NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F062975

Metagenome / Metatranscriptome Family F062975

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F062975
Family Type Metagenome / Metatranscriptome
Number of Sequences 130
Average Sequence Length 69 residues
Representative Sequence RPAIDQKIETEIPSEVRRSIHGEQARREVVIRPEVPRGTSLRNRANENCAPENQHQKNIPREAVF
Number of Associated Samples 116
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 23.85 %
% of genes near scaffold ends (potentially truncated) 70.77 %
% of genes from short scaffolds (< 2000 bps) 89.23 %
Associated GOLD sequencing projects 110
AlphaFold2 3D model prediction Yes
3D model pTM-score0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.077 % of family members)
Environment Ontology (ENVO) Unclassified
(27.692 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.923 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 4.30%    β-sheet: 0.00%    Coil/Unstructured: 95.70%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.15
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 130 Family Scaffolds
PF04773FecR 7.69
PF03167UDG 1.54
PF03544TonB_C 0.77
PF04015DUF362 0.77
PF00534Glycos_transf_1 0.77
PF14023DUF4239 0.77
PF13579Glyco_trans_4_4 0.77

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 130 Family Scaffolds
COG0692Uracil-DNA glycosylaseReplication, recombination and repair [L] 1.54
COG1573Uracil-DNA glycosylaseReplication, recombination and repair [L] 1.54
COG3663G:T/U-mismatch repair DNA glycosylaseReplication, recombination and repair [L] 1.54
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.77
COG2006Uncharacterized conserved protein, DUF362 familyFunction unknown [S] 0.77

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090014|GPIPI_16851475All Organisms → cellular organisms → Bacteria2209Open in IMG/M
2088090014|GPIPI_17078539All Organisms → cellular organisms → Bacteria1141Open in IMG/M
2170459023|GZGNO2B02JD766All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300000955|JGI1027J12803_101048918All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300000956|JGI10216J12902_103209864All Organisms → cellular organisms → Bacteria1658Open in IMG/M
3300001431|F14TB_102106259All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium693Open in IMG/M
3300002568|C688J35102_120020487All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300004114|Ga0062593_100637301All Organisms → cellular organisms → Bacteria1025Open in IMG/M
3300004157|Ga0062590_100088904All Organisms → cellular organisms → Bacteria1907Open in IMG/M
3300005175|Ga0066673_10329335All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300005175|Ga0066673_10772826All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300005181|Ga0066678_10437914All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300005293|Ga0065715_10322412All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300005294|Ga0065705_10047464All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2060Open in IMG/M
3300005294|Ga0065705_10144221All Organisms → cellular organisms → Bacteria2078Open in IMG/M
3300005338|Ga0068868_101943688All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300005438|Ga0070701_11037528All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300005439|Ga0070711_101302062All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300005439|Ga0070711_101765730All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300005441|Ga0070700_101178281All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300005445|Ga0070708_101092674All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300005455|Ga0070663_100911785All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300005457|Ga0070662_101453574All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300005458|Ga0070681_10094435All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2939Open in IMG/M
