in IMG/M
3300004114|Ga0062593_100375607All Organisms → cellular organisms → Bacteria → Acidobacteria1257Open in IMG/M
3300004157|Ga0062590_100604074All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300005093|Ga0062594_100105346All Organisms → cellular organisms → Bacteria → Acidobacteria1700Open in IMG/M
3300005093|Ga0062594_100805455All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300005289|Ga0065704_10002355All Organisms → cellular organisms → Bacteria10276Open in IMG/M
3300005290|Ga0065712_10179805All Organisms → cellular organisms → Bacteria → Acidobacteria1198Open in IMG/M
3300005294|Ga0065705_11124659Not Available517Open in IMG/M
3300005328|Ga0070676_10070489All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2097Open in IMG/M
3300005331|Ga0070670_101624703Not Available594Open in IMG/M
3300005332|Ga0066388_100988988All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1407Open in IMG/M
3300005332|Ga0066388_103031551All Organisms → cellular organisms → Bacteria → Acidobacteria858Open in IMG/M
3300005332|Ga0066388_108504044All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300005335|Ga0070666_11416639Not Available519Open in IMG/M
3300005337|Ga0070682_100332628All Organisms → cellular organisms → Bacteria → Acidobacteria1126Open in IMG/M
3300005337|Ga0070682_101213136Not Available637Open in IMG/M
3300005339|Ga0070660_101334675All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300005340|Ga0070689_100345591All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1247Open in IMG/M
3300005345|Ga0070692_10140985All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1364Open in IMG/M
3300005347|Ga0070668_100145667All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1912Open in IMG/M
3300005364|Ga0070673_100632356All Organisms → cellular organisms → Bacteria → Acidobacteria978Open in IMG/M
3300005365|Ga0070688_100197013All Organisms → cellular organisms → Bacteria1407Open in IMG/M
3300005366|Ga0070659_100771483Not Available835Open in IMG/M
3300005366|Ga0070659_100946574Not Available754Open in IMG/M
3300005367|Ga0070667_100646732All Organisms → cellular organisms → Bacteria → Acidobacteria976Open in IMG/M
3300005406|Ga0070703_10601122All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300005444|Ga0070694_100252232All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1335Open in IMG/M
3300005458|Ga0070681_11208889All Organisms → cellular organisms → Bacteria → Acidobacteria678Open in IMG/M
3300005466|Ga0070685_10745481All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300005530|Ga0070679_101730070Not Available573Open in IMG/M
3300005535|Ga0070684_100590012Not Available1033Open in IMG/M
3300005564|Ga0070664_101507077All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium636Open in IMG/M
3300005618|Ga0068864_100226304All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1728Open in IMG/M
3300005618|Ga0068864_100372984All Organisms → cellular organisms → Bacteria → Acidobacteria1351Open in IMG/M
3300005618|Ga0068864_100446151All Organisms → cellular organisms → Bacteria1237Open in IMG/M
3300005718|Ga0068866_10274209Not Available1042Open in IMG/M
3300005764|Ga0066903_104519266Not Available742Open in IMG/M
3300005841|Ga0068863_102576842Not Available518Open in IMG/M
3300005842|Ga0068858_101205457All Organisms → cellular organisms → Bacteria → Acidobacteria744Open in IMG/M
3300006046|Ga0066652_100425895All Organisms → cellular organisms → Bacteria1215Open in IMG/M
3300006237|Ga0097621_100676801Not Available948Open in IMG/M
3300006358|Ga0068871_100083569All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2648Open in IMG/M
3300006806|Ga0079220_12091475Not Available507Open in IMG/M
3300006852|Ga0075433_10046703All Organisms → cellular organisms → Bacteria3766Open in IMG/M
3300006871|Ga0075434_100792572All Organisms → cellular organisms → Bacteria → Acidobacteria964Open in IMG/M
3300006871|Ga0075434_101082589All Organisms → cellular organisms → Bacteria → Acidobacteria815Open in IMG/M
3300006904|Ga0075424_100160367All Organisms → cellular organisms → Bacteria2384Open in IMG/M
3300006904|Ga0075424_101846790Not Available639Open in IMG/M
3300006914|Ga0075436_100197537All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1424Open in IMG/M
3300006954|Ga0079219_10106579Not Available1391Open in IMG/M
3300007076|Ga0075435_100066158All Organisms → cellular organisms → Bacteria2940Open in IMG/M
3300009094|Ga0111539_13491287Not Available505Open in IMG/M
3300009100|Ga0075418_10240291All Organisms → cellular organisms → Bacteria → Acidobacteria1928Open in IMG/M
3300009100|Ga0075418_10483747All Organisms → cellular organisms → Bacteria1328Open in IMG/M
3300009100|Ga0075418_12892326Not Available524Open in IMG/M
3300009147|Ga0114129_10219546All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2565Open in IMG/M
3300009148|Ga0105243_10066121All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2907Open in IMG/M
3300009156|Ga0111538_10244972All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2270Open in IMG/M
3300009156|Ga0111538_10371093All Organisms → cellular organisms → Bacteria → Acidobacteria1812Open in IMG/M
3300009177|Ga0105248_10251575All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1989Open in IMG/M
3300009551|Ga0105238_11530269All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300009553|Ga0105249_10163632All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2152Open in IMG/M
3300010042|Ga0126314_11276083Not Available550Open in IMG/M
3300010044|Ga0126310_11263287Not Available595Open in IMG/M
3300010047|Ga0126382_11211388All Organisms → cellular organisms → Bacteria → Acidobacteria677Open in IMG/M
3300010358|Ga0126370_10552740All Organisms → cellular organisms → Bacteria → Acidobacteria984Open in IMG/M
3300010360|Ga0126372_12271093Not Available592Open in IMG/M
3300010360|Ga0126372_13206708Not Available508Open in IMG/M
3300010362|Ga0126377_10032722All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4410Open in IMG/M
3300010399|Ga0134127_10003211All Organisms → cellular organisms → Bacteria11746Open in IMG/M
3300010399|Ga0134127_11343687All Organisms → cellular organisms → Bacteria → Acidobacteria785Open in IMG/M
3300011119|Ga0105246_10800769All Organisms → cellular organisms → Bacteria → Acidobacteria836Open in IMG/M
3300012948|Ga0126375_11604467Not Available560Open in IMG/M
3300012951|Ga0164300_10474460Not Available708Open in IMG/M
3300012955|Ga0164298_10351408All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300012958|Ga0164299_10180490All Organisms → cellular organisms → Bacteria → Acidobacteria1200Open in IMG/M
3300012961|Ga0164302_11561506All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300012971|Ga0126369_12829189Not Available568Open in IMG/M
3300012986|Ga0164304_10563206All Organisms → cellular organisms → Bacteria → Acidobacteria844Open in IMG/M
3300013297|Ga0157378_10100777All Organisms → cellular organisms → Bacteria → Acidobacteria2637Open in IMG/M
3300013307|Ga0157372_12543479All Organisms → cellular organisms → Bacteria → Acidobacteria588Open in IMG/M
3300013308|Ga0157375_10002024All Organisms → cellular organisms → Bacteria17491Open in IMG/M