3300005466|Ga0070685_10306452All Organisms → cellular organisms → Bacteria1072Open in IMG/M
3300005468|Ga0070707_100905074All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium847Open in IMG/M
3300005544|Ga0070686_100236127All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1329Open in IMG/M
3300005560|Ga0066670_10217285All Organisms → cellular organisms → Bacteria1152Open in IMG/M
3300005566|Ga0066693_10030452All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1702Open in IMG/M
3300005598|Ga0066706_10420887All Organisms → cellular organisms → Bacteria1063Open in IMG/M
3300005616|Ga0068852_100738896All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300005764|Ga0066903_100141301All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium3426Open in IMG/M
3300005842|Ga0068858_100011151All Organisms → cellular organisms → Bacteria8496Open in IMG/M
3300005843|Ga0068860_101522343All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300006046|Ga0066652_100520556All Organisms → cellular organisms → Bacteria1108Open in IMG/M
3300006175|Ga0070712_100040922All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3179Open in IMG/M
3300006797|Ga0066659_10870534All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300006854|Ga0075425_101125345All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia894Open in IMG/M
3300009094|Ga0111539_11234976All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300009148|Ga0105243_11152937All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300009792|Ga0126374_10684155All Organisms → cellular organisms → Bacteria769Open in IMG/M
3300010043|Ga0126380_10941162All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia722Open in IMG/M
3300010044|Ga0126310_10768682All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300010045|Ga0126311_11477926All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300010047|Ga0126382_11978767All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300010154|Ga0127503_10103072All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300010154|Ga0127503_10899390All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300010358|Ga0126370_10330423All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1223Open in IMG/M
3300010362|Ga0126377_10815227All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300010366|Ga0126379_10572220All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300010376|Ga0126381_102359897All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300010397|Ga0134124_10127420All Organisms → cellular organisms → Bacteria2247Open in IMG/M
3300010398|Ga0126383_10220403All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1838Open in IMG/M
3300011444|Ga0137463_1097347All Organisms → cellular organisms → Bacteria1107Open in IMG/M
3300012198|Ga0137364_10715598All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300012208|Ga0137376_10170529All Organisms → cellular organisms → Bacteria1877Open in IMG/M
3300012212|Ga0150985_105084087All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300012285|Ga0137370_10401067All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300012512|Ga0157327_1068110All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300012685|Ga0137397_10556306All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300012891|Ga0157305_10097512All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300012903|Ga0157289_10128691All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300012913|Ga0157298_10107121All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300012916|Ga0157310_10246682All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300012930|Ga0137407_10365032All Organisms → cellular organisms → Bacteria1332Open in IMG/M