3300013308|Ga0157375_10665086All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1197Open in IMG/M
3300015371|Ga0132258_11251932All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1875Open in IMG/M
3300019361|Ga0173482_10226490Not Available782Open in IMG/M
3300021445|Ga0182009_10149088All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1109Open in IMG/M
3300025901|Ga0207688_10395307All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300025904|Ga0207647_10206189All Organisms → cellular organisms → Bacteria → Acidobacteria1136Open in IMG/M
3300025907|Ga0207645_10015697All Organisms → cellular organisms → Bacteria5024Open in IMG/M
3300025907|Ga0207645_10680660All Organisms → cellular organisms → Bacteria → Acidobacteria699Open in IMG/M
3300025908|Ga0207643_10198028All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1222Open in IMG/M
3300025908|Ga0207643_10638601All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300025920|Ga0207649_11682891Not Available502Open in IMG/M
3300025921|Ga0207652_11526506Not Available572Open in IMG/M
3300025926|Ga0207659_10003038All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium10014Open in IMG/M
3300025927|Ga0207687_11503367Not Available578Open in IMG/M
3300025930|Ga0207701_11537400Not Available538Open in IMG/M
3300025932|Ga0207690_11368852Not Available592Open in IMG/M
3300025933|Ga0207706_10222365All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1653Open in IMG/M
3300025933|Ga0207706_10566994All Organisms → cellular organisms → Bacteria → Acidobacteria977Open in IMG/M
3300025934|Ga0207686_10321054All Organisms → cellular organisms → Bacteria → Acidobacteria1157Open in IMG/M
3300025945|Ga0207679_10514542All Organisms → cellular organisms → Bacteria → Acidobacteria1070Open in IMG/M
3300025960|Ga0207651_10072960All Organisms → cellular organisms → Bacteria → Acidobacteria2439Open in IMG/M
3300025960|Ga0207651_10270587All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1399Open in IMG/M
3300025972|Ga0207668_10042498All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3079Open in IMG/M
3300026075|Ga0207708_10120485All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2044Open in IMG/M
3300026088|Ga0207641_11489028Not Available678Open in IMG/M
3300026088|Ga0207641_12643048Not Available500Open in IMG/M
3300026095|Ga0207676_11959561Not Available584Open in IMG/M
3300027775|Ga0209177_10422105Not Available539Open in IMG/M
3300031716|Ga0310813_10844543Not Available827Open in IMG/M
3300031740|Ga0307468_100945994All Organisms → cellular organisms → Bacteria → Acidobacteria752Open in IMG/M
3300031858|Ga0310892_10319324All Organisms → cellular organisms → Bacteria986Open in IMG/M
3300031908|Ga0310900_10098876All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1867Open in IMG/M
3300031943|Ga0310885_10109947All Organisms → cellular organisms → Bacteria → Acidobacteria1265Open in IMG/M
3300032003|Ga0310897_10640935Not Available528Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.77%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere6.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere6.15%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere6.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.38%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.38%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.62%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil3.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.08%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.08%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.08%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.08%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.08%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.31%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.31%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.54%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.54%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere1.54%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.54%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.77%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.77%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.77%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.77%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.77%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.77%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.77%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.77%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.77%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918013Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)EnvironmentalOpen in IMG/M
2162886007Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
2162886013Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004019Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Iowa-Corn-GraphCirc_030583402140918013SoilMRVRLTRKLAEIVDGVDLRGHEVDEVFDVSAKDAGLLMAEEWAIAERRTADRPHATERRSSSQPNVRDRAANQG
SwRhRL2b_0557.000043302162886007Switchgrass RhizosphereMRVRLTRKLAEAIDGVDLRGHQVDEVFDLSPRDARLLMAEQWAIAERRSADLPHATERRSSSHSDVRDMAADRD
SwBSRL2_0628.000038902162886013Switchgrass RhizosphereCFPSTIMRVRLVRKLAEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG
ICChiseqgaiiFebDRAFT_1418383453300000363SoilRNLYGSRDGYPACFPSSIMRVRLTRKLAEIVDGVDLRGHEVDEVFDVSAKDAGLLMAEEWAIAERRTADRPHATERRSSSQPNVRDRAANQG*
JGI1027J11758_1227200613300000789SoilMRVRLVRKFAENIDGVDLREHEVDEVFDVSPRDARLLLAEEWAIAERRSADLPHGTERRSNSLSGLRQQAADRG*
F14TB_10106817123300001431SoilMRVRLVRKLADKIDGVDLRGHEVDEVFDVSTRDARLLMAEEWAIAERRSADLPHGTERRSSSHSGLRQQAADRA*
soilL1_1003822823300003267Sugarcane Root And Bulk SoilMRVRLTRKLADAIDGVDLRGHQVDEVFDVSPRDARLLMAEEWAIAERRSANLPHSTERRSSSYSAVRDKAADRR*
soilL1_10040760183300003267Sugarcane Root And Bulk SoilMRVRLVRKLAERIDGVDLRGHEVDEVFDVSPREARLLMAEEWAIAERRSADLPHKTERRSTSHSGLTQQAADRG*
soilL2_1018226533300003319Sugarcane Root And Bulk SoilMRVRLTRKLADVIDGVDLRGHEVDEVFDVSPRDARLLMAEDWAIAERRSADLPHASERRSSSYSAVRDKAADRG*
soilH2_1006247323300003324Sugarcane Root And Bulk SoilMRVRLTRKLADLIDGVDLRGHEVDEVLDVSAKDARLLMAEEWAIAERRMADRPHSTERRSSSQPTVRDRAADQG*
soilH2_1022791123300003324Sugarcane Root And Bulk SoilMRVRLTRKLADAIDGVDLRGHQVDEVFDVSPRDARLLMAEEWAIAERRSANLPHSTERRSSSYTAVRDKAADRG*
Ga0055439_1027913923300004019Natural And Restored WetlandsQIMQVRLVRKLAENIDGVDLRGHQVGEVFDVSPRDARLLIAEKWAIAERRSADVPHGTERRSSSHSGLRQEGADRG*
Ga0062593_10001301413300004114SoilMRVRLTRKLAEIVDGVDLRGHEVDEVFDVSAKDAGLLMAEEWAIAERRTADRPHATERRSSSQPNVRDRAANQG*
Ga0062593_10006257543300004114SoilMRVRLVRKLADKIDGVDLRGHQIDEVFDVSPTDARLLMAEEWAIAERRSADLPHRVERRSGSHIDVRDRAADRS*
Ga0062593_10010373723300004114SoilMRVRLTRKLADAIDGVDLRGHEVDEVFDVSPRDARLLMAEEWAIAERRSADLPHSTERRSSSYSEVRDKAADRG*
Ga0062593_10037560723300004114SoilMRVRLVRKFADRIDGVDLRGHEVDEVFDVSLRDARLLMAEEWAIAERRSADLPHGIERRSRSHSDVRQQAADRG*
Ga0062590_10060407433300004157SoilHFLVPEDRQHIRNLYGSRDGYPACFPSSIMRVRLTRKLAEIVDGVDLRGHEVDEVFDVSAKDAGLLMAEEWAIAERRTADRPHATERRSSSQPNVRDRAANQG*
Ga0062594_10010534623300005093SoilMRVRLVRKLAEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG*