3300012977|Ga0134087_10392558All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300012986|Ga0164304_11398436All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300012986|Ga0164304_11437433All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300013306|Ga0163162_11817498All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300013308|Ga0157375_10099524All Organisms → cellular organisms → Bacteria2987Open in IMG/M
3300013308|Ga0157375_10971372All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300014166|Ga0134079_10406994All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium634Open in IMG/M
3300014969|Ga0157376_10299892All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1521Open in IMG/M
3300015373|Ga0132257_100283006All Organisms → cellular organisms → Bacteria1988Open in IMG/M
3300016371|Ga0182034_12081892All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300016404|Ga0182037_11723813All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300016445|Ga0182038_10624877All Organisms → cellular organisms → Bacteria932Open in IMG/M
3300016445|Ga0182038_11671714All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300016445|Ga0182038_11701759All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium568Open in IMG/M
3300018000|Ga0184604_10037778All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300018027|Ga0184605_10249608All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300018067|Ga0184611_1007325All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2992Open in IMG/M
3300018073|Ga0184624_10334927All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300018073|Ga0184624_10371193All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300018081|Ga0184625_10061942All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1888Open in IMG/M
3300018468|Ga0066662_10806859All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium911Open in IMG/M
3300018482|Ga0066669_10241491All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1420Open in IMG/M
3300018482|Ga0066669_11162967All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300019789|Ga0137408_1044005All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300019868|Ga0193720_1042831All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300020012|Ga0193732_1021909All Organisms → cellular organisms → Bacteria1106Open in IMG/M
3300020018|Ga0193721_1007390All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2873Open in IMG/M
3300020062|Ga0193724_1031388All Organisms → cellular organisms → Bacteria1132Open in IMG/M
3300020069|Ga0197907_10326346All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300021080|Ga0210382_10118344All Organisms → cellular organisms → Bacteria1116Open in IMG/M
3300021510|Ga0222621_1033725All Organisms → cellular organisms → Bacteria1057Open in IMG/M
3300021560|Ga0126371_11418608All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300022467|Ga0224712_10662494All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300022756|Ga0222622_10800420All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium688Open in IMG/M
3300024283|Ga0247670_1027822All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300025271|Ga0207666_1000151All Organisms → cellular organisms → Bacteria10742Open in IMG/M
3300025315|Ga0207697_10001918All Organisms → cellular organisms → Bacteria11072Open in IMG/M
3300025315|Ga0207697_10066050All Organisms → cellular organisms → Bacteria1510Open in IMG/M
3300025916|Ga0207663_10685278All Organisms → cellular organisms → Bacteria811Open in IMG/M
3300025916|Ga0207663_11638115All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300025921|Ga0207652_11827461All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300025936|Ga0207670_10040697All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium3051Open in IMG/M
3300025942|Ga0207689_11355890All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300026023|Ga0207677_11399725All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300026078|Ga0207702_11839003All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300026314|Ga0209268_1150846All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300026316|Ga0209155_1070206All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1325Open in IMG/M
3300026557|Ga0179587_10205294All Organisms → cellular organisms → Bacteria1250Open in IMG/M
3300028709|Ga0307279_10056340All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300028793|Ga0307299_10146553All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium888Open in IMG/M
3300028814|Ga0307302_10631956All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300028828|Ga0307312_11015472All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300028876|Ga0307286_10249562All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300031099|Ga0308181_1144809All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300031469|Ga0170819_12487542All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300031545|Ga0318541_10548267All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300031879|Ga0306919_11243082All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300031912|Ga0306921_10765705All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300031912|Ga0306921_12620678All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300031941|Ga0310912_10297855All Organisms → cellular organisms → Bacteria1248Open in IMG/M
3300031943|Ga0310885_10327016All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300032076|Ga0306924_10416257All Organisms → cellular organisms → Bacteria1538Open in IMG/M
3300032261|Ga0306920_103729039All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium559Open in IMG/M
3300033412|Ga0310810_10808545All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300033551|Ga0247830_10604817All Organisms → cellular organisms → Bacteria868Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.08%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.69%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.92%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.92%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.38%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.62%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.31%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.31%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.31%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil1.54%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.54%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.54%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.54%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.54%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.54%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.54%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.54%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.54%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.54%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.77%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.77%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.77%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.77%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.77%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.77%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.77%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.77%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.77%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090014Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
2170459023Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)EnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012512Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510Host-AssociatedOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012891Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2EnvironmentalOpen in IMG/M