Ga0062594_10080545513300005093SoilDGYPACFPSSIMRVRLTRKLAEIVDGVDLRGHEVDEVFDVSAKDAGLLMAEEWAIAERRTADRPHATERRSSSQPNVRDRAANQG*
Ga0065704_10002355123300005289Switchgrass RhizosphereMRVRLTRKLAEAIDGVDLRGHQVDEVFDLSPRDARLLMAEQWAIAERRSADLPHATERRSSSHSDVRDMAADRD*
Ga0065712_1017980533300005290Miscanthus RhizosphereMRVRLVRKFADRIDGVDLQGHEVDEVFDVSPRDARLLMAEEWAIAERRSADLPHGIERRSRSHSDVRQQAADRG*
Ga0065705_1112465913300005294Switchgrass RhizospherePDCFPSTIMRVRLVRKLADRIDGVDLRGHEVDEVFDVSQRDARLLMAEEWAIAERRSADLPHRVERRSSSHNDVRQQAADRG*
Ga0070676_1007048933300005328Miscanthus RhizosphereMRVRLVRKLAEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSSSSLGALRDQAADRG*
Ga0070670_10162470333300005331Switchgrass RhizosphereIDGVDLRGHEVDEVFDVSLRDARLLMAEEWAIAERRSADLPHGIERRSRSHSDVRQQAADRG*
Ga0066388_10098898823300005332Tropical Forest SoilMRVRLVRKLAEKIDGVDLRGHEVDEVLDVSPRDARLLMAEEWAIAERRSADLPHGMERRSSSRSGLRQEAADRG*
Ga0066388_10303155123300005332Tropical Forest SoilMRVRLLRKLADRIDGVDLCGHEVDEVFDVSPRDARLLMAEEWAIAERRSVDLPHRVERRSRSHNDVRQQAADRG*
Ga0066388_10850404423300005332Tropical Forest SoilAVQITATGYRDCFLPKFVRVRLIRKFADCIDGVDLRGHDVDEVFDVSPRDAQLLLAEEWAIAERRAADLPHKSERRSRTHYISRDRAADRG*
Ga0070666_1141663913300005335Switchgrass RhizosphereMRVRLIRKFADRIDGVDLRGHEIDEVFDVSPMDARLLMAEEWAIAERRSVDLPHRVERRSSSHSDVRQQAADRG*
Ga0070682_10033262813300005337Corn RhizosphereMRVRLIRKFADRIDGVDLRGHQVDEVFDVSPMDARLLMAEEWAIAERRSVDLPHRVERRSSSHSDVRQQAADRG*
Ga0070682_10121313613300005337Corn RhizosphereMRVRLLRKLAERIDGVDLRGHEVDEVFDVSARDARLLMAEEWAIAERRSADLPHKTERRSSSHTGLQEQAADRG*
Ga0070660_10133467533300005339Corn RhizosphereIDGVDLRGHQIDEVFDVSPIDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG*
Ga0070689_10034559143300005340Switchgrass RhizosphereRVRLIRKFADRIDGVDLRGHQVDEVFDVSPMDARLLMAEEWAIAERRSVDLPHRVERRSSSHSDVRQQAADRG*
Ga0070692_1014098523300005345Corn, Switchgrass And Miscanthus RhizosphereMRVRLVRKLADKIDGVDLRGHQIDEVFDVSPTDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG*
Ga0070668_10014566773300005347Switchgrass RhizosphereRLVRKLAEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG*
Ga0070673_10063235623300005364Switchgrass RhizosphereMRVRLIRKFADSIDGVDLRNHYVDEVFDVPAKDAHLLLAEQWAIPERRSADLPHKSERRATTHDISRDRAADRG*
Ga0070688_10019701313300005365Switchgrass RhizosphereDCFPSTIMRVRLVRKLAEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG*
Ga0070659_10077148333300005366Corn RhizospherePSTIMRVRLVRKFADRIDGVDLQGHEVDEVFDVSPRDARLLMAEEWAIAERRSADLPHGIERRSRSHSDVRQQAADRG*
Ga0070659_10094657423300005366Corn RhizosphereMRVRLTRKLADAIDGVDLRGHEVDEVFDVSARDARLLMAEEWAIAERRSADLPHKTERRSSSHTGLQEQAADRG*
Ga0070667_10064673223300005367Switchgrass RhizosphereMRVRLVRKLAEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQA
Ga0070703_1060112223300005406Corn, Switchgrass And Miscanthus RhizosphereVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG*
Ga0070694_10025223223300005444Corn, Switchgrass And Miscanthus RhizosphereMRVRLTRKLADAIDGVDLRGHEVDEVFDVPSRDARLLMAEEWAIAERRSADLPHRIERRSSSHEEIRDKAADRR*
Ga0070681_1120888913300005458Corn RhizosphereMRVRLLRKLAERIDGVDLRGHEVDEVFDVSARDARLLMAEEWAIAERRSADLPHKTERRSSSHT
Ga0070685_1074548133300005466Switchgrass RhizosphereEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG*
Ga0070679_10173007023300005530Corn RhizosphereGVDLRGHEVDEVFDVSARDARLLMAEEWAIAERRSADLPHKTERRSSSHTGLQEQAADRG
Ga0070684_10059001213300005535Corn RhizosphereEERAHTHSSALPDGYPDCFPSTIMRVRLVRKLADRIDGVDLRGHEVDEVFDVSPRDARLLMAEEWAIAERRSADLPHGIERRSRSHSDVRQQAADRG*
Ga0070664_10150707713300005564Corn RhizosphereKLAEIVDGVDLRGHEVDEVFDVSAKDAGLLMAEEWAIAERRTADRPHATERRSSSQPNVRDRAANQG*