3300012903Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012916Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019868Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300024283Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11EnvironmentalOpen in IMG/M
3300025271Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300028709Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300031099Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPIPI_017758302088090014SoilTEIPSEVRYSIHDEAARRVVISSEITGTSLRNSADENSKRQHQKNILREAVF
GPIPI_032491802088090014SoilTLYEVRHRPAIDLKIETEIPPEVRCSIHGETAKRDVIRPEVTSTSLRNSADENCAPRSQHQKNIPNEAAF
FA3_013039302170459023Grass SoilIETEIPSEVWRSIHGEQARREVVIRPEVPRGTSLRNRADENCAPKNQHQKNIPREAVF
JGI1027J12803_10104891813300000955SoilDLKIETEIPPEVRCSIDREAARRNVIRPEVTRPSLRNTADENCAPKNEHQKNIPREGVF*
JGI10216J12902_10320986423300000956SoilMRPRWEPRAIAVALRDVRHRPAIDLKIESEIPSEVRYSIHDEAARRVVIRAQVSGASLRSSADENCAPKRQHQKNIAREAVF*
F14TB_10210625933300001431SoilETEIPSEVRRSIHDKAARREVMIRPEVPTGAFSLPNSADENCASENQHQKNIPREAVF*
C688J35102_12002048733300002568SoilMRSNWEPGVIAVPLGDAPHRPPIDQKIETEIPSEVWRSIHDDVAGREVVIRPEVPGSGVSLRNTADENCAPEDQRQKNIRREAVF*
Ga0062593_10063730113300004114SoilGDGQHVRPSRQQGGIAVTLHDTSYRSTIDLKRETKIPSEVRNSVDGEATRREVMVRAEVSRRTALRNSADENCAPKNQHQKNIPREAVF*
Ga0062590_10008890413300004157SoilRSTIDLKRETKIPSEVRNSVDGEATGRVVMIRAEVPRWTTLRDSADENRAPKNQHQKNIPREAVFCFHGRYCSH*
Ga0066673_1032933523300005175SoilMETEIPAEVRRSVDGEAARREVVIRPKVTSTSMRNRANEHCAPENRHQKNIPREAEF*
Ga0066673_1077282623300005175SoilDAPCRPAIDLKIETEIPSEVRHSVHGEAARRVVMIRPEVPRSGFSLRNSADETCAPNNQHQKNIPREAVF*
Ga0066678_1043791423300005181SoilPHRPAIDLKIETEIPPEVWHSIHDDAARRVVVISPEVTRPGTSLHNSADENCAPKNQHQKNIPREAVF*
Ga0065715_1032241213300005293Miscanthus RhizosphereAIDLKIETEIPSEVRRSIDDKPARRVVVIRPEVAAVLSLRNSTDKNCASKNQHQKSIPREAVF*
Ga0065705_1004746433300005294Switchgrass RhizosphereMRPSWEPGGIPATLYDARHRPAIDLKIETEIPSEVRRSIYDEPARREVVIRPEVPRWGASLRNSADEDCAPKNQHHKNICEAVF*
Ga0065705_1014422133300005294Switchgrass RhizosphereVTLGDASHGRAIDQKIETEIPSEVRRSIHDEPARRVVVIGPEVPWRLSLRNSADGYCAPKNQHQKNIPREAVF*
Ga0068868_10194368813300005338Miscanthus RhizosphereHRPAIDQEIETKIPSEVRRSIHDDVARREVVIRPEIPGRATSLRNTADPNCAPENQHQKNIPREAVF*
Ga0070701_1103752813300005438Corn, Switchgrass And Miscanthus RhizosphereIPSEVRRSIHNDVPRREVMIRPEVPGWATSLRNTADANCAPENQHQKNIPREGVF*
Ga0070711_10130206223300005439Corn, Switchgrass And Miscanthus RhizosphereVTICDGRYRPAIDLEIKTDIPSEVRRSIHDDAARREVVITPEVPRGTSLRNSADENCAPENQHQKNVPREAVF*
Ga0070711_10176573023300005439Corn, Switchgrass And Miscanthus RhizosphereNRPAIDQKIETEIPSEVRRSIHGEQARREVVIRPEVPRGTSLRNRANENCAPENQHQKNIPREAVF*
Ga0070700_10117828113300005441Corn, Switchgrass And Miscanthus RhizosphereAIAVSLDDAPNRPAIDQKTETDIPSEVRRSIHGEQSRREVVIRPDVPRRTSLRNSADENCAPENQHQKNIPREAVF*
Ga0070708_10109267413300005445Corn, Switchgrass And Miscanthus RhizospherePGAKGVTLCDARHRPAIDLKLVTQIPSEIRRSIDSEAPRWNVRRVEVTRASLRKSANEHCASENQHQKNIREAVF*
Ga0070663_10091178523300005455Corn RhizosphereDAPNRPAIDQKTETDIPSEVRRSIHGEQSRREVVIRPDVPRRTSLRNSADENCAPENQHQKNIPREAVF*
Ga0070662_10145357433300005457Corn RhizosphereAIDQKIETEIPSEVRRSIHDEPARRVVVIGPEVPWRLSLRNSADGYCAPKNQHQKNIPREAVF*
Ga0070681_1009443553300005458Corn RhizosphereTEIPSEVRRSIHDEKARREVVIRPEVRRWRAALRNTANENCAPENQHQKNIPREAVF*
Ga0070685_1030645213300005466Switchgrass RhizosphereTIDLKRKAKIPSEVRNSVDGEATRREVMVRAQVPRRTALRNSADENCAPKNQHQKNIPREAVF*
Ga0070707_10090507413300005468Corn, Switchgrass And Miscanthus RhizosphereRYRPAIDLEIETDIPCEVRHSIHDDAARREVMIRPEVPSWGTSSRNSADENCAPKNQHQKNISCEAMF*
Ga0070686_10023612713300005544Switchgrass RhizosphereIETEIPSEVRRSIHDEKARREVVIRPEVRRWRTALRNTANENCAPENQHQKNIPREAVF*
Ga0066670_1021728533300005560SoilMETEIPAEVRRSVDGEATRREVVIRPEVTSTSMRNRANEHCAPENRHQKNIPREAEF*
Ga0066693_1003045223300005566SoilMETEIPAEVRRSVDGEAARREVVIRPEVTSTSMRNRANEHCAPENRHQKNIPREAEF*
Ga0066706_1042088733300005598SoilHRPAIDLKIETEIPSEVRHSIHDEAARREVVITPEVPRGTSLRNSADENCAPENQHQKNIPREAVF*