Ga0068864_10022630443300005618Switchgrass RhizosphereMRVRLIRKFADCIDGVDLRNHYVDEVFDVPAKDAHLLLAEQWAIPERRSADLPHKSERRATTHDISRDRAADRG*
Ga0068864_10037298423300005618Switchgrass RhizosphereVHIFSPAVRLGYPDCFPSTIMRVRLVRKLADRIDGVDLRGHEVDEVFDVSPMDARLLMAEEWAIAERRSVDLPHRVERRSSSHSDVRQQAADRG*
Ga0068864_10044615143300005618Switchgrass RhizosphereFPSTIMRVRLVRKLAEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG*
Ga0068866_1027420943300005718Miscanthus RhizosphereRIDGVDLRGHQVDEVFDVSPMDARLLMAEEWAIAERRSVDLPHRVERRSSSHSDVRQQAADRG*
Ga0066903_10451926613300005764Tropical Forest SoilMRVRLVRKLAEKIDGVDLRGHEVDEVLDVSPRDARLLMAEEWAIAERRSVDLPHGTERRSSSRSGLRQEAADRG*
Ga0068863_10257684223300005841Switchgrass RhizosphereVHIFSPAVRLGYPDCFPSTIMRVRLVRKLADRIDGVDLRGHEVDEVFDVSQRDARLLMAEEWAIAERRSVDLPHRVERRSSSHSDVRQQAADRG*
Ga0068858_10120545713300005842Switchgrass RhizosphereMRVRLVRKFADRIDGVDLRGHEVDEVFDVSPRDARLLMAEEWAIAERRSADLPHGIERRSRSHSDVRQQAAD
Ga0066652_10042589513300006046SoilIDGVDLRGHVVDEVFDVSLKDAQLLMAEQWAIAERRSADLPHKFERRSGSHHISRDRAADRG*
Ga0097621_10067680123300006237Miscanthus RhizosphereMRVRLIRKFADSIDGVDLRNHYVDEVFDIPAKDAHLLLAEQWAIPERRSADLPHKSERRATTHDISRDRAADRG*
Ga0068871_10008356923300006358Miscanthus RhizosphereMRVRLIRKFADRIDGVDLRGHEVDEVFDVSPMDARLLMAEEWAIAERRSVDLPHRVERRSSSHSDVRQQAADRG*
Ga0079220_1209147523300006806Agricultural SoilMRVRLLRKLAERIDGVDLRGHEVDEVFDVSARDARLLMAEEWAIAERRSADLPHKTERRSSSHTGLQ
Ga0075433_1004670313300006852Populus RhizosphereMRVRLVRKLAEKIDGVDLRGHEVDEVFDVSPRDARLLMAEEWAIAERRSADLPHGTERRSSSYSGLRQEAADRS*
Ga0075434_10079257223300006871Populus RhizosphereLGIQIAFHPGIMRVRLIRKFADCIDGVDLRGHVVDEVFDVPLKDAQLLMAEQWAIPERRSADLPHRFERRSGSHQISRDRAADRG*
Ga0075434_10108258923300006871Populus RhizosphereMSAIGIEIAFYPKIMRVRLVRKFADCIDGVDLRGHDVDEVLDVSPRDAQLLLAEEWAIAERRSADLPHKSER
Ga0075424_10016036733300006904Populus RhizosphereMRVRLTRKLADVIDGIDLRGHDVDEVFDVSPRDARLLMAEEWAIAERRSADLPHANERRSHSHGVGLDKAADRD*
Ga0075424_10184679033300006904Populus RhizosphereIDGVDLRGHEVDEVFDVSARDARLLMAEEWAIAERRSADLPHKTERRSSSHTGLQEQAADRG*
Ga0075436_10019753713300006914Populus RhizosphereHPGIMRVRLIRKFADCIDGVDLRGHVVDEVFDVPLKDAQLLMAEQWAIPERRSADLPHRFERRSGSHQISRDQAADRG*
Ga0079219_1010657913300006954Agricultural SoilMRVRLIRKFADRIDGVDLRGHEVDEVFDVSPTDARLLMAEEWAIAERRSVDLPHRVERRYNSHSDVRQQAADRG*
Ga0075435_10006615853300007076Populus RhizosphereMSAIGIEIAFYPKIMRVRLVRKFADCIDGVDLRGHDVDEVLDVSPRDAQLLLAEEWAIAERRSADLPHKSERRASTHHISRDRAAHRG*
Ga0111539_1349128713300009094Populus RhizosphereSTIMRVRLVRKLAERIDGVDLRGHEVDEVFDLPPTDARLLMAEEWAIAERRSADLPHKTERRASSHSGLIQQAADRG*
Ga0075418_1024029143300009100Populus RhizosphereMRVRLTRKLADAIDGVDLRGHEVDEVFDVSTRDARLLMAENWAIAERRSADLPHKTERRASSHGDVRDLAADRG*
Ga0075418_1048374723300009100Populus RhizosphereMRVRLVRKLAEEIDGVDLRGHQVDEVFEVSPTDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG*
Ga0075418_1289232623300009100Populus RhizosphereMRVRLTRKLADTIDGVDLRGHQVDEVFDVSPRDARLLMAEEWAIAERRSADLPHMTERRSSSHSVALDKAA
Ga0114129_1021954653300009147Populus RhizosphereMRVRLTRKLADAIDGVDLRGHEVDEVFDVSTRDACLLMAEDWAIAERRSADLPHKTERRASSHGAVRDLAADRG*
Ga0105243_1006612143300009148Miscanthus RhizosphereMRVRLVRKLAEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSGSHIDVRDRAADRS*
Ga0111538_1024497213300009156Populus RhizosphereINDPSRSTFGYRDCFPSTIMRVRLVRKLAERIDGVDLRGHEVDEVFDLPPTDARLLMAEEWAIAERRSADLPHKTERRASSHSGLIQQAADRG*
Ga0111538_1037109333300009156Populus RhizosphereMRVRLVRKLAEEIDGVDLRGHQVDEVFEVSPTDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVRDQAADRG*
Ga0105248_1025157523300009177Switchgrass RhizosphereMRVRLVRKFADRIDGVDLQGHEVDEVFDVSPRDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG*