Ga0068852_10073889633300005616Corn RhizosphereVPLRDAAHRPAIDQEIETEIPSEVRRSIHDEKARREVVIRPEVRRWRTALRNTANENCAPENQHQKNIPREAVF*
Ga0066903_10014130133300005764Tropical Forest SoilVAAQYDVRHRPAIDLKMEPEIPSEVRYSIDSDAAGWDVISPEVTSTSLRKSANEHCAPENQHQKNIPNEAVF*
Ga0068858_10001115133300005842Switchgrass RhizosphereVTLCDARHRPAIDLKLVTQIPSEIRRSIDSEAPRWNVRRVEVTRASLRKSANEHCASENQHQKNIREAVF*
Ga0068860_10152234313300005843Switchgrass RhizosphereKTETDIPSEVRRSIHGEQARREVVIRPDVPRRTSLRNSADENCAPENQHQKNIPREAVF*
Ga0066652_10052055633300006046SoilIDLKIETEIPSEVRHSIHDEAARREVVITPEVPRGTSLRNSADENCAPENQHQKNIPREAVF*
Ga0070712_10004092243300006175Corn, Switchgrass And Miscanthus RhizosphereVSLGDAPNRPAIDQKIETEIPSEVRRSIYGDAARWEVVIRPEVRWGTSLRNNADENCAPENQHQKNIPHEAVF*
Ga0066659_1087053413300006797SoilHMGPRWEPGAIAVALREGRHGPAVDLKSETEIPSEVRRSIYGEAARREVMIRPEVPTGAFSLRNSADKNCASENQHQKNIPREAVF*
Ga0075425_10112534523300006854Populus RhizosphereIPSEVRRSIDGEAARREVTGPEVTSTSLRKSANEHSAPENQHQKTNSR*
Ga0111539_1123497613300009094Populus RhizosphereQGGVAVTLHHTSYRPTIDLKRETNIPSEVRNSVDGEATRREVMVRAQVPRRTALRNSADENCAPKNQHQKNIPREAVF*
Ga0105243_1115293713300009148Miscanthus RhizosphereISSEVRGSIHNDVARREVVIKPEIPGRAASLRNTADPNCAPENQHQKNIPREAVF*
Ga0126374_1068415513300009792Tropical Forest SoilLTIDLKIETEIPSEVRRSIDSEDARGEVIIRPEVPRGTSLRNRTNESCAPENQDQKNIREDEF*
Ga0126380_1094116213300010043Tropical Forest SoilAIDLKMETEIPSEVRGSIDGEAARRDVTGPEVTAPLCKGANEHCAPENQHQKNNSR*
Ga0126310_1076868213300010044Serpentine SoilMGPRWKPGAIAVALREGRHGPAVDLKSETEIPSEVRRSIYGEAARREVMIRPEVPTRAFSMRNTADKNRASENQHQKNIPREAVF*
Ga0126311_1147792613300010045Serpentine SoilVTLGDAPHRPAIDQKIETEIPSEVRRSIDDDAARREVVIRPEVPTRAFSLRNSADENCGSKNQHQKNIPREAVF*
Ga0126382_1197876713300010047Tropical Forest SoilETEIPSEVRRSIDGEAARRDVISSEVTSASLRKSANEHCASENQHQKNIREAVF*
Ga0127503_1010307213300010154SoilVTLCDVRHGPAIDLEIESEIPSEVRHSIHDEAARREVVIRPEVPTWGTSLHNCADENCAPKNQRQKNNAREAV
Ga0127503_1089939013300010154SoilMETEIPSKVRRSIDGEAASWVIRPEVTNTSLRKSANEHCAPENQHQKNI
Ga0126370_1033042323300010358Tropical Forest SoilMRPGGQQSGIAATEYDISHRPAVDLKMETEIPSEVRRSIDCEATGRDVISPEVTGTSLRKSANEHCAPENQHQKNIAREAVF*
Ga0126377_1081522733300010362Tropical Forest SoilMRPRWQLGGIPATLYDACHGLAVDLKMETEIPSEVRRSVDGESARRDVIRPEVTSTSLRESANEHCAPENQHQKNIPNEAVF*
Ga0126379_1057222033300010366Tropical Forest SoilIVATEYDISHRPAVDLKMETEIPSEVRCSIDREAAKWVIRPEVTSTSLRKSANEHCAPENQRQKNIPNEAVF*
Ga0126381_10235989713300010376Tropical Forest SoilMETEIPSEVRCSIDGEAASWVIRPEVTNTSLRKSANEHCAPENQHQKN
Ga0134124_1012742013300010397Terrestrial SoilPSRQQGGITVTLHDTSYRPTIDLKRKAKIPSEVRNSVDGEATRREVMVRAQVPRRTALRNSADENCAPKNQHQKNIPREAVF*
Ga0126383_1022040333300010398Tropical Forest SoilMESEIPSEVRRPIDGEAARRDVISSEVTSASLRKSANEHCASENQHQKN
Ga0137463_109734713300011444SoilEGRHGPAIDLKIETEIPSEVRRSIYGEAARRDVTRPEVTSPGTSLRNGANENCAPKNQHQKNIPREAVF*
Ga0137364_1071559823300012198Vadose Zone SoilMGPRWEPGAIAVALREGRHGPAVDLKSETEIPSEVRRSIYGEAARREVMIRPEVPTGAFSLRNSADKNCASKNQHQKNIPREAVF*
Ga0137376_1017052923300012208Vadose Zone SoilVALREGRHGPAVDLKSETEIPSEVRRSIYGEAARREVMIRPEVPTGAFSLRNNADKNCASENQHQKNIPREAVF*
Ga0150985_10508408713300012212Avena Fatua RhizosphereLGDAPHRPPIDQKIETEIPSEVWRSIHDDVAGREVVIRPEVPGSGVSLRNTADENCAPEDQRQKNIRREAVF
Ga0137370_1040106723300012285Vadose Zone SoilQSAIALTLCDAPHRPAIDLKIETEIPSEVRRSIYGEAARREVMIRPEVPTGAFSLRNSADKNCASKNQHQKNIPREAVF*
Ga0157327_106811013300012512Arabidopsis RhizosphereVTLGDASNRPAIDQKIETEIPSEVRRSIYGDAARWEVVIRAEVRLGASLRNNADENCAPENQHQKNIPHEAVF
Ga0137397_1055630613300012685Vadose Zone SoilIDQKIETEIPSEVRHSLYDEPARREVMIRPEVPSWGTSLRNSADENCAPENQHQKNIPREAVF*
Ga0157305_1009751213300012891SoilIDQKIETEIPSEVRRSIHDEPARRVVVIGPEVPWRLSLRNSADGYCAPKNQHQKNIPREAVF*
Ga0157289_1012869113300012903SoilTEIPSEVRRSIHDEKARREVVIRPEVRRWRTALRNTANENCAPENQHQKNIPREAVF*
Ga0157298_1010712123300012913SoilDLKMETDIPSKVRRSFDSEAARRVIRPEVTNTSLRKSANEHCAPENQHQKNIPN*
Ga0157310_1024668213300012916SoilEIPSEVRRSIHDEKARREVVIRPEVRRWRAALRNTANENCAPENQHQKNIPREAVF*