Ga0105238_1153026933300009551Corn RhizosphereRTVHMSAFGIEIAFYQKIMRVRLIRKFADCIDGVDLRGHDVDEVLDVSPRDAQLLLAEEWAIAERRSADLPHKSERRASTHHISRDRAAHRG*
Ga0105249_1016363213300009553Switchgrass RhizosphereMRVRLVRKLAEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRS
Ga0126314_1127608323300010042Serpentine SoilMRVRLVHKFADCIDGVDLSGHHVDDVFDVPPREARLLLAEKWAVPERRVADLPHKAERRSSFQCRVRDHAPDRG*
Ga0126310_1126328723300010044Serpentine SoilMRVRLVHKFADCIDGVDLSGHHVDEVFDVPPKDARLLLAEKWAVPERRVADLPHKGERRSSVHCRVRDHAPDRG*
Ga0126382_1121138823300010047Tropical Forest SoilMRVRLVRKLADRIDGVDLRGREVDEVFDVSPRDARLLMAEEWAIAERRSADLPHRVERRSNSHNDVRQQAADRG*
Ga0126370_1055274023300010358Tropical Forest SoilMRATGYRDCFLSKFVRVRLIRKFADCIDGVDLRGHNVDEVFDVSQRDAQLLLAEEWAIAERRAADLPHKSERRSRTHYISRDRAADRG*
Ga0126372_1227109323300010360Tropical Forest SoilIDGVDLRGHEVDEVLDVSPRDARLLMAEEWAIAERRSVDLPHGTERRSSSRSGLRQEAADRG*
Ga0126372_1320670813300010360Tropical Forest SoilMRATGYRDCFLSKFMRVRLIRKFADCIDGVDLRGHNVDEVFDVSQRDAQLLLAEEWAIAERRAADLPHKSERRSRTHYISRDRAADRG*
Ga0126377_1003272273300010362Tropical Forest SoilMRVRLVRKLADRIDDVDLRGREVDEVFDVSPRDARLLMAEEWAIAERRSADLPHRVERRSNSHNDVRQHAADRG*
Ga0134127_1000321163300010399Terrestrial SoilMRVRLTRKLADAIDGVDLRGHDVDEVFDVSPRDARLLMAEEWAIAERRSANLPHSTERRSSSQDVVRDRAADHD*
Ga0134127_1134368713300010399Terrestrial SoilMRVRLTRKLAEIVDGVDLRGHEVDEVFDVSAKDAGLLMAEEWAIAERRTADRPHATERRSSS
Ga0105246_1080076923300011119Miscanthus RhizosphereMRVRLVRKLAEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSSSPG
Ga0126375_1160446723300012948Tropical Forest SoilMRVRLIRKLADRIDDVDLRGHEVDEVFDVSPRDARLLVAEEWAIAERRSVDLPHRVERRSSSHSNVRQQAADRG*
Ga0164300_1047446023300012951SoilMRVRLVRKLADRIDGVDLRGHEVDEVFDVSPKEARLLMAEEWAIAERRSADLPHKTERRSSAHSPLTQQAADRG*
Ga0164298_1035140833300012955SoilMSAIGIEIAFYPKIMRVRLIRKFADCIDGVDLRGHDVDEVLDVSPRDAQLLLAEEWAIAERRSADLPHKSERRSSTHHISRDRAAHRG*
Ga0164299_1018049023300012958SoilMSAIGIEIAFYPKIMRVRLVRKFADCIDGVDLRGHDVDEVLDVSPRDAQLLLAEEWAIAERRSADLPHKSERRSSTHHISRDRAAHRG*
Ga0164302_1156150623300012961SoilMSAIGIEIAFYPKIMRVRLIRKFADCIDGVDLRGHDVDEVLDVSPRDAHLLLAEEWAIAERRSADLPHKSERRSSTHHIS
Ga0126369_1282918913300012971Tropical Forest SoilTGYRDCFLSKSVRVRLIRKFADCIDGVDLRGHNVDEVFDVSQRDAQLLLAEEWAIAERRAADLPHKSERRSRTHYISRDRAADRG*
Ga0164304_1056320613300012986SoilMSAIGIEIAFYPKIMRVRLIRKFADCIDGVDLRGHDVDEVLDVSPRDAQLLLAEEWAIAERRSADLPHKSERRSST
Ga0157378_1010077753300013297Miscanthus RhizosphereLGIQIAFHPGIMRVRLIRKFADCIDGVDLRGHVVDEVFDVSPKDAQLLMAEQWAIAERRSADLPHKFERRAGSHHISRDRAADRG*
Ga0157372_1254347913300013307Corn RhizosphereMRVRLVRKLADKIDGVDLRGHQIDEVFDVSPTDARLLMAEEWAIAERRSADLPHRVERRSGSHIVVRDRAAD
Ga0157375_10002024193300013308Miscanthus RhizosphereLDCFPSTIMRVRLVRKLAEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG*
Ga0157375_1066508613300013308Miscanthus RhizosphereDCIDGVDLRGHDVDEVLDVSPRDAQLLLAEEWAIAERRSADLPHKSERRASTHHISRDRAAHRG*
Ga0132258_1125193223300015371Arabidopsis RhizosphereMRVRLVRKLADRIDGVDLRGHEVDEVFDVSPRDARLLMAEEWAIAERRSADLPHRIERRSRSHSDVRQQAADRG*
Ga0173482_1022649033300019361SoilMRVRLVRKLADRIDGVDLRGHEVDEVFDVSSRDARLLMAEEWAIAERRSVDLPHRVERRSSSHSDVRQQAADRG
Ga0182009_1014908833300021445SoilPIGLEIAFYPQIMRVRLIRKFADSIDGVDLRNHYVDEVFDVPAKDAHLLLAEQWAIPERRSADLPHKSERRATTHDISRDRAADRG
Ga0207688_1039530723300025901Corn, Switchgrass And Miscanthus RhizosphereMRVRLVRKLADKIDGVDLRGHQIDEVFDVSPTDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG
Ga0207647_1020618923300025904Corn RhizosphereMRVRLVRKLAEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG
Ga0207645_1001569753300025907Miscanthus RhizosphereLVRKLAEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSSSSLGALRDQAADRG
Ga0207645_1068066023300025907Miscanthus RhizosphereMRVRLVRKFADRIDGVDLQGHEVDEVFDVSPRDARLLMAEEWAIAERRSADLPHGIERRSRSHSDVRQQAADRG
Ga0207643_1019802813300025908Miscanthus RhizosphereRVRLVRKFADRIDGVDLRGHEVDEVFDVSLRDARLLMAEEWAIAERRSADLPHGIERRSRSHSDVRQQAADRG
Ga0207643_1063860113300025908Miscanthus RhizosphereMRVRLVRKLADKIDGVDLRGHQIDEVFDVSPTDARLLMAEEWAIAERRSADLPHRVERRSGSHIDVRDRAADRS
Ga0207649_1168289113300025920Corn RhizosphereMRVRLLRKLAERIDGVDLRGHEVDEVFDVSARDARLLMAEEWAIAERRSADLPHRVERRSSSHSDVSQQAADR
Ga0207652_1152650613300025921Corn RhizosphereVDLRGHEVDEVFDVSARDARLLMAEEWAIAERRSADLPHKTERRSSSHTGLQEQAADRG
Ga0207659_1000303893300025926Miscanthus RhizosphereMRVRLVRKFADRIDGVDLRGHEVDEVFDVSLRDARLLMAEEWAIAERRSADLPHGIERRSRSHSDVRQQAADRG
Ga0207687_1150336713300025927Miscanthus RhizosphereMRVRLVRKLAEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHKTERRSSSHTGLQEQAADRG
Ga0207701_1153740013300025930Corn, Switchgrass And Miscanthus RhizosphereMRVRLLRKLAERIDGVDLRGHEVDEVFDVSARDARLLMAEEWAIAERRSADLPHKTERRSSSHTGLQEQAADRG
Ga0207690_1136885213300025932Corn RhizosphereFPSTIMRVRLVRKFADRIDGVDLQGHEVDEVFDVSPRDARLLMAEEWAIAERRSADLPHGIERRSRSHSDVRQQAADRG
Ga0207706_1022236513300025933Corn RhizosphereLVRKLAEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG
Ga0207706_1056699413300025933Corn RhizosphereMRVRLVRKLADKIDGVDLRGHQIDEVFDVSPTDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVS
Ga0207686_1032105423300025934Miscanthus RhizosphereMRVRLTRKLADAIDGVDLRGHEVDEVFDVPSRDARLLMAEEWAIAERRSADLPHRIERRSSSHEEIRDKAADRR
Ga0207679_1051454213300025945Corn RhizosphereKLAEIVDGVDLRGHEVDEVFDVSAKDAGLLMAEEWAIAERRTADRPHATERRSSSQPNVRDRAANQG
Ga0207651_1007296023300025960Switchgrass RhizosphereMRVRLIRKFADRIDGVDLRGHQVDEVFDVSPMDARLLMAEEWAIAERRSVDLPHRVERRSSSHSDVRQQAADRG
Ga0207651_1027058733300025960Switchgrass RhizosphereMRVRLIRKFADSIDGVDLRNHYVDEVFDVPAKDAHLLLAEQWAIPERRSADLPHKSERRATTHDISRDRAADRG
Ga0207668_1004249853300025972Switchgrass RhizosphereMRVRLVRKLADEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG
Ga0207708_1012048513300026075Corn, Switchgrass And Miscanthus RhizosphereMRVRLVRKFADRIDGVDLQGHEVDEVFDVSPRDARLLMAEEWAIAERRSADLPHRIERRSRSHSDVR
Ga0207641_1148902823300026088Switchgrass RhizosphereMRVRLVRKLADRIDGVDLRGHEVDEVFDVSQRDARLLMAEEWAIAERRSADLPHRVERRSSSHNDVRQQAADRG
Ga0207641_1264304823300026088Switchgrass RhizosphereYPDCFPSPIMRVRLIRKFADRIDGVDLRGHEVDEVFDVSPMDARLLMAEEWAIAERRSVDLPHRVERRSSSHSDVRQQAADRG
Ga0207676_1195956113300026095Switchgrass RhizosphereMRVRLIRKFADCIDGVDLRNHYVDEVFDVPAKDAHLLLAEQWAIPERRSADLPHKSERRATTHDISRDRAADRG
Ga0209177_1042210513300027775Agricultural SoilTGGGYPDCFPSTIMRVRLLRKLAERIDGVDLRGHEVDEVFDVSARDARLLMAEEWAIAERRSADLPHKTERRSSSHTGLQEQAADRG
Ga0310813_1084454313300031716SoilMQVRLVRKLADRIDGVDLRGHEVDEVFDVSPRDARLLMAEEWAIAERRFADLPHRIERRSRSHSDVRQQAADRG
Ga0307468_10094599413300031740Hardwood Forest SoilMRVRLTRKLADAIDGVDLRGHEVDEVFDVSTRDARLLMAEDWAIAERRSVDLPHKTERRASSHDAVRDLAADRG
Ga0310892_1031932423300031858SoilVHIFSPAVRLGYPDCFPSTIMRVRLVRKLAEEIDGVDLRGHHVDEVFEASPKDARLLMAEEWAIAERRSADLPHRVERRSSSPGAVSDQAADRG
Ga0310900_1009887623300031908SoilVHIFSPAVRLGYPDCFPSTIMRVRLVRKLADRIDGVDLRGHEVDEVFDVSQRDARLLMAEEWAIAERRSADLPHRVERRSSSHNDVRQQAADRG
Ga0310885_1010994713300031943SoilMRVRLVRKLADRIDGVDLRGHEVDEVFDVSPRDAGLLMAEEWAIAERRSADLPHRVERRSSSHNDVRQQAADRG
Ga0310897_1064093513300032003SoilVLEDRVHIFSPAVRLGYPDCFPSTIMRVRLVRKLADRIDGVDLRGHEVDEVFDVSQRDARLLMAEEWAIAERRSADLPHRVERRSSSHNDVRQQAADRG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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