Ga0137407_1036503223300012930Vadose Zone SoilMGPRWQPGAIAVALREGRHGPAVDLKSETEIPSEVRRSIYGEAARREVMIRPEVPTGAFSLRNSADKNCASENQHQKNIPREAVF*
Ga0134087_1039255813300012977Grasslands SoilVTLYEGRHGPAIDLKIETEIPSEVRHSIHRQAARRVVISPEVTRTSLRNSADASCAAKNQHQKNIP
Ga0164304_1139843623300012986SoilDGQYMRSSWKPGAIAVTLCDVRHGPAIDLEIESEIPSEVRHSIHDEAARREVVVRPEVPTWGTSLHNCADENCAPKNQRQKNNAREAVF*
Ga0164304_1143743323300012986SoilGAIAVPLRHTPHRPAIDQEIETKIPSEVRRSIHDDVARREVVIRPEVPGWGASLRNTADENYAPENQYEKNIPREALF*
Ga0163162_1181749823300013306Switchgrass RhizosphereVRYGPAIDLKIESEIPSEVRHSIHDEAARWEMVIRPEVPTLRTSLRNSDDENCAPKNQHQKNIPREAVF*
Ga0157375_1009952413300013308Miscanthus RhizosphereEIKTEIPSEIRRSIDGETPRRDVRRVKVTSASLRNGANEHCASENQHQKNIREAVF*
Ga0157375_1097137213300013308Miscanthus RhizosphereEIPSEVRRSIYGDAARWEVVIRAEVGLGASLRNNADENCAPENQHQKNIPREAVF*
Ga0134079_1040699413300014166Grasslands SoilACHRLAIDLKMETEIPAEVRRSVDGEATRREVVIRPEVTSTSMRNRANEHCAPENRHQKNIPREAEF*
Ga0157376_1029989213300014969Miscanthus RhizosphereVSLGDAPNRPAIDQKIETEIPSEVRRSIYGDAARWEVVIRAEVRLGASLRNNADENCAPENQHQKNIPHEAV
Ga0132257_10028300613300015373Arabidopsis RhizospherePRVIAATLNNVRHRPAIDLKMETEIPSEVRRSIDGEAARRDMISSEVTSASLRKSAKEYCASENQHQTNLREAVF*
Ga0182034_1208189223300016371SoilAITATPYDVCHRLAVDRKIEPEIPSEVRCSIDGEAARRDVISSEVTGASLRKSAKEHCASENQHQKNLREAVF
Ga0182037_1172381313300016404SoilVATEYDISHRPAVDLKMETEIPSEVRRSIDGEATRRDVISPEVTGTSLRKSANEHCAPENQHQKNIAREAVF
Ga0182038_1062487713300016445SoilVAATVYHISHRPAVDLKMETEIPSEVRHSFDGEAARWEVTKPEVTSTCLRKSANEHCAPENQHQKNIPNEAVF
Ga0182038_1167171413300016445SoilISHRPAVDLKMETEIPSEVRCSIDSDAAGWDVISPEVTSTSLRKSANEHCASENQHQKNIPNEAVF
Ga0182038_1170175913300016445SoilKMETEIPSEVRRSIDGVATGRDVISPEVTGTSLRKSANEHCAPENQHQKNIAREAVF
Ga0184604_1003777813300018000Groundwater SedimentQQMWPSWQPGAIAVTLCDAPHGPAIDQKIETEIPSEVRHSIHDKPARRVVVIRPEVPTWALSLRNSADENCASKNQHQKNIPREAVF
Ga0184605_1024960823300018027Groundwater SedimentMWPRWKPGAIAVTQGDAPHRPAIDLKTETEIPSEVRYSIHDEPARREVIRPEVPTWRTSLRNSADENCAPKNQHQKNIPREAVF
Ga0184611_100732543300018067Groundwater SedimentMGSSWEPGAIAATLDDAPHGPAIDQKIETEIPSKVRRSIHGEQARREVVIRPEVPRGTSLRNSADENRAPENQHQKNIPREAVF
Ga0184624_1033492713300018073Groundwater SedimentRPTVDLKSETEIPSEVRHSIYGEATRREVMIRPEVPTGAFSLCNSADENCASKNQHQKNVSREAVF
Ga0184624_1037119313300018073Groundwater SedimentLGDGQQMRPSWEPGGIPATLYDARHRPAIDLKIETEIPSEVRRSIYGEPARREVVIRPEVPGTRLRKCADENCAPKNQHQKNIPREAVF
Ga0184625_1006194233300018081Groundwater SedimentMGSSWEPGAIAATLDDAPHGPAIDQKIETEIPSEVRRSIHGEQARREVVIRPEVPRGTSLRNSADENRAPENQHQKNIPREAVF
Ga0066662_1080685913300018468Grasslands SoilMGPRWEPGTIAVTLYEARHGPAIDLKMETEIPSEVRRSVDGEATRREVVIRPEVTSTSMRNRANEHCAPENRHQKNIPREAEF
Ga0066669_1024149133300018482Grasslands SoilMETEIPAEVRRSVDGEAARREVVIRPEVTSTSMRNRANEHCASENRHQKNIPREAEF
Ga0066669_1116296723300018482Grasslands SoilMETEIPAEVRRSVDGEATRREVVIRPEVTSTSMRNRANEHCAPENRHQKNIPREAEF
Ga0137408_104400523300019789Vadose Zone SoilMGPRWEPGAIAVALREGRHGPAVDLKSETEIPSEVRRSIYGEAARREVMIRPEVPTGAFSLRNSADKNCASENQHQKNIPREAVF
Ga0193720_104283123300019868SoilTLYEGRHAPAIDLKIETEIPSEVRRSIYGEAARRDVTRPEVTRPGTSLRNSADENCAPKNQHQKNIPREAVFCFHGRYCNH
Ga0193732_102190913300020012SoilAVALYEGRHGPAIDLKIETEIPSEVRRSIYGEAARRDVIRPDVTSASLRNSANEHCAPENQHQKNIPREAVF
Ga0193721_100739033300020018SoilMWPRWKPGAIAVTLRDASYRPTVDLKSETEIPSEVRRSIHDKAARREVMIRPEVPTRAFSLRNSVDENCASKNQHQKNIPREAVFRFHGRYCNH
Ga0193724_103138823300020062SoilPEVPSEVRRSIDGEAARRDVISTEVTSASLRNSADENCAPKNQRQKNIPREAVF
Ga0197907_1032634613300020069Corn, Switchgrass And Miscanthus RhizosphereVSSGDAPHRPAVDQKIETEIPSEVRRSIHDEKARREVVIRPEVRRWRTALRNTANENCAPENQHQKNIPREA
Ga0210382_1011834423300021080Groundwater SedimentMRPNWQYGAITVTLYDAPHRPAIDLKIETEIPSEVRRSVHDEAARRVVMIRPEVPTGTLSLRNSADANCAPENQHQKNIPR
Ga0222621_103372523300021510Groundwater SedimentIAVTLYAVRHGPAIDLKIETEIPSEVRRSIDDEPARREVVIRPEVPTWGTSLHNCADENCAPENQHQKNIPREAVF
Ga0126371_1141860813300021560Tropical Forest SoilEIPSEVRRPIDGEAARRDVVSSEVTGASLRKSANERCASENQHQKNLREAMF
Ga0224712_1066249413300022467Corn, Switchgrass And Miscanthus RhizosphereVSSGDAPHRPAVDQKIETEIPSEVRRSIHDEKARREVVIRPEVRRWRAALRNTANENCAPENQHQKNIPREAVF
Ga0222622_1080042013300022756Groundwater SedimentTEIPSEVRRSIDDEPARREVVIRPEVPTWGTSLQNYAAENCAPKNQRQKNIPREAVF
Ga0247670_102782223300024283SoilMETEIPSEVRRSIDGEAARRDVISSEVTSASLRKSANEHCASENQHQKDIREAVF
Ga0207666_100015193300025271Corn, Switchgrass And Miscanthus RhizosphereVPLRDAAHRPAIDQEIETEIPSEVRRSIHNDVARREVVIRPEIPGRATSLRNTADPNCAPENQHQKNIPREAVF
Ga0207697_1000191853300025315Corn, Switchgrass And Miscanthus RhizosphereVTLCDARHRPAIDLKLVTEIPSEIRRSIDGETPRRDVRRVKVTSASLRKSANEHCASENQHQKNIREAVF
Ga0207697_1006605033300025315Corn, Switchgrass And Miscanthus RhizosphereTKIPSEVRNSVDGEATRRVVMIRAEVPRWTALRDSADENRAPKNQHQKNIPREAVFCFHGRYCSH
Ga0207663_1068527813300025916Corn, Switchgrass And Miscanthus RhizosphereRPAIDQKIETEIPSEVRRSIHGEQARREVVIRPEVPRGTSLRNRANENCAPENQHQKNIPREAVF
Ga0207663_1163811513300025916Corn, Switchgrass And Miscanthus RhizosphereAPHRPAIDQKIETEIPSEVRRSIHGEQARRVVVIRPEVPRGTSLRNRADENCAPKNQHQKNIPREAVF
Ga0207652_1182746113300025921Corn RhizospherePNRPAIDQKIETEIPSEVRRSIYGDAARWEVVIRAEVRLGASLRNNADENCAPENQHQKNIPHEAVF
Ga0207670_1004069743300025936Switchgrass RhizosphereVTLCDARHRPAIDLKLVTQIPSEIRRSIDSEAPRWNVRRVEVTRASLRKSANEHCASENQHQKNIREAVF
Ga0207689_1135589023300025942Miscanthus RhizosphereVSLDDARNRPAIDQKIETEIPSEVRRSIYGDAARWEVVIRAEVRLGASLRNNADENCAPENQHQKNIPREAVF
Ga0207677_1139972513300026023Miscanthus RhizosphereTEIPSEVRRSIHDEKARREVVIRPEVRRWRTALRNAANENCAPENQHQKNIPREAVF
Ga0207702_1183900333300026078Corn RhizosphereAPHRPAVDQKIETEIPSEVRRSIHDEKARREVVIRPEVRRWRAALRNTANENCAPENQHQKNIPREAVF
Ga0209268_115084623300026314SoilMETEIPAEVRRSVDGEAARREVVIRPKVTSTSMRNRANEHCAPENRHQKNIPREAEF
Ga0209155_107020623300026316SoilMETEIPAEVRRSVDGEAARREVVIRPEVTSTSMRNRANEHCAPENRHQKNIPREAEF
Ga0179587_1020529433300026557Vadose Zone SoilPLGDAPHRPAIDQKIETEIPSEVRRSIHGEQARREVVIRPEVPTWGTCLRNSADENCAPENQHQKNIPREAVF
Ga0307279_1005634013300028709SoilPCAIAVTLGDAPNRPSIDQKIETEIPSKVRCSIHDDAARREVMIRPEVRWGTSLRNNADENCAPENQHQKNIPQEAVFCFHGR
Ga0307299_1014655323300028793SoilMRPRWEPGAIAVTLREGRHGPAIDLKSETEIPSEVRRSIHDKAARREVMIRPEVPTRAFSLRNSVDENCASKNQHQKNIPR
Ga0307302_1063195623300028814SoilHRPAIDLKTETEIPSEVRYSIHDEPARREVIRPEVPTWRTSLRNSADENCAPKNQHQKNIPREAVF
Ga0307312_1101547223300028828SoilHRPAIDQKIETEIPSEVRHSIHDKLARRVVVIRSEVPTRALSLRNSADENCASKNQHQKNIPREAVF
Ga0307286_1024956223300028876SoilTLGDAPNRPAIDQKIETDIPSKVRRSIHDDAAWRKVVIRPEVPRWGTSLRNNADKNCAPENQHQKNIPREGVF
Ga0308181_114480913300031099SoilVTLGDAPNRPAIDQKIETDIPSKVRRSIHDDAAWRKVVIRPEVPRWGTSLRNNADKNYAPENQHQKNIPQ
Ga0170819_1248754223300031469Forest SoilMGPSWEPGAIAATLYDAPHRPAIDQKIETEIPSKVRRSIHGEQARLEVVIRPEVPRGTSLRNSADENCAPENQHQKNIPREAVF
Ga0318541_1054826723300031545SoilLGGIVATEYDISHRPAVDLKMETEIPSEVRCSIDREAAKWVIRPEVTSTSLRKSANEHCAPENQHQKNIPNEAVF
Ga0306919_1124308223300031879SoilVDLKMETEIPSEVRCSIDSDAAGWDVISPEVTSTSLRKSANEHCASENQHQKNIPNEAVF
Ga0306921_1076570513300031912SoilRPAIDLKMETEIPSKVRRSIDGEAASWVIRPEVTNTSLRESANEHCAPENQHQKNIPNEAVF
Ga0306921_1262067813300031912SoilAATEYNIPHRPAIDLKMETEIPSEVRRSFDSEAARRVIRSEVSNTSLRKGANEHCASENQHQKNIAREAVF
Ga0310912_1029785533300031941SoilATQYDIPHRPAIDLKMETEIPSKVRRSIDGEAASWVIRPEVTDTSLRKSANEHCAPENQHQKNIPNEAVF
Ga0310885_1032701623300031943SoilVTLGDAPHRPAIDQKIETEIPSEVRCSIHDDAARREVVIRPDVPTGALSLRNRADENRAPENQHQKDILQEAVF
Ga0306924_1041625743300032076SoilIPSEVRRSIDGEATRRDVISPEVTGTSLRKSANEHCAPENQHQKNIAREAVF
Ga0306920_10372903913300032261SoilMETEIPSEVRRSIDGEATRRDVISPEVTGTSLRKSANEHCAPKNQHQKNIAREAVF
Ga0310810_1080854513300033412SoilVPLRHTPHRPAIDQEIETKIPSEVRRSIHDDVARREVVIRPEVPGRGTSLRNTADENCVPENQHEKNIPREALF
Ga0247830_1060481723300033551SoilMRPSWEPGGIPATLYDARHRPAIDLKIETEIPSEVRRSIYDEPARREVVIRPEVPRWGASLRNSADEDCAPKNQHHKNICEAVF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